mRNA_F-serratus_M_contig1490.3373.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: D7FJE9_ECTSI (PTIF2, plastid translation intiation factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE9_ECTSI) HSP 1 Score: 1007 bits (2603), Expect = 0.000e+0 Identity = 660/1112 (59.35%), Postives = 764/1112 (68.71%), Query Frame = 2
Query: 155 MAGRYGVLILALLRAWSSRAFMQPRCPGTLACRGMSNFGAKACKRMQRSASIHMSEQTENRPRAETSEAFMRGNGQRVMDGRDGQGGN--SDGPLLLTKPMDLVRVRGFGSGTEAGYQRNGGGRDGG-RGRGRAAYLNDDFGGNGGXXXXXGYQEGYQGRGRGGRFDAGRFLVG-----------------------------------GGGGCFGADGATRFLAGDRGGSRFETAGRGRGXXRFDIGGRDGRR-------------------GGRGEGFXXXXARGQAGVEASPRGGIDGEEPDLEEGLGVADGLVDIGLPEKRAPGFKEDKKKVKGYEGKDRETPERRAR---KGSKLQ-QAVPLDDDVDEDDDSSIGDVGDLLGGAAAAAEKMLEDAAALRLAPAT-PGSKASEADLGQGAPGGRLQQLGRSEVQQQPSQXXXXXXXXXXXXXXXXXXXXXXXXXXXGQQASYAPAPAPALVMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVADDSNMGGDDAVESVGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTGKETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVSNAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECYALD 3304
MA + + LL A + F+QP CPG LA R + GAK+C R S+ + MS+ TE+RPR + E+ G DG +G + +D P +LTKPMDLVRVRGFGSG+ AGY GRDGG RGRG ND + XXXXX GY F GGGG F DG R RF+T XRFD GGR R GGRGE RG+ GG+D + G G G +D P ++ FKEDKKKVKGYE K+ P++ ++ +G K + QA LD+++ +DD + + DL G A AAA ML +AA P+T P + AS P R+Q G + Q Q + XXXXXXXXXXXXXXXXXXXXX A +V L PT+ VS+LA MM+V+ AEVLKHLMLDLGIMATITQSIDADTAR+VA NF VEV D S+ ++ V SVG+ GTAIE+DAEDT++PRAPVVTIMGHVDHGKTSLLDAIRET+VVAGEAGGITQHVSAYQVKT GA++TFVDTPGHAAFSEMR RGANATDIVVLVVAADDGVMEQTKE IATA+MA VP+V+AINK VDKE ADVQKVQNELMTFD+LPEEFGGDTQ VA+VSAKQ++GL+ELLEKILLQSEVLELKSNP+R+AEGV+IEA +++GLGTVGTVLIQRGTLRVGD+FVAGGAWGRV+AL++ GRRIKEAGPS PVQVGGFDGVPDAG+VF VV++ED+ARDLAEARRKIARESSAA+LQGGLK+ + L+G+AD GKE +ELPVMIKADVQGSEQAL TAL+EMISED+YF+AKCK+LPSGVG ITKSDVAIAGVSNAFVVGFNVGADQEA REARANGIDI YYSVVYNVMDDIQ KLDELVSPTP+G Y+GRA+VK+IFNIGKVGNIAGS+VEDGVINKG +VLVKR GRI+HEG LKTLKN+K D +MV GTECGIQVEGFE+FQEGD+IECY +D
Sbjct: 1 MAAAWRGTVFTLLTAACASGFVQPGCPGALAGREWARGGAKSCARPVCSSVLRMSDHTEDRPRTQVFESSGGG------DGEEGSAASKSADAPYVLTKPMDLVRVRGFGSGSSAGYFP---GRDGGGRGRGGRGAYNDGY-----XXXXXXXXXGYD------NFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGRF--DGXXRXXG------RFDTG------XRFDXGGRGXRXXXXXXXXXXXXXXXXXXMMGGRGE-SSYGSGRGRG-------GGLD------DVGGGXXGGGLDYAPPTEKRTTFKEDKKKVKGYESKN--VPDKASQSVLRGRKDRLQAESLDEELYDDDGADLSTDDDLFGAATAAATAMLGEAAEKVAEPSTKPKAVAS-------TPVERIQPTGGRQAQAQALKAAGRPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----VVRLPGPTIVVSELAEMMEVRPAEVLKHLMLDLGIMATITQSIDADTARQVANNFEVEVDDGSSSFDEEEVVSVGDTGTAIEIDAEDTMLPRAPVVTIMGHVDHGKTSLLDAIRETKVVAGEAGGITQHVSAYQVKTDAGADLTFVDTPGHAAFSEMRVRGANATDIVVLVVAADDGVMEQTKESIATARMADVPIVVAINK--------VDKEGADVQKVQNELMTFDLLPEEFGGDTQ--------------------------VAMVSAKQKSGLDELLEKILLQSEVLELKSNPDRSAEGVIIEARMERGLGTVGTVLIQRGTLRVGDIFVAGGAWGRVKALIDHQGRRIKEAGPSTPVQVGGFDGVPDAGDVFTVVDREDIARDLAEARRKIARESSAAILQGGLKNDMLSILSGEADEGKELFELPVMIKADVQGSEQALQTALSEMISEDEYFKAKCKLLPSGVGEITKSDVAIAGVSNAFVVGFNVGADQEATREARANGIDIGYYSVVYNVMDDIQAKLDELVSPTPDGEYTGRAVVKVIFNIGKVGNIAGSSVEDGVINKGGNVLVKRLGRIVHEGKLKTLKNLKVDADKMVMGTECGIQVEGFEDFQEGDLIECYKMD 1017
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: A0A835ZAQ9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ9_9STRA) HSP 1 Score: 692 bits (1785), Expect = 9.650e-231 Identity = 363/612 (59.31%), Postives = 462/612 (75.49%), Query Frame = 2
Query: 1469 MKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVADDSNMGGDDAVESVG--EKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTG-KETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVSNAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECY 3295
M+ K AEV+K+LM+++G+MAT+TQS+DA+TA VA F +V + + DD V + G G AI+ D E++L+PR PVVTIMGHVDHGKT+LLDAIR +V +GEAGGITQ + AYQV T +G VTF+DTPGHAAFSEMRARGANATD+VVLVVAADDGV EQTKECIATAK+A VP+V+AINK +DK AD +V NELM + +L EFGGD + V VSAK + GL++LL+KILLQ+EVLELK+NP RAA+GVVIEA +K+GLGTV T LIQRGTL++GD+FVAG +WG+VR LMN TG RI EAGPS PVQV GFDGVP AG+VF VV+KE+ AR + ++RRK+ RE+ AA +QG LK +++ L+G + G KE ELP++++AD GS +AL ++L E++SED+YF+ CK+L +GVG +TKSD+AIAGVSNA+VV FNV A+ +A +AR I+I YY+VVY+V+D +Q++LD + SPTP+GVY GRA VK+IF+IGKVGNIAGS V DG + +GS+V + R GR++HEG LK LKNVKADV+ MV GTECGIQV FE+FQEGD IECY
Sbjct: 1 MEAKPAEVVKYLMINMGVMATVTQSVDAETAVVVAEAFGKKVVRGA-LPDDDGVAAAGVANMGNAIDEDPEESLLPRPPVVTIMGHVDHGKTTLLDAIRSAKVASGEAGGITQSIGAYQVTTASGQEVTFIDTPGHAAFSEMRARGANATDVVVLVVAADDGVKEQTKECIATAKLASVPIVVAINK--------MDKPGADPARVLNELMNYQLLSTEFGGDVE--------------------------VGKVSAKNKDGLDDLLDKILLQAEVLELKANPNRAAQGVVIEAGMKQGLGTVATTLIQRGTLKIGDIFVAGASWGKVRLLMNHTGARITEAGPSTPVQVVGFDGVPGAGDVFTVVDKEETARTITDSRRKLLRENQAAQMQGDLKGNVEAILSGMLEDGAKEKMELPIVLRADGPGSAEALASSLRELVSEDEYFKVTCKVLTAGVGEVTKSDIAIAGVSNAYVVCFNVAANHQAVEDARRGDIEIGYYNVVYDVLDQVQERLDRIRSPTPDGVYIGRAQVKVIFSIGKVGNIAGSEVLDGEVRRGSNVRIMRMGRVVHEGALKVLKNVKADVEAMVAGTECGIQVSDFEDFQEGDFIECY 577
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: A0A7S3Y8J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J2_HETAK) HSP 1 Score: 643 bits (1659), Expect = 6.050e-210 Identity = 346/632 (54.75%), Postives = 451/632 (71.36%), Query Frame = 2
