mRNA_F-serratus_M_contig6232.17074.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: D7G727_ECTSI (Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G727_ECTSI) HSP 1 Score: 772 bits (1994), Expect = 1.690e-271 Identity = 429/553 (77.58%), Postives = 466/553 (84.27%), Query Frame = 2
Query: 236 VILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSGMAGIGGGSMSM---SSLSPYPDMSDYGSSSSMNFGEGSGLGAGGISGGFTSSVSSLTPSVPTADPRLSKQGMKLGGPSKGRSMLESLMKEDQLVSIPSA-KPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVRSMELHDVRITIPLGSSAAPEIAAADGSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTVS 1882
V+LSA+ITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIET+TVRYVYQPIENLFLLLVTNKASNIV+DLETLRMLSKVVPDVAGGV+E+KV SK+FELVFAFDEVITTGGHKENI LQQ I+TNMEMDSHEERLH MIQDSKREAAKEEA RRAKELREK KEA LRG+ G S S Y + SDYG +S+ S G + + S P AD R+S QGMKLGG SK ++ML+SL+KED LVSIPSA K SA G++AAVPAA VV+ASVHPV+LSVEERL+CQ L+RE TLESMEVKGTLSLTANSDGANKCKVVLASTDP+G F FQTHPKVNKG+YDSAKTLASKD AKGFPVARPVGVLRWSL+TTD++ MPLTINCWPEPEGGGQMNVSMEYELVR MELHDVRI+IPLGSSA PEIAA DGS+RH +QEGTL+W+MDLLDQSN+TGSLEFNIASRD EAFFPITVTFAS QLFCDVQVAGV N E SPIQYGYTASLT +SYTVS
Sbjct: 16 VVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGVTEDKVMSKSFELVFAFDEVITTGGHKENITLQQ--------IKTNMEMDSHEERLHTMIQDSKREAAKEEADRRAKELREKAKEAQLRGSGMGXXXXXXXXXXXXXXSGSSMYTEASDYGVASTGGTXXXXXXXXXXASLGLSVPAAGPASSTPVADTRVSTQGMKLGGASKSKNMLDSLIKEDHLVSIPSASKASAGGTEAAVPAA-VVAASVHPVSLSVEERLSCQ-LTREGTLESMEVKGTLSLTANSDGANKCKVVLASTDPSGTFTFQTHPKVNKGMYDSAKTLASKDQAKGFPVARPVGVLRWSLNTTDESQMPLTINCWPEPEGGGQMNVSMEYELVRPMELHDVRISIPLGSSAVPEIAAIDGSHRHLTQEGTLLWTMDLLDQSNRTGSLEFNIASRDAEAFFPITVTFASNQLFCDVQVAGVTNTETESPIQYGYTASLTADSYTVS 558
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A835ZBZ4_9STRA (Coatomer subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ4_9STRA) HSP 1 Score: 540 bits (1390), Expect = 1.430e-180 Identity = 313/557 (56.19%), Postives = 401/557 (71.99%), Query Frame = 2
Query: 236 VILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSGMAGIGGGSMSMSSLSPYPDMSD-YGSSSSMNFGEGSGLGAGGISGGFTSSVSSLTPSVPTADPRLSKQGMKLG---GPSKGRS-MLESLMKEDQLVSIPSAKPSATGSDAAVPAATVVS--ASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGA-FAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVR-SMELHDVRITIPLGSSAAP-EIAAADG-SYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESY 1873
V+LSAAITT+NGKALLARQ+VDMSRIRIEGLLAAFPKLMGTGNKQHTFIETD+VRY+YQP+E LFLLL+TNK SNIV+DLETLRMLSKVVPDVAGGV+E+KV ++ FELVFAFDEV+T GG +E I L Q ++ N+EMDSHEERLHNMIQ+SKREAA++EA R+A+E+R++QK G S+ MAG +D YG G T++ + P + +GMKLG G +KGR+ ML+SLM E++L +P+A +A G+ A +P T + A+V+PV+L +EE+L+ L+RE TLE +EVKGTLSLTAN +GA++CK+VLA+ P A AFQTHPKVN+ LYD+++ LA KD KGFPV RPVGVLRWSL+T+D+A PLT+NCWPE EG G + VS+EY L R + ELHDV I++PLG +AAP + +ADG +YRH++ G LVW ++L+D SN +GSLEF + SRDTE FFPI + F S L+ +QV GVV+ + +PI +G +SLTTESY
