mRNA_F-serratus_M_contig1509.3528.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1509.3528.1
Unique NamemRNA_F-serratus_M_contig1509.3528.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 5.110e-108
Identity = 163/269 (60.59%), Postives = 199/269 (73.98%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTGESRFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTILGSSATSTTTFGGEGEDTSMSFRF 1000
            MAR  FV LAC ++G A ALEV+TPS   I VADRTYTVEW G    RFEIDLY+CGS CMED CG+WVT+LCPYGE GCPD+EGD+D+VMPEPM S  S +GYK+RV D++DE+SMDCS++F L+ S++ P AG   G  L VTSP +GD AEA  EYTVE+DYD+G GS   RF+IDL+ ADG GDCGT+  ++CDK SIGCKD+ GDYD+ IP D   G+YKIRVG F+D+  +GCS TFTI+G            G+D SMS+ F
Sbjct:    1 MARTGFVALACAMLGAANALEVVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPM-SGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMG------------GDDESMSYDF 256
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BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 2.940e-107
Identity = 158/246 (64.23%), Postives = 191/246 (77.64%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTG-ESRFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTI 928
            M R  FV LAC ++G A AL+V TPS+G   +ADRTYTVEW GT  ++RFEIDLYYCGS CMEDDCG+WVT+LCPYGE GCPD+EGD+D+VMPEPM+ +S  +GYK+RV DI+DEE  DCS+ F LL S E P  G+ DGP L VTSP  GD+A  C EYTVE+DYD+G GS+  RF IDL+ ADG GDCGT+  ++CDK +IGCKD+ GDYD+ IPCD + GEYKIRV  F+DDS + CS TFTI
Sbjct:    1 MTRTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSG-SGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245
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BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 333 bits (855), Expect = 1.820e-105
Identity = 163/270 (60.37%), Postives = 200/270 (74.07%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTGES-RFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTILGSSATSTTTFGGEGEDTSMSFRF 1000
            M R  FV LAC ++G A ALEV+TP+ G + V+ R YTVEW GTG + RFEIDLYYC S CMED+CGEWVT+LCPYGE GCPD+EGD+D+VMPEPM S +S +GYK+RVAD++DE+S DCS+ F L+   + P A +A GP + VTSP  GD AEA  EYTVE+DYD+G GS+ GRF IDL+ A GSGDCGTF  TLCDK +IGCKD+ GDYD+ IP D   G Y IRVG F+D+S +GCSD F ILG+            +D+SMS+RF
Sbjct:    2 MVRTGFVALACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPM-SGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGA------------DDSSMSYRF 258
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BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 8.330e-102
Identity = 154/235 (65.53%), Postives = 185/235 (78.72%), Query Frame = 2 
Query:  233 IGTAGALEVITPSEGSIYVADRTYTVEWEGTGES-RFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTILG 934
            +G A ALEV+TP+EG I VA R YTVEW GTG + R+EIDLYYCGS CMED+CG+WVT+LCPYGE GCPD+EGD+D+VMPEPM S +S +GYK+RVAD++D++S DCS+ F L+   E P AG+A GP + VTSP  GD AEA  EYTVE+DYD+G GS+ GRF IDL+ A GSGDCGTF  TLCDK +IGCKD+ GDYD+ IP D   G Y IRVG F+DDS +GCSD F ILG