Query: 1421 VMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVADDSNMGGDDAV----ESVGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQD-FLNGQADTGKETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVSNAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECYAL 3301
V+L EP+ TV++LA + +K AEV+KHLM +G+MAT TQS+D T VA F V D +D E+V E G A++ D ++L+PR+PVVTIMGHVDHGKTSLLDAIRE RV GEAGGITQH+ AYQV+T +GA VTF+DTPGHAAFS MRARGAN TDIV+LVVAADDGVMEQT + IA AK AGVP+V+A NK +DK+ ADVQKV+NELM +D+L EE+GGD A VSAKQR GL++LLEK+LLQ+E+L+L++NP+RAA+G VIEA +++GLG VGT LIQRGTLRVGDVF+AG +WG+VRAL++ G RIKEAGPS+PVQV GF+ P AG+ VV+ E AR +AEAR +++ A L+G L+S+++ F G+A G E + V+IKADVQGS +AL +L ++ + D+ K+L + G +TKSDVA+A VS+A VV FNV A+ +A EAR GIDI Y S+VY+V+DD++ ++ E++SPTP+G Y+G+A VK +F+IGKVG IAGS V DG + G++V V R R+IHEG + TLKN+KAD +MV GTECGI +E FE+F+EGD+IECY +
Sbjct: 125 VVLNEPSYTVAELADKLFLKPAEVVKHLMFSMGVMATQTQSLDMQTCVAVAEGFGRTVTDSETSDDEDEEGEYEETVAESGIALDEDDAESLLPRSPVVTIMGHVDHGKTSLLDAIREARVAGGEAGGITQHIGAYQVETVSGATVTFIDTPGHAAFSAMRARGANVTDIVILVVAADDGVMEQTADSIACAKQAGVPVVVAYNK--------IDKDTADVQKVKNELMQYDLLMEEYGGDVMG--------------------------AEVSAKQRLGLDDLLEKVLLQAELLDLRANPDRAAQGAVIEARIERGLGAVGTTLIQRGTLRVGDVFLAGASWGKVRALLDTEGNRIKEAGPSVPVQVVGFNTAPLAGDTLVVVDSEATARQIAEARGGLSKTRDALALEGDLRSNLRAIFETGEALDGVERKTVNVVIKADVQGSAEALADSLRQLKARDEIGEVTVKVLAAAAGEVTKSDVALASVSDALVVAFNVAANFQAQEEARERGIDITYASIVYDVLDDLEARIQEVLSPTPDGEYAGKARVKQVFDIGKVGRIAGSEVLDGRVINGANVRVLRGPRVIHEGVMGTLKNLKADADEMVAGTECGIGLEAFEDFEEGDVIECYVV 722
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: A0A7S2Y1F3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F3_9STRA) HSP 1 Score: 633 bits (1633), Expect = 3.630e-206 Identity = 343/644 (53.26%), Postives = 450/644 (69.88%), Query Frame = 2
Query: 1421 VMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVA----------------DDSNMGGDDAVESVGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLN-GQADTGKETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVSNAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECYAL 3301
V LTEP++TV++LA M+ K AEV+K+LML++G+MATITQ+ID TA VA F+ EV ++ + G+ +V +G A+++D TL+PR PVVTIMGHVDHGKTSLLDAIR TRV GEAGGITQH+ AYQV T G +TF+DTPGHAAF+EMR+RGA+ATDIV+LVVAADDGV EQT E IA AK AG P+++A NK +DK ADVQK++N+LM +D+L EEFGG+ A VSAKQ TGL+ELLEK++LQ+EV+ELK+NP R GV++EA V+KGLG V T LIQRGT+RVGD+F+AG +WGRVRAL +D+ +I EAGPS PV++ GFD +P AG+ F VE E AR++AEAR KI+R+ SA+ L SS+ + G G E + V+IKADVQGS +AL TAL + DD+ K+L + G I + D+A+A VSNA V+GFNV A+ +A +AR N I+++Y +VVY ++D++++++ E++SPTPEG Y G+A + +FNIGKVGNIAGS V DG + KGS+V V R GR+IHE T+KTLKNVK DV++MV GTECGIQ++GFEEF+ GDIIE Y +
Sbjct: 109 VFLTEPSLTVAELAEKMREKPAEVVKYLMLNMGVMATITQTIDQKTAITVAEAFKKEVVTSTEAEAAAGQASGAEEEEDKEGEPTEGTVAAEGVALDIDDPSTLLPRPPVVTIMGHVDHGKTSLLDAIRSTRVTEGEAGGITQHIGAYQVSTSKGQPITFIDTPGHAAFNEMRSRGADATDIVILVVAADDGVKEQTAESIACAKQAGKPVLVAFNK--------IDKPGADVQKIKNQLMQYDLLMEEFGGEIMG--------------------------AEVSAKQGTGLDELLEKVMLQAEVMELKANPNRLVSGVIVEAEVEKGLGPVATTLIQRGTVRVGDIFLAGTSWGRVRALRDDSDNKITEAGPSAPVKIIGFDSLPLAGDTFIGVESEQDARNIAEARGKISRDRSASKFNTDLLSSVANIFEFGAGLDGIERKTVNVVIKADVQGSAEALATALKALKKADDFGEVTVKVLSATPGEINQGDIALASVSNALVIGFNVAANYQAQEDARKNEIEVMYATVVYEILDEMEERMQEVLSPTPEGEYIGKAEILQVFNIGKVGNIAGSNVLDGRVKKGSNVRVMRAGRVIHETTMKTLKNVKVDVEEMVAGTECGIQLQGFEEFEVGDIIESYIV 718
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: W7T2T0_9STRA (Translation initiation factor if-2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2T0_9STRA) HSP 1 Score: 584 bits (1506), Expect = 7.980e-188 Identity = 320/641 (49.92%), Postives = 439/641 (68.49%), Query Frame = 2
Query: 1403 APAPALVMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVA----DDSNMGGDDAVE-SVGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTGKETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVSNAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECYALD*K 3310
A P +V+L EPT+T++ L+ M V+ E++K+LM+++G+MATITQSIDA+T +VA F +V +D G D E SV +G E + +L+PRAPVVTIMGHVDHGKTSLLDA+RE+ V GEAGGITQH+ AYQV T +TF+DTPGHAAFSEMRARGAN TD+VVLVVAAD+GV EQT + I AK A VP+++A+NK VDK AD +V ELM +D+L EE+GGD + A VSAK+R L+ LLEKILLQ+E+L+LK+NP R+A G V+E+ ++KGLG V TVL+Q+GTLRVGD VAG A+G+VR+L ++ G+R++ AGPS+P + G+DGVP AG+ VVE E AR++AEARR++ RE S + G +++ + D K+ E+ V+IKADVQGS +A+ TA++ + EDD K+L SGVG +T++DVA+AGVS A ++ FNV AD A EAR G++I Y++V+Y+++D ++ K+ E++SPTPEG Y G A VKM+F IGKVG +AG V DG I +G +V V R I+++G L+TL+NVK+DVQ+M G ECG+ + +E+F+ DI+ECY +D K
Sbjct: 91 AQGPKVVVLDEPTLTIAALSERMDVRAGEIIKYLMVNMGVMATITQSIDAETGVRVAEAFGRQVRRGREEDEGEGEDGEEELSVLTEGYGWEEEDAASLLPRAPVVTIMGHVDHGKTSLLDAVRESSVATGEAGGITQHIGAYQV-THAHRTITFIDTPGHAAFSEMRARGANVTDLVVLVVAADEGVKEQTIDSIRCAKQAHVPILLAVNK--------VDKPGADPSRVTQELMKYDVLLEEYGGDVLS--------------------------AEVSAKKRLNLDGLLEKILLQAEILDLKANPNRSAVGAVVESRMEKGLGPVTTVLVQKGTLRVGDCIVAGAAYGKVRSLTDERGKRLETAGPSVPAVLSGWDGVPAAGDTLIVVESEMQARNVAEARRRLERERSGSATMGSMQAQVLSIFG--TDGVKKRQEVTVVIKADVQGSAEAIATAVSAIHVEDDRAEVGVKVLSSGVGDVTQNDVALAGVSQATILAFNVAADMNAQEEARKTGVEIEYHTVIYDILDKLEAKVQEILSPTPEGEYVGAARVKMVFEIGKVGKVAGCEVTDGTIKRGGTVRVLRGSEIVYKGPLRTLRNVKSDVQEMSAGQECGMSFKDYEDFRPDDIVECYVVDKK 694
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: A0A7S2B294_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B294_9STRA) HSP 1 Score: 569 bits (1467), Expect = 6.610e-181 Identity = 318/640 (49.69%), Postives = 424/640 (66.25%), Query Frame = 2
Query: 1421 VMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVADDSNMGGDDA---------VESVGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTGKETYE---LPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVSNAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECYALD 3304
+ + E V+V L+ + VKG EV+K+LM+ +GI+ ++TQ+ID TAR VA F E+ + GDD + G A+++D DTL PR PVVTIMGHVDHGKTSLLDAIR+ VV+GEAGGITQH+ AY V T G VTF+DTPGHAAFSEMR RGA+ TDIV+LV+AADDGV QT E + A+ AG P+++A NK DK ADV +V EL +D+L E+ GG+ + A VSAK ++GL+ELLEK++LQ+EVL+LK+N +RAA+G ++E ++KGLGTV T LIQRGT+RVGD F+AG A G+VR L+ D G ++ EAGPSMPVQ+ G DGVP AG+ V + E L RDLA R K+A E S+ +G LK+S+ + L D E E + V IKADV GS +AL TAL ++ +++ R K K+L SGVG +T+SD+AIA VSNA+ + FNV +A +AR ++I YYSVVY+V+D+++ ++ E++SPTPEG Y+G+A VK IF+IGKVG IAG AV DG + K ++ V R RI+HEG LKTLK+VK DVQ M G+ECG+ + +EE EGDIIE Y ++
Sbjct: 180 IFIPEGPVSVGTLSSSLDVKGPEVVKYLMMQMGILCSLTQTIDFPTARTVAVAFGKEL----KVEGDDGEXXXXXXXXTSDTQDDGFAMDMDDPDTLEPRGPVVTIMGHVDHGKTSLLDAIRQADVVSGEAGGITQHIGAYSVMTARGDKVTFIDTPGHAAFSEMRQRGADVTDIVILVLAADDGVKNQTIEALNAARQAGKPVIVAFNKC--------DKPGADVNRVATELTGYDLLIEDLGGEILS--------------------------AEVSAKTKSGLDELLEKVMLQAEVLDLKANYDRAAQGSIVEVRMQKGLGTVATTLIQRGTIRVGDFFIAGEANGKVRMLITDKGEKVTEAGPSMPVQIVGLDGVPLAGDTLLVGDDEGLLRDLAARRSKLAMEKSSVQFEGDLKNSVMERLTQMGDLQGEQLEEKEVHVCIKADVMGSAEALVTALKQLEMKNEIARVKVKVLLSGVGDVTQSDLAIADVSNAWTIAFNVATIYQAQEDARNKNLEIGYYSVVYDVLDEMEVRMKEVLSPTPEGDYTGKAEVKAIFDIGKVGKIAGCAVLDGEVLKSANFRVLRGPRIVHEGRLKTLKHVKEDVQSMSAGSECGVNFQDWEEMMEGDIIESYVMN 781
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: A0A7S3L358_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L358_9STRA) HSP 1 Score: 554 bits (1427), Expect = 3.470e-176 Identity = 313/632 (49.53%), Postives = 422/632 (66.77%), Query Frame = 2
Query: 1421 VMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVADDSNMGGD----DAVESVGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMN--DTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTGKETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVS-NAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECY 3295
V L E ++VSDLA ++ K ++K LM DLG+MA++TQS+D T V F V +M + A ES G E D ++ L PRAPVVTIMGHVDHGKTSLLDAIR+T V AGEAGGITQH++AYQV NG +TF+DTPGHAAF++MR RGAN TD+V+LVVAADDGV +QT + I A+ AGVPL++AINK DKE AD KV +L +D+L EEFGGD + + +SAK+ T L++L++KI+LQ+E+ +LK+NP+R AEG+VIEA+V+KGLGTV T LI++GT+RVGDVFVAG +GRV+AL++ D+ R+ EAGPSMPVQV GF+G+P AG++ AV + E AR LAE R++IARE ++ Q GL SS+ +G KE E+ V++KADVQGS +ALT AL E+ E+D K+L S G ++KSDVAIAGV+ ++ FNV A A +AR GI+I YY++VY+ ++ ++ ++ E++SPTPEG Y G A V+ +FNIG GNIAGS DG + KGS+V V R +I+ E +K+L++ KA+V + G ECGI + FE ++ GD+IECY
