mRNA_F-serratus_M_contig1490.3369.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: D7G2G8_ECTSI (Glucose-methanol-choline oxidoreductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2G8_ECTSI) HSP 1 Score: 633 bits (1633), Expect = 2.330e-219 Identity = 342/632 (54.11%), Postives = 430/632 (68.04%), Query Frame = 1
Query: 43 MAEPIEVDTVDCDFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPVATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWPWKLEDIEASFESIESELTLEEPRSSGTVELSWERMLEEIGCKRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGG-----RSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGLHGMAYIRCPLRSDSGDSEISIDSGA----------------SKTNEDA-SSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIAKHSRAANVALTTVKSRGTVRLASG-DPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLGDMATKNQVQVRRQCTRTSKI 1869
+A P DTVDCDFL+VGAGSSGCVLASRLVR GLKVLLVEKGP DA L K+V RPS W+ A+S L + F TVPQA L R + A G GGGGSSN+NAGLY RGREEDY+ HWPW+L+DIEASF+SIE+ELTLEE ++GTV S RMLEE+G K S D + TWT+ GLGGC RTT R GERQ+AW+AF+ PV MPNL+IK D+AV+RVIIE GRAVG+E++E P W R+R+RQLRL+ + AEIV+C G FR+PKLLMLSGVGP+ HLE+KGVPV+V+MPHVG NLQDHL+ ++ ++SKT+M+ AD+ ED H Y C L E + +G S+T + + V+G + DG + + ++ + + G GA+ R V+ ++W+ LTPL+ I + +R + +T+VKS+GTVRLASG D PPVIDP Y SHP D +A+ WR +RRAK ET TG+AV G+E+ PGK+FN+ DD+SFL F + +FHPVGTCRMG+ +DSVVSAD LRVHG+S LRVADASVAP IP+ PTQAM MMIGDRAAA+ L D K QV+ R T +S I
Sbjct: 3 VASPTADDTVDCDFLIVGAGSSGCVLASRLVRAGLKVLLVEKGPADASTLAKVVGRPSGWVHQASSGEGLSEAFNTVPQAGLGYRELPAYNGVGGGGSSNVNAGLYQRGREEDYEKHWPWELKDIEASFKSIEAELTLEELPTTGTVAPSCARMLEEVGFKSPPRPSSSRSEDGY----TEPTWTRLGLGGCPMKRTTTRGGERQTAWSAFVRPVTTMPNLKIKDDAAVSRVIIEGGRAVGVEVVESAPGWXXXXXXXXRTRVRQLRLAKDRAEIVVCCGAFRSPKLLMLSGVGPRRHLEEKGVPVVVDMPHVGENLQDHLILATSNISKTRMTEADYTEDSFHSATYFSCALPQ-----EAAAPAGXXXXXXXXXXXXXXXXXSRTEAPSPGAAVVGVLHGDGSFLVRNLSGLITMLFVRPGLFGAVGRGVVLAVIWVATWLTPLTRILRGTRCNVMLVTSVKSKGTVRLASGTDAAAPPVIDPGYFSHPQDRRAMLECWRTIRRAKRETTTGRAVFGFELLPGKKFNDCDDDESFLKFAREFCLPYFHPVGTCRMGREVQDSVVSADDLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAKEQVKARMIETASSSI 625
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: L1JH16_GUITC (GMC_OxRdtase_N domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JH16_GUITC) HSP 1 Score: 282 bits (721), Expect = 1.700e-83 Identity = 202/596 (33.89%), Postives = 286/596 (47.99%), Query Frame = 1
Query: 76 CDFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPVATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWPWKLEDIEASFESIESELTLEEPRSSGTVELSWERMLEEIGCKRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGLHGMAYIRCPLRSDSGDSEISIDSGASKTN---EDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPE---------DSVVSADS-LRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLGDMATK 1824
