mRNA_F-serratus_M_contig1483.3332.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE) HSP 1 Score: 242 bits (617), Expect = 2.470e-73 Identity = 106/175 (60.57%), Postives = 135/175 (77.14%), Query Frame = 1
Query: 265 GKLVLHVRSGDIFKDEVLWYYGQPPLQFYMYVIGNRKWDRIDVITNAENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARSTLVALTSFHSTATRIYGPVECNEQLTQLAKVRPEAKVYGLSWPRQYSVYQNWKNTPDQREEMLKYTNITGLLQCTG 789
G LVLHVRSGDIF D+VL YYGQPPLQFY+ VI + WD +D++TN++ LNPV+PALQA D+G+LP+++H+HTNR+M EDL SM C D L +ARSTLV+LT FHS A R+YGP +CN Q QLA +RPE + YG+ W +Y VY++W+NTP+QREEML Y I G QC+G
Sbjct: 352 GNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQCNAQFKQLALIRPEVQAYGIDWAGEYGVYKSWENTPEQREEMLAYDKIVGFNQCSG 526
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 232 bits (592), Expect = 5.860e-71 Identity = 123/265 (46.42%), Postives = 160/265 (60.38%), Query Frame = 1
Query: 1 LRECVKKVPRLLGCEAAYYFPMDIDVCLDGE--LKAAGEVGGGGGLSAEHDGKRRISDDVRLQGDVDDRREEGEXXXXXXXXADGEEENGGKLVLHVRSGDIFKDEVLWYYGQPPLQFYMYVIGNRKWDRIDVITNAENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARSTLVALTSFHSTATRIYGPVECNEQLTQLAKVRPEAKVYGLSWPRQ--YSVYQNWKNTPDQREEMLKYTNITGLLQC 783
+R+C+ K PRLLGCEAAYYFP DI VC + A G+ GG G LVLHVRSGDIF D V+ Y GQPPLQFY+ ++ ++ WDRIDV+TN +N ++NPVVPAL A + +G LP+N++ HT RSM EDL+SM+C D+LG+A+S+LV S+HSTA R+Y P CN L +LA++RP+ KVYGL R YSVY++W+NTP+QR EML Y T +C
Sbjct: 184 IRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGA--------------------------------------------GNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 404
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE) HSP 1 Score: 190 bits (483), Expect = 2.080e-53 Identity = 126/276 (45.65%), Postives = 168/276 (60.87%), Query Frame = 1
Query: 1 LRECVKKVPRLLGCEAAYYFPMD--IDVCLDGELKAAGEVGGGGGLSAEHDGKRRISDD---VRLQ-GDVDDRREE----GEXXXXXXXXADGEEENGGKLVLHVRSGDIFKDEVLWYYGQPPLQFYMYVIGNRKWDRIDVITNA--ENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARSTLVALTSFHSTATRIYGPVECNEQLTQLAKVRPEAKVYGL-SWPRQYSVYQNWKNTPDQREEMLKYTNITGLLQCTG 789
L EC+K++PR+ GCEAAY+FP D +D+C E S D + DD VRL G+ RE XXXXXXXX E + G LV+HVRSGDIF Y GQPPLQ+Y+ I +++WDR+DV+T+ + + ++NPVVPAL+AK GEL N+H H NR++ EDLR M+C D ARSTL + S HS+A R+Y P+ CNE+L L+ RP +V+G+ SW QY+VYQ W NT DQ EM+ + ++ G QCT
Sbjct: 272 LFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNN-----SNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFVRPHPDY-GQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMACNEKLKTLSTERPGTQVFGMASWNDQYTVYQRWNNTADQLTEMMTF-DVGGFEQCTA 540
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.770e-47 Identity = 106/265 (40.00%), Postives = 152/265 (57.36%), Query Frame = 1
Query: 10 CVKKVPRLLGCEAAYYFPMDIDVCLDGELKAAGEVGGGGGLSAEHDGKRRISDDVRLQGDVDDRREEGEXXXXXXXXADGEEENG--GKLVLHVRSGDIFKDEVLWYYGQPPLQFYMYVIGNRKWDRIDVITNA--ENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARSTLVALTSFHSTATRIYGPVECNEQLTQLAKVRPEAKVYGL-SWPRQYSVYQNWKNTPDQREEMLKYTNITGLLQCTG 789