Sbjct:    2 LGAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPM-SGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILG 235
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BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 3.060e-97
Identity = 153/247 (61.94%), Postives = 183/247 (74.09%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTGESRFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFE-ADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTIL 931
            MAR AF  LA  ++G A ALEV++P+ G   +ADRTYTVEW GT +SRFEIDLYYCGSFCMED+CG+WVT+LCPYG  GCPD++GD+D+VMPEPM  +SS  GYK+ V D NDE SM CS  FTL+ S + P AGE  G +L VTSP DGD A A   YTVEWDY++G GS+  RF IDL+    G+GDCGT+ ATLCDK SIGC D+QGDYD+ IP D   G Y +RVGVF DD  F CS+ F I+
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSS--GYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEV-GYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244
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BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 5.020e-94
Identity = 146/247 (59.11%), Postives = 181/247 (73.28%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTGESRFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTILG 934
            MAR AF  LA  ++G A ALEV++P+ G + VAD  YTVEW G    R++IDLYYCGS CMED+CG+WVT+LCPYG+ GCPD++GD+DVVMPEPM  +SS  GYK+ V D +DE    CS  FTL+ S E P A +  G  + VTSP DGD A A  EYTVE+DYD+G GS+  RF IDL+ + GSGDCGT+  T+CDK SIGCKD+QGDYD+ IP    +G Y IRVGVF+DD  +GCSD+F I+G
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS--GYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDM-GAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVG 244
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BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 6.180e-92
Identity = 143/245 (58.37%), Postives = 176/245 (71.84%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTGESRFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTI 928
            MAR AF  +A  ++  A ALEV++P  G   +ADR YTVEW GT   RFEIDLYYC SFCM+D CG+WVT+LCPYG  GCPDS GD+D++MPEPM  +SS  GYK+ V +  DE  M CS+ FTL+ S++ P AGE  G +L VTSP DGD A A   YTVEWDY++GFGS+  RF +DL+   G+GDCGT+  TLCD+ SIGC D+QGDYD+ IP D   G Y IRVGVFDD+  + CSDTF +
Sbjct:    1 MARTAFAAVAFGMLSAANALEVVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSS--GYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEM-GYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242
[Close]
BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 2.140e-87
Identity = 134/208 (64.42%), Postives = 162/208 (77.88%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTG-ESRFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDT 814
