mRNA_F-serratus_M_contig150.3478.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig150.3478.1
Unique NamemRNA_F-serratus_M_contig150.3478.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: D7FIP2_ECTSI (Pre-mRNA-splicing factor 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP2_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 3.240e-144
Identity = 312/450 (69.33%), Postives = 337/450 (74.89%), Query Frame = 1
Query:  139 MDLLKAELERKRQRTSELVAKAGGEKGGRRFVRRGEAVRLEKQEREQKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKVSASTRNETVQESTAASEDGKAAKEAPTKAETKISESGEKVSEREVKIRLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQA--------------SSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKVR 1446
            MDLLKAELERK+QRTSELVAKAGGEKGGRRFVRRGEA RLEK+ER + QA        XXXXXXXXXXXXXXXXXXX                                     ++  E V  +E K RLRA+ L +T+FGETQAQR ARLL AEE+KGHH DDF L DGHNVNNEFLGNV +DLTG HL+ ATGR++E A GDGK  D  XXXXXXXXXXX                 + A  + +G XXXXXXXXXXXXXXXXXX          D      G +G VKEMER+KLVR+FFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLF+LCKQKALPDGI+NNLV MIN+MKEGEFV+AND+YILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKR DIAPSKKVR
Sbjct:    1 MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEAARLEKEERLKNQADLIRLREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQEDE-VPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSSDLTGSHLDAATGRNDETAAGDGKAGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGAADKGDGVXXXXXXXXXXXXXXXXXXE---------DAADKEAGLDGEVKEMERNKLVRTFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKVR 440          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: A0A836CGW5_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW5_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.820e-71
Identity = 115/154 (74.68%), Postives = 139/154 (90.26%), Query Frame = 1
Query:  982 HKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            +  VR FF+ LLK+WE DLNARP+ VK ++QG+ +T+TQKQ+KDY+RP+F+LCKQ AL  GI+ NLV M+N+MKEGEFVKA+DVY+LTAIGNAPWPIGLTMVGIHERSGRE+I S+NVAHIMNNEAQRKYLVS+KRLMT+LQ+KRTD+ PSKKV
Sbjct:   82 YTYVRRFFKTLLKQWEEDLNARPEQVKGSIQGRRDTRTQKQSKDYLRPMFKLCKQHALNPGILANLVKMVNFMKEGEFVKAHDVYMLTAIGNAPWPIGLTMVGIHERSGREKIESRNVAHIMNNEAQRKYLVSIKRLMTWLQEKRTDVPPSKKV 235          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: A0A7S2S6W9_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6W9_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.290e-65
Identity = 217/442 (49.10%), Postives = 263/442 (59.50%), Query Frame = 1
Query:  133 EIMDLLKAELERKRQRTSELVAKAGGEKGGRRFVRRGEAVRLEKQEREQKQAXXXXXXXXXXXXXXXXXXXXXXXXXXX--RGKVSASTRNETVQESTAASEDGKAAKEAPTKAETKISESGEKVSER---EVKIRLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            E M+ LKAEL  +R +T EL AK G   GGR+FVRRG+   LE++E  ++         XXXXXXX               R +V  S   +  +E+ A   +G AA E            GE+V +    EVK RLR+MG VV+ FGET   R  RL   EEE     DDF +  GH+  N FL     D   R   V   RDE             XXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXX               ++  +LVR +F+GLL++WEM LNARPDH KRT QGK++TKTQKQ KDY+RPLF+LCK K +P  I+ NL  MI + KEGEFVKAND YI TAIGNA WPIG+T+VGIH+RS  +++    VAH+MNNE QRKYL SVKRL+ + Q++R D+ PSKKV
