mRNA_F-serratus_M_contig1488.3342.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: D7FHT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT3_ECTSI) HSP 1 Score: 268 bits (686), Expect = 1.000e-76 Identity = 136/229 (59.39%), Postives = 189/229 (82.53%), Query Frame = 1
Query: 265 AEGYEE-QNFESAIAASRQQAELRSVQELQMELDAIRLKLLRRSQIIDAIRKAYIQDVVVLKNELMRKSAMTEEEYYDQGGPGTNVADAVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLEIVIRETKRMAKLAKEISTMTERLEESAQEVGRLKAELILARQRAKELEDRNIIDSGVLLEKLEQSKKKYAADVIALKEEMHRADISWRARLAQKDQDLEVVPVLRRE 948
AEG+E + ++ +AASRQ+AE +S QELQ+EL+A+RL+LLRRSQIIDA+R AY++DVV++KNELMRKSAMT+EEY QGGPGT++ DA+PSLDMR VL LFSPED+FLR+++C+GCGG+LEIV +ETKR+A+L K IS + E + E+A+E +L+AELIL R R KEL++RNI++ L+ KLEQ+++ ADV+ALKE+ R+D +W A++A+KD+ L V+P L +E
Sbjct: 17 AEGHEGGSSLQAVLAASRQRAEAKSAQELQLELEAVRLRLLRRSQIIDALRSAYVRDVVIVKNELMRKSAMTDEEYVAQGGPGTDITDAIPSLDMRPVLALFSPEDAFLRIESCTGCGGHLEIVTKETKRVARLTKRISDLNEAMGETAKEAAQLRAELILTRHRVKELDERNIVNRDTLVAKLEQTQRTCEADVLALKEDARRSDRAWEAKMARKDEQLTVIPALIKE 245
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A6H5K3R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3R7_9PHAE) HSP 1 Score: 258 bits (660), Expect = 3.260e-72 Identity = 138/240 (57.50%), Postives = 190/240 (79.17%), Query Frame = 1
Query: 265 AEGYEE-QNFESAIAASRQQAELRSVQELQMELDAIRLKLLRRSQIIDAIRKAYIQDVVVLKNELMRKSAMTEE--------EYYDQGGPGTNVADAVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLEIVIRETKRMAKLAKEISTMTERLEESAQEVGRLKAELILARQRAKELEDRNIIDSGVLLEKLEQSKKKYAADVIALKEEMHRADISWRARLAQK---DQDLEVVPVLRRE 948
AEG+E + ++ +AASRQ+AE +S QELQ+EL+A+RL+LLRRSQIIDA+R AY++DVV++KNELMRKSAMT+E EY QGGPGT++ DAVPSLDMR VL LFSPED+FLR+++C+GCGG+LEIV +ETKR+A+L K IS + E + E+A+E +L+AELIL R R KEL++RNI++ L+ KLEQ+++ ADV+ALKE+ R+D +W A++A+K D+ L V+PVL +E
Sbjct: 17 AEGHEGGSSLQAVLAASRQRAEAKSAQELQLELEAVRLRLLRRSQIIDALRSAYVRDVVIVKNELMRKSAMTDEVEWVPRRWEYVAQGGPGTDITDAVPSLDMRPVLALFSPEDAFLRIESCAGCGGHLEIVTKETKRVARLTKRISDLNEAMGETAKEAAQLRAELILTRHRVKELDERNIVNRDTLVAKLEQTQRTCEADVLALKEDARRSDRAWEAKMARKASSDEQLTVIPVLTKE 256
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: K0SCS2_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SCS2_THAOC) HSP 1 Score: 78.2 bits (191), Expect = 9.100e-12 Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 1
Query: 355 ELDAIRLKLLRRSQIIDAIRKAYIQDVVVLKNELMR--KSAMTEEEYYDQGGPGT---NVADAVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLEIVIRETKRMAKLAKEISTMTERLEESAQEVGRLKAELILARQRAKE 765
E+D +R L RR++++ AI KAY +DV+V+K L R + ++ G G N +VPS+D+RE L LFSP + LRV C CGG +EI+ RE+ R+A+ I M R EE E+ +K L R+R E
Sbjct: 39 EVDLLRGALHRRNELLGAILKAYHRDVLVIKESLYRAGRHGFAVDDPNISCGEGKHEENSLSSVPSVDLRETLRLFSPHECDLRVSPCYHCGGTVEIIHRESSRLAECKHIIREMKARDEELRLEMVDVKVRAQLDRERVVE 180
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A8K1C264_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C264_PYTOL) HSP 1 Score: 75.5 bits (184), Expect = 1.010e-10 Identity = 55/180 (30.56%), Postives = 89/180 (49.44%), Query Frame = 1