            MAR  FV LAC ++G A AL+V TPS+G   +ADRTYTVEW GT  ++RFEIDLYYCGS CMEDDCG+WVT+LCPYGE GCPD+EGD+D+VMPEPM S +S +GYK+RV DI+DEE  DCS+ F L+ S E P  G+ DGP L VTSP  GD+A  C EYTVE+DYD+G GS   RF IDL+ ADG GDCGT+  ++CDK +IGCKD+
Sbjct:    2 MARTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPM-SGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDS 208
[Close]
BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 2.570e-77
Identity = 128/247 (51.82%), Postives = 162/247 (65.59%), Query Frame = 2 
Query:  194 MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTGESRFEIDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTILG 934
            MAR AF  LA  ++G   ALEV +P+ G + VA  + TVEW GT   RF+IDLYYCGS CMED+CG+WVT+LCPYG+ GCPD++GD+DVVMPEPM  +SS  GYK+ V D +DE  M CS  FTL+ S                                  +D+D+GFGS+  RF+IDL+ + GSGDCGT+  ++CDK SIGCKD+QGDYD+ IP D  +G Y IRVGVF+D   FGCSD+F I+G
Sbjct:    1 MARTAFAALAFGMLGAVNALEVTSPAAGDMIVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS--GYKVMVTDSSDESDMGCSGEFTLVAS-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIG 244
[Close]
BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Match: A0A6H5KR87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 7.120e-66
Identity = 113/190 (59.47%), Postives = 137/190 (72.11%), Query Frame = 2 
Query:  374 MEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSSYTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDGDMAEACMEYTVEWDYDDGFGSAAGRFNIDLFE-ADGSGDCGTFYATLCDKESIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTILGSS 940
            MEDDCG+WVT+LCPYG  GCPD++GD+D+VMPEPM  +SS  GYKI V D NDE SM CS  FTL+ S + P AGE  G +L V SP DGD+A A   YTVEWDY++G GS+  RF IDL+    G+GDCGT+ ATLCDK +IGC D+QGDYD+ IP D   G Y +RVGVF D+  F CS+ F I+  S
Sbjct:    1 MEDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSS--GYKIMVTDSNDESSMGCSGDFTLVASTDAPAAGEV-GYSLTVNSPSDGDIAMAGEVYTVEWDYNNGLGSSKDRFAIDLYTYGTGTGDCGTYVATLCDKPTIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDEIMFDCSEAFEIVNDS 187
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1509.3528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FYL2_ECTSI5.110e-10860.59EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JRG9_9PHAE2.940e-10764.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFT9_9PHAE1.820e-10560.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI46_ECTSI8.330e-10265.53EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G3F0_ECTSI3.060e-9761.94EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G3E8_ECTSI5.020e-9459.11Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JY62_9PHAE6.180e-9258.37GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
D7FH21_ECTSI2.140e-8764.42Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KP11_9PHAE2.570e-7751.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR87_9PHAE7.120e-6659.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1509contigF-serratus_M_contig1509:108833..114015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons5