Sbjct:    2 EAMEALKAELSARRSKTEELKAKTGN--GGRKFVRRGDIAALEQKEARERTEDFERRRQXXXXXXXDDRRGGAELHERLIKRARVDRSADADAAEEAVA---EGGAAAE------------GERVVDLPPDEVKSRLRSMGQVVSFFGETDTDRYLRLRKIEEEGVTGDDDFRMHGGHDTRNVFL-----DQDSRRSGVE--RDEXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAPVDDFQLVRDYFKGLLRDWEMQLNARPDHEKRTAQGKIDTKTQKQCKDYIRPLFKLCKHKEVPADILYNLKRMIMFAKEGEFVKANDAYIQTAIGNAAWPIGITLVGIHQRSAHDKVQVGQVAHVMNNEMQRKYLQSVKRLIRFEQNRRVDVPPSKKV 414          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: A0A6U3R6S4_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R6S4_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.030e-64
Identity = 172/438 (39.27%), Postives = 230/438 (52.51%), Query Frame = 1
Query:  139 MDLLKAELERKRQRTSELVAKAGGEKGGRRFVRRGEAVRLEKQEREQKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKVSASTRNETVQESTAASEDGKAAKEAPTKAETKISESGEKVSEREVKIRLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEME---RHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            MD LKAE+ERKR+R  EL+     + G ++F RR +    E++ERE K+                              +   ST    + +  A+++D    ++ P   +  I E         VKIRLR M  VVT FGET A+RLARL   E E     +DF ++ GH+  N FL     D   R                   A  DXXXXXXXXX  +ASS + ++A                               +  A+        KE +    H+L++ +F+GL + WEMDLNAR + VKRT QGK+ETKTQKQ KDY+RPLF+LCK+K +P  I+ NL  ++   ++GEFV AND YI TAIGN+ WPIG+T+VGIH+RS  + +    VAH+MNNE QRKYL SVKRL+ Y Q +R D+APSKKV
Sbjct:    1 MDALKAEIERKRKRKEELLPHLASDTGPKKFFRRCDLEAAEQRERETKRQDFEKTRALNVRQHDENRRGGAELNEQLLRRKGQSTSRSNLGDPAASAQDN--GRDDPPLMDLPIDE---------VKIRLRDMNQVVTYFGETDAERLARLRKIEVEGVDQENDFAISGGHDTRNVFL-----DQDSR-----------------SNALDDXXXXXXXXXTPKASSKSGKRAPN-FTSGMDGKALSTELALIDETPKKKPNKQERVALEEKERAATKEQQVVNDHRLIKDYFKGLTRSWEMDLNARSEQVKRTAQGKIETKTQKQCKDYIRPLFKLCKKKTVPADILFNLKKIMECCQKGEFVMANDAYIQTAIGNSAWPIGITLVGIHQRSAHDGLQVGKVAHVMNNEMQRKYLQSVKRLIAYEQKRRPDVAPSKKV 404          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: A0A7S3HBW2_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBW2_9STRA)

HSP 1 Score: 223 bits (567), Expect = 3.940e-63
Identity = 174/440 (39.55%), Postives = 231/440 (52.50%), Query Frame = 1
Query:  136 IMDLLKAELERKRQRTSELVAKAGGEKG-GRRFVRRGEAVRLEKQEREQKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKVSASTRNETVQESTAASEDGKAAKEAPTKAETK---ISESGEKVSEREVKIRLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            IMD LKAE+ERKR+   ++ +K GG++  G +FVR G+ VR+E+++ + KQA                           R K +     + V           A +  PT + +K   + +    +S  EVKIRLR +   +T+F ET  +R+ RL+         HDD  +  G N++ +                    +EEEA     EAD               +  +      A   XXXXXXXXXXX               +          ++ +   K+V  FFR L K+WE DLN R D  KRT  GK ETKTQKQ KDY+RPLFR+CK+K +P  I++ LV M+ + +EG F+ AND YI TAIGN+ WPIGLTMVGIHERSGRE+IS+  VAHIMNNE QRKYL S+KRLMTY Q KRTD+APS K+
Sbjct:   17 IMDFLKAEIERKRKMNEDIRSKTGGDQSNGLKFVRYGDRVRIEEEQLQAKQAALDEE----------------------RAKRARVEEIKVV-----------AKENLPTNSTSKPVDLEKQYALLSVNEVKIRLRRLRQPITLFAETNTERVQRLVEVVSGDQEEHDDIKV--GKNLSED--------------------EEEEAE---LEADDQADAAYDRRSTNSGAQRSAMNQNNAQSTXXXXXXXXXXXDKKKGPEWDPNVHFSK----------IEGLSMEKIVYKFFRALTKQWEADLNQREDWAKRTAAGKKETKTQKQCKDYIRPLFRMCKKKEVPFDILDKLVLMVKHCEEGNFLAANDQYIRTAIGNSAWPIGLTMVGIHERSGREKISTSKVAHIMNNELQRKYLTSIKRLMTYAQTKRTDVAPSMKL 388          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: A0A2D4CCV0_PYTIN (Pre-mRNA-splicing factor 18 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCV0_PYTIN)

HSP 1 Score: 213 bits (541), Expect = 1.890e-59
Identity = 130/311 (41.80%), Postives = 178/311 (57.23%), Query Frame = 1