Sbjct: 11 VVLSAAITTKNGKALLARQYVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDSVRYIYQPMETLFLLLITNKGSNIVEDLETLRMLSKVVPDVAGGVAEDKVAARCFELVFAFDEVLTAGGMRETIALPQ--------VKVNLEMDSHEERLHNMIQESKREAARDEAARKAQEMRQRQKALQAAGGSA-MAGXXXXXXXXXXXXXXXXAADPYGY------------------GTRTAAPAXXXXXXXXXXPSRATKGMKLGLGGGTAKGRNAMLDSLMAEEKLAPVPAA--AAGGAPAVLPEVTAAATAAAVYPVSLVMEEKLSAH-LTREGTLEQLEVKGTLSLTANDEGASRCKIVLAAGGPVPAGLAFQTHPKVNRALYDASRALALKDAGKGFPVGRPVGVLRWSLATSDEAAAPLTVNCWPEDEGNGSVAVSLEYALGRGARELHDVVISVPLGGAAAPPRVTSADGGAYRHDAAAGALVWRLELIDNSNASGSLEFTVQSRDTEGFFPIQMQFTSSLLYAQLQVGGVVSIDAEAPIPFGMVSSLTTESY 537
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A4D9DAV0_9STRA (Coatomer subunit delta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAV0_9STRA) HSP 1 Score: 499 bits (1284), Expect = 1.450e-164 Identity = 302/569 (53.08%), Postives = 396/569 (69.60%), Query Frame = 2
Query: 233 MVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGN-KQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAA---LRGTSSGMAG----IGGGSMSMSSLSPYPDMSDY-GSSSSMNFGEGSGLGAGGISGGFT---SSVSSLTPSVPTADPRLSKQGMKLGGPSKGRSMLESLMKEDQLVSIPS--AKPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTD----PTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELV-RSMELHDVRITIPLGSSAAPEIAAADGSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNS-PIQYGYTASLTTESYTV 1879
MV+LS AI T+NGKALL+RQFV+MSRIRIEGLLAAFPKL+G+G KQHTFIETDTVRYVYQPI+NLFLLL+TNKASNIV+DLETLR+LSK+VPDVAGGV+EE+V+ K FELVFAFDEV+TTGG++E++ LQQ I+TNMEMDSHEE+L MI+ SK ++AK++A R+AK ++E+ +E A L T SG+ G IGGG M DY G S + + G G A G S S+V S T S +SK GMKLG PSK SML+SL++ED L +I + A P + G+ A + P+ L+VEE++ L+R+ +++ EVKG+L+LTA ++ A KV LA+ P G FQTHPKVNK YDS + L KD +KGFPV R VGVLRWS S+TDD+ +P+T+NCWPE EG G+MN+S+EY++ +S ELH+V ++IPLG++ PE+A+ DG+YRH+ +E L+W MDL+D SN +G+LEF +A RD + FFPI V+F+S+ L+ DV V V E+ S PI Y T L+ +SY V
Sbjct: 1 MVVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEEKQHTFIETDTVRYVYQPIDNLFLLLITNKASNIVEDLETLRLLSKIVPDVAGGVTEERVSDKCFELVFAFDEVLTTGGYRESVTLQQ--------IKTNMEMDSHEEKLALMIKQSKMDSAKDQAARQAKAIKERLRELARDRLGATRSGLGGAYQGIGGGGM------------DYVGGSGAFDGQAGIGQDAFGASTPSVYAPSTVDSFTVSKTETVKTVSK-GMKLGAPSKAASMLDSLVQEDNLSNIAATRAPPLSAGAGLGEEAVSAPVIQHQPIQLAVEEKIVAH-LTRDGAIDTFEVKGSLTLTATTEAAALSKVALAAGGARPVPAG-LNFQTHPKVNKQEYDSNRVLVLKDTSKGFPVGRAVGVLRWSYSSTDDSVVPITLNCWPEEEGQGKMNISIEYQMNGQSQELHNVNVSIPLGTAEPPEVASIDGTYRHDPREQRLIWHMDLVDASNSSGALEFVVAGRDAQVFFPIIVSFSSQILYADVNVTAVTGLEDGSAPIPYSLTKLLSPDSYIV 546