Model size2428
Cds size816
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929494.7267761-UTR-F-serratus_M_contig1509:108832..1102511622929494.7267761-UTR-F-serratus_M_contig1509:108832..110251Fucus serratus maleUTRF-serratus_M_contig1509 108833..110251 -
1690962879.1399276-UTR-F-serratus_M_contig1509:108832..1102511690962879.1399276-UTR-F-serratus_M_contig1509:108832..110251Fucus serratus maleUTRF-serratus_M_contig1509 108833..110251 -
1622929494.8495972-UTR-F-serratus_M_contig1509:113822..1140151622929494.8495972-UTR-F-serratus_M_contig1509:113822..114015Fucus serratus maleUTRF-serratus_M_contig1509 113823..114015 -
1690962879.202506-UTR-F-serratus_M_contig1509:113822..1140151690962879.202506-UTR-F-serratus_M_contig1509:113822..114015Fucus serratus maleUTRF-serratus_M_contig1509 113823..114015 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929494.7599204-CDS-F-serratus_M_contig1509:110251..1104451622929494.7599204-CDS-F-serratus_M_contig1509:110251..110445Fucus serratus maleCDSF-serratus_M_contig1509 110252..110445 -
1690962879.149032-CDS-F-serratus_M_contig1509:110251..1104451690962879.149032-CDS-F-serratus_M_contig1509:110251..110445Fucus serratus maleCDSF-serratus_M_contig1509 110252..110445 -
1622929494.7801352-CDS-F-serratus_M_contig1509:110675..1108111622929494.7801352-CDS-F-serratus_M_contig1509:110675..110811Fucus serratus maleCDSF-serratus_M_contig1509 110676..110811 -
1690962879.1702104-CDS-F-serratus_M_contig1509:110675..1108111690962879.1702104-CDS-F-serratus_M_contig1509:110675..110811Fucus serratus maleCDSF-serratus_M_contig1509 110676..110811 -
1622929494.798483-CDS-F-serratus_M_contig1509:111754..1120541622929494.798483-CDS-F-serratus_M_contig1509:111754..112054Fucus serratus maleCDSF-serratus_M_contig1509 111755..112054 -
1690962879.1789212-CDS-F-serratus_M_contig1509:111754..1120541690962879.1789212-CDS-F-serratus_M_contig1509:111754..112054Fucus serratus maleCDSF-serratus_M_contig1509 111755..112054 -
1622929494.8186913-CDS-F-serratus_M_contig1509:113302..1133841622929494.8186913-CDS-F-serratus_M_contig1509:113302..113384Fucus serratus maleCDSF-serratus_M_contig1509 113303..113384 -
1690962879.1870384-CDS-F-serratus_M_contig1509:113302..1133841690962879.1870384-CDS-F-serratus_M_contig1509:113302..113384Fucus serratus maleCDSF-serratus_M_contig1509 113303..113384 -
1622929494.8340366-CDS-F-serratus_M_contig1509:113718..1138221622929494.8340366-CDS-F-serratus_M_contig1509:113718..113822Fucus serratus maleCDSF-serratus_M_contig1509 113719..113822 -