Query:  511 EVKIRLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            E+K RLR +G  VT+FGET  QR+ RL  AE +     ++  L +GH++ N+F+G+               RD++E  G  ++   D            +++    + +G                             D  AV+       KE+E   LV  FF+ +L  WE DL  RPDHVKRT QGKL TKT KQ KDY+RPLF+LCK++ +P  I+ NLV+++ + + GEFV+AND YI  AIGNA WPIG+TMVGIHER+GRE+I++   AH+MNNEAQRKY+ SVKRL++Y Q     + PSKKV
Sbjct:  121 EMKRRLRDLGHPVTLFGETMRQRMQRLRRAEHDAASRREE-ELGEGHDIRNQFVGHQ--------------RDDDEHEGPSRDDVEDEATVPPEGRAGDSAAGLAAREDGTD---------------------------DPHAVD------EKELEDDVLVYRFFKSMLLRWEQDLADRPDHVKRTAQGKLATKTMKQCKDYIRPLFKLCKRRQVPADILPNLVEIVRFCRMGEFVRANDAYIRLAIGNAAWPIGVTMVGIHERTGREKINANKQAHVMNNEAQRKYITSVKRLISYAQSI-ASVLPSKKV 382          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: H3GWX1_PHYRM (Pre-mRNA-splicing factor 18 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWX1_PHYRM)

HSP 1 Score: 208 bits (530), Expect = 2.280e-58
Identity = 128/308 (41.56%), Postives = 173/308 (56.17%), Query Frame = 1
Query:  523 RLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATG-DGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            RLR +   +T+FGE    R+ RL  AE +    H+D +L  GH++ N F+G  G +   R  + A   +E EA    G+++ S                +A  QAE                                            E +  K+V  FF+G+L+ WE DL +RPDHVKRT QGK+  KT KQ KDY+RPLF+LCKQ+ +P  I+  LVD++ + ++GEFV AND YI  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNE+QRKYL SVKRLM+Y Q   +++ PSK+V
Sbjct:   91 RLRELAEPITLFGEDMKARMVRLRRAEIDAATRHED-DLGAGHDIRNRFVGGDGGEQRDRADDAAEDAEEFEAEDRSGRKSRS-------------KKEDADAQAE--------------------------------------------EQDADKIVYKFFKGMLQRWEKDLASRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKQRQVPPDILPKLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQSV-SNVLPSKRV 339          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: A0A5D6YA39_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YA39_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.750e-57
Identity = 136/311 (43.73%), Postives = 174/311 (55.95%), Query Frame = 1
Query:  511 EVKIRLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            E+K RLR  G  +T+FGE+   R+ RL  AE +     +D  L  GH   + F G   A     H   A G             + DXXXXXX     +A  +    A G                              +G  N  +     E +  KLV  FF+  L+ WE DL ARPDHVKRT QGK+ TKT KQ KDY+RPLF+LCKQ+ +P  I+ NLV+++ + ++GEFV AND YI  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNEAQRKYL SVKRL++Y Q   +++ PSKKV
Sbjct:  113 EMKRRLREFGEPITLFGESARARVDRLRRAEHDAASWQED-ELEGGHRTRSRFAGEQAAQAA-EHAEDAAG------------FEGDXXXXXXSGGTQRAGGHGRDSAHGTSHHKRKAAKRAPTAL--------------DGDANDDDXDARDERDLDKLVYRFFKAKLQAWERDLAARPDHVKRTAQGKIATKTMKQCKDYIRPLFKLCKQRQVPPDILPNLVEIVRFCRQGEFVLANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNEAQRKYLTSVKRLVSYAQSV-SNVLPSKKV 394          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: A0A3M6VSA3_9STRA (Pre-mRNA-splicing factor 18 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSA3_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.790e-57
Identity = 128/307 (41.69%), Postives = 173/307 (56.35%), Query Frame = 1
Query:  523 RLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            RLR +G  +T+F E    R+ RL   E +    HDD  L  GH++ N F+G +G           T   +EEA    ++A+              +S N  ++ +G     XXXX                                  E +  K+V  FF+G+L++WE DL  RPDHVKRT QGK+  +T KQ KDY+RPLF+LCKQ+ +P  I+  LVD++ + ++GEFV AND YI  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNE+QRKYL SVKRLM+Y Q   + + PSK+V