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A7S2MQW5_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQW5_9STRA) HSP 1 Score: 495 bits (1274), Expect = 2.500e-163 Identity = 282/555 (50.81%), Postives = 384/555 (69.19%), Query Frame = 2
Query: 233 MVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSG-MAGIGGGSMSMSSLSPYPDMSDYGSSSSMNFGEGSGLGAGGISGGFTSSVSSLT--PSVPTADPR--LSKQGMKLGGPSKGRSMLESLMKEDQLVSIPSAKPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVRSMELHDVRITIPLGSSAAPEIAAAD-GSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTV 1879
MV+LSAA+ T+NG+ALLARQ+VDM+RIRIEGLLAAFPKLMGTG++QHTF+ETD+VRYVYQPIE L+LL++TNKASNIV+DLETLR+LSK+VP++A GV+EEK+ K FELVFAFDEV+T GGH+E+I + Q I+ N+ M+SHEE+LH MI++SK + KEEA RRAK ++E+Q+ + G SSG MAG+GGG SM+ P D + + F E +S G +S SS P ADP +K+GMKLGG SK + +++ + ED L + SAK + T A PA + HPV+L +EE++ ++RE LE ME+KGT++L AN D +KCKV+LA F +QTHPKV+K Y+ L KD KGFP + +G+LRWS++T DD+ +P++INCWPE E G MNV++E+ MELH+V+I+IPLG+S PEI + D GS++HN L+W ++L+D NKT SLEFN+A D +AFFPI+V+F S L + VA ++++EN++PIQ+G L T+SY V
Sbjct: 1 MVVLSAAVCTKNGRALLARQYVDMTRIRIEGLLAAFPKLMGTGSQQHTFLETDSVRYVYQPIETLYLLVITNKASNIVEDLETLRLLSKLVPEIAEGVTEEKILDKMFELVFAFDEVLTPGGHRESITMPQ--------IQVNLSMESHEEKLHKMIEESKVSSTKEEADRRAKTIKEQQRSSKAGGMSSGGMAGMGGGGDSMAESVPETDYT------TRPFSE--------LSSGQQTSTSSEWGYSQSPKADPEPVTAKKGMKLGGSSKKQQIMDKFVSEDNLAPL-SAKGNDTSGKAMTPATAAAPVATHPVSLLLEEKVAVT-MNREGALELMEIKGTMALVANGDEFSKCKVILAGAK-NPLFTYQTHPKVDKKAYEKENILCLKDKNKGFPKGK-LGILRWSMNTQDDSQVPISINCWPEDEDGN-MNVNVEFNAEGDMELHNVQISIPLGTSNPPEIVSMDTGSHKHNRTNEVLIWDIELIDGQNKTSSLEFNVAQDDADAFFPISVSFGSTHLKAGLDVANILSSENDAPIQFGLAKMLVTDSYQV 528
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: F0YG49_AURAN (Coatomer subunit delta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG49_AURAN) HSP 1 Score: 487 bits (1254), Expect = 1.550e-160 Identity = 275/550 (50.00%), Postives = 372/550 (67.64%), Query Frame = 2
Query: 233 MVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSGMAGIGGGSMSMSSLSPYPDMSDYGSSSSMNFGEGSGLGAGGISGGFTSSVSSLTPSVPTADPRLSKQGMKLGGPSKGRSMLESLMKEDQLVSIPSAKPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVRSMELHDVRITIPLGSSAAPEIAAADGSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTVS 1882
MV+LSA++ T+NG+ L ARQFV+M+R+R+EGLLAAFPKLMGTGNKQHTFIETD+VRYV+QP+E+++LLL+TNKASNIV+DLETLR+LSKVVP++AGG SEEK++ KAF+LVFAFDEVITTGG++E I+L+Q IRTN+EMDSHEE+LHNM++ +K ++AK++A +K ++ +Q+EA+ G G GGG +FG G G+ A + G S P +P + + MKLGG S+++ + ED + P+ PS S A+ P++L VEE+LT LS+E LES ++KGTLSLTAN +GA CKV +A FQ HPKV+K +++ + KD +KGFPV RPVGV+RWSLSTTD+A +PLTINCWPE EG G MNV++EYEL R MEL+DV I IP G APEI + DGS+ H+++E L W +D++D SNK G+LEFNI +RD + FFPI VTF SK L+ D +A V + ++P+ Y +LT +S+ ++