1690962879.1945949-CDS-F-serratus_M_contig1509:113718..1138221690962879.1945949-CDS-F-serratus_M_contig1509:113718..113822Fucus serratus maleCDSF-serratus_M_contig1509 113719..113822 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1509.3528.1prot_F-serratus_M_contig1509.3528.1Fucus serratus malepolypeptideF-serratus_M_contig1509 110252..113822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1509.3528.1

>prot_F-serratus_M_contig1509.3528.1 ID=prot_F-serratus_M_contig1509.3528.1|Name=mRNA_F-serratus_M_contig1509.3528.1|organism=Fucus serratus male|type=polypeptide|length=272bp
MARFAFVTLACVIIGTAGALEVITPSEGSIYVADRTYTVEWEGTGESRFE
IDLYYCGSFCMEDDCGEWVTSLCPYGETGCPDSEGDFDVVMPEPMMSSSS
YTGYKIRVADINDEESMDCSESFTLLPSDETPIAGEADGPALVVTSPMDG
DMAEACMEYTVEWDYDDGFGSAAGRFNIDLFEADGSGDCGTFYATLCDKE
SIGCKDTQGDYDIAIPCDVNTGEYKIRVGVFDDDSTFGCSDTFTILGSSA
TSTTTFGGEGEDTSMSFRFMF*
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mRNA from alignment at F-serratus_M_contig1509:108833..114015-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1509.3528.1 ID=mRNA_F-serratus_M_contig1509.3528.1|Name=mRNA_F-serratus_M_contig1509.3528.1|organism=Fucus serratus male|type=mRNA|length=5183bp|location=Sequence derived from alignment at F-serratus_M_contig1509:108833..114015- (Fucus serratus male)
ACTCACTCCTCCCCTTCCTCACTCGCCCTGCCCCCACCCCTCGGCACCTA
CCGTCGAAGCGATCCGAGCGTGCGCAAGCGAGAAGAAGCAAGGGACGCCG
TTTTCCAAACTTGAAACCGATCTTCGACGAAGACTTCCATCAACTCTGCT
CATAACACTCGCTTCGGGCAGATTTGTACAAAGTTTGTAAAAAATGGCTC
GGTTTGCCTTCGTCACACTTGCTTGCGTCATCATCGGAACCGCGGGAGCT
CTCGAGGTCATAACGCCAAGCGAAGGAAGCATATACGTCGCTGACAGGTG
AGTTTTCTCTATTGGGTGAAGTGAGCAACGCTCAAACTCAGGCCCTTCGT
CGTAGAGAGCCTGGTCGAAAAGGTTTTCAATTAATGTCGCTCTGTCTGAT
CTATCCTCGTCTTTCGTCCTAGGCTATCCTATCGAGTCGACCTATCGAGT
CGATAACATTTTGCTGCATTTTTCGTCGCCGCTTGGTTCCTTCCCTGCGA
GCTTCTATTTTTCCCTCGCTGCCCTAGATCCATCTTCCATTGATTTTTGT
GAGGGTCACGATAATACTGCTACACGCACAACTGACTTACTTATCTTGTG
CTGAATTGCCGAAAACCGTAACCGGAAACAGAACGTACACGGTGGAGTGG
GAGGGCACCGGAGAGAGCCGGTTCGAGATTGATCTGTACTATTGTGGCTC
TTTCTGTATGGAGGTGAGAGCGTGGCACTTTTGTGGGTGTTTTTTTATTA
GAGCGAGCAAGCAAGCCGTCGCGCGCTTATGATCTCGACCTCCTCCTACG
TCGTTGATGCCCGATGGGTTCATGACCAACACACCCTTCTCCGGCACACT
TTTGTCTCGTTTTTTCCCTCTCTTTCGTCGAATTACCCGAAGGATGAAGA
AGCTATTAGCAATAATAGTAATAAGTTAATAGTGATATACTGGTATGTCT
AATAATTTCAATACTCCGGTCGCCCCAGTAGCAGCTCAGTTGGTAACCTT
GTAACCTTCTGACACGTTTGGGAATGAGTTCGAATCCCGGTAACTGGGGC
CCTTTTTTCTCACTAAAAAAAATAGTAAAAATAAAAATGCCTACAAGAAG
TGGAGAACAATTAAATAAATCGTTATGTTACACAAAATTCGTCGACGAGG
GGAAAGGCATGCACCGCAGAAGGAAGCAGGTGGATCAGTAACAAGTCTTG
TGTGACACTTCTGGTGCATCCAACGAACCTGACCTCCAGAAGAAATAGGA
AAAAACCACAACACCGTCTGTATTACGAGAATTATGCTGTTGAGAAAGAA
AAATCTGGAAGCATTCTTCGAGCATCCATAAGACTGGGGGGAAAATTGTC
AGAACGTTCATGTGGGAACATAGGCTGCAAATACAAAAACTCTTCGAAGC
ATTTCATATGTTTGCATAGGGTCAACAGTACAGTGCCAGGGAGAAACTTA
ACGTAATTACTGCTGACTACTTCCATTATTAATAGTCGCCCTGCTGAAGG
GATAACAAAACATTAGCAAAAAATCACTCAAAACCTGGATGATACTGGTT
CATTTTGTTACATTGAGTCTGGGATCGGATGGAGGTGTCAAGTGTATTTT
TTATTTCTGGTGATTGTATCAGGTGGATCGAACTGCTATGATAAAAAGAC
TAATTTTCATGGAGTGATTGATTTCTCACATAATAAGCGCATGTCAAAAA