CD+L+VG G S C L + L G V++VE G + + K+V P W A+ P+ + TVPQ + ++ M A RG G GG+ N+NA ++CRGR EDY+ WPWKLEDIE FE E L ++ + G+ M+ E G K EE+ W ++G+ G R SAW ++P A +++ V+RVI +R + +VLC+G F +PK+L+LSG+G E LE+K VP L+N P+VG +LQDHL+ + ++ + D + G HGM ++ S +I + E S +VLG I S+++S + L +++F++ I W+ + S A + + +SRG VRL S DP PP+IDP YLS D + W + KT + + +L E+ PG G F + K SS+FHPVGTCRM G E SV D+ LRVHG LR+AD SVAPRIPSAPTQAMA MIG +AA L+LG K
Sbjct: 34 CDYLVVGGGCSSCSLVACLAAAGKSVVVVEAGGAEPWER-KVVDDPQSWFAAASHGRPVSRLYRTVPQLAVLSKLMPAFRGEGFGGTGNVNACIWCRGRREDYQ-QWPWKLEDIEKGFEFAERSLRVKRVPAKGSGAAMC-AMMRESGFKTCK---EEL-------------WAEDGVAEGLYATVQGEAGTRTSAWKELVSPWIAKGRVKVYPHCNVSRVIFDRKK-------------------------------VVLCAGAFDSPKILLLSGIGDPEELEEKTVPPLINNPNVGRHLQDHLILVAAFAARKPLRSCDTNDIGTHGMCHVTIRRESRRRHGQILFKDSWNAWEVLPELCSGMVLG------QNIGSEVISRVVLIVC----------KLVFYIPGI-------KWMLRQSLTAGICMMDPRSRGRVRLRSNDPRDPPLIDPRYLSEESDLVLLHDLWSTFKSVKTSPSAKEWILA-ELLPGAPLMYGESMSWFKWWVKLACSSYFHPVGTCRMPSGKEWETRQSNELSSVSVVDAFLRVHGTVGLRIADCSVAPRIPSAPTQAMAYMIGYQAAQLMLGTRTPK 555
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: A0A836CG94_9STRA (GMC_OxRdtase_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG94_9STRA) HSP 1 Score: 235 bits (600), Expect = 5.640e-65 Identity = 212/669 (31.69%), Postives = 291/669 (43.50%), Query Frame = 1
Query: 46 AEPIEVDTVDCDFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPVATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWPWKLEDIEASFESIESELTLEEPRSSGTVELSWERMLEEIGCKRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERG----------------------------------RAVGIELL-------EYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDG--LHGMAYIRCP-----LRSDSGDS--------------------EISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMR----LTP-LSWIAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETA--------TGKAVLGYEISPGKRFNNGC-DDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVL 1806
A IE +DC++L+VG+G++GC SRLVR+G KV+L+ G DA + ++ P+ ++ PL D + PQ L RR G GGGGS+ INA +Y RGR DY WPW L+ +E F ++E+ L + T G AS + L + + W ++G+ A+ + G R SAW AF+AP+ NL I TRV+++ G RAVG+E + R GR R+R LRLSN AAE++LC G TP+LLMLSG+GP+ HLE + V V+ P VGA LQDH + ++P + A G GM R L D GDS + + + A+G S ++ L S A L + MR L P L A + + L T +SRG VRL S DP PV DP YLS +D A+ A R +R + G EI PG + + D + + + +H +C MG + + A+ LRV G LRVADAS AP +PSA TQAMAMM+GDRAAAL+L
Sbjct: 8 APDIEDIVLDCEYLVVGSGAAGCAFVSRLVRQGAKVVLLTDGSIDAFR-DPGIQAPASFLSNLQRGWPLCDPHFSAPQPQLAGRRSLTFVGRGGGGSTLINACIYIRGRRSDYA-AWPWSLDFVEEGFAAVEAVLQPALIPAGVT------------GKALASAMSAGLDLAPAPQREDAVGWVRDGVR--ADMHFSIHAGRRVSAWQAFMAPLVGRSNLTILDRHIATRVLLDGGGGXXXXXXXXXXXXDXXXXXXXXXXXXXXXGSAPRAVGVEAVVADDAAATRAAALRSGR-RVR-LRLSNPAAEVILCCGALYTPQLLMLSGIGPRAHLETHDINVEVDAPGVGAGLQDHPMVPVARELTRALAPHELAPGGHIFEGMVDFRVAPATGELVKDIGDSGGDGSXXXXXXXXXXXXXXXXXXXXXXXESSGDGNPPICFQLTLANGRGAASAQAFLVPLVGPNSRAGAGRAAAARVALERLKMRAVLALVPSLRDAAMPVASMYLTLETPRSRGAVRLRSADPADLPVFDPRYLSAEEDRAALRGALRAVRATAXXXXXXXXXXXXAADDIFGAEILPGPAYGDAAASDADLDRYIVEWSVTQWHAAASCAMG-----AALDAE-LRVRGARALRVADASAAPALPSANTQAMAMMVGDRAAALLL 652