Sbjct: 1 MVVLSASVCTKNGRCLFARQFVEMNRLRVEGLLAAFPKLMGTGNKQHTFIETDSVRYVWQPVESIYLLLITNKASNIVEDLETLRLLSKVVPEIAGGHSEEKLSDKAFDLVFAFDEVITTGGYREAIDLRQ--------IRTNLEMDSHEEKLHNMVKKTKMDSAKDQAAHMSKVIKSRQREASKSGDDP--YGGGGG----------------------DFGGGMGMPAPPMGGESPYGESPYGAPAPPPEPVVQVKSMKLGGKKNKSSLMDKMAAEDGISIAPAFTPSKPASXXXXXXXXXXXAA-QPISLIVEEKLTVA-LSQEGALESFDLKGTLSLTANDEGAALCKVQIADKAAAPGTTFQVHPKVSKKDWEADGAVMMKDASKGFPVGRPVGVVRWSLSTTDEALVPLTINCWPEDEGDGVMNVNVEYELKRPMELYDVVIRIP-GCGNAPEIVSVDGSHTHDAKEEVLDWKLDMVDGSNKQGTLEFNINARDADDFFPIAVTFRSKSLYYDAPIASVTAIDGDAPVAYSLNKALTVDSFRIA 515
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A7S3H6H8_9STRA (Coatomer subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6H8_9STRA) HSP 1 Score: 471 bits (1212), Expect = 6.640e-154 Identity = 282/565 (49.91%), Postives = 375/565 (66.37%), Query Frame = 2
Query: 230 NMVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQ-HTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAG---GVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSG-MAGIGGGSMSMSSLSPYPDMSDYGSSSSMNFGEGSGLGAGGISGGFTSSVSSLTPSVPTADPRLSKQ------GMKLG-GPSKGRSMLESLMKEDQLVSIPSAKPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGA-FAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYEL-VRSMELHDVRITIPLGSSAAPEIAAADGSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTVS 1882
NMV+LSAA+ T+ GKAL+ARQFVD+SRIRIEG+LAAFPKLMGT KQ HTF+ET+ VRYVYQ ++NL+LLL+TN+ASNIV+DLETLR+LSKV+P+VAG ++EE V K+FEL+FA DEVITTGG++E INLQQ IRTNMEM+SHEE+LHNMI+ SK E+AK++A A+ +++KQKE G S G M GIG S S S + + GSS F V + + V TA S + GM L +K +S+ ++LM+ED+L + SA ++ SDA P V+ PVTLS+ E+++ LSRE +E E+KG+L+LTA D A C V L + F+F THPKVNK Y+ L K+ KGFP ARPVG+L+W+ S T + +PL INCWPE E GQMNVS+EY + V+ +ELHDVRI IPLG++AAP I + DGS++HN+ G LVW++DL+D SN TGSLEFN+ R +AFFPI V FAS +L+ V+V V + +P+ YG T ++++E Y ++
Sbjct: 6 NMVVLSAAVCTKGGKALVARQFVDVSRIRIEGMLAAFPKLMGTDAKQQHTFVETEAVRYVYQLLDNLYLLLITNRASNIVEDLETLRLLSKVIPNVAGVMTNLTEEHVADKSFELMFALDEVITTGGYREPINLQQ--------IRTNMEMESHEEKLHNMIKISKMESAKDQASVAARAIKDKQKEQMRMGASGGGMVGIGSNSRSEFGASGFDSSAHSGSS-------------------FADPVPAASSPVSTAQASSSSRARQPVKGMSLNPAGAKNKSVEDALMREDKLAPLISASKNSV-SDAPTPLTAAVAQ--QPVTLSIVEKVSAT-LSREGLVEMFEIKGSLTLTAADDEAALCSVQLKPASARDSVFSFNTHPKVNKAAYEKTGLLQLKEANKGFPSARPVGILKWTHSGTSEELVPLKINCWPEEESRGQMNVSIEYSMDVKGLELHDVRIVIPLGTNAAPTIVSVDGSHKHNASSGELVWTIDLIDASNTTGSLEFNVQQRSADAFFPIGVHFASPKLYSGVEVVSVNAGGSGAPVVYGLTKNMSSEEYVIN 539