Sbjct:   94 RLRELGEPITLFNENLEDRMTRLRRLEMDAATRHDD-ELGAGHDIRNRFVGGMG-----------TNDQKEEAADAAEDAEE----------FETSSDNHKKKNDGKTIEEXXXX--------------------------------XXESDADKMVYRFFKGMLQKWEKDLTCRPDHVKRTAQGKIAVQTMKQCKDYIRPLFKLCKQRQVPSDILPKLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQSV-SSVLPSKRV 345          
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Match: D0NFF0_PHYIT (Pre-mRNA-splicing factor 18 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFF0_PHYIT)

HSP 1 Score: 204 bits (518), Expect = 1.650e-56
Identity = 128/325 (39.38%), Postives = 178/325 (54.77%), Query Frame = 1
Query:  472 TKISESGEKV-SEREVKIRLRAMGLVVTMFGETQAQRLARLLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEEATGDGKEADSDXXXXXXXXXXXQASSNAPRQAEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDMINYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKV 1443
            T++ E  + V S  +++ RLR +G  +T+FGE+   R+ RL  AE +    H+   L  GH++ N F+G  G    G H             GD K+   D             + +  +                                       GG N   +E +  K+V  FF+G+L+ WE DL +RPDHVKRT QGK+  KT KQ KDY+RPLF+LCK + +P  I+  LV+++ + ++GEFV AND YI  AIGNA WPIG+TMVGIHER+GRE+I+S   AH+MNNE+QRKYL SVKRLM+Y Q   +++ PSK+V
Sbjct:   80 TQVKEESQAVLSWPDLRRRLRELGEPITLFGESMKDRMTRLRRAEMDAVTKHE-VELGAGHDIRNRFVGGDG----GVH-------------GDQKDTADDAAEDAEEFDIADTAEDGGKSK------------------------------------TGGGNEEDEEKDADKMVYRFFKGMLQRWEKDLASRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPSDILPILVEIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQSI-SNVLPSKRV 349          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig150.3478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP2_ECTSI3.240e-14469.33Pre-mRNA-splicing factor 18 n=2 Tax=Ectocarpus Tax... [more]
A0A836CGW5_9STRA1.820e-7174.68Pre-mRNA-splicing factor 18 n=1 Tax=Tribonema minu... [more]
A0A7S2S6W9_9STRA1.290e-6549.10Pre-mRNA-splicing factor 18 n=1 Tax=Rhizochromulin... [more]
A0A6U3R6S4_9STRA1.030e-6439.27Pre-mRNA-splicing factor 18 n=1 Tax=Dictyocha spec... [more]
A0A7S3HBW2_9STRA3.940e-6339.55Pre-mRNA-splicing factor 18 n=1 Tax=Spumella elong... [more]
A0A2D4CCV0_PYTIN1.890e-5941.80Pre-mRNA-splicing factor 18 n=1 Tax=Pythium insidi... [more]
H3GWX1_PHYRM2.280e-5841.56Pre-mRNA-splicing factor 18 n=1 Tax=Phytophthora r... [more]
A0A5D6YA39_9STRA2.750e-5743.73Pre-mRNA-splicing factor 18 n=1 Tax=Pythium brassi... [more]
A0A3M6VSA3_9STRA2.790e-5741.69Pre-mRNA-splicing factor 18 n=2 Tax=Peronospora ef... [more]
D0NFF0_PHYIT1.650e-5639.38Pre-mRNA-splicing factor 18 n=2 Tax=Phytophthora i... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig150contigF-serratus_M_contig150:150843..156506 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score445.3
Seed ortholog evalue3.3e-122
Seed eggNOG ortholog2880.D7FIP2
Preferred namePRPF18
KEGG koko:K10738,ko:K12817,ko:K20792
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0000350,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0000956,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005682,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008298,GO:0008380,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031324,GO:0032268,GO:0032269,GO:0032991,GO:0033036,GO:0034622,GO:0034641,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046540,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051246,GO:0051248,GO:0051641,GO:0060255,GO:0065003,GO:0065007,GO:0070727,GO:0071020,GO:0071021,GO:0071025,GO:0071027,GO:0071028,GO:0071030,GO:0071033,GO:0071048,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901361,GO:1901575,GO:1990904