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: UPI000FDACC2A (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=unclassified Mesorhizobium TaxID=325217 RepID=UPI000FDACC2A) HSP 1 Score: 232 bits (591), Expect = 5.700e-65 Identity = 193/597 (32.33%), Postives = 287/597 (48.07%), Query Frame = 1
Query: 67 TVDCDFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPV-ATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWP------WKLEDIEASFESIE--SELTLEEPRSSGTVELSWERMLEEIGC---KRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGL----HGMAYIRCPLRSDSGDSEISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLG 1809
T D+++ GAGS+GC LA+RLV G +VLLVE GP D + + P+ + V T+RS + + + P+ ++ R + +G GG S+INA LY RG+ EDY D W W +D+ + +E L E ++G + +S R + K A G + + D +G E G +TT +GERQSA F+ P+A NL + +D+ VT + +E G A G+ T G+S + AE++L +G TPKL+MLSG+GP E+L G+PV+ +MP VG +LQDH+ L++ +S + GL HG+ Y+ R+ S + ++SG GF DG P +V F ++ +++ I +H N + KSRGT+ L S DP P +LSHPDD + A +I R + A + V+ E +PGK + D++ + A + +HP GTCRMG +D V LRV GV RLR+ DAS+ PR+ S T A A+MIGDR A +LG
Sbjct: 2 TKSYDYIIAGAGSAGCTLANRLVTAGKRVLLVEAGPADNSRF---IDMPATFAKVIGTTRSWI---YQSDPEPSVGGRTLPIPQGRTLGGGSSINAMLYIRGQPEDY-DGWRDLGCPGWGWDDVLPVYRRLERNERLAGERHGNTGPLPVSDARHRHPLSLAYVKAAQQAGYKYNDDFNG----------EKQAGVGFYQTTTANGERQSAAKVFLKPLAGNANLTVVTDALVTGLTLENGAANGLSY-----TTPDGQSHS-----AKAGAEVILAAGALATPKLMMLSGLGPAEYLTQMGIPVIRDMPSVGRDLQDHVAAPLYALTRKPISLLG-QDRGLKALRHGIEYVL--FRNGLLTSNV-VESG-------------GFFDTDGDGRP----------------------DVQFHVLPVMIEGAEHGSIERHGMEINPCVLRPKSRGTILLRSRDPRDPIRFTTGFLSHPDDLATLLAGMKIARTVLRQPAL-QEVVAEEFAPGKA--DDLPDQTIVDHIMRHAKTVYHPSGTCRMGS--DDHAVVDPQLRVRGVPRLRICDASIMPRLISGNTNAAAIMIGDRCANFILG 527
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: UPI001BAA61C3 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAA61C3) HSP 1 Score: 228 bits (582), Expect = 1.180e-63 Identity = 184/591 (31.13%), Postives = 282/591 (47.72%), Query Frame = 1
Query: 79 DFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPV-ATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYK-------DHWPWKLEDIEASFESIESELTLEEPRSSG-----TVELSWERMLEEIGCKRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGLHGMAYIRCPLRSDSGDSEISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLGD 1812
