mRNA_F-serratus_M_contig1492.3385.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1492.3385.1 vs. uniprot
Match: D7G4V9_ECTSI (MORN repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V9_ECTSI) HSP 1 Score: 306 bits (783), Expect = 4.740e-93 Identity = 245/400 (61.25%), Postives = 289/400 (72.25%), Query Frame = 3
Query: 351 MLQRAGFAPAIHLTHLENLQNKKGADAMHLGVVSEKQYHDICSRRAFDKFFFQIPPPKSALEQMPTIAREILFKDSSVDFEELEE-GETEVGTAQSTETCKPRNVQEEEKLRRIGFKQDLFTPPGFAPPPKNIPNSEGRHKFFSGYDGAWENGNMSGFGVYRFADGFTFEGIMRNNWPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVFHGRGRFQSANLNATYDGCWNSGFINGYGTLTMPDGIKVVRPWPSQNRFSRFDGGLSLRGALELVGHENEEIRLRRLDEDDEIYGVSNYLELQLRVTTTRKSIAESRANAKINLRKESAAKRRAAKIAMMEAKIKMLMDMERDTEPDDVEKGLL 1547
ML RAG+ PA HL H+ +Q K+GAD+M LG VS +QY I RAFD++FFQIPP KS L+ M +AR+IL KD + + + ++ E +V Q K +N E+ K+RRIGFK LF PPG APP I NSEGRHK+FS YDG WENGNM+GFG YRFADG T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RF+SANL TY+G W GFI G+GTLTMPDG K+VR WP+Q SRF GGLSLRGALELV +E E+ RL +LDE +YGVS+ ELQ RV R+ IAE RA K N + E+ AKR+AAK+AMME K+ L+ E++ EPDD+EK ++
Sbjct: 1 MLGRAGYLPAKHLGHISKIQKKEGADSMKLGAVSGQQYKAIFKARAFDQYFFQIPPKKSTLDMMSEVARKILSKDPAAEAQRKKDVEEAQVAGGQYHGKTKQKNPNEDAKIRRIGFKDTLFGPPGLAPPQHQILNSEGRHKYFS-YDGDWENGNMNGFGTYRFADGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFESANLKVTYEGWWVDGFIRGHGTLTMPDGTKLVRSWPAQ---SRFGGGLSLRGALELVLYEREQARLDKLDERQALYGVSDLAELQFRVNNVRREIAERRALNKANEKAETMAKRKAAKLAMMERKLNELLQEEKEAEPDDIEKFMM 396
BLAST of mRNA_F-serratus_M_contig1492.3385.1 vs. uniprot
Match: A0A835ZCZ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ9_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.760e-19 Identity = 114/435 (26.21%), Postives = 171/435 (39.31%), Query Frame = 3
Query: 309 LLTPGELRLQRYKKMLQRAGFAPAIHLTHLENLQNKKGADAMHLGVVSEKQYHDICSRRAFDKFFFQIP-----PPKSA-------LEQMPTIAREILFKDSSVDFEELEEGETEVGTAQSTETCKPRNVQE----EEKLRRI--GFKQDLFTPPGFAPPPKNIPNSEGRHKFFSGYDGAWENGNMSGFGVYRFADGFTFEGIMRNNWPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVFHGRGRFQSANLNATYDGC----------------WNSGFINGYGTLTMPDGI---KVV-----RPWPSQNRFSRFDGGLSLRGALELVGHENEEIRLRRLDEDDEIYGVSNYLELQLRVTTTRKSIAESRANAKINLRKESAAKRRAAKIAMMEAKI 1487
++ E ++Q ++++L+RAG+ H+ ++ KG++AM LGVVS Y IC R FD+F++ + P K T A DS+ L++ V A + T + + + RI K F PPG APP NIP+SEG+ KFF Y G W++G M G+GVYRFADG T++ N+P V+ GR + + C +G I G G+L P +VV R WP + R+ GLS+R ALELV + + +R+L + D I G + +L L V+ R+ I + R K R+ RR AK M++AK+
Sbjct: 73 MVRKSEEQIQVHERLLERAGY-DGHFAAHVRDVHTHKGSEAMRLGVVSGMWYKHICDSRVFDEFYYPVKQDLRLPLKERRSSFNINFNSATTAAGTAANSDSAPAAASLQDAADAVNIAAARSTLDSDGGERVSGPDYDMYRIVEEKKAPTFGPPGLAPPITNIPHSEGQEKFFH-YKGEWKDGKMCGYGVYRFADGKTYQ----LNYPSQASYLGDFFAGHMHGRGTYTSCPRAFVKSKPYVAAGALQGGTGGAGGISASGDEELHRCSQSMCT-VYEGRWEAHACTSAQSVCKCSLCSSALLLLCRRIHICQNGCICGRGSLYWPSVEPKGEVVWHRDKRNWP---KTGRYGSGLSVRAALELVRDDAQAQHMRKLQDRDFISGAATMAQLDLYVSKVRREIGQQRMLEKHTQREMRIRARREAKDNMLKAKM 497 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1492.3385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1492.3385.1 >prot_F-serratus_M_contig1492.3385.1 ID=prot_F-serratus_M_contig1492.3385.1|Name=mRNA_F-serratus_M_contig1492.3385.1|organism=Fucus serratus male|type=polypeptide|length=474bp MVVVEASAPESDGIKHKTEDGAQNNITQLAGVEPPGVGTRAATVQLIPEGback to top mRNA from alignment at F-serratus_M_contig1492:56701..82667- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1492.3385.1 ID=mRNA_F-serratus_M_contig1492.3385.1|Name=mRNA_F-serratus_M_contig1492.3385.1|organism=Fucus serratus male|type=mRNA|length=25967bp|location=Sequence derived from alignment at F-serratus_M_contig1492:56701..82667- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1492:56701..82667- >mRNA_F-serratus_M_contig1492.3385.1 ID=mRNA_F-serratus_M_contig1492.3385.1|Name=mRNA_F-serratus_M_contig1492.3385.1|organism=Fucus serratus male|type=CDS|length=2844bp|location=Sequence derived from alignment at F-serratus_M_contig1492:56701..82667- (Fucus serratus male)back to top |