mRNA_F-serratus_M_contig1481.3327.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: D8LMH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH7_ECTSI) HSP 1 Score: 257 bits (656), Expect = 7.150e-72 Identity = 167/398 (41.96%), Postives = 215/398 (54.02%), Query Frame = 2
Query: 167 MPPKKKQSKDKKNERESVPDIVDFTRRPLPPLEPCDANPTPRVERWIVSAHHAFEEWDEETLDAEAWSVPGDKPFKDDEGRSYLPSKLSKMAIGWARPSELIAT-----GKTDEPNNDPGTKSGQGASPGTRRKSAV--ADKGRGKXXXXXXX-PSLAQAPLRDATVDADGKLLPRVLVPIVEVCKPHFRTYVNTYSTLHRRYCLQATHSEASDYDSRAAAKSLPRGFRQGWSQDQLGMIASYCSSTSEQRRNIQEQPQAPPGDTDGNINKTPLKEIVENPGMKVGVGEAM-------PREQLTQEALEQLGAPAGGDVDPDMTAIFKAVAQLSATCSATGCPYLWEAIHPQTAEKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAAS 1315
MPPK +KDKK ++E +P +D+TRRPL EPCDA P PR E +VSAHHAFEEWD++ L W + +PF+D +GRS+LP+++S W RP+EL+ GK + + G G G + G + A ADKG XXXXXXX PS+ L D VD G LPR+ VP + N +T L ++S ++ +LPRGF+ GWS+ Q IAS ++ E P L E + LGAP+GGD+DP MTAIFKA+ QLS+T S+TGCP LWE I+P+TA +VPCYNP GRYL+KLFAAGRWR+VEVDD IPLDAT PV + S
Sbjct: 1 MPPK---AKDKKGKQEVLPVGIDYTRRPLASAEPCDARPPPRRELPVVSAHHAFEEWDDDALLEMEWGMVRAEPFEDKDGRSFLPARISARVARWVRPTELLTNETGEDGKEEHQQHSSGAVGGNGTASGVEKGKAGGGADKGXXXXXXXXXXXPSVEPVVLEDVAVDLQGNPLPRIFVPRAAIV-------ANDSATