mRNA_F-serratus_M_contig1490.3370.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: D7G2G8_ECTSI (Glucose-methanol-choline oxidoreductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2G8_ECTSI) HSP 1 Score: 639 bits (1647), Expect = 2.760e-219 Identity = 349/628 (55.57%), Postives = 428/628 (68.15%), Query Frame = 2
Query: 137 MAEPIEVDTVDCDFLIVGAGSSGCVLASRLVRRGLKVLLVEKGTTDAGKLGKLVRRPSEWMPVATGRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYNGHWPWKLEAIEASFESIESELTLEEPRSSSTVGPSWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGR-----RSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADFAEDGLHGMAYIRCPLRPE---PGGSEIVVDNDG--------SKTNEDA-SSLVQGFMFADGGKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASG-DPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLGDMATKNQVQVRMFEAASKSVN 1966
+A P DTVDCDFLIVGAGSSGCVLASRLVR GLKVLLVEKG DA L K+V RPS W+ A+ L + F TVPQA L R + A G GGGGSSN+NAGLY RGREEDY HWPW+L+ IEASF+SIE+ELTLEE ++ TV PS RMLEE+G K S D + T+ TWT+ GLGGC RTT RGGE Q+AW+AF+ PVT MPNL+IK D+ V+RVIIE GRAVG+E++E P W R+R+RQLRLA + AEIV+C G FR+PKLLMLSGVGP+ HLE+KGVPV+V+MPHVG+NLQDHLI + ++SKT M+ AD+ ED H Y C L E P G S+T + + V G + DG + + ++ + G GA+ R V ++WV LTPL+ I++ +R +++T+VKS+GTVRLASG D PVIDP Y SHP D +A+ WRT+RRAK ET TG+AV G+E+ PGK FN+ DD+SFL F + +FHPVGTCRMG+ +DSVVSAD LRVHG+SGLRVADASVAP IP+ PTQAM MMIGDRAAA+ L D K QV+ RM E AS S+N
Sbjct: 3 VASPTADDTVDCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADASTLAKVVGRPSGWVHQASSGEGLSEAFNTVPQAGLGYRELPAYNGVGGGGSSNVNAGLYQRGREEDYEKHWPWELKDIEASFKSIEAELTLEELPTTGTVAPSCARMLEEVGFKSPPRPSSSRSEDGY-TEP---TWTRLGLGGCPMKRTTTRGGERQTAWSAFVRPVTTMPNLKIKDDAAVSRVIIEGGRAVGVEVVESAPGWXXXXXXXXRTRVRQLRLAKDRAEIVVCCGAFRSPKLLMLSGVGPRRHLEEKGVPVVVDMPHVGENLQDHLILATSNISKTRMTEADYTEDSFHSATYFSCALPQEAAAPAGXXXXXXXXXXXXXXXXXSRTEAPSPGAAVVGVLHGDGSFLVRNLSGLITMLFVRPGLFGAVGRGVVLAVIWVATWLTPLTRILRGTRCNVMLVTSVKSKGTVRLASGTDAAAPPVIDPGYFSHPQDRRAMLECWRTIRRAKRETTTGRAVFGFELLPGKKFNDCDDDESFLKFAREFCLPYFHPVGTCRMGREVQDSVVSADDLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAKEQVKARMIETASSSIN 626
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: L1JH16_GUITC (GMC_OxRdtase_N domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JH16_GUITC) HSP 1 Score: 286 bits (731), Expect = 1.650e-83 Identity = 205/616 (33.28%), Postives = 296/616 (48.05%), Query Frame = 2
Query: 107 EGRTGRLHPDMA--EPIEVDTVDCDFLIVGAGSSGCVLASRLVRRGLKVLLVEKGTTDAGKLGKLVRRPSEWMPVATGRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYNGHWPWKLEAIEASFESIESELTLEEPRSSSTVGPSWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADFAEDGLHGMAYIRCPLRPEPGGSEIVVDNDGSKTNEDASSLVQGFMFADGGKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPE---------DSVVSADS-LRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLGDMATK 1918
EG G+ D A E ++D + CD+L+VG G S C L + L G V++VE G + + K+V P W A+ P+ + TVPQ + ++ M A RG G GG+ N+NA ++CRGR EDY WPWKLE IE FE E L ++ + + G + M+ E G K + W ++G+ G SAW ++P A +++ V+RVI +R + +VLC+G F +PK+L+LSG+G E LE+K VP L+N P+VG++LQDHLI + ++ P+ D + G HGM ++ +I+ D E L G + G + S+++S + L +V ++ F++ + W+++ S A + + +SRG VRL S DP P+IDP YLS D + W T + KT + + +L E+ PG G F + K A S+FHPVGTCRM G E SV D+ LRVHG GLR+AD SVAPRIPS PTQAMA MIG +AA L+LG K
Sbjct: 12 EGHDGKEEIDKAWDENKDLD-LHCDYLVVGGGCSSCSLVACLAAAGKSVVVVEAGGAEPWER-KVVDDPQSWFAAASHGRPVSRLYRTVPQLAVLSKLMPAFRGEGFGGTGNVNACIWCRGRREDYQ-QWPWKLEDIEKGFEFAERSLRVKRVPAKGS-GAAMCAMMRESGFKTC----------------KEELWAEDGVAEGLYATVQGEAGTRTSAWKELVSPWIAKGRVKVYPHCNVSRVIFDRKK-------------------------------VVLCAGAFDSPKILLLSGIGDPEELEEKTVPPLINNPNVGRHLQDHLILVAAFAARKPLRSCDTNDIGTHGMCHVTIRRESRRRHGQILF-KDSWNAWEVLPELCSGMVL--GQNIGSEVISRVVL----------IVCKLVFYIPGI-------KWMLRQSLTAGICMMDPRSRGRVRLRSNDPRDPPLIDPRYLSEESDLVLLHDLWSTFKSVKTSPSAKEWILA-ELLPGAPLMYGESMSWFKWWVKLACSSYFHPVGTCRMPSGKEWETRQSNELSSVSVVDAFLRVHGTVGLRIADCSVAPRIPSAPTQAMAYMIGYQAAQLMLGTRTPK 555
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: A0A836CG94_9STRA (GMC_OxRdtase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG94_9STRA) HSP 1 Score: 233 bits (593), Expect = 8.050e-63 Identity = 208/678 (30.68%), Postives = 303/678 (44.69%), Query Frame = 2
Query: 140 AEPIEVDTVDCDFLIVGAGSSGCVLASRLVRRGLKVLLVEKGTTDAGKLGKLVRRPSEWMPVATGRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYNGHWPWKLEAIEASFESIESELTLEEPRSSSTVGPSWERMLEEIGCK-RAYPTGEEASLDSHGTDDRR--ITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERG----------------------------------RAVGIELLEYFPTWRGRRSRLR-----QLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDH-LIGTSMHLSKTPMSPADFAEDG--LHGMAYIRCPLRPEPGGSEIVVD-----NDGS------------------------KTNEDASSLVQGFMFADG-GKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSR-----LANVVLT--TVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETA--------TGKAVLGYEISPGKGFNNGR-DDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVL 1900