Sbjct: 106 VFLPEGPISVSDLAELIDEKPVAIIKLLMTDLGVMASMTQSLDPSTCIAVVEGFGKIVGGADDMDEELMELMAEESALSTGLVEEDDDDEDLEPRAPVVTIMGHVDHGKTSLLDAIRKTDVTAGEAGGITQHIAAYQVG-HNGKKITFIDTPGHAAFTDMRERGANVTDMVILVVAADDGVKQQTADSIMCARQAGVPLIVAINKC--------DKETADPLKVMTDLTAYDVLTEEFGGDVLS--------------------------SQISAKEGTNLDDLMDKIMLQAEIQDLKANPDRDAEGIVIEANVEKGLGTVATTLIKKGTIRVGDVFVAGATYGRVKALLSTTDSKTRLNEAGPSMPVQVVGFEGIPSAGDILAVAQDEQTARALAENRQRIARERESSFYQDGLMSSVNMVFSGG---NKEKREMCVLVKADVQGSAEALTRALRELKLENDEAVVTVKVLVSEAGEVSKSDVAIAGVTPGTTIIAFNVPASFAAMEDARNGGINIEYYNIVYDAIESVESRMQEVLSPTPEGEYVGSATVQEVFNIGGTGNIAGSRCTDGYLKKGSNVRVMRGDKILIETRVKSLRSFKAEVDSIEEGNECGIGLIDFESYEPGDVIECY 699
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: B7FU83_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU83_PHATC) HSP 1 Score: 530 bits (1365), Expect = 6.890e-169 Identity = 299/626 (47.76%), Postives = 413/626 (65.97%), Query Frame = 2
Query: 1424 MLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVADDSNMGGDDAVESVGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGR-RIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTGKETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVS-NAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECY 3295
ML + ++V DLA +++ K V+K LM DLG+MA++TQ++D+ T VA F +G ES G + D L PRAPVVTIMGHVDHGKTSLLD IR+T+V AGEAGGITQH++AYQV T+N +TFVDTPGHAAF++MR RGAN TDI+VLVVAADDGV +QT + IA A+ AGVPL++AINK D E AD KV EL ++D+L EEFGGD + + +SAK+ T +++LL+KI+LQ+E+ ++K+NP+R AE +V+EA+V+KGLGTV T L+Q+GTLRVGDVFVAG G+VRAL++ + R+KE GPS PV+V GF+GVP AG+V V + E AR++AE R++IARE S++ Q GL S+ KE+ E+ V++KADVQGS +ALT AL ++ EDD K+L S G ++KSD+AIA V+ + V+ FN+ A A ++R G+ I YY+++Y+ ++ ++ ++ E++SPTPEG Y G A V+ +FNIG GNIAGS +G + KG++V V R +I+ E +KTL+N KA+ + G ECGI + FE F+ D+IECY
Sbjct: 1 MLPDGPLSVIDLAEILEEKPVSVIKFLMTDLGVMASMTQNLDSATCVAVAEGF-------GKIG---LEESALATGVVFDEDDPADLKPRAPVVTIMGHVDHGKTSLLDTIRKTQVTAGEAGGITQHIAAYQV-TRNDQTITFVDTPGHAAFTDMRERGANITDIIVLVVAADDGVKQQTADSIACARQAGVPLIVAINKC--------DLETADPTKVMTELTSYDVLTEEFGGDVLS--------------------------SQISAKKGTNIDDLLDKIMLQAEIQDIKANPDRDAECIVVEANVEKGLGTVATTLVQKGTLRVGDVFVAGETHGKVRALLSTSNNDRMKEVGPSTPVRVVGFEGVPCAGDVLIVAKDEQTAREMAENRQRIAREKSSSSYQAGLMDSVAMTFGAV----KESREMCVVVKADVQGSAEALTRALRDLKREDDQAIVTVKVLVSEAGEVSKSDIAIASVTPDTTVIAFNIPASFAAMEDSRVTGVPIEYYNIIYDAIESVESRMQEVLSPTPEGEYVGSAKVQEVFNIGGTGNIAGSRCTNGFLKKGANVRVMRGDKILIESRIKTLRNFKAETDSIEEGNECGIGLLDFEAFEPDDVIECY 577