Query: 346 LQMELDAIRLKLLRRSQIIDAIRKAYIQDVVVLKNELM---RKSAMTEEEYYDQGGPGT--------------------------------NVADAVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLEIVIRETKRMAKLAKEISTMTERLEESAQEVGRLKAELILARQRAKELEDRN 780
LQ +L+ +R KL RR++I++ +R+AY DV+V+K EL ++ T Y+ G T + +VPS+D+R+VL LF+P ++ L+V C CGG+LE+V E+K + +E++ T+ + V RL+ E AKE+ED N
Sbjct: 80 LQQQLEMLRGKLARRNKILEVVRRAYYHDVIVVKEELRHVRQQQPSTLHSYHTLGSQSTLSFHHSSTASLAIPPXXXXXXXXXXXXSSRYDDRLASVPSIDLRDVLPLFAPSETVLKVHPCETCGGHLELVHGESKELMAARQEMARATKGEAQMKTIVHRLRVE-------AKEMEDVN 252
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A6G0W5Q9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5Q9_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 7.280e-10 Identity = 58/196 (29.59%), Postives = 99/196 (50.51%), Query Frame = 1
Query: 376 KLLRRSQIIDAIRKAYIQDVVVLKNELMRKSAMTEEEYYDQGGPGTNVADAVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLEIVIRETK----------RMAKLAKEISTMTERLEESAQEVGRLKAELILARQRAKELEDRNIIDSGVLLEKLEQSKKKYAADVIALKEEMHRADISWR--ARLAQKDQDLEV 927
+L RR+ +ID +R AY +D+VV+K L+ + A G + + +PS D+R++L LF+P ++FLRV C CGG +E+V ETK R K + + + RL + +E + +E + R RA E+ ++ + K E+ +K AD LK ++ A + A+L Q+ +L +
Sbjct: 45 RLNRRTMLIDVVRSAYYRDIVVVKEALLAREA---------GASVSERVNTLPSTDLRDLLPLFAPSETFLRVHPCEKCGGVVELVHGETKERNEARQQCNRALKAEQHMKGIVHRLRDELKEATEI-SEALHQRIRALAKENAFTLEQLQVARKAERDQKSTLAD---LKSKLQHATANSNSVAKLTQQLSELNI 227
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A1V9YS95_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YS95_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.280e-9 Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 358 LDAIRLKLLRRSQIIDAIRKAYIQDVVVLKNELMRKSAMTEEEYYDQGGPGTNVAD---AVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLEIVIRETKRM 654
++ + +L+RRS +ID IR AY DV+V+K L K Q P N + A+PS+D+R L LF+P+ ++LRV C CGG LE+V ET +
Sbjct: 46 IEILEQRLVRRSALIDTIRHAYYHDVIVIKENLAAK----------QANPNYNCDERIHALPSVDLRNTLPLFAPDQTYLRVLPCEKCGGTLELVHGETSEL 137
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A7S2KV45_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KV45_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.190e-9 Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1
Query: 334 SVQELQMELDAIRLKLLRRSQIIDAIRKAYIQDVVVLKNELMRKSAMTEEEYYDQGGPGTNV-ADAVPSLDMREV--LTLFSPEDSFLRVKTCSGCGGYLEIVIRETKRMAKLAKEISTMTERLEESAQEVGRLKAELILARQRAKELEDRNIIDSGVLLEKLEQ 819
S +L++E+ +R KL RR+ I+D IRKAY +D++ ++ L R E + +++PSLD+R L LF+P+D LR C CGG LEIV +E KR+ KL T+ LE++ + K L + K LED++ + L E+++Q
Sbjct: 11 SKSDLKLEVANLREKLKRRNTILDTIRKAYHRDIITVQECLYRIQHDENENVCNTISERIMANLESLPSLDIRRNINLRLFAPDDCDLRSNGCYACGGSLEIVHKENKRVKKL----ETL---LEDTVSQANNAKETLEETSVKLKALEDQSKHEVPALEERVKQ 168
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A485LPX2_9STRA (Aste57867_23971 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX2_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.470e-7 Identity = 31/92 (33.70%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 367 IRLKLLRRSQIIDAIRKAYIQDVVVLKNELMRKSAMTEEEYYDQGGPGTNVADAVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLEIVIRE 642