EggNOG free text desc.nuclear retention of unspliced pre-mRNA at the site of transcription
EggNOG OGsKOG2808@1,KOG2808@2759
Ec32 ortholog descriptionPrp18
Ec32 orthologEc-27_000510.1
EC3.6.4.12
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03036,ko03041
Exons6
Model size1845
Cds size1311
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig150.3478.1prot_F-serratus_M_contig150.3478.1Fucus serratus malepolypeptideF-serratus_M_contig150 150981..156110 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929486.5893998-UTR-F-serratus_M_contig150:150842..1509801622929486.5893998-UTR-F-serratus_M_contig150:150842..150980Fucus serratus maleUTRF-serratus_M_contig150 150843..150980 +
1690962875.3627245-UTR-F-serratus_M_contig150:150842..1509801690962875.3627245-UTR-F-serratus_M_contig150:150842..150980Fucus serratus maleUTRF-serratus_M_contig150 150843..150980 +
1622929486.7162457-UTR-F-serratus_M_contig150:156110..1565061622929486.7162457-UTR-F-serratus_M_contig150:156110..156506Fucus serratus maleUTRF-serratus_M_contig150 156111..156506 +
1690962875.4263566-UTR-F-serratus_M_contig150:156110..1565061690962875.4263566-UTR-F-serratus_M_contig150:156110..156506Fucus serratus maleUTRF-serratus_M_contig150 156111..156506 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929486.6013477-CDS-F-serratus_M_contig150:150980..1511411622929486.6013477-CDS-F-serratus_M_contig150:150980..151141Fucus serratus maleCDSF-serratus_M_contig150 150981..151141 +
1690962875.3731718-CDS-F-serratus_M_contig150:150980..1511411690962875.3731718-CDS-F-serratus_M_contig150:150980..151141Fucus serratus maleCDSF-serratus_M_contig150 150981..151141 +
1622929486.6160185-CDS-F-serratus_M_contig150:153775..1539891622929486.6160185-CDS-F-serratus_M_contig150:153775..153989Fucus serratus maleCDSF-serratus_M_contig150 153776..153989 +
1690962875.3814101-CDS-F-serratus_M_contig150:153775..1539891690962875.3814101-CDS-F-serratus_M_contig150:153775..153989Fucus serratus maleCDSF-serratus_M_contig150 153776..153989 +
1622929486.626439-CDS-F-serratus_M_contig150:154186..1543301622929486.626439-CDS-F-serratus_M_contig150:154186..154330Fucus serratus maleCDSF-serratus_M_contig150 154187..154330 +
1690962875.3894908-CDS-F-serratus_M_contig150:154186..1543301690962875.3894908-CDS-F-serratus_M_contig150:154186..154330Fucus serratus maleCDSF-serratus_M_contig150 154187..154330 +
1622929486.6374266-CDS-F-serratus_M_contig150:154535..1550271622929486.6374266-CDS-F-serratus_M_contig150:154535..155027Fucus serratus maleCDSF-serratus_M_contig150 154536..155027 +
1690962875.3993134-CDS-F-serratus_M_contig150:154535..1550271690962875.3993134-CDS-F-serratus_M_contig150:154535..155027Fucus serratus maleCDSF-serratus_M_contig150 154536..155027 +
1622929486.6816576-CDS-F-serratus_M_contig150:155296..1554531622929486.6816576-CDS-F-serratus_M_contig150:155296..155453Fucus serratus maleCDSF-serratus_M_contig150 155297..155453 +
1690962875.4106238-CDS-F-serratus_M_contig150:155296..1554531690962875.4106238-CDS-F-serratus_M_contig150:155296..155453Fucus serratus maleCDSF-serratus_M_contig150 155297..155453 +