D+++ GAGSSGCV+A+RLV G +VLL+E GP D + P+ ++ V T RS + ++ PQA NR M+ +G GG S++NA +Y RG+ DY D W W+ D+ F E+ L + +++++ A G ++ D +G G +TT R G R S ++ PV PNL++ +++ V+RV++E G A GI + T G ++ E++L +G TPK+L+LSG+GP++ L G+PV+ ++ VG N QDHL E ++G A R P+ S + DSG A + G + S +V A T LG ++ F ++ +L + H + N KSRGTVRL + DP+ P + DP YL+ +D A+ ++ R+ A KA++ E+ PG+ + DDK+ + A + +HP GTCRMG+ +D V +L+V GVSRLRVAD SV P+I S T A A+MIG+R A VL +
Sbjct: 6 DYVVAGAGSSGCVIANRLVEAGKRVLLLESGPADNDMF---IHIPATFVRVIGTERSWVYES---EPQAKAANRAMYVPQGRTLGGGSSLNAMVYIRGQARDYDEWAEMGCDGWAWR--DVLPVFRRSEANTRLVDGYHGNDGPLSVTDIAYKHPFSRGFVAAAQQVGLPLNPDFNGEQQL----------GAGFYQTTTRRGRRGSTAVMYLRPVMRRPNLKLITEAHVSRVVLENGAASGIA----YRTADGAE------HVARARHEVILTAGALATPKILLLSGIGPQQELAALGIPVIRDLQGVGRNYQDHL------------------EVSVYGRA--RKPI------SLLGNDSGLKALRHGAQ-----YYLFKSGLLTSNVVESGGFADT----LGTGRPDIQFHVLPVLAGDVGREPLEGHGMSINPCFLRPKSRGTVRLRAADPSAPILFDPNYLAEQEDVDALVRGVKLARKILRAPAL-KALIEKELLPGEA--DDLDDKAIEAHVRSYAKTVYHPAGTCRMGK--DDGAVVDPTLKVRGVSRLRVADVSVMPKIVSGNTNAPAVMIGERCADFVLAE 528
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: UPI0013EAEDA1 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Rhizorhabdus phycosphaerae TaxID=2711156 RepID=UPI0013EAEDA1) HSP 1 Score: 227 bits (579), Expect = 3.260e-63 Identity = 195/591 (32.99%), Postives = 273/591 (46.19%), Query Frame = 1
Query: 79 DFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPVATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWP------WKLEDIEASFESIESELTLEEPRSSGTVELSWERMLEEIGCKRASLT-----GEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGLHGM-AYIRCPLRSDSGDSEISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSW--IAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLG 1809
DF+++GAGS+GCVLA+RL G VLLVE GP D L + P + + + + TVPQ ++ R M +RG GGSS+ N LYCRG DY D W W DI F E + L +R RA + G S D +G D ++G G +T G+R SA A++ P A PNL I + + TR++++ RAVG+EL +G RLR++ AE++L +G ++P LLMLSG+G +HL GV LV++P VG+NL DH + H S T + +H A++R +R D E SI++ G M G +P + + L P+S I H + LT +SRGT+RLAS DP P+IDP YL+ P D A R R E A + + P + DD + F + T ++ H GTC MG+GP DSVV A LRVHGV LRV DAS+ P++ S T A +MI ++A+ ++LG
Sbjct: 6 DFIIIGAGSAGCVLANRLSADGASVLLVEAGPADRSAL---IHIPGLFSTLYR-QGRFAWEYRTVPQRHVDGRVMRDVRGKVLGGSSSTNGMLYCRGAAADY-DGWAAMGNAGWSYADILPYFRRAEDHADGADAFHGVGGPLKVQRSPMNHPLARAFVAAAVEAGHPYSADINGAD-------RQGFGPADSTIA---GGKRWSAAQAYLRPAMARPNLEILTGAQATRILLDGSRAVGVELAH-----KG--DRLRRM-----GAEVILAAGALQSPHLLMLSGIGAADHLRQNGVSPLVDLPGVGSNLHDHA-SVTAHASCTYSGTLAKLLNPVHAAGAFLRYMVRKDGVMGECSIEAS-------------GTMRTPGAAVPDIKCQFVPIP------------------------LDPVSGLPIRSHGMINRMELTVPESRGTLRLASSDPFVAPLIDPNYLAEPADR----AKLRFAIREAIEIFRQPAFAPFGVEPLLPVADMDDDDALDAFVRATLTNDHHAAGTCAMGKGP-DSVVDA-RLRVHGVEGLRVVDASIMPKVVSGNTNAPVIMIAEKASDMILG 525