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: A0A1Z5KSJ3_FISSO (Translation initiation factor IF-2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSJ3_FISSO) HSP 1 Score: 539 bits (1389), Expect = 1.770e-168 Identity = 307/633 (48.50%), Postives = 422/633 (66.67%), Query Frame = 2
Query: 1421 VMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVAD--DSNMGGDDAVESVGEKGTAI-EVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMN--DTGRRIKEAGPSMPVQVGGFDGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTGKETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVS-NAFVVGFNVGADQEAAREARANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECYAL 3301
V L++ +TV++LA + K ++K LM DLG+MA++TQS+D T VA F VAD +S + GD S E G + E D E++L PR PVVTIMGHVDHGKTSLLDAIR T V AGEAGGITQH+++YQVK NG +TF+DTPGHAAF++MR RGAN TD+V+LVVAADD V +QT + I A+ AGVPLV+A+NK D E AD KV +L +D+L E+FGGD V+ +SAK+ L++LL+K++LQ+E+ L++NP+R+AE +VIEA+V+KGLGTV T L++RGTLRVGD+FVAG +GRVRAL++ D R+KEAGPS PV + GF+G+P AG++ V + E +AR+LAE+R++IARE S++ Q GL SS+ GKE E+ V++KADVQGS +ALT AL+E+ E+D K+L S G I KSD++IA V+ V+ FN A A +ARA GIDI YY+++Y+ ++ +QK++ E++SPTP+G Y G A+V+ +FNIG GNI GS DG + KG +V V R +I+ E + +L+N KA+V + G ECGI + FE+FQ D+IEC+ +
Sbjct: 272 VYLSDGPMTVAELADALDEKPVAIIKMLMTDLGVMASMTQSLDVATCIAVAQGFGKIVADVDESELEGDG---SALETGVVLDEDDDEESLRPRPPVVTIMGHVDHGKTSLLDAIRNTDVTAGEAGGITQHITSYQVK-HNGQLITFIDTPGHAAFTDMRERGANITDMVILVVAADDSVKQQTVDSIMCARQAGVPLVVAVNKC--------DLETADPIKVMTDLTAYDVLTEDFGGDV--------------------------LVSRISAKKGENLDDLLDKVMLQAEIQNLRANPDRSAECIVIEANVQKGLGTVATSLVKRGTLRVGDIFVAGETYGRVRALISTADGKTRMKEAGPSTPVNIVGFEGIPAAGDILVVSDDEQVARELAESRQRIARERSSSSYQAGLMSSVAMAFG----PGKERREMCVVVKADVQGSAEALTRALSELKLENDEAVVGIKVLVSEAGEINKSDISIASVTPGTIVIAFNCAASFAAMEDARAAGIDIEYYNIIYDAIESVQKRMQEVLSPTPDGEYVGSAVVQEVFNIGGTGNIGGSRCTDGYLRKGGNVRVLRGDKILAESKIVSLRNFKAEVDSIEEGDECGIGLFEFEDFQPNDVIECFVV 862
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Match: A0A8J2SKJ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKJ2_9STRA) HSP 1 Score: 536 bits (1380), Expect = 5.110e-168 Identity = 302/642 (47.04%), Postives = 421/642 (65.58%), Query Frame = 2
Query: 1421 VMLTEPTVTVSDLAGMMKVKGAEVLKHLMLDLGIMATITQSIDADTARKVAYNFRVEVA------DDSNMGGDDAVES----VGEKGTAIEVDAEDTLVPRAPVVTIMGHVDHGKTSLLDAIRETRVVAGEAGGITQHVSAYQVKTQNGANVTFVDTPGHAAFSEMRARGANATDIVVLVVAADDGVMEQTKECIATAKMAGVPLVIAINKARGFFSYTVDKEAADVQKVQNELMTFDILPEEFGGDTQARDGKYWKNNPPLLDTFATDFPRFPAVALVSAKQRTGLEELLEKILLQSEVLELKSNPERAAEGVVIEASVKKGLGTVGTVLIQRGTLRVGDVFVAGGAWGRVRALMNDTGRRIKEAGPSMPVQVGGF----DGVPDAGEVFAVVEKEDLARDLAEARRKIARESSAAVLQGGLKSSIQDFLNGQADTG-KETYELPVMIKADVQGSEQALTTALTEMISEDDYFRAKCKILPSGVGTITKSDVAIAGVSNAFVVGFNVGADQEAAREAR--ANGIDIVYYSVVYNVMDDIQKKLDELVSPTPEGVYSGRAIVKMIFNIGKVGNIAGSAVEDGVINKGSSVLVKRRGRIIHEGTLKTLKNVKADVQQMVTGTECGIQVEGFEEFQEGDIIECY 3295