1622929486.7023273-CDS-F-serratus_M_contig150:155967..1561101622929486.7023273-CDS-F-serratus_M_contig150:155967..156110Fucus serratus maleCDSF-serratus_M_contig150 155968..156110 +
1690962875.4183972-CDS-F-serratus_M_contig150:155967..1561101690962875.4183972-CDS-F-serratus_M_contig150:155967..156110Fucus serratus maleCDSF-serratus_M_contig150 155968..156110 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig150.3478.1

>prot_F-serratus_M_contig150.3478.1 ID=prot_F-serratus_M_contig150.3478.1|Name=mRNA_F-serratus_M_contig150.3478.1|organism=Fucus serratus male|type=polypeptide|length=437bp
MDLLKAELERKRQRTSELVAKAGGEKGGRRFVRRGEAVRLEKQEREQKQA
ELIRLREEKKRKRELEEERLEEEERKRRGKVSASTRNETVQESTAASEDG
KAAKEAPTKAETKISESGEKVSEREVKIRLRAMGLVVTMFGETQAQRLAR
LLHAEEEKGHHHDDFNLTDGHNVNNEFLGNVGADLTGRHLNVATGRDEEE
ATGDGKEADSDDDDDDEDDDNEQASSNAPRQAEGAKGAETAGGGGGAAGD
VGGTGGAGGASGGDEGAVNGGNNGVVKEMERHKLVRSFFRGLLKEWEMDL
NARPDHVKRTVQGKLETKTQKQAKDYMRPLFRLCKQKALPDGIMNNLVDM
INYMKEGEFVKANDVYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVA
HIMNNEAQRKYLVSVKRLMTYLQDKRTDIAPSKKVR*
back to top

mRNA from alignment at F-serratus_M_contig150:150843..156506+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig150.3478.1 ID=mRNA_F-serratus_M_contig150.3478.1|Name=mRNA_F-serratus_M_contig150.3478.1|organism=Fucus serratus male|type=mRNA|length=5664bp|location=Sequence derived from alignment at F-serratus_M_contig150:150843..156506+ (Fucus serratus male)
GAAAGAACCAGAAGTTCAAAGCAAAATGAACCTACTAGCTATACCAGGTA AAAGTGCCCCTGTCCCGAACTTCTCGACACGCATTTACTGTCTGCTGTCG TCGCTGATTCAGGCGAAGATAATAGATCGACGGAAATAATGGACCTCCTC AAGGCTGAGCTGGAAAGGAAAAGGCAACGGACATCCGAGCTAGTCGCGAA AGCTGGGGGAGAGAAAGGAGGGAGGAGGTTCGTTCGCCGCGGCGAAGCGG TGAGACTGGAGAAGCAGGAGCGGGAGCAAAAGCAAGCTGAGTTGATCAGG TGAGTGCCGAGGATTTCGTTGTTAGTCGTTTTATTCTTTCTCGGCTTCCT TCTGATGCAGCATATTCGACGCGCGAGACCAAGATTGTCTATTAATACTG CGTAGCACGTCGCCCTCAGGAGATGTACTGTATACTACTGTATCTACATC TTTACTCGTACTCCTCTAATATTTAAACGAATACCAGTAACGATCTCAAT ACAGCTGTGTTGGTCACTCGATTGGCTGTATTTTCCAGTCACGTGTGCGG GGTTGCCAACGTACCGACATTTGCAACCGGGACATCCCGATAAGGCAGTT AAACATACTGCAGCACTCTCAGCATTTGATGTGACCACTGCCCTGGACTT GTTCAGTACGATTTTTCTCTTCGTTATTCGACTTTGTGGCGATGCTCAGT TGGCTCCAGGTTACGGTTGAAGTATCGATACTTGTGCAAGACAGCACGTA TTAGAGCCACGGTAACGTCTCATTTAGACAATCAACTACTTGCCTGTTCT TATTCGTTGACTTGTCGCTCTTGCGTCCACTGGGGTAGTACGGGTGTTCG AGTCGTAGCCGGGAGGCGTTTACCCTAGATCACGACACCAGGCAATACTT GTACACGCTTCCGATGCTTTCCGTATACATGCCCACGGAGACAGCCAAAA TAGATATTTTCCCCTGTTTATCTGACCATGAGCAGAATTGGCAACCGCAC CCGGTTTTTAAAGAAAAATCGGAACGCATCTACGTGAACCTTGTGAGCAT TCACTCAATCAGAGGGCGGGAATTGTCAAAATGTTTACGTGGGAACATAG GCTGGACGGACAAAAGTCTTATCGTGTGGTATTTATTCAATCAGGTTCCC CGTACTCTGCAAAAGTGCTGACCATATAGTCTATACATAATGTACCAATA GTGAGAATGGGAAAAGAGAGGCGCACTTTTTTCCCGCTCTTTCTGAGCAA ATACCCTCGGCCTTTCTGTCAGTTCCATGTCCAGATGTTGTCTACCCATG TTCTTGCCTTCGTTCTTCCGACGTGTTGGGTGCAGCACTCCCAACACGCC TCGACTTCTCCATCGTCGACATATTTGCTTACTCTTGTGTACCCTCCGAG CATCCCTACTCTCTTCTCGGTTCGGGTCCAACATGTTTTCCGCGGCGGTG GTGTACCAACTTTGCTGCCACAGGCACGGTTGCCTACGATTTTGCTTTGT TGGAGTACAGCCATTACTTTCAACATGCTGCCCACTTCATACCAATAGTG GGTGTGGGAAAGACAGGCGTATGTCAATTGGTCCATGGTGACCTGCTAAG GCAGCACTCGTTCGGAACTATCTTGAGATTTACTGGCCCTGTGCCGGCGG ACTCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAAACT TGGGGCTTACCCGATGGCGTATGGCGGTTTAATATAAATATATGGACGCC CCCGCAGAACTCGGGAGGAATCCCGTAAGTAAGCACCATATTCAGCCTGC GTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCG CGAGACCAAATTCTCAGGCACGAACGCGGACAGGGGAATATTATTTTCCC TGTTCAGCTGACCACGAGCAGGATTGGCAACCATACCAGGTTGATCCATA