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: UPI000412F607 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Mesorhizobium erdmanii TaxID=1777866 RepID=UPI000412F607) HSP 1 Score: 227 bits (578), Expect = 4.540e-63 Identity = 196/609 (32.18%), Postives = 291/609 (47.78%), Query Frame = 1
Query: 79 DFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPV-ATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWP------WKLEDIEASFESIESE-------------LTLEEPRSSGTVELSWERMLEEIGCK-RASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAED-GL----HGMAYI---RCPLRSDSGDSEISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHT---ASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLG 1809
D+++ GAGS+GC +ASRLV +VL++E GP D + + P+ + V T+RS + + + P+ ++ R + +G GG S+INA LY RG+ EDY D W W +D+ + +E L + +PR + L++ R ++ G + GE+ +EG+G +TT +GERQSA F+ P+AA NL+I +D+ VT V +E G A G+ + T G Q+ + E++L +G TPKL+MLSG+GP HL + G+PV+ +MP VG NLQDH+ L++ +S ED GL HG+ Y+ R L S+ ++SG GF DG P +V F ++ +++ I +H N + KSRG+VRL S P+ P +LSH DD + A ++ R + A + V+ E++PGK DD S H A + +HP GTCRMG P+ V LRV GV RLR+ADAS+ PR+ S T A A+MIGDR A +LG
Sbjct: 6 DYIVAGAGSAGCTVASRLVAASKRVLVIEAGPADNTRF---IDMPATFAKVIGTARSWI---YQSEPEPSVGGRSLPIPQGRTLGGGSSINAMLYIRGQPEDY-DGWRELGCPGWGWDDVLPIYRRLERNERLAGGWHGNAGPLPVSDPRYRHPLSLAYVRAAQQAGYRYNDDFNGEQ----------------QEGVG---FYQTTTANGERQSAAKVFLKPLAADVNLKIVTDALVTGVTLENGAATGLS----YTTPDG------QIHSVSAKEEVILTAGALATPKLMMLSGLGPAAHLAEMGIPVIRDMPAVGQNLQDHVAAPLYALTRKAVSL--LGEDRGLKALRHGIEYLLFRRGLLTSNV------VESG-------------GFFDTDGDGRP----------------------DVQFHVLPVMIESAEHGSIKRHGMELNPCVLRPKSRGSVRLRSRKPSDPIRFTTGFLSHADDLVLLLAGMKVARTILRQPAL-REVIAEELAPGK-----ADDLSEEAIADHIISHAKTVYHPCGTCRMGTDPQ--AVVDPQLRVRGVPRLRIADASIMPRLISGNTNAPAIMIGDRCANFILG 527
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: UPI001E3D1482 (choline dehydrogenase n=1 Tax=Aestuariibacter halophilus TaxID=226011 RepID=UPI001E3D1482) HSP 1 Score: 226 bits (577), Expect = 7.230e-63 Identity = 193/594 (32.49%), Postives = 272/594 (45.79%), Query Frame = 1
Query: 79 DFLLVGAGSSGCVLASRLVRRG-LKVLLVEKGPTDAGKLGKLVRRPSEWMPVATSRSPLVDN----FVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWP------WKLEDIEASFESIESELTLEEPRSSGTVELSWERM-----LEEIGCKRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGLHGMAYIRCPLRSDSGDSEISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLGD 1812
D+++VGAGSSG LA+RL ++V L+E G D R P +P S P V + + T PQ L R + RG GGSS+INA Y RG ++DY D W W D+ F+ E + E G LS E + L + + A GE+ D +G D +EG+G + T+ +G+R SA A++ PV + NL + +D+ V +V+I G A G+ + E R+L + E++LC G +P+LLMLSG+GP EHL+ G+ +V++P VG NLQDH L + RC + ++ GA A+ ++F G S I T+ GA+A FL IL+ S + +V KSRG +RL S DP+ P IDP YLSHPDD++ + R R A + G+EI PG D L F + A + +HPVGTCRMGQ + V LRV GVS LRV DASV P + T A +MI ++AA ++ D