V++ + ++V LA +++ GAEV+KHLML +G++A +TQ++D TAR V F E A DD +S G AI+ D D+L PR+PVVTIMGHVDHGKTSLLDA+RE VV+GEAGGITQ + AY V ++ A VTF+DTPGHAAF+EMR RGAN TDIVVLVVAADDG EQT + +A AK+AG P+V+A+NK +D E AD Q+V+ ELM++D++PE GGDT VA VSAK++TGL+ELLEK+LLQ+++L+LK+NP+R A G VIEA V+KGLG T L++RGTL+VGDVF AG AWG+ RAL ++ G ++EAGPS PV++ G+ D P AG+ +VV E AR LA+AR ++A ++ A L+ S F+ G KE P+++KAD GS +A+T++L + +DD R K K++ SGVG +TKSD+A+A V AFVV FNVG++ A E R + + YYSVVY+V+++I+ KL +++SPTP+G G A+VK F+IGK+G +AG VE G I K +++ V R I+++G L+TL++VK DV+++ G++CG+ +EE + GDI+E Y
Sbjct: 191 VIVPDEPISVGALAELLEKSGAEVVKHLMLKMGVLAAVTQNVDGATARLVVEGFGREWAASADEIDDXXXXXXXXXDSGPALALSSGIAIDEDDPDSLQPRSPVVTIMGHVDHGKTSLLDALREADVVSGEAGGITQGIGAYVVPVKDRA-VTFIDTPGHAAFTEMRERGANVTDIVVLVVAADDGCKEQTVDSLACAKLAGAPVVVAVNK--------MDVEGADAQRVEGELMSYDLVPESAGGDT--------------------------LVARVSAKEKTGLDELLEKVLLQADLLDLKANPDRPATGTVIEAGVEKGLGVCATTLVERGTLKVGDVFTAGAAWGKCRALQDEFGNSLEEAGPSTPVRLVGWTTGADRAPRAGDALSVVPDEPTARKLADARNELANQARDAKLRAASSSGFDKFMANLGGEGIKEERTFPIVLKADTAGSVEAITSSLEGLDVQDDVSRVKAKVIYSGVGDLTKSDIAVASVQGAFVVAFNVGSNAAAMDEERRLSGAVRTNYYSVVYDVLEEIEGKLQKVLSPTPDGELVGTAVVKQCFDIGKLGKVAGCGVETGWIRKSANIRVMRGDAIMYQGRLRTLRSVKVDVERIDAGSDCGLSFRDWEEVEVGDIVEAY 797 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1490.3373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1490.3373.1 >prot_F-serratus_M_contig1490.3373.1 ID=prot_F-serratus_M_contig1490.3373.1|Name=mRNA_F-serratus_M_contig1490.3373.1|organism=Fucus serratus male|type=polypeptide|length=1055bp MRAAMAGRYGVLILALLRAWSSRAFMQPRCPGTLACRGMSNFGAKACKRMback to top mRNA from alignment at F-serratus_M_contig1490:132661..157156+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1490.3373.1 ID=mRNA_F-serratus_M_contig1490.3373.1|Name=mRNA_F-serratus_M_contig1490.3373.1|organism=Fucus serratus male|type=mRNA|length=24496bp|location=Sequence derived from alignment at F-serratus_M_contig1490:132661..157156+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1490:132661..157156+ >mRNA_F-serratus_M_contig1490.3373.1 ID=mRNA_F-serratus_M_contig1490.3373.1|Name=mRNA_F-serratus_M_contig1490.3373.1|organism=Fucus serratus male|type=CDS|length=6330bp|location=Sequence derived from alignment at F-serratus_M_contig1490:132661..157156+ (Fucus serratus male)back to top |