mRNA_F-serratus_M_contig1488.3344.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: D7FHT1_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHT1_ECTSI) HSP 1 Score: 386 bits (991), Expect = 3.970e-128 Identity = 192/306 (62.75%), Postives = 235/306 (76.80%), Query Frame = 1
Query: 22 MSFLSYAIAIGLVGVGLLAMARHRHQQTADARPKEFIRFRSYGDESKPPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAEEYSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAREVADFIISSS 939
M LSY + I +GVGL A+A+ H++ R ++FI F+ YGD++K PL+IVPGLDGVTAFFSD++PEL LNFHVV+FNLPL +PPLS A E E Y ++IAR+LA VM E AG+K ASI+GESFGGMVAQRLALDFP+KV LVLLSSLAK EL +VKFK +VLPV+E+IG PFVAQSLF+VAH+P+VVE EP W KHL +KEASW DHWSV+AR KIA FDTT ELE IK ALV++GE+D FT G +QL+DGI+G+R GLPGGHLCHI+ PKAF+ V D+++ SS
Sbjct: 1 MGLLSYLMTISAIGVGLFALAKRNHERAGAPRQEQFIPFKKYGDDTKQPLVIVPGLDGVTAFFSDIVPELALNFHVVMFNLPLASPPLSRAAVEGERYDMSYIARRLAGVM-------EDAGIKGGASIVGESFGGMVAQRLALDFPDKVKGLVLLSSLAKLELPPSVKFKADFVLPVVESIGYLLPFVAQSLFSVAHMPDVVEKDEPLWAKHLVLKEASWVDHWSVMARTKIALDFDTTHELENIKTGALVLFGENDTFTATGAQQLIDGIEGSRKVGLPGGHLCHITSPKAFSEAVTDYLLVSS 299
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: A0A7S2XZC0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC0_9STRA) HSP 1 Score: 265 bits (678), Expect = 2.520e-81 Identity = 131/268 (48.88%), Postives = 182/268 (67.91%), Query Frame = 1
Query: 127 FIRFRSYGDESKPPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAEEYSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAREVADFII 930
F RF+ +GD S PP++++PGLDG T+FF+DV+PELT FHVVVFNLPL P + E YSF ++A +L +VM+E P EA ++GESFGG++AQRLA+D+P +V +LV+LSSLAK E+ V FK Y+LPV+E +GL FP +AQ+LFA H+ +V+E HEP WVK F KEASWA H+SV+AR K+ + E+ + L++YG+DD FT G++ L I+ + +PGGHL H++ PK FA V +FI+
Sbjct: 28 FERFKQFGDPSNPPVVLIPGLDGCTSFFADVIPELTPKFHVVVFNLPLADEPFRKNPNRTEPYSFQYMAGELVSVMEELGLP--------EAYVVGESFGGVIAQRLAIDYPRRVKKLVVLSSLAKTEMPPEVAFKAKYLLPVVETLGLAFPGLAQTLFAYLHVDDVIEPHEPEWVKQFFKKEASWAHHYSVMARLKLVIPLNMAVEVGYLPHKVLIIYGQDDHFTRKGSEHLHQIIQASEIVAMPGGHLPHVTSPKLFAELVENFIV 287
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: A0A7S3UUZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUZ2_HETAK) HSP 1 Score: 254 bits (648), Expect = 1.250e-76 Identity = 135/290 (46.55%), Postives = 181/290 (62.41%), Query Frame = 1
Query: 58 VGVGLLAMARHRHQQTADARPKEFIRFRSYGDESKPPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAEEYSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAREVADFI 927
V V LL++ H + + F ++ YG+ PPLII+PGLDG T+FFSDV+PE T ++VVVFNLPL P + YSF FIA +L VMD H ++GESFGG+VAQ+ +D P+ VDRLV+LSSLAK ++ + FK +Y+LP + +GL FP AQ+LFA H+ +V+E HEP WVK F KEASWA H+SV+AR I D E++ IK P L++YG+DD FT + L I +R GLPGGHL H+++PK+FA EV F+
Sbjct: 10 VAVPLLSILLHLLE-----KEPHFEAYKQYGNPENPPLIIIPGLDGCTSFFSDVIPEFTPMYNVVVFNLPLAPSPFQRTRKDTPAYSFKFIASELKKVMDTLSIDKAH--------VIGESFGGVVAQQFTIDHPDAVDRLVVLSSLAKTDMPPIIAFKANYLLPAVRGLGLLFPGAAQTLFAHLHVGDVIEPHEPKWVKDFFKKEASWAHHYSVMARLAIVIPLDILEEVKAIKHPTLLLYGKDDHFTGKDSLILNKAIPNSRMVGLPGGHLPHLTNPKSFAAEVQAFL 286
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: A0A7S3ZKI3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKI3_9STRA) HSP 1 Score: 222 bits (566), Expect = 5.360e-64 Identity = 127/277 (45.85%), Postives = 171/277 (61.73%), Query Frame = 1
Query: 133 RFRSYGDESKPPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAEEYSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFT---TAGTKQLLD--GIKGARAKG------LPGGHLCHISHPKAFAREVADFII 930