Sbjct: 10 DYIVVGAGSSGATLAARLSEDPKVQVCLIEAGGRD--------RHPFIHIPFGLSLLPRVGHVNWDYTTAPQQELDGRELWWPRGKTLGGSSSINAMCYIRGAQQDY-DQWASLGATGWGWNDVLPYFKKSERQQHGENEWHGGNGPLSVEDLRHQNELSTVFLEAAQQAGEKAVEDFNGPD-------REGVG---FYQVTQHNGQRCSAAKAYLKPVLSRSNLTVMTDTLVEKVLITDGVATGVRVTE--------NGVFREL---SAFKEVLLCGGAINSPQLLMLSGIGPAEHLKAHGIEPVVDLPGVGQNLQDH----------------------LDAIVQYRCKAKKG-----YAVALGALPMYIKAA---FDYLFKRSGPFSSNIAEAGGFVKTRHA--GALADIQYHFLPAILLN-HGRSTAFGYGYGVHVCCLYPKSRGEIRLQSADPSVPAYIDPRYLSHPDDQKVMVDGVRKAREILRSPAF-EPYQGWEIGPGPDAET---DDDILAFVRKRAETIYHPVGTCRMGQVSDPETVVDPQLRVKGVSGLRVVDASVMPTLIGGNTNAPCIMIAEKAADMIRSD 536
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: A0A646KGY9_STRJU (Choline dehydrogenase n=1 Tax=Streptomyces jumonjinensis TaxID=1945 RepID=A0A646KGY9_STRJU) HSP 1 Score: 225 bits (573), Expect = 1.400e-62 Identity = 197/590 (33.39%), Postives = 279/590 (47.29%), Query Frame = 1
Query: 79 DFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPVATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDHWP------WKLEDIEASFESIESELTLEEPRS----SGTVELSWERMLEEIGCKRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGLHGMAYIRCPLRSDSGDSEISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIA-KHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGY--EISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSAD-SLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVL 1806
D+++VGAGS+G V+A RL+ +G V ++E GP D L V P W A RSP TVPQ + +RR++ RG GGSS++N +Y RG DY D W W E + F + SE L+ P + G + +S R+ + A + +SL TDD + E + G T RDG R SAW +F+APVA P +R+ + + RV++ERGRAVG+E GG + + A+E++L +GV + +LL+LSG+GP HL GV V V +P VG NL DHLL S+++ + + P G A + + SQ+ A T S G + V LV+ S+ A +H L SRGT+RLAS DP ++DP L+ P D +++ A + R +G Y E +PG R D ++++ + ++ H VGTCRMGQ DS+ D LRVHGV LRVADASV P +PS T A +MIG++AA LVL
Sbjct: 10 DYVIVGAGSAGSVIARRLIDQGFSVHILEAGPADDDPL---VHSPQGWP--ALLRSPPDWALTTVPQRHADDRRLYWPRGRVLGGSSSLNGMIYIRGHRSDY-DSWAYGGCPGWDWESVLPYF--LRSEDHLDGPSAWHGQGGPLPVS--RITDRHPAAEAFVAA-ALSLGHPPTDD----FNGERMTGVGFNHVTVRDGRRMSAWRSFMAPVAGRPLVRVSTGARAHRVLLERGRAVGVEYA------LGGMTHR-----AYAASEVILSAGVVGSAQLLLLSGIGPAAHLRRTGVEVTVELPGVGENLHDHLLVSNVYEASRPLPP---------GRANV----------------------------------------LESQL-----FAATDSRRPGPDLQPVFLHLVY-----PAESYPAPEHGYTIAPGLVRPLSRGTLRLASADPEAAVLLDPGVLAEPHDLESLVDAVELSREIGN---SGHFADWYRAEAAPGPRARTRNDLRAYV---RRAVGTYHHQVGTCRMGQ---DSLSVVDPELRVHGVPGLRVADASVMPSVPSGNTNAPTIMIGEKAADLVL 505
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Match: F7Y851_MESOW (Glucose-methanol-choline oxidoreductase n=27 Tax=Phyllobacteriaceae TaxID=69277 RepID=F7Y851_MESOW) HSP 1 Score: 225 bits (574), Expect = 1.590e-62 Identity = 190/600 (31.67%), Postives = 283/600 (47.17%), Query Frame = 1