C+K++P ++GCEAAY+FP D+ V + E GG + ++ D +Q D ++ E XXXX G G LV+HVRSGDIF YGQ +Y+ I +++WDR+DV+TN + + ++NP+VPAL+AK G+LP N+H H NR+M EDL SM+C D ARSTL + S S+A R+Y P CNE+L L P +V+G+ SW +Y+V++ W NT DQ EM+ ++ G QCT
Sbjct: 280 CIKELPWIIGCEAAYFFPTDMAV----PMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSCNEELKNLGTEGPGTQVFGMASWDHEYTVFRRWNNTADQIAEMMT-ADVGGFEQCTA 535
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 171 bits (432), Expect = 3.520e-46 Identity = 112/290 (38.62%), Postives = 148/290 (51.03%), Query Frame = 1
Query: 1 LRECVKKVPRLLGCEAAYYFPMDIDVCLDGELKAAGEV------GGGGGLSAEHDGKRRISDDVRLQGDVDDRREEGEXXXXXXXXADGEEENGGK----LVLHVRSGDIFKDEVLWYYGQPPLQFYMYVIGNRKWDRIDVITNAENSTS--LNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDA-LGIARSTLVALTSFHSTATRIYGPVECNEQLTQLAKVRPEA------------KVYGLSWP--RQYSVYQNWKNTPDQREEMLKYTNITGLLQCTG 789
L CV+ VPRL GCEAAY+FPM +DVCL + A G+V G G S K + G EE G+ LV+HVRSGDIF D YGQPPLQ+Y+ I ++KWDR+D++TN +NPV+PAL+ GEL N++ H +R+M ED SMMC L ARS+L L + HS+A+R+Y P C L + P+A KVYG+ P +YS+ +W NT DQ EML + N++ QC G
Sbjct: 248 LSTCVETVPRLTGCEAAYFFPMGVDVCLS-DRTATGDVVHEQRGNGASGRSGPGVKKNLV----------------------------GSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLDDELQAVKVYGVKPPGMERYSLDVSWNNTADQVNEMLTF-NVSSFEQCGG 507
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 144 bits (364), Expect = 8.670e-37 Identity = 75/203 (36.95%), Postives = 113/203 (55.67%), Query Frame = 1
Query: 247 GEEENGGKLVLHVRSGDIFKDEV----LWYYGQPPLQFYMYVIGNRKWDRIDVITNAENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARSTLVALTSFHSTATRIYGPVECN----------------EQLTQLAKVRPEAKVYGLSWPR---QYSVYQNWKNTPDQREEMLKYTNITGLLQCT 786
G+ + G LV+H+RSGDIF +GQPPLQ+Y++V+G + WD + +T A N ++NP L+ +G L +N+ + NRS+ ED+R M+C DAL +RS++ LT HS AT + P C + T L +P+A+VYG +WP +YSVYQ W +TP+Q EM + I G+ +C+
Sbjct: 245 GKRKGAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKCS 447
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE) HSP 1 Score: 131 bits (329), Expect = 5.630e-32 Identity = 69/183 (37.70%), Postives = 100/183 (54.64%), Query Frame = 1
Query: 262 GGKLVLHVRSGDIFKDEV--LWYYGQPPLQFYMYVIGNRKWDRIDVITNAENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARSTLVALTSFHSTATRIYGPVECNEQ----LTQLAKVRPEAKVYGLSWP---RQYSVYQNWKNTPDQREEMLKYTNITGLLQC 783
G LV+H+RSGDIF E+ + +YGQPPLQFY+ VIG+R W I V+TNA NP LQ G L + + +R + DLR M+C + + +A+S++ L HS A R + P C + ++ RP+ +VYG+ W +YSVY W NT QR EM+ + + +C
Sbjct: 236 GQSLVVHMRSGDIFSPELSDIPWYGQPPLQFYLKVIGSRPWSNISVLTNARIQREFNPTFGVLQELDKQGLLGAPANFYADRDLYTDLRDMLCAENVVLAKSSITRLLVRHSRAKRFFLPTSCARGGPFFVDRICLYRPDVEVYGIEWKTTLNEYSVYDEWINTDAQRLEMITSDEVKSIQRC 418
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE) HSP 1 Score: 119 bits (297), Expect = 2.200e-27 Identity = 65/193 (33.68%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 250 EEENGGKLVLHVRSGDIFKDEVLWY-YGQPPLQFYMYVIGNRKWDRIDVITNAENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARSTLVALTSFHSTATRIYGPVECNEQL-----------TQLAKVRPEAKVYGLSW---PRQYSVYQNWKNTPDQREEMLKYTNITGLLQC 783