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A7S3ZRB7_9STRA (Coatomer subunit delta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRB7_9STRA) HSP 1 Score: 468 bits (1204), Expect = 6.560e-153 Identity = 269/553 (48.64%), Postives = 367/553 (66.37%), Query Frame = 2
Query: 233 MVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSG--MAGIGGGSMSMSSLSPYPDMSDYGSSSSMNFGEGSGLGAGGISGGFTSSVSSLTPSVPTADPRLSKQGMKLGGPSKGRSMLESLMKEDQLVSIPSAKPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVRS-MELHDVRITIPLGSSAAPEIAAADGSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTVS 1882
MVILSAA+TT+NG+ALL+RQFVDM+R+R+EGLLAAFPKL GTGNKQHTF+ETD+VRYVYQP+E++FLLL+TNKASNIV+DLETLR+LSKVVP++AGG SE+KV+ AFELVFAFDEVITTGG++E I+++ IR N++MDSHEE+L NM++ SK +AAK++A ++ ++++Q++A G G MAG+GGG M F + ++ P P +P + QGMKLG KG+ L S M + + + ++ P +DA P A+ P+ LSVEE+LT LS+E LE+ ++KGTLSLTAN D A C++ +A F THPKV+K ++S + K AKGFPV R VGV+RW+LSTTD+ +PLTINCWPE EG GQMNV++EY RS MEL+DV I IP G ++ PEI + DG+++H+++ L W +D +D N TG+LEFNIA +D AFFPI V+F SK L+ DV ++ V + E + I Y +T +S+ ++
Sbjct: 1 MVILSAAVTTKNGRALLSRQFVDMNRLRVEGLLAAFPKLQGTGNKQHTFVETDSVRYVYQPVESIFLLLITNKASNIVEDLETLRLLSKVVPEIAGGTSEDKVSDHAFELVFAFDEVITTGGYRETIDMRT--------IRQNLDMDSHEEKLANMVKKSKLDAAKDQAKHMSQVIKQRQRDAMKTGMGGGGPMAGMGGGDMDEDDEYNXXXXXXXXXXXXXX---------------FMDAYANPAP-PPEPEPIIQVQGMKLGKKKKGKVDLMSKMAAEDGLDVRASMPQEEIADA--PXXXXXXATSQPIALSVEEKLTIS-LSQEGALEAFDLKGTLSLTANDDVAAACRLTVAHKTAAAGTTFATHPKVDKKAWESDGIVQMKGNAKGFPVGRAVGVVRWALSTTDEQQVPLTINCWPEDEGDGQMNVNIEYTAARSGMELYDVSIKIP-GCASNPEIVSVDGTHQHDARSEILDWQLDCIDSGNPTGTLEFNIAQKDEGAFFPIEVSFRSKSLYYDVPISSVESTEGHGSIGYSLDKKVTVDSFRIA 525
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A7S2RJQ4_9STRA (Coatomer subunit delta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJQ4_9STRA) HSP 1 Score: 465 bits (1197), Expect = 2.150e-151 Identity = 279/563 (49.56%), Postives = 382/563 (67.85%), Query Frame = 2
Query: 233 MVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG--NKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSGMAGIGGGSMSMSSLSPYPDMSDYGSSS----SMNFGEGSGLGAGGISGGFTSSVSSLTPSVPTADPRLSKQGMKLGGPSKGRSMLESLMKEDQLVSIPSAKPSATGSD------AAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVR-SMELHDVRITIPLGSSAAPEIAAAD-GSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTV 1879
MV+LSA++ T+NGKAL+ARQFV MSRIRIEGLLAAFPKL+G+ N QHTFIETD+VRYVYQPIENLFLL++TNKASNIV+DLETLR+LSK+VP+ GG++E+K+T K F+L+FAFDEVITTGGH+E+I LQQ I+ N+ M+SHEE+LH MI+ SK +AKEEA R+AK L+E++++ L G +S M+GI GGS + + MS G SS S + + + L + GG +S P+ +P L K+GM+LGG SK + +++ L+ ED L +PSA +A A PA V HP+ + +EE++T L+RE +ES+E KGT+ LT+N+ A +C+V++ FA+QT+PKV+K Y+ +A KD +KGFP + VGVLRWS +T DD H+P++INCWPE E G MNV++EY + R +ELH+V I IPLG+SA+P + + D G++RHN LVW ++L+D+SNK+ SLEF++ R ++AFFPI V FAS QL V VA + + E PI + S ESY V