+R ++ RRSQ++D +R AY++DVV++K+ L + ++ E A+PS+D++ +L LFSP ++ L ++ C CGG +E++ R+
Sbjct: 29 LREQVQRRSQLLDELRTAYMKDVVMIKDRLWKHGITSDMELA-----------ALPSVDLKALLPLFSPAETVLHIRPCGTCGGTVELIRRD 109
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A3R6ZEC9_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZEC9_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.070e-6 Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 385 RRSQIIDAIRKAYIQDVVVLKNELMRKSAMTEEEYYDQGGPGTNVADAVPSLDMREVLTLFSPEDSFLRVKTCSGCGGYLE 627
RR+Q++D +R AY++DVVV+K+ L + T+ E A+PS D + +L LFSP +SFLRV+ C+ G YL+
Sbjct: 35 RRTQLLDKLRMAYMRDVVVVKDRLWKHGIRTDAELA-----------ALPSADFKPLLPLFSPAESFLRVRPCTVRGVYLQ 104
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Match: A0A835ZCV7_9STRA (FAD-binding FR-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCV7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.200e-6 Identity = 77/292 (26.37%), Postives = 114/292 (39.04%), Query Frame = 1
Query: 352 MELDAIRLKLLRRSQIIDAIRKAYIQDVVVLK--------------------------------------------------------NELMRKSAMTEEEYYDQGGP----------------GTNVAD---------AVPSLDMREVLT--------LFSPEDSFLRVKTCSGCGGYLEIVIRETKRMAKLAKEISTMTERLEESAQEVGRLKAELILARQRAKELEDRNIIDSGVLLEKLEQSKKKYAADVIALKEEMHRADISWR--ARLAQKDQDLEVVPVLRREVE 954
ME A+R KLLRRS IID +RKAYI DVV +K N ++ SA+ P G+++ AVPSLD+R L LF+P+D FL C CGG+LEIV +ETK++ L +++ +LEE+ + L++ + +E + VLL L+ K A D +A K + R + R +RLA++++DL V E+E
Sbjct: 579 MENQALRAKLLRRSAIIDTLRKAYIADVVAVKQALLLLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKAGGSYLRLNSTLQLSALASPRVEISRSPTMVPPRSPTLPRXXXLGSDITSSASLMDTLAAVPSLDLRGALRVEADLDLDLFAPKDCFLDAWNCEACGGHLEIVSKETKKVEMLTNKLTAAQTQLEEAVSKRAELESSNKTLAAKLEEQWRLTEENRKVLL--LDVRLAKAAGDALAAKADEAREAEARRFTSRLAKREEDLAKVRQQCSELE 868 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1488.3342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1488.3342.1 >prot_F-serratus_M_contig1488.3342.1 ID=prot_F-serratus_M_contig1488.3342.1|Name=mRNA_F-serratus_M_contig1488.3342.1|organism=Fucus serratus male|type=polypeptide|length=280bp MSSMVNELFVEGGQDGPAEGYEEQNFESAIAASRQQAELRSVQELQMELDback to top mRNA from alignment at F-serratus_M_contig1488:97927..104030+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1488.3342.1 ID=mRNA_F-serratus_M_contig1488.3342.1|Name=mRNA_F-serratus_M_contig1488.3342.1|organism=Fucus serratus male|type=mRNA|length=6104bp|location=Sequence derived from alignment at F-serratus_M_contig1488:97927..104030+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1488:97927..104030+ >mRNA_F-serratus_M_contig1488.3342.1 ID=mRNA_F-serratus_M_contig1488.3342.1|Name=mRNA_F-serratus_M_contig1488.3342.1|organism=Fucus serratus male|type=CDS|length=1680bp|location=Sequence derived from alignment at F-serratus_M_contig1488:97927..104030+ (Fucus serratus male)back to top |