E G LV+HVRSGDIFK +++ YGQPPL +Y+ VI ++ W+++ +T+ E+ LNP ++ G L N+ +H +R + EDL++M+C D+L ++ ST L HS A R + P C Q+ T + R E +VYG+ W Y+VY +W + + E M+ ++ G+ +C
Sbjct: 235 ERRGAGSLVVHVRSGDIFKPGTIYHQYGQPPLLYYLAVIASKPWNKMSFVTSGEDDL-LNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGDTTLNHFANATMICLQRSEVEVYGIEWRTTSEAYTVYDSWDPSSNLLE-MVVSDSVKGMQRC 425
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: A0A5C2HP59_9GAMM (Uncharacterized protein n=1 Tax=Ectothiorhodospiraceae bacterium BW-2 TaxID=947515 RepID=A0A5C2HP59_9GAMM) HSP 1 Score: 79.3 bits (194), Expect = 2.750e-13 Identity = 51/174 (29.31%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 271 LVLHVRSGDIFKDEVLWY-YGQPPLQFYMYVIGNRKWDRIDVITNAENSTSLNPVVPALQAKKDSGELPENLHIHTNRSMAEDLRSMMCTDALGIARST----LVALTS-------FHSTATRIYGPVECNEQLTQLAKVRPEAKVYGLSWPRQYSVYQNWKNTPDQREEMLKY 756
L +H+R+GDIF D + YGQPPL FY+ V+ R+W + ++ E NPVV AL+ + D+ +LP ++ + ++A+D+ + + L I R T L+ L+ F T ++G + + + ++ Q ++ NW+NTP+QR++ML Y
Sbjct: 235 LTIHLRAGDIFSDNTPHFGYGQPPLAFYIAVLQQRRWHAVQLVYEDEG----NPVVAALKTELDNRKLPYSI---ASGTLADDIAILAAAEHLVIGRGTFTYPLICLSKVVKTVYYFQIDKTAVWGLERSDIKFVL---------IQDINGNYQQTILANWRNTPEQRQQMLTY 392
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Match: A0A6H5JZ49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ49_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 7.840e-10 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 253 EENGGKLVLHVRSGDIFKDE------VLWYYGQPPLQFYMYVIGNRKWDRIDVITNAENST-SLNPVVPALQAKKDSGELPENLHIH 492
EEN G LV+H+RSGDIFK E ++WY GQPPL FY V+ + W ++D+I+NA LNP L+ G L N+ H
Sbjct: 124 EENPGTLVIHIRSGDIFKPEKEGWHGMIWY-GQPPLLFYEDVMSSAPWVQVDIISNANGEEHQLNPTFGVLEDLASRGLLQLNVTTH 209 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1483.3332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1483.3332.1 >prot_F-serratus_M_contig1483.3332.1 ID=prot_F-serratus_M_contig1483.3332.1|Name=mRNA_F-serratus_M_contig1483.3332.1|organism=Fucus serratus male|type=polypeptide|length=264bp LRECVKKVPRLLGCEAAYYFPMDIDVCLDGELKAAGEVGGGGGLSAEHDGback to top mRNA from alignment at F-serratus_M_contig1483:145435..147739+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1483.3332.1 ID=mRNA_F-serratus_M_contig1483.3332.1|Name=mRNA_F-serratus_M_contig1483.3332.1|organism=Fucus serratus male|type=mRNA|length=2305bp|location=Sequence derived from alignment at F-serratus_M_contig1483:145435..147739+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1483:145435..147739+ >mRNA_F-serratus_M_contig1483.3332.1 ID=mRNA_F-serratus_M_contig1483.3332.1|Name=mRNA_F-serratus_M_contig1483.3332.1|organism=Fucus serratus male|type=CDS|length=1584bp|location=Sequence derived from alignment at F-serratus_M_contig1483:145435..147739+ (Fucus serratus male)back to top |