A IE +DC++L+VG+G++GC SRLVR+G KV+L+ G+ DA + ++ P+ ++ PL D + PQ L RR G GGGGS+ INA +Y RGR DY WPW L+ +E F ++E+ L + L G +A + A LD R + W ++G+ A+ + G SAW AF+AP+ NL I + TRV+++ G RAVG+E + R + LR +LRL+N AE++LC G TP+LLMLSG+GP+ HLE + V V+ P VG LQDH ++ + L++ ++P + A G GM R P E+V D DGS + + + A+G G S+Q + + G R + +++ + +V R +A++ LT T +SRG VRL S DP PV DP YLS +D A+ A R +R + G EI PG + + D + + + +H +C MG + + A+ LRV G LRVADAS AP +PS TQAMAMM+GDRAAAL+L
Sbjct: 8 APDIEDIVLDCEYLVVGSGAAGCAFVSRLVRQGAKVVLLTDGSIDAFR-DPGIQAPASFLSNLQRGWPLCDPHFSAPQPQLAGRRSLTFVGRGGGGSTLINACIYIRGRRSDYAA-WPWSLDFVEEGFAAVEAVL---------------QPALIPAGVTGKALASAMSAGLDLAPAPQREDAVGWVRDGVR--ADMHFSIHAGRRVSAWQAFMAPLVGRSNLTILDRHIATRVLLDGGGGXXXXXXXXXXXXDXXXXXXXXXXXXXXXGSAPRAVGVEAVVADDAAATRAAALRSGRRVRLRLSNPAAEVILCCGALYTPQLLMLSGIGPRAHLETHDINVEVDAPGVGAGLQDHPMVPVARELTRA-LAPHELAPGGHIFEGMVDFRV----APATGELVKDIGDSGGDGSXXXXXXXXXXXXXXXXXXXXXXXESSGDGNPPICFQLTLANGRGAASAQAFLVPLVGPNSRAGAG---RAAAARVALERLKMRAVLALVPSLRDAAMPVASMYLTLETPRSRGAVRLRSADPADLPVFDPRYLSAEEDRAALRGALRAVRATAXXXXXXXXXXXXAADDIFGAEILPGPAYGDAAASDADLDRYIVEWSVTQWHAAASCAMG-----AALDAE-LRVRGARALRVADASAAPALPSANTQAMAMMVGDRAAALLL 652
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: A0A8I1R2V6_9HYPH (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Bosea sp. TaxID=1871050 RepID=A0A8I1R2V6_9HYPH) HSP 1 Score: 224 bits (571), Expect = 6.460e-61 Identity = 200/592 (33.78%), Postives = 281/592 (47.47%), Query Frame = 2
Query: 173 DFLIVGAGSSGCVLASRLVRRGL-KVLLVEKGTTDAGKLGKLVRRPSEWMPVATGRS---PLVD-NFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYN-----GHWPWKLEAIEASFESIESELTLEEPRSSSTVGPSWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLG----GCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTP-MSPADFAEDGLHGMAYIRCPLRPEPGGSEIVVDNDGSKTNEDASSLVQGFMFADGGKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLG 1903
D +IVGAGS+GCVLA RL G VL+VE G D R P +P+ G++ P ++ + TV Q L R ++ RG GGSS+INA +Y RG+ ED+ G+ W + A++ +E SSS G +EEI +A+P L + + + + G G + T RGG +SA AF+ P LR++ D++VTR+++E+ RAVG+E+ R +++ E+VL G F +P+LL LSG+GP E L G+ L ++P VG+NLQDHL ++ S+ P ++ A + GM R P + +T + S F+ + V +R F G S V R A SRG V + S DP AP I P YL+ P+D + A R LRR T T A++ EI PG D+ + L+ + A+S FHP GTCRMG P +VV A LRVHGV GLRVADAS+ P IPS A AMM+G+RAAAL++G