CTCTTGCTTTATGTGTGACCATACATCACCACCAGTCGATGCTGTTGGCA GGCTTGTACTGTCAGCATCGACGAGCTCTCGCATGAAGGGAGATCGATTC CATTAAGTGATAAGTGATCCATGGTGATACCTGAAAAGGCAGCACCCTTT ACTGGAACAACCTTGGAGCCTACTGGCCCTGTGCCGGCGAACTCCCAAGA GTGAACGCCATCGGTACGCAATTGCGTGACTTGATAAACGCAGGACTGGC CCGATGGCAGTTGGCGGTATAAATAAATGGACCAATGAACGCCGCCGCGG AAAGCGGGAGGAATCCCGTGAGTAAGCACCATATTCAGCCTGAGTGTGGA GAATAAACAGGCTGACGCAGGACGGGACGGCTGAACCCGTCTCGCGAGAC CAGGTTCTCTGGCGCGAACTGAGACAGGGAAACATTCAGTTTCCCTGTTC AGCTGACCCCGAGCAGGGTTGGCAACCTTACCCGGTTGATCCATACCAGT ACTCTCGCTGTAAGGGATGACCATGCTTTTATACCTGTCAGCAACATGAT GTTTCCTTTTCTCGTGGTTCTCACCCACCCCACTTCCGGTTTTGAACTCG TCCTAGGCGGCGCATAAACGTGAGTATTTTGTTATCTCTTCTCACCCTTC CAATACACTTATCTTAAATCAAAAACAGCGTCACACCGAAGGGGATCGGC GTGGCCCCGAATTCTAAACTCCCTTTCCCCGTCTCCTCTTGTTCGGGACT TATTTTTTCGGTCCTCATGAATTATACTATAATTAGGCCAGGGGTTAGAC AATATTAGGTCACCTTCCACTCTCGAGGTCGGTCGTGGGTCCCCTTTTAA GGCGCTTTCTTGAAAATGAGCCAACACGCGCCATTATTTTAATAGCTCGA CTCAGTACGCAAGTGACCCTACCCATTCGGTTTTTGGCCCTGCGTGTTTG CGGCGCGCGTGGGGGGCGGGGTCTGCGCGACAGGCTTAGAGAAGAGAAGA AGCGCAAGCGAGAACTGGAGGAGGAGCGGCTTGAAGAGGAGGAAAGAAAG AGACGAGGAAAGGTTTCAGCCTCCACCCGGAACGAAACGGTCCAAGAGTC CACGGCAGCTTCGGAGGATGGCAAGGCTGCAAAGGAGGCGCCTACGAAGG CCGAGACGAAGATTTCGGAGTCGGGCGAGAAAGTATCGGAGCGCGAGGTA GGTTATGGCGAGGTCTTGGAACTTCTCTGCTGTCGCGAGTTCCGTGTCAC CATACCTGCGTGAATGGCTAGCGCGCGGTTGAATCTTAGGATATCAATAG CGAGATGTGAGGAAAGTACCGGTACCGGATTGCTCTCCTCACCGACACCA ACCCGGTCGAAATGCTCCTTGCCCCGTCGTGATGACTTGTCCAGGTTAAG ATACGACTCAGAGCAATGGGTTTAGTCGTAACGATGTTTGGGGAGACGCA GGCGCAGCGTTTGGCTCGTCTCCTGCATGCGGAGGAGGAGAAGGGACATC ACCACGACGACTTCAATCTGACGGACGGCCACAACGTGGTGAGTCAAAAA TATGCCTGTCAGTTCTGTCGTACGCGTCGCCTTGAACCGCGCTGGGTTGG TCTTCATTCGAATCCGCCGGGCGCTTTCCAGCCACAGCGCTTTAGAGAGT AAGTCCCCACGAGCCACGACCGCCTGTCTTGACTCTCCTCGGTTGATGCT CTCTTTCGACCTCTTCACACAAAATTCCTCCGTTCTTCGAAAGAACAACG AGTTCTTGGGCAACGTGGGCGCAGACCTCACTGGTCGCCACTTGAACGTC GCCACCGGCCGCGACGAGGAAGAGGCTACCGGAGACGGCAAGGAGGCGGA CTCGGACGACGACGACGACGACGAAGATGACGACAACGAGCAAGCGAGCT CGAACGCCCCGCGGCAAGCGGAAGGAGCAAAAGGGGCGGAAACCGCAGGA GGAGGGGGGGGAGCAGCTGGGGATGTTGGTGGGACGGGCGGGGCTGGGGG GGCATCAGGGGGCGATGAAGGCGCGGTCAACGGTGGAAATAACGGCGTTG TGAAGGAAATGGAACGGCACAAGCTGGTACGGAGCTTCTTCAGGGGGCTG CTGAAAGAGTGGGAGATGGACCTCAACGCTCGGCCGGATCACGTCAAGCG CACCGTGCAGGGAAAGCTCGAGACCAAAACGCAGAAGCAGGCCAAGGACT ACATGCGACCGCTCTTCAGACTGTGCAAGCAGAAGGTGCGAGTCTTGATG GGCACACGCTTCTTGTGTGCGGACTCTTTTGCTTGTAGATGACACTGGGG CATCACACATCCAGGTTTTCTTGGGCTGTCTGGTCTTGATCCGTGCTAGT GGCATGTGCGCGTGTTGCCCTGCTCGGAGGCTCGCGCGTGGCAGAAATTG CAGTGAACAGCACAGTCAGGCCTGACATACAAACAAAGCCTGCATCGCGC AGGCATCTTGTTGACCAACAAATCACGTCGCTGTTTCCGCGCGTTCCGCG ACAGGCGCTGCCCGACGGTATCATGAACAACTTGGTTGACATGATCAATT ACATGAAGGAAGGCGAGTTCGTGAAGGCGAACGACGTTTACATTCTCACC GCGATCGGAAACGCTCCGTGGCCGATTGGCCTCACCATGGTGGGAATCCA CGAAAGATCAGGTGAACAGCCAAGTCCACCGCAAAATGATATGCGATGGC GTACTGTTTGAAGAAAAATCTGAATGCACCTAGATTTTCTGATCCGCCTC TGTTGTATCCCGCATGTTCCCTGAAACGGTTATTAATACTTACTATTGTA CAAGATAAAAATTGTCGGATGTTTTTACTGCTCAGATTATTTCCGTTTAT TAATAGGTTACAATTATCAGGATATATCTAGTGCAAGTAGTGACCTGGCT TGAGCTTGTCGCCTGCATACCTTTGCCGGATTAAGCGATAGGAACATGCT CGAAAAAATCTAGAGTCGCCGGAAATAAGACGGAAAACGATTATACAGTA TCATAGACGGAATCGTTGTCCTCGGTGAGACAAAAGGATAGGATCCGTTA CGAGGATTTACTAAATAAACTTGAGTTATTGTTATAGTATTTCGTATCGC CATGACGAACGCCCTTCGGTCTCGCCAGTTGACATTCTCTTCACCTCTTC GCTGCCCTACTCTGCTTGCTGGCAGGTCGCGAGCGCATTTCATCCAAAAA CGTTGCCCACATCATGAACAACGAGGCTCAGCGAAAATACTTGGTTTCGG TGAAGCGACTGATGACCTACCTCCAAGACAAGCGTACCGACATCGCTCCG AGCAAGAAGGTTCGCTGACGGGGCTTCTCCGCAAAAGCGACCGTGGGCGC CGAACGAAGATACAAAGAAAGCGTTTTGAAGACGCGACCTTGGGTATCGT GTACAGTCTAAAGATATCTCGTTTGCTTTTTTTACTTAATAGTCATATGA TAGCGAGTCATTTGAAAGACCCGCTTAGTGTTTTATCTATATTTGGGAAG GGCCGATGAAACATGTGTCCCGCAGAATAGGAAATAGATGATGGGGACAT TCCGGCATCCTCAATCCTCTCGGTGAGGCTTCTGACTGGGGCATTACAAA GCTGTCAATGGTACTGCTGTTAAAGGTTTACACGGCCGGATCAAGATAAC GAGGCGCCCCCCGTAACCGTCACCGGGGTGAGGTGCCCCACATATAAGTC GGAGACCAAGTGTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig150:150843..156506+