R+++YGD +KPPL+++PGLDG T FF V+PEL +F VVV++LPL + Y+F+++A +AA +DE ASI+GESFGG+VAQ +AL+ E+V+ LVLLSSLAK EL + VKFK H +LP++E +G FP +AQ++FA H +VVE+ EP W + LFVKEASWA H SV+ R KI A D + +I P L++ G DD FT TA + LL G G G LPGGHL H++ FAR V D +
Sbjct: 34 RYQTYGDRAKPPLVVIPGLDGCTVFFQGVVPELVRDFFVVVYDLPLY--------DGGQNYTFSYLANDVAAALDELAIE--------RASIIGESFGGVVAQHVALEHSERVEALVLLSSLAKTELTAVVKFKLHCLLPLVEFLGRAFPGIAQTIFAKVHASDVVEASEPAWARSLFVKEASWAHHASVMQRIKIVAALDIEDRVPRIAAPVLLVRGADDSFTGHTTARLRALLQSRGQVGTFPGGAVDVVTLPGGHLPHVTSSDLFARAVRDALF 294
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: F0YAM6_AURAN (AB hydrolase-1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAM6_AURAN) HSP 1 Score: 218 bits (556), Expect = 2.670e-63 Identity = 121/265 (45.66%), Postives = 168/265 (63.40%), Query Frame = 1
Query: 133 RFRSYGDESKPPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAEEYSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAREVADFI 927
R+R+YG+ + PP++++PGLDG +F++ LPELT VVV+ LPL++ A+ + Y+F+++AR LA +DE + A A ++GESFGG+VA AL+ +V RL+LLSSLAK EL + V K + LPV+ IG FP VAQ++FA H +VVE+ EP WV + F+KEASWA H SV+AR I D TA + ++ ++YG DD FT A T LL + A LPGGHL H++ PKAFAR V DF+
Sbjct: 32 RYRTYGNPALPPVVLIPGLDGCASFYAGALPELTRERFVVVYELPLVS------AANRDAYTFSYLARGLADALDEL-------DIDA-APVVGESFGGVVAMHAALEHETRVTRLLLLSSLAKTELTTEVWLKKTFALPVVRVIGRAFPNVAQTIFAYVHASDVVEASEPEWVTNFFIKEASWAHHASVMARLSIVIPLDITARVVHLRQKTRLVYGADDTFTGATTDALLALLPDADKVALPGGHLPHLTSPKAFARLVLDFV 282
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: D7G1R2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R2_ECTSI) HSP 1 Score: 171 bits (432), Expect = 7.190e-47 Identity = 89/160 (55.62%), Postives = 106/160 (66.25%), Query Frame = 1
Query: 430 MVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAR 909
MVAQRLALDFP KVDR+VLLSSLAKP+L V+FK VE HEP W K +F+KEAS+A HWSV+AR KIA +FDTT EL+ IK ALV+YGEDD FT G +QLLDGI+G++ GLPGGHLCHI+ PK F++
Sbjct: 1 MVAQRLALDFPAKVDRMVLLSSLAKPDLTPVVRFK-------------------------------VEKHEPRWAKRVFLKEASFAHHWSVMARTKIALSFDTTDELKDIKTGALVLYGEDDTFTATGAQQLLDGIEGSKTLGLPGGHLCHITSPKTFSK 129
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: A0A7S2B727_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B727_9STRA) HSP 1 Score: 162 bits (409), Expect = 5.320e-43 Identity = 81/177 (45.76%), Postives = 113/177 (63.84%), Query Frame = 1
Query: 406 ILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAREVADFIISS 936
++GESFGG+VAQ +AL P +V + ++SSL EL V+ K +LP++EA+G FFP VAQ LFA H+ +VVES EPTWVK FVKEASW H+SV+ R ++ D ++I+ L++YG +D FT GT +L + ++ LPGGHL H++ PK FA V F+ S
Sbjct: 21 LVGESFGGVVAQHVALASPGRVKTMTIMSSLCHTELTVKVQLKAKILLPIVEALGFFFPGVAQFLFAALHVDDVVESFEPTWVKDFFVKEASWVHHYSVMKRIRLVIGLDMCERSKQIQQKTLLVYGREDNFTLPGTMELHRNLPNSQLFDLPGGHLPHLTEPKEFAAAVDAFVSQS 197
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: UPI00036C222B (alpha/beta hydrolase n=1 Tax=Ancylobacter sp. FA202 TaxID=1111106 RepID=UPI00036C222B) HSP 1 Score: 97.4 bits (241), Expect = 5.740e-19 Identity = 85/260 (32.69%), Postives = 122/260 (46.92%), Query Frame = 1
Query: 163 PPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAEE--YSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAV-AHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDD-IFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAREVADFII 930
P ++++PGL G F+ V L F + LI AG S+ E Y+ IAR + +MDEA A A ++G S GG V Q LALD PE+ DRLV+ S P D+ F L +LEA P + Q+ V + + + +HEP + S A +AR ++ AFD AEL +I+ P LV+ DD + A +++L GI GA GGH + FA+ V DF++