Sbjct: 5 DVIIVGAGSAGCVLAGRLADAGWGTVLVVEAGPQD--------RSPWIHLPIGYGKTFYHPRLNWMYRTVSQPALDGREIYQPRGKVVGGSSSINAMVYARGQAEDFEEWERLGNPGWGWAEVLAAYRRMEDHAL----GSSSWHGAGGPLHVEEI-AGQAHPL---TPLFIEAAGEAGLPFNADLNGASCEGAGFYQITTRGGRRESAARAFLHPARRRGRLRLETDALVTRILVEQRRAVGVEV-----------HRGGEIQRYRARREVVLAGGAFNSPQLLQLSGIGPPELLASHGIAPLRDLPAVGRNLQDHLCYDHVYRSRQPSLNEALLSWPARVGMVANYLLRRRGPLSLSVNQGGGFFRTRPELSRPDMQLYFSP--LSYERAVPGVRALMKPDPFPG-------------------FSLSVSPCRPA--------SRGHVAIRSPDPRLAPEIAPNYLAEPEDIHTLLAGARFLRRLAA-TPTLAALIDAEIRPGP---EAADEDAHLAAIRRNAYSVFHPCGTCRMGPDPRTAVVDA-RLRVHGVEGLRVADASIFPTIPSGNINAPAMMVGERAAALMMG 535
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: A0A4P6X8I9_9SPHN (Glucose-methanol-choline oxidoreductase n=1 Tax=Sphingomonas sp. AAP5 TaxID=1523415 RepID=A0A4P6X8I9_9SPHN) HSP 1 Score: 221 bits (562), Expect = 1.350e-59 Identity = 179/615 (29.11%), Postives = 275/615 (44.72%), Query Frame = 2
Query: 173 DFLIVGAGSSGCVLASRLVRRGLK-VLLVEKGTTDAG---------KLGKLVRRPS---EWMPVATGRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYNGHWP------WKLEAIEASFESIES-------------ELTLEEPRSSSTVGPSWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADFAEDGLHGMAYIRCPLRPEPGGSEIVVDNDGSKTNEDASSLVQGFMFADGGKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLGDMATKN 1921
D++++G+GS+G ++A+RL K V L+E G +D G +G + P W TG + + + P+ LF GGSS+IN +Y RG+ EDY+G W W +A+ +F+S E+ EL +++PRS + + P++ EE G H +D ++G G +R G S+ AF+ P PNL + +++V R++++RGRA GIE+ R + + E++LC G +P+LLMLSG+GP++HL + G+PV+ +P VG NLQDH ++H++ S +A I PLR ++F G ++S + T L +VR V ++ + KH + + L +S G+VRLAS DP P+IDP + ++ +D + + RR + A A+ G EI PG ++ L + A+ HP GTCRMG + V LRV G++GLRV DASV P I S T A MMI RAA +L D T N
Sbjct: 5 DYIVIGSGSAGSLMANRLSADPSKQVALIEAGPSDRGFPANLKTAIPVGNIFLLPHAKYNWQHHLTGNAAVGGRTINFPRGKLF------------GGSSSINGSVYIRGQREDYDG-WAASGVEGWTYDAVLPAFKSFENYAGGTSSRHGVGGELDVQKPRSINPLTPAFLAATEEAG---------------HRPNDDFAGPVQDGFG---RYDLNQRNGTRLSSARAFLHPALKRPNLTVFDETLVRRILVDRGRATGIEI-----------ERAGAISTLDATREVILCGGAINSPQLLMLSGIGPEDHLREHGIPVVHPLPGVGANLQDH---PTVHIAMENPSGESYAMSKRSWPRMIASPLR---------------------------YLFRRDGMLASNVAEAGGFVRT----LPELVRPDVQMTFLVGLKSNARTIPSKHGYMILIQLLRPRSTGSVRLASADPADKPIIDPNFFAYREDLDTLMRGFSEARRITQQPAFA-AMTGAEIEPGLAVQTDAQLEAALRAMVNTAY---HPTGTCRMGADGDPMAVLDHRLRVRGIAGLRVVDASVMPSIVSGNTSAPTMMIAQRAAQFILEDAVTSN 539
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: A0A536VLU7_9PROT (Choline dehydrogenase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536VLU7_9PROT) HSP 1 Score: 221 bits (562), Expect = 1.610e-59 Identity = 194/627 (30.94%), Postives = 293/627 (46.73%), Query Frame = 2
