mRNA_F-serratus_M_contig1493.3396.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 117 bits (293), Expect = 1.910e-28 Identity = 52/103 (50.49%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMASMVALINSVSM 309
G W+TV+T+DE RR+ +WFRIGFEP + DFTQ+G+WFTV L+EWA LAC+A+L ++ VQ +FC +H F+LL +PFAN +++ M ++V L ++V M
Sbjct: 424 GHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCM 526
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 113 bits (283), Expect = 4.250e-27 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMASMVALINSVSM 309
G W T ET +EG RRE WFRIGFEP FVDFT+SG WF L+EWA L C+ L + V+QL +FC +H +F+LL FRPFAN +++ M + + I++V M
Sbjct: 1150 GTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCM 1252
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 109 bits (273), Expect = 2.130e-26 Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANK 258
G+W TV+T+DE RR +WFRIGFEP F DFTQ+G+WF V L+EWA+LAC+A+L ++ VQ +FC IH F+LL +PFAN+
Sbjct: 302 GQWETVQTTDEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTFILLVACKPFANR 387
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 110 bits (274), Expect = 7.020e-26 Identity = 50/103 (48.54%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMASMVALINSVSM 309
G+W TV+T D + RE +WFRIGFEP FVD+T+ GTWF V+ L+EWA A V ++ E+ VVQL++FCG+H F +L +PFAN +++ + + V I+++SM
Sbjct: 1502 GQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISM 1604
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 108 bits (270), Expect = 2.310e-25 Identity = 49/103 (47.57%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMASMVALINSVSM 309
G+W TV+T+++ RR+ +WFRIGFEP F DFTQ+G+WF + L+E A+LA +A+L ++ +Q L+FC +H FVLL ++PFAN +++ +A+MV L ++V M
Sbjct: 469 GQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCM 571
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 105 bits (263), Expect = 2.170e-24 Identity = 46/102 (45.10%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMASMVALINSVS 306
G+W TV+T + + RE +WFRIGFEP FVD+T+ GTWF V+ L+EWA +A V ++ ++ VQLL+FCG+ F++L +PFAN +++ + + + I++VS
Sbjct: 1683 GQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVS 1784
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 105 bits (261), Expect = 4.040e-24 Identity = 45/101 (44.55%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMASMVALINSV 303
G+W TV+T + + RE +WFRIGFEP FVD+T+ GTWF V+ L+EWA +A V ++ ++ VQLL+FCG+ F++L +PFAN +++ + + + I++V
Sbjct: 1724 GQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAV 1824
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: A0A6H5KCW7_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW7_9PHAE) HSP 1 Score: 103 bits (258), Expect = 9.940e-24 Identity = 50/103 (48.54%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMASMVALINSVSM 309
G W TVE D +R RNWFRIGFEP FVD+T++G+WF + L+E A++ACV +L +S VQLL+F G++ FVL+A PFAN++++ MA+ +N+ M
Sbjct: 798 GAWRTVENEDAKEQRLRNWFRIGFEPLFVDYTKAGSWFALYALMEAAVIACVGVLIDSSQVQLLIFLGLNVVQFVLVAHLTPFANRVVESMAACRVGVNAFCM 900
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.040e-22 Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLE------------------WAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKI 261
G W T ET +EG+RRE WFRIGFEP FVDFT+SG WF L+E WA L C+ L + V+QL +FC +H +F+LL FRPFAN++
Sbjct: 265 GTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRL 369
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Match: D7G1B8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B8_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 3.550e-22 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 1
Query: 1 GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLACVAILFESGVVQLLVFCGIHFGAFVLLAKFRPFANKIMDFMAS 279
G W TVE D +R RNWFRIGFEP FVD+T++G+WF V L+E A++A V +L ++ VQLL+F G++ VL+ + PFAN++++ MA+
Sbjct: 132 GAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALMEAAVIAGVEVLIDNSQVQLLIFLGLNVVQLVLVVRLTPFANRVVESMAA 224 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1493.3396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1493.3396.1 >prot_F-serratus_M_contig1493.3396.1 ID=prot_F-serratus_M_contig1493.3396.1|Name=mRNA_F-serratus_M_contig1493.3396.1|organism=Fucus serratus male|type=polypeptide|length=103bp GRWHTVETSDEGLRRERNWFRIGFEPTFVDFTQSGTWFTVMFLLEWAMLAback to top mRNA from alignment at F-serratus_M_contig1493:128389..129202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1493.3396.1 ID=mRNA_F-serratus_M_contig1493.3396.1|Name=mRNA_F-serratus_M_contig1493.3396.1|organism=Fucus serratus male|type=mRNA|length=814bp|location=Sequence derived from alignment at F-serratus_M_contig1493:128389..129202- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1493:128389..129202- >mRNA_F-serratus_M_contig1493.3396.1 ID=mRNA_F-serratus_M_contig1493.3396.1|Name=mRNA_F-serratus_M_contig1493.3396.1|organism=Fucus serratus male|type=CDS|length=618bp|location=Sequence derived from alignment at F-serratus_M_contig1493:128389..129202- (Fucus serratus male)back to top |