>mRNA_F-serratus_M_contig150.3478.1 ID=mRNA_F-serratus_M_contig150.3478.1|Name=mRNA_F-serratus_M_contig150.3478.1|organism=Fucus serratus male|type=CDS|length=2622bp|location=Sequence derived from alignment at F-serratus_M_contig150:150843..156506+ (Fucus serratus male)
ATGGACCTCCTCAAGGCTGAGCTGGAAAGGAAAAGGCAACGGACATCCGA
GCTAGTCGCGAAAGCTGGGGGAGAGAAAGGAGGGAGGAGGTTCGTTCGCC
GCGGCGAAGCGGTGAGACTGGAGAAGCAGGAGCGGGAGCAAAAGCAAGCT
GAGTTGATCAGATGGACCTCCTCAAGGCTGAGCTGGAAAGGAAAAGGCAA
CGGACATCCGAGCTAGTCGCGAAAGCTGGGGGAGAGAAAGGAGGGAGGAG
GTTCGTTCGCCGCGGCGAAGCGGTGAGACTGGAGAAGCAGGAGCGGGAGC
AAAAGCAAGCTGAGTTGATCAGGCTTAGAGAAGAGAAGAAGCGCAAGCGA
GAACTGGAGGAGGAGCGGCTTGAAGAGGAGGAAAGAAAGAGACGAGGAAA
GGTTTCAGCCTCCACCCGGAACGAAACGGTCCAAGAGTCCACGGCAGCTT
CGGAGGATGGCAAGGCTGCAAAGGAGGCGCCTACGAAGGCCGAGACGAAG
ATTTCGGAGTCGGGCGAGAAAGTATCGGAGCGCGAGGCTTAGAGAAGAGA
AGAAGCGCAAGCGAGAACTGGAGGAGGAGCGGCTTGAAGAGGAGGAAAGA
AAGAGACGAGGAAAGGTTTCAGCCTCCACCCGGAACGAAACGGTCCAAGA
GTCCACGGCAGCTTCGGAGGATGGCAAGGCTGCAAAGGAGGCGCCTACGA
AGGCCGAGACGAAGATTTCGGAGTCGGGCGAGAAAGTATCGGAGCGCGAG
GTTAAGATACGACTCAGAGCAATGGGTTTAGTCGTAACGATGTTTGGGGA
GACGCAGGCGCAGCGTTTGGCTCGTCTCCTGCATGCGGAGGAGGAGAAGG
GACATCACCACGACGACTTCAATCTGACGGACGGCCACAACGTGGTTAAG
ATACGACTCAGAGCAATGGGTTTAGTCGTAACGATGTTTGGGGAGACGCA
GGCGCAGCGTTTGGCTCGTCTCCTGCATGCGGAGGAGGAGAAGGGACATC
ACCACGACGACTTCAATCTGACGGACGGCCACAACGTGAACAACGAGTTC
TTGGGCAACGTGGGCGCAGACCTCACTGGTCGCCACTTGAACGTCGCCAC
CGGCCGCGACGAGGAAGAGGCTACCGGAGACGGCAAGGAGGCGGACTCGG
ACGACGACGACGACGACGAAGATGACGACAACGAGCAAGCGAGCTCGAAC
GCCCCGCGGCAAGCGGAAGGAGCAAAAGGGGCGGAAACCGCAGGAGGAGG
GGGGGGAGCAGCTGGGGATGTTGGTGGGACGGGCGGGGCTGGGGGGGCAT
CAGGGGGCGATGAAGGCGCGGTCAACGGTGGAAATAACGGCGTTGTGAAG
GAAATGGAACGGCACAAGCTGGTACGGAGCTTCTTCAGGGGGCTGCTGAA
AGAGTGGGAGATGGACCTCAACGCTCGGCCGGATCACGTCAAGCGCACCG
TGCAGGGAAAGCTCGAGACCAAAACGCAGAAGCAGGCCAAGGACTACATG
CGACCGCTCTTCAGACTGTGCAAGCAGAAGAACAACGAGTTCTTGGGCAA
CGTGGGCGCAGACCTCACTGGTCGCCACTTGAACGTCGCCACCGGCCGCG
ACGAGGAAGAGGCTACCGGAGACGGCAAGGAGGCGGACTCGGACGACGAC
GACGACGACGAAGATGACGACAACGAGCAAGCGAGCTCGAACGCCCCGCG
GCAAGCGGAAGGAGCAAAAGGGGCGGAAACCGCAGGAGGAGGGGGGGGAG
CAGCTGGGGATGTTGGTGGGACGGGCGGGGCTGGGGGGGCATCAGGGGGC
GATGAAGGCGCGGTCAACGGTGGAAATAACGGCGTTGTGAAGGAAATGGA
ACGGCACAAGCTGGTACGGAGCTTCTTCAGGGGGCTGCTGAAAGAGTGGG
AGATGGACCTCAACGCTCGGCCGGATCACGTCAAGCGCACCGTGCAGGGA
AAGCTCGAGACCAAAACGCAGAAGCAGGCCAAGGACTACATGCGACCGCT
CTTCAGACTGTGCAAGCAGAAGGCGCTGCCCGACGGTATCATGAACAACT
TGGTTGACATGATCAATTACATGAAGGAAGGCGAGTTCGTGAAGGCGAAC
GACGTTTACATTCTCACCGCGATCGGAAACGCTCCGTGGCCGATTGGCCT
CACCATGGTGGGAATCCACGAAAGATCAGGCGCTGCCCGACGGTATCATG
AACAACTTGGTTGACATGATCAATTACATGAAGGAAGGCGAGTTCGTGAA
GGCGAACGACGTTTACATTCTCACCGCGATCGGAAACGCTCCGTGGCCGA
TTGGCCTCACCATGGTGGGAATCCACGAAAGATCAGGTCGCGAGCGCATT
TCATCCAAAAACGTTGCCCACATCATGAACAACGAGGCTCAGCGAAAATA
CTTGGTTTCGGTGAAGCGACTGATGACCTACCTCCAAGACAAGCGTACCG
ACATCGCTCCGAGCAAGAAGGTTCGCTGAGTCGCGAGCGCATTTCATCCA
AAAACGTTGCCCACATCATGAACAACGAGGCTCAGCGAAAATACTTGGTT
TCGGTGAAGCGACTGATGACCTACCTCCAAGACAAGCGTACCGACATCGC
TCCGAGCAAGAAGGTTCGCTGA
back to top