Query: 164 VDCDFLIVGAGSSGCVLASRLVR-RGLKVLLVEKGTTDAGKLGKLVRRPSEWMPVATGRSPLVDN------FVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYN-----GHWPWKLEAIEASFESIESE-------------LTLEEPRSSSTVGPSWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADFAEDGLHGMAYIRCPLRPEPGGSEIVVDNDGSKTNEDASSLVQGFMFA--DGGKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLGDMATKNQVQVRMFEAASKSV 1963
++ D++++G GS+GCVLASRL + V L+E G +D L + P+ G + L N F TVPQ L RR + RG GGSS++NA +Y RG+ EDY+ G+ W + + F+ E L + + RS + GP + E G + + + D +G T+EG+G + T + GE SA A++ P A PNLR+ ++VTR++ E RAVG+EL + L+ E++LC+G ++P++LMLSG+GP HL G+ V+ ++P VG+NL DH+ + A +D L G++ +R G E G T A + GF+ + D Q ++ H R+ F H +V L KSRG+V LAS DP AP+IDP +L DD + + ++ +RR ++ A + GY N D++ F + A + +HP G+CRMG GP D VV A+ LRVHG+ GLRV DASV PR+ S T A +MI ++AA L+ G +T EA + ++
Sbjct: 1 MEFDYVVIGGGSAGCVLASRLSEDAAVSVCLIEAGPSDKSVL---IHCPA-------GLAVLAKNGVANWAFATVPQPGLNGRRGYQPRGKVLGGSSSVNAMIYARGQREDYDAWAAAGNPGWGYDEVLPYFKKAEHNERGADAFHGVGGPLNVMDLRSPNRFGP----VFVEAGRQAGFAV----NADFNGA-------TQEGVG---MYQVTHKNGERFSAAKAYLTPNLARPNLRVLTGALVTRIVTEGRRAVGVELRD-----------ASGLQRVQARREVLLCAGALQSPQILMLSGIGPAAHLRAHGIDVVHDLPGVGQNLHDHI-------DVVMVVNAPRLKD-LFGLSVAGL-VRVVKGIFEWRRQRSGMLTTNFAEA--GGFIKSTPDEATPDLQFHFVVGKLVDHG-------RKTVF----------------GHGYSCHVCLLRPKSRGSVTLASADPAAAPLIDPNFLHERDDAERLVRGFKLMRRILSQPA----LAGYGGRESAASANAVSDEAIERFVRDHADTIYHPAGSCRMGPGPND-VVDAE-LRVHGMQGLRVVDASVMPRVVSGNTNAPTIMIAEKAADLIRGAASTTASSTQPQREATTSAI 548
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: Q11BZ9_CHESB (Glucose-methanol-choline oxidoreductase n=1 Tax=Chelativorans sp. (strain BNC1) TaxID=266779 RepID=Q11BZ9_CHESB) HSP 1 Score: 219 bits (559), Expect = 3.640e-59 Identity = 189/604 (31.29%), Postives = 292/604 (48.34%), Query Frame = 2
Query: 173 DFLIVGAGSSGCVLASRL-VRRGLKVLLVEKGTTDAGKLGKLVRRPSEWMPVATGRSPLVD-NFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYNGHWP------WKLEAIEASFESIES-ELTLEE------PRSSSTV---GPSWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADFAEDGLHGMAYIRCPLRPEPGGSEIVVDNDGSKTNEDASSLVQGFMFADGGKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLGDMATKNQVQ 1930
D++I+GAG++GCVLA+RL RG +VLL+E G D L + P+ + + ++ +VD + TV Q +L NR M RG GGS+++N +Y RG D++G W W + + F+ +E+ EL + P S++ V P + +E G + YP ++ + S +EG G +R SA A++ P PNL + +++V+RV+IE GRAVG+E+++ GR+S++R+ R E++LC G +P+LL LSG+GP+ L GV +VN+ VG NLQDHL K P+S PL+ G ++ + N G +L V S+ +M H F+G M + +V +H +A ++ S GT+R+ S DP P+IDP YLS P+D + + R R + A + +E +PG D+ + + A S FHPVGTC+MG P V D LRVHG+ GLRV DAS+ P++ S T A MMI ++AA ++L + T++ Q