Sbjct: 22 PDVVLIPGLGGDGRFWEPVAEPLEARFRL------LIVDHRGAGRSDRPEGPYTIERIARDVVEIMDEAG--------WARAHLVGHSTGGAVVQTLALDSPERADRLVISGSWPGP--DARFHALFEARLALLEAGR---PDIYQAFTHVLGYDADWIAAHEPELNAAVGRAAQSLAPLSVAMARIRMLLAFDRAAELGRIRAPTLVLGARDDEMILFAQSERLARGIPGATLVAFDGGHFYPRTRADLFAQHVTDFLV 262
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: A0A327KBB1_9HYPH (AB hydrolase-1 domain-containing protein n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327KBB1_9HYPH) HSP 1 Score: 95.9 bits (237), Expect = 1.870e-18 Identity = 82/278 (29.50%), Postives = 131/278 (47.12%), Query Frame = 1
Query: 112 ARPKEFIRFRSYGDESKPPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAE----EYSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAVAHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDDIFTTAG-TKQLLDGIKGARAKGLP-GGHLCHISHPKAFAREVADFI 927
ARP + + G+ PPL +V GL GV A++++++P L+ +F V++ + + GAS A +S +A LAA++D H G ++G S G V Q +ALD+PE++ RLVL + A P+ + F+ + + + L+ P + H K + +A+ ++ AR + AFD A L I+ P LV+ EDDI T +++L GI AR LP GGH C + P+ F V F+
Sbjct: 5 ARPDGDLAYEVVGEG--PPLALVTGLGGVAAYWTNLVPVLSRSFSVILHD------QIPTGASRARARRTSHSVEALAADLAALLD-------HLGCD-RCHLIGHSTGAAVGQVMALDYPERLGRLVLYAGWAGPDPHFSYCFEIRRRALIERGVPAYNEMGPLFLYP----PRWIARHRDRVAKIIADADAAPPPVEAIAARIDMIVAFDRRARLGAIRAPTLVVCAEDDILTPPHLSEELAAGIPDARLARLPWGGHACSQTAPEDFLAAVLPFL 262
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Match: A0A839Z3B4_9HYPH (Aminoacrylate hydrolase n=1 Tax=Angulomicrobium tetraedrale TaxID=217068 RepID=A0A839Z3B4_9HYPH) HSP 1 Score: 87.0 bits (214), Expect = 2.000e-15 Identity = 79/260 (30.38%), Postives = 120/260 (46.15%), Query Frame = 1
Query: 163 PPLIIVPGLDGVTAFFSDVLPELTLNFHVVVFNLPLIAPPLSAGASEAEE--YSFAFIARQLAAVMDEARNPPEHAGVKAEASILGESFGGMVAQRLALDFPEKVDRLVLLSSLAKPELDSAVKFKFHYVLPVLEAIGLFFPFVAQSLFAV-AHLPEVVESHEPTWVKHLFVKEASWADHWSVVARCKIAYAFDTTAELEKIKVPALVMYGEDD-IFTTAGTKQLLDGIKGARAKGLPGGHLCHISHPKAFAREVADFII 930
P ++++PGL G F+ V L F + LI AG S+ E Y+ IAR + +MDE R A A ++G S GG V Q LA+D PE+ DRLV+ S P D+ + F L +LEA P + Q+L V + E + +H + + A +AR ++ AFD AEL I+ P L++ DD + A ++++ I GA GGH + FA++V F++
Sbjct: 22 PAVVLIPGLGGDGHFWDPVAERLEARFRL------LIVDHRGAGRSDRPEGPYTIGRIARDVLEIMDEERC--------ARAHLVGHSTGGAVVQTLAIDSPERADRLVISGSWPGP--DARFRTLFEARLALLEAGR---PDIYQALTHVLGYDAEWIAAHGAELDAAVRRAGQTLAPLSVAIARIRMLLAFDRVAELGGIRAPTLILGARDDEMILFAQSERIARFIPGAMLAAFDGGHFYPRTRADLFAQQVVGFLV 262 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1488.3344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1488.3344.1 >prot_F-serratus_M_contig1488.3344.1 ID=prot_F-serratus_M_contig1488.3344.1|Name=mRNA_F-serratus_M_contig1488.3344.1|organism=Fucus serratus male|type=polypeptide|length=307bp MSFLSYAIAIGLVGVGLLAMARHRHQQTADARPKEFIRFRSYGDESKPPLback to top mRNA from alignment at F-serratus_M_contig1488:140265..147444- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1488.3344.1 ID=mRNA_F-serratus_M_contig1488.3344.1|Name=mRNA_F-serratus_M_contig1488.3344.1|organism=Fucus serratus male|type=mRNA|length=7180bp|location=Sequence derived from alignment at F-serratus_M_contig1488:140265..147444- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1488:140265..147444- >mRNA_F-serratus_M_contig1488.3344.1 ID=mRNA_F-serratus_M_contig1488.3344.1|Name=mRNA_F-serratus_M_contig1488.3344.1|organism=Fucus serratus male|type=CDS|length=1842bp|location=Sequence derived from alignment at F-serratus_M_contig1488:140265..147444- (Fucus serratus male)back to top |