Query: 79 DFLLVGAGSSGCVLASRLVRRGLKVLLVEKGPTDAGKLGKLVRRPSEWMPV-ATSRSPLVDNFVTVPQANLFNRRMHAMRGCGGGGSSNINAGLYCRGREEDYKDH-------WPW-----------KLEDIEASFESIESELTLEEPRSSGTVELSWERMLEEIGCKRASLTGEEISLDSHGTDDKRITWTKEGLGGCANTRTTRRDGERQSAWAAFIAPVAAMPNLRIKSDSAVTRVIIERGRAVGIELLEYFPTWRGGRSRLRQLRLSNEAAEIVLCSGVFRTPKLLMLSGVGPKEHLEDKGVPVLVNMPHVGANLQDHLLGSSIHLSKTQMSPADFAEDGL----HGMAYIRCPLRSDSGDSEISIDSGASKTNEDASSLVLGFMFADGGTIPSQIVSMMRLATTQSGFLGAMAREVIFFLVWILMRLTPLSWIAKHSRAANVALTTVKSRGTVRLASGDPTCPPVIDPAYLSHPDDEQAIAAAWRILRRAKTETATGKAVLGYEISPGKRFNNGCDDKSFLTFFKHTASSFFHPVGTCRMGQGPEDSVVSADSLRVHGVSRLRVADASVAPRIPSAPTQAMAMMIGDRAAALVLG 1809
D+++ GAGS+GC LA+RLV G +VL+VE GP D +L + P+ + V T+RS + ++ P+ ++ RR+ +G GG S+INA LY RG+ +DY W W + E + IE L + +PR + L++ + ++ G + + D +G +EG+G +TT +GERQS F+ P+A NL + +D+ VT V +E G A G+ T GR+ R AE++L +G TPKL+MLSG+GP EHL G+PV+ +MP VG +LQDH+ L++ +S + GL HG+ Y+ RS S + ++SG GF DG P +V F ++ +++ I +H N + KSRGTV L S D P +LS P D + A +I R + A +AV+ E+SPG + D++ A + +HP GTCRMG +D V LRV GV RLR+ DAS+ PR+ S T A +MI DR A +LG
Sbjct: 6 DYIIAGAGSAGCTLANRLVNAGKRVLIVEAGPADNTRL---IDMPATFAKVIGTARSWIYES---EPEPSVGGRRLPVPQGRTLGGGSSINAMLYIRGQPQDYDGWRDLGCTGWGWDEVLPVFRRLERNERLAGEHHGIEGPLPVSDPRHRHPLSLAYVQAAQQAGYR--------YNDDFNGAQ-------QEGVG---FYQTTTTNGERQSVAKVFLRPLAGNANLTVVTDALVTGVTLENGAASGLAY-----TTSDGRNHTATAR-----AEVILTAGALATPKLMMLSGLGPAEHLAGLGIPVIRDMPSVGRDLQDHVAAPVYALTRRPISLLG-QDRGLKALRHGIQYLL--FRSGLLTSNV-VESG-------------GFFDTDGDGRP----------------------DVQFHVLPVMIESAEHGSIERHGMELNPCVLRPKSRGTVGLRSRDAADPIRFTTGFLSDPHDLALLLAGMKIARNILRQPAL-QAVVAGELSPGD--DADLSDQAITDHILEHAKTVYHPCGTCRMGT--DDGAVVDPQLRVRGVPRLRICDASIMPRLISGNTNAPVIMIADRCADFILG 527 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1490.3369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1490.3369.1 >prot_F-serratus_M_contig1490.3369.1 ID=prot_F-serratus_M_contig1490.3369.1|Name=mRNA_F-serratus_M_contig1490.3369.1|organism=Fucus serratus male|type=polypeptide|length=630bp NYPIGGRTTGLHPDMAEPIEVDTVDCDFLLVGAGSSGCVLASRLVRRGLKback to top mRNA from alignment at F-serratus_M_contig1490:14267..25354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1490.3369.1 ID=mRNA_F-serratus_M_contig1490.3369.1|Name=mRNA_F-serratus_M_contig1490.3369.1|organism=Fucus serratus male|type=mRNA|length=11088bp|location=Sequence derived from alignment at F-serratus_M_contig1490:14267..25354+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1490:14267..25354+ >mRNA_F-serratus_M_contig1490.3369.1 ID=mRNA_F-serratus_M_contig1490.3369.1|Name=mRNA_F-serratus_M_contig1490.3369.1|organism=Fucus serratus male|type=CDS|length=3780bp|location=Sequence derived from alignment at F-serratus_M_contig1490:14267..25354+ (Fucus serratus male)back to top |