Sbjct: 3 DYIIIGAGAAGCVLANRLSADRGCEVLLIEAGGPDRNPL---IHMPAGYFGLM--KTGVVDWGYHTVAQRHLDNRVMFWPRGKTVGGSTSVNGMVYVRGHPNDFDG-WAQMGNQGWSYDDVLPYFKRLENWELGADAFHGSGGPVSTTRVKNLSPLSKAFIE-AGVQAGYPYTDDVNAAS-----------QEGFGPMDGYVANKRR---VSAATAYLRPAMTRPNLTVLTNTLVSRVLIENGRAVGVEIVK------GRQSQVRRAR-----REVILCGGSINSPQLLQLSGIGPEAVLSSAGVDTIVNLQGVGANLQDHLAAGVKLAIKKPLSLYPHTR-----------PLKAALGLAQYFLTNSGPCVYSGGEALAF---------VRSRPELVMPDLQYH--FVGLMYEDCGRIIV------------PRHGVMAYFNISHPHSHGTIRIKSADPRQHPMIDPNYLSSPEDVRLMREGVRIGREVFAQAAFNE-YRDFEYAPGAHMT---DENDIDRYIRENANSTFHPVGTCKMGSDP--MAVVDDRLRVHGIEGLRVVDASIMPKLISGNTAAATMMIAEKAADMILKTVDTESAKQ 534
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: A0A2S0MF83_9BURK (Glucose-methanol-choline oxidoreductase n=1 Tax=Ottowia oryzae TaxID=2109914 RepID=A0A2S0MF83_9BURK) HSP 1 Score: 219 bits (558), Expect = 6.920e-59 Identity = 197/608 (32.40%), Postives = 282/608 (46.38%), Query Frame = 2
Query: 158 DTVDCDFLIVGAGSSGCVLASRLVRR-GLKVLLVEKGTTDAGKL-----GKLVRRPSEWMPVATGRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYNGHWP------WKLEAIEASFESIESELTLEEPRSSSTVGP------SWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADFAEDGL--HGMAYIRCPLRPEPGGSEIVVDNDGSKTNEDASSLVQ-GFMFADGGKVSS---QIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADS-LRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLGD 1906
DT + D++IVGAGS+GCVLA+RL + V L+E G D L G ++ P++ A F TVPQ L RR + RG GGSS+INA LY RG DY+ HW W + + F+ E+ + T GP + L E+ + A G +AS D +G + G + T + GE SA A++ P A PNLR+ +V RV+ E RA G+ E G+ +L+Q+R E +++C G F +P+LLMLSG+GP +HL G+PV+ ++P VG+NLQDH+ + PAD A G G A I +R + +T S + G F G +V Q++ ++ +A H+ L W H +V L SRG VRLA DP AP+IDP +LS D I L++ E+ AV G ++ P D ++ ++ A + +HPVGTCRMG D + D+ LRVHGV GLRV DAS+ P + T A +MIG++AA ++ D
Sbjct: 4 DTPEFDYVIVGAGSAGCVLAARLSEDPAVSVCLLEAGGPDTSVLVHAPVGAVLMIPTKINNYA---------FQTVPQPGLNGRRGYQPRGKTLGGSSSINAMLYVRGNRWDYD-HWASLGNPGWSFDEVLPYFKRSENNEQMGSDPLHGTGGPLNVTYPNHRSPLSELFIQAAATQGIQASADCNGATQQ----------GAFIYQVTHKNGERCSAAKAYLTPHRARPNLRVITHAVSARVLTENRRATGVAYYE------GKGDQLKQVRARRE---VIVCGGAFGSPQLLMLSGIGPADHLRQLGIPVVHDLPGVGQNLQDHI-----DYVQNWRVPADTATFGFSARGTAKIASAIR----------EWRQRRTGMICSPFAEAGAFFCSGPEVQVPDLQLIFVIAVADDHA---------------------RKLHW--GHGVSCHVDLLRPFSRGEVRLADKDPRTAPLIDPRFLSDERDLP-ILVKGAQLQQRVMESKPLDAVRGKQMYP----TRADDVAGLIADIRNRADTQYHPVGTCRMGN---DRLAVVDARLRVHGVDGLRVVDASIMPTLIGGNTNAPTIMIGEKAADMIRED 536