Sbjct: 19 MVVLSASVCTKNGKALVARQFVGMSRIRIEGLLAAFPKLVGSEAKNTQHTFIETDSVRYVYQPIENLFLLIITNKASNIVEDLETLRLLSKLVPETCGGLTEDKITDKMFDLIFAFDEVITTGGHRESITLQQ--------IQVNVSMESHEEKLHKMIEQSKVSSAKEEADRKAKALQEQRRQDKLSGATS-MSGIEGGSTGEDTFAER-HMSSGGFSSAPPGSAMYADHAPLPSSASYGGVSS------PTSRRDEPVLPKKGMQLGGGSKKQQLMDKLVTEDNLTPLPSAASTAXXXXXXXXXXVATPAVEVT----HPINILLEEKIT-GALNREGAVESLETKGTMFLTSNTAEACRCQVIMTPAK-NPLFAYQTNPKVDKKAYEQEHRIALKDASKGFPQGKGVGVLRWSAATQDDEHVPISINCWPE-EDGADMNVNVEYSVDRPGLELHNVSIVIPLGTSASPNVLSVDSGTHRHNRSSEELVWEIELIDESNKSASLEFSVPQRSSDAFFPIQVRFASNQLSAGVDVANITDLEGK-PIHFSLQKSAVAESYKV 557
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A3M6VEB6_9STRA (Coatomer subunit delta n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEB6_9STRA) HSP 1 Score: 430 bits (1106), Expect = 4.030e-138 Identity = 261/565 (46.19%), Postives = 366/565 (64.78%), Query Frame = 2
Query: 230 NMVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSGMAGIGGGSMSMSSLSPYPDMSDYGSSSSMNFGEGSGLGAGGISGGFTSSVSSLTPSVPTA-----DPRLSKQG-MKLG--GPSKG-------RSMLESLMKEDQLVSIPSAKPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVRSMELHDVRITIPLGSSAAPEIAAADGSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTV 1879
N V+LSA++ TRNGKA RQFV+++RIR+EGLLAAFPKL+ +G+++HTFI+T++VRYVYQP+E+ F+L++TNK SNIV+DL T+++L+K+VPD+ +SE + K FELVF FDE+IT GGH ENIN+QQ IR NMEM+SHEE+LHNMI +SKR AAK++ R ++E+Q+E A AG+GG S + S +GSS S F +GG S F +S SS+ S PT+ +P +SK G MKLG G SKG +S ++++ ED L IP P + + V+ S P+ + VEE++T L+R+ E +EVKG++ ++ N A C++ L + G +FQTHPKV+K LYDS LA +D +K FP +R V LRWSL T D++ +PL I CWPE EG G++NVS+EY L R M L +V I IPLG S AP +A DG Y+HNS EG+L+W D + +N +G+LEF+I + +AFFPI+V+F S+ ++ DVQV V E+ SPI +G+ L+T+SY +
Sbjct: 5 NTVVLSASLLTRNGKA---RQFVEITRIRLEGLLAAFPKLLSSGSREHTFIDTESVRYVYQPLESFFVLIITNKTSNIVEDLHTIQLLAKLVPDICAPLSETSIRDKQFELVFGFDELITAGGHSENINVQQ--------IRINMEMESHEEKLHNMILESKRAAAKDDMKRHTARIKEEQRERARMER----AGLGG--------SGFGSKSSFGSSFSNAF---KSPRSGGSSDNFMNSPSSVATS-PTSYNSRPEPIMSKAGGMKLGSSGSSKGMGLGSGGKSFMDAMAAEDGLKEIP---PMSAAVEIVQKPEVAVAVSHDPIGIVVEEKMTVV-LTRDGAPEQLEVKGSMCVSVNDPSAGCCRLKLRTGGVEG-ISFQTHPKVDKKLYDSESVLALRDSSKPFPTSR-VAFLRWSLKTQDESMVPLNITCWPEEEGNGKINVSVEYSLDRDMVLDNVNIVIPLGGSDAPSVANVDGQYQHNSAEGSLLWHQDQITPANNSGTLEFSIGGNNIDAFFPISVSFFSRSVYSDVQVETVEKIEDGSPIVFGFEKLLSTDSYEI 536
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Match: A0A8K1CHB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHB9_PYTOL) HSP 1 Score: 430 bits (1106), Expect = 3.420e-137 Identity = 248/546 (45.42%), Postives = 354/546 (64.84%), Query Frame = 2
Query: 278 LLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVQDLETLRMLSKVVPDVAGGVSEEKVTSKAFELVFAFDEVITTGGHKENINLQQASKTDANDIRTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAALRGTSSGMAGIGGGSMSMSSLSPYPDMSDYGSSSSMNFGEGS-GLGAGGISGGFTSSVSSLT-PSVPT--------ADPRLSKQGMKLGGPSK--GRSMLESLMKEDQLVSIPSAKPSATGSDAAVPAATVVSASVHPVTLSVEERLTCQQLSREATLESMEVKGTLSLTANSDGANKCKVVLASTDPTGAFAFQTHPKVNKGLYDSAKTLASKDLAKGFPVARPVGVLRWSLSTTDDAHMPLTINCWPEPEGGGQMNVSMEYELVRSMELHDVRITIPLGSSAAPEIAAADGSYRHNSQEGTLVWSMDLLDQSNKTGSLEFNIASRDTEAFFPITVTFASKQLFCDVQVAGVVNAENNSPIQYGYTASLTTESYTV 1879
L+ARQFV+++RIR+EGLL AFPKL+ +G+++HTFI+T++VRYVYQP+EN F+L++TNK SNIV+DL T+++L+K+VPD+ G ++E + K FEL+F FDE+I GGH EN+NLQQ IR NMEM+SHEE+LHNMI SK+ AAK++ R ++E+Q+E A AG+GG Y + +GSS FG+ G G+ S +SS SS P+ PT A P + GMKLGG SK G+S L+++ ED L IP P + A V+ S P+ + VEE++T L+RE TLE +EVKG+L ++ N + C++ L + G FQTHPKV+K L+D L KD K FP AR V VLRWSL T D++ +PL I CWPE +GGG++NV++EY + R M L +V I IPLGS +P++A DG ++HNS EG+L+W +D +D SN +G+LEF+I +AFFP+ V+F S+ ++ DV + VV A+++SP+Q+G+ L+TE+Y +
Sbjct: 87 LVARQFVEITRIRLEGLLTAFPKLLSSGSREHTFIDTESVRYVYQPLENFFVLIITNKTSNIVEDLHTIQLLAKLVPDICGSLNESAIRDKQFELIFGFDELIAAGGHSENVNLQQ--------IRVNMEMESHEEKLHNMILQSKQAAAKDDMKRHTIRIKEEQRERARLER----AGLGG----------YAKQTGFGSSMGNAFGQSPRGGGSDSYSSPTSSSFSSSNVPTSPTSYNKPAEPAAPPIKASGMKLGGASKSTGKSFLDAMAAEDDLKEIP---PMSAPVQAVTKPEPTVTVSHDPIGVVVEEKITVV-LNREGTLEQLEVKGSLFVSVNDQASACCRLKLRQSAANG-ITFQTHPKVDKRLFDQESVLGLKDATKPFPSAR-VAVLRWSLKTQDESFLPLNIVCWPEEQGGGKINVTIEYSMDRDMVLDNVNILIPLGSRESPQVAHVDGQFQHNSNEGSLLWHLDRVDSSNNSGTLEFSIRGDSLDAFFPLAVSFFSRSVYSDVDIEAVVKADDHSPVQFGFEKLLSTENYQI 604 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6232.17074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6232.17074.1 >prot_F-serratus_M_contig6232.17074.1 ID=prot_F-serratus_M_contig6232.17074.1|Name=mRNA_F-serratus_M_contig6232.17074.1|organism=Fucus serratus male|type=polypeptide|length=551bp MVILSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGNKQHTFIback to top mRNA from alignment at F-serratus_M_contig6232:9371..23395- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6232.17074.1 ID=mRNA_F-serratus_M_contig6232.17074.1|Name=mRNA_F-serratus_M_contig6232.17074.1|organism=Fucus serratus male|type=mRNA|length=14025bp|location=Sequence derived from alignment at F-serratus_M_contig6232:9371..23395- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6232:9371..23395- >mRNA_F-serratus_M_contig6232.17074.1 ID=mRNA_F-serratus_M_contig6232.17074.1|Name=mRNA_F-serratus_M_contig6232.17074.1|organism=Fucus serratus male|type=CDS|length=3306bp|location=Sequence derived from alignment at F-serratus_M_contig6232:9371..23395- (Fucus serratus male)back to top |