TCCAGCCCGTGGTCACAAGGTTTTTGATTTTTCCTCTCCCTACAAAGAGA
AGCCGGAAATAATTCAAAAAAAAATAGTGCAACTCTTGGTGCGCAATTAG
TGGTGCTACAATTCTGTACTTTTCACAGTTTTTTTCTCAGTAAACTCCTT
CAATGCTCTCCCTAAATTTTATGCAATCGCTCCGATGGCGACATATCCCA
CTTAACATATACACCCGTTTTCGTGAAACCTCTTGCGACTACCTCATCTC
CTTCCCTAAAGGACGACTGCGGTGAGTGGGTCACCAGCCTGTGTCCCTAC
GGCGAGACTGGATGTCCGGACTCAGAGGGCGACTTCGACGTCGTTATGCC
CGAGCCCATGATGAGTAGTTCATCGTACACAGGCTATAAGATCCGTGTGG
CGGACATCAACGACGAGGAGAGCATGGATTGTTCCGAGTCATTCACCCTC
CTGCCTTCGGACGAAACTCCTATTGCCGGCGAAGCGGATGGACCCGCCCT
TGTTGTGACCTCGCCCATGGATGGTGACATGGCTGAGGCGTGCATGGAAT
ACACTGTAGAGGTAAGCTTGTCGACTGGGCCAGTGGGTCACGCTCCGCAG
GTTTTACGCTTCCTTTACGATAGCAAATTTCTCATCATTGTTTCGTCTTT
ACTGGGTACAGTACCGGGGTATCGTTTAGGCCCGATCGGTAAAAATATGA
AAAACACCGAGGACAAGTTTTGCTTTAAAATACGGATGATGCTCTTGATC
GACTTTTCCATGTAACACCAGCAGGATTGGCAGCATTTATCACCCGGTTG
TCAAGCCCCGGCGGGCATGTCATATAAAGTATATAGTATAATAGTAAAAA
TTGTCAGTTTTCCTAATTCTGGCATCCGTAGTAGTGAAAACGTCGTAAGT
AAAATTCCACCATGGGTTGACGAGGTGCAAGTATGAAGTGGACACGTTAA
AAGTGTTGGAAGGGAAGGAATGCGGAAATTCGAACGCGAGAAAAGTACGT
TAAGGTCCATCGGTCGTAGGGGAGATACAATCCAACGATAGGGAGGGGGA
GGGGATGGCCATAATATGTCCCCTTTTCCGGAGGGGACGTCATCAAAAGA
TCCCCTCCCGGGAATACATTTGACAAACCCCTGCTGGAATGAGATTAGTC
TGGGGGAAGATTGTCCATCCGCTGACGGGATATTATATCCCACACCCCGG
AGAAGCGCTTTTGGCCACAACACCCCTCATTCAATAGGGGGTATTTTCCC
ACCATCCCCTTTAAATATTTATACGGTATATGGCGTTAACCTACAACAGT
TGAAGGGTCCTCGTGAAAAGAAATATATGGGCCATTTTAATCTCACGGGG
TGGTCACCAACTTTACGCCGGGATCGATTCACTCTGCATTTTGTAAGTAC
TGTAATGCCTCATATCTGGTTTGACGACTGTTGGCGGTATGTGTACGTGC
GTATCACGATCGTCGCTCCCTGCCCAACGCACGACTACCCATTATTTCTT
GCAGTGGGACTACGACGACGGATTCGGTTCAGCTGCAGGCCGCTTCAACA
TCGACCTGTTCGAGGCTGACGGCTCAGGAGACTGCGGGACTTTCTACGCT
ACGCTCTGCGACAAGGAGTCTATCGGTTGCAAGGACACACGTGAGTCCGC
TATCAACCAGCACCTTTATATTCAACATGCACGTGGTACTTAACAAGTGT
TTGATGCTTACTTTCAGACTCGAGTTCTTAGACAACAGCAGCTGCGGTTG
TTAGTAAATTTCTCGAACGCCGGTTGTAAAGAAAAAATGAGCGCTTCTTT
GCCAGAGCTCCCCTGCTGATGCGACCCCGGCACCGCCATGGTTCGCGCGT
AATTTTTTCGCCTGTCGCAGAGGGTGACTACGACATTGCTATCCCATGCG
ACGTCAACACGGGAGAGTACAAGATCCGAGTTGGAGTCTTCGACGACGAC
TCCACATTCGGCTGCTCGGACACGTTTACCATCTTGGGTAGCTCGGCGAC
TTCGACCACGACCTTCGGTGGGGAGGGCGAGGACACGAGCATGTCTTTCA
GATTCATGTTTTAAGGCCTTGCGGTGAACGGACCAAAGGAACCAGCAACC
AGTTTTGCGAAACCAATAAAGATTTGTAAGACCCTGTAATTGTTGCGTTC
CCGGGGGAAAAGCCAATTCCGCCTATCATTTGCCCCACCGGTACGGACGG
GTAGAGAGGTCCTTCCGTTTTCACATGTACCATTGGGTCATTGGGTTACG
CAAGAGCAACGTTTTCTCGCCTTGGCGAAGTTGTTTTCTGAGTATAGTAT
CCATCGTGCGCCCGAGGTGTTTAAATGCTCTCTCGGATGTAACAAGGAGG
CGGGGTGTGATGGAAGAGTTGAATAGTTGTTCTGGTCGAAACCACTCGTT
GCCGACGCCACTTATCTTTCTAGGTCGATACCTGGTATCACTTTACCGCA
GTACTAAAAAGTGTAACCGGTAGTCCTCGTTGCTAAAGCAACTAGAGCTA
TATTTTCACGTCAGGGCTCCCCCTGAGGCTCAAAATGTGCGCTTATATTA
ATGGATAATAGTTCTAATACTAAGCATATTTTGGGATAGTACTGTTCTCG
CTGGAATATATATATATTAATATACTAATATTAATGTATTTTAGTTTGCC
TGCTAGCTTTCCTTTGGGTCAGGCACTTTGGTTTTGCTCCCTCCATTCTC
GTTGTGTTGTATCCACATTTTTCTTCCTCGTCGTAAGTTATCGTACCGTG
GTTTTATTTCAAGATTATCATCTGTAAAATGAGGCAAGCGAGCGCCACCA
TCTCATTCGTGGATGGTTTTGTCCGCCAAGCATCGCGAAGACAACTTAGC
TGAGGATTTGACATAGCTGTGCACCGAGTGTCATCCCTTGAAAATTGTTT
AGATGTTTTATGTAAGTTCGCAATAAGGTACCTATATCATTTGATACCCT
CTTAAAGGGTCCACTATGTAGCGGGTATCACTACTGGAGGGACGGGTGAT
AAAAGTAGTTGGAAGGGAAGAGTACGTTTCGCGCTACTAAATGTAGATCG
AGTCGTAGCGTGGTCGACTGTTTCGTTTGAGACTTGGGTCGTTACTGGTG
ATGTGATAATAAAGAGACGGCCGAGACTCATGGGAGCAGATGCACCGGAA
AGCATTACTGCGCACTTCAGCCCCGCCCTCCCGTTTTTCCTTGGTGCAGT
TCGTATTTTTAGCGGTGTTCGCCAATCGACGATCGGGGCCGCAAGCAACG
GGTACCTCGCCGCGATAAGGCCCTGCTCCAACGTGGGCGGGAGTTTTTTC
GGTCCTTCTCGAGGGGATATACGTTCGTGTGAATGTTCCCAGAGAACCAG
CAAACAAGCATGGGTCTCCTCGTGTTCGTAACGAATGCACTGTATTTTGT
ATTTCAACACCAAAATTTTCAACTCGGGTAACGTTCATGTTTATCTTATT
GCCCGCTATCAAATGAACTTGACTATGAGAGGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1509:108833..114015-

>mRNA_F-serratus_M_contig1509.3528.1 ID=mRNA_F-serratus_M_contig1509.3528.1|Name=mRNA_F-serratus_M_contig1509.3528.1|organism=Fucus serratus male|type=CDS|length=1632bp|location=Sequence derived from alignment at F-serratus_M_contig1509:108833..114015- (Fucus serratus male)
ATGGCTCGGTTTGCCTTCGTCACACTTGCTTGCGTCATCATCGGAACCGC
GGGAGCTCTCGAGGTCATAACGCCAAGCGAAGGAAGCATATACGTCGCTG
ACAGATGGCTCGGTTTGCCTTCGTCACACTTGCTTGCGTCATCATCGGAA
CCGCGGGAGCTCTCGAGGTCATAACGCCAAGCGAAGGAAGCATATACGTC
GCTGACAGAACGTACACGGTGGAGTGGGAGGGCACCGGAGAGAGCCGGTT
CGAGATTGATCTGTACTATTGTGGCTCTTTCTGTATGGAGAACGTACACG
GTGGAGTGGGAGGGCACCGGAGAGAGCCGGTTCGAGATTGATCTGTACTA
TTGTGGCTCTTTCTGTATGGAGGACGACTGCGGTGAGTGGGTCACCAGCC
TGTGTCCCTACGGCGAGACTGGATGTCCGGACTCAGAGGGCGACTTCGAC
GTCGTTATGCCCGAGCCCATGATGAGTAGTTCATCGTACACAGGCTATAA
GATCCGTGTGGCGGACATCAACGACGAGGAGAGCATGGATTGTTCCGAGT
CATTCACCCTCCTGCCTTCGGACGAAACTCCTATTGCCGGCGAAGCGGAT
GGACCCGCCCTTGTTGTGACCTCGCCCATGGATGGTGACATGGCTGAGGC
GTGCATGGAATACACTGTAGAGGACGACTGCGGTGAGTGGGTCACCAGCC
TGTGTCCCTACGGCGAGACTGGATGTCCGGACTCAGAGGGCGACTTCGAC
GTCGTTATGCCCGAGCCCATGATGAGTAGTTCATCGTACACAGGCTATAA
GATCCGTGTGGCGGACATCAACGACGAGGAGAGCATGGATTGTTCCGAGT
CATTCACCCTCCTGCCTTCGGACGAAACTCCTATTGCCGGCGAAGCGGAT
GGACCCGCCCTTGTTGTGACCTCGCCCATGGATGGTGACATGGCTGAGGC
GTGCATGGAATACACTGTAGAGTGGGACTACGACGACGGATTCGGTTCAG
CTGCAGGCCGCTTCAACATCGACCTGTTCGAGGCTGACGGCTCAGGAGAC
TGCGGGACTTTCTACGCTACGCTCTGCGACAAGGAGTCTATCGGTTGCAA
GGACACACTGGGACTACGACGACGGATTCGGTTCAGCTGCAGGCCGCTTC
AACATCGACCTGTTCGAGGCTGACGGCTCAGGAGACTGCGGGACTTTCTA
CGCTACGCTCTGCGACAAGGAGTCTATCGGTTGCAAGGACACACAGGGTG
ACTACGACATTGCTATCCCATGCGACGTCAACACGGGAGAGTACAAGATC
CGAGTTGGAGTCTTCGACGACGACTCCACATTCGGCTGCTCGGACACGTT
TACCATCTTGGGTAGCTCGGCGACTTCGACCACGACCTTCGGTGGGGAGG
GCGAGGACACGAGCATGTCTTTCAGATTCATGTTTTAAAGGGTGACTACG
ACATTGCTATCCCATGCGACGTCAACACGGGAGAGTACAAGATCCGAGTT
GGAGTCTTCGACGACGACTCCACATTCGGCTGCTCGGACACGTTTACCAT
CTTGGGTAGCTCGGCGACTTCGACCACGACCTTCGGTGGGGAGGGCGAGG
ACACGAGCATGTCTTTCAGATTCATGTTTTAA
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