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: A0A858ST65_9RHOB (Choline dehydrogenase n=1 Tax=Roseobacter ponti TaxID=1891787 RepID=A0A858ST65_9RHOB) HSP 1 Score: 218 bits (555), Expect = 1.410e-58 Identity = 204/610 (33.44%), Postives = 270/610 (44.26%), Query Frame = 2
Query: 173 DFLIVGAGSSGCVLASRLVRRG-LKVLLVEKGTTDAGKLGKLVRRPSEWMPVATGRS----PLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDY-------NGHWPWK-----LEAIEASFESIESELTLEEPRSSSTVGPSWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADFAEDGLH--------GMAYIRCPLRP-----EPGGSEIVVDNDGSKTNEDASSLVQGFMFADGGKVSSQIVSIMRLATTHSGFL-GAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHP-DDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVLGD 1906
DF+IVGAGS+GCVLA+RL G VLL+E G +D P WMP+ G++ L + P L NRR + RG GGSS+INA +Y RG+ D+ N W W E + + P ST+ P M C+ G+E H D +EG+G NT RGG SA A+I P PNLRI+ + TRV+ E RA G+E RR LRQ A E+VL +G +P+LL +SGVGP+ L +G+ VL N+P VG+NLQDHL ++ SK P D LH GM Y+ P G + D ++ N + A GK + SGFL GA T SRG + ++S DP APVI P YLS D ++ + AW + A++ + G V+ E PG D+ L++ + A + FHPV TCRMG VV A LRVHGVSGLRV DASV P + S T A +M+G++ A L+L D
Sbjct: 5 DFIIVGAGSAGCVLANRLSENGKYTVLLLEAGGSDL--------HPWIWMPIGYGKAFHHKRLNWRYQAEPDPALNNRRSYWPRGRVMGGSSSINAMVYIRGQPADFDDWEAMGNPGWGWNDVLPFFRRSETNDRGGDDLRGGSGPLHISTMDPFLHPM-----CQTFIAAGQENQWP-HNPDFNGAC--QEGVGTYQNTA---RGGMRMSAARAYIGPAKRRPNLRIEKHAQATRVLFEGARATGVEY--------SRRGALRQ---AGARREVVLSAGAVNSPQLLQVSGVGPEAVLRAQGIKVLHNLPGVGRNLQDHLAVDFLYRSKVPT-----LNDQLHSWQGKLRQGMRYVLTRGGPLSLGVNQAGGFVKSRPDAARPNIQLYFSPVSYTKAPPGKRP------LMNPDPFSGFLTGAQPTRPT-------------------------------SRGYLEISSPDPMAAPVIHPRYLSTELDVQEMLEGAWLLRKLAQSPSLAG--VIEQETRPGADIGT---DEDMLAYIRETAGTVFHPVSTCRMGPDVTCDVVDA-RLRVHGVSGLRVVDASVFPTVTSGNTNAPTIMVGEKGADLILSD 536
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Match: A0A0Q7TI19_9HYPH (Choline dehydrogenase n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A0Q7TI19_9HYPH) HSP 1 Score: 218 bits (554), Expect = 1.570e-58 Identity = 199/597 (33.33%), Postives = 280/597 (46.90%), Query Frame = 2
Query: 173 DFLIVGAGSSGCVLASRLVRRGL-KVLLVEKGTTDAGKLGKLVRRPSEWMPVATGR---SPLVD-NFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYNGHWP------WKLEAIEASFESIESELTLEEPRSSSTVGP-------SWERMLEEIGCKRAYPTGEEASLDSHGTDDRRITWTKEGLGGCANTRTTRRGGEPQSAWAAFIAPVTAMPNLRIKGDSVVTRVIIERGRAVGIELLEYFPTWRGRRSRLRQLRLANEEAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGKNLQDHLIGTSMHLSKTPMSPADF---AEDGLHGMAYIRCPLRPEPGGSEIVVDNDGSKTNEDASSLVQGFMFADGGKVSSQIVSIMRLATTHSGFLGAMVREVTFFLVWVLMRLTPLSWIVKHSRLANVVLTTVKSRGTVRLASGDPTCAPVIDPAYLSHPDDEQAIAAAWRTLRRAKTETATGKAVLGYEISPGKGFNNGRDDKSFLSFFKHAAFSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSGLRVADASVAPRIPSVPTQAMAMMIGDRAAALVL 1900
D +I+GAGS+GCV+A +L G K+L++E G D R P +P+ G+ +P V+ + T P L NRR++ RG GGSS INA +Y RG+ EDY+G W W + + IE L GP S L + K G + D +G T EG+G + T R G +SA AF+ P +R++ +++VTR++ + RAVG+E ++ +++ + AEI+LC G F +P+LL LSG+GP L + G+ V+ + P VG+N QDHL ++ S P D A G+AY L G + V+ G GF + I +L + + A R V LM+ P S +V KSRG V + S DPT AP I P YLSH DD + + R L A T T ++ E++PG ++ D L + A+S FHP GTCRMG P D VV +LRV+GV GLRVADAS+ P +PS T A AMM+G RAA L+L
Sbjct: 5 DTIIIGAGSAGCVIAGQLAAAGTRKILVLEAGPHD--------RSPWLHLPIGYGKMFYNPAVNWMYETEPVPGLANRRIYQPRGKVVGGSSAINAMVYSRGQAEDYDG-WEALGNRGWGWPDVLRLYRRIEDH-DLGASEWHGAGGPLHITDIASTAHPLTALFIKAGAEVGLSFNPDLNGA-------TTEGVG---TYQITTRRGIRESAARAFLRPAMRTGRVRVEAETLVTRILFDGRRAVGVECRQH-----------GEVKTFHANAEIILCGGAFNSPQLLQLSGIGPGALLREHGIDVISDSPAVGRNFQDHLCYDHVYKSTRPSLNDDLLPLAGKLRVGLAY----LLGRRGPLSLSVNQGG------------GFYRSRPELARPDI----QLYFSPLSYTKAPPR------VRALMKPDPFSGFS-----TSVSPCQPKSRGHVAIRSADPTVAPEIAPNYLSHQDDVDTLLSGARFLC-ALARTPTFNDLVREELAPGAARHS---DAELLDDIRQRAYSVFHPSGTCRMGVDPADCVVDP-ALRVYGVEGLRVADASIFPTVPSGNTNAPAMMVGARAAELIL 534 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1490.3370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1490.3370.1 >prot_F-serratus_M_contig1490.3370.1 ID=prot_F-serratus_M_contig1490.3370.1|Name=mRNA_F-serratus_M_contig1490.3370.1|organism=Fucus serratus male|type=polypeptide|length=611bp MAEPIEVDTVDCDFLIVGAGSSGCVLASRLVRRGLKVLLVEKGTTDAGKLback to top mRNA from alignment at F-serratus_M_contig1490:36242..57104+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1490.3370.1 ID=mRNA_F-serratus_M_contig1490.3370.1|Name=mRNA_F-serratus_M_contig1490.3370.1|organism=Fucus serratus male|type=mRNA|length=20863bp|location=Sequence derived from alignment at F-serratus_M_contig1490:36242..57104+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1490:36242..57104+ >mRNA_F-serratus_M_contig1490.3370.1 ID=mRNA_F-serratus_M_contig1490.3370.1|Name=mRNA_F-serratus_M_contig1490.3370.1|organism=Fucus serratus male|type=CDS|length=3666bp|location=Sequence derived from alignment at F-serratus_M_contig1490:36242..57104+ (Fucus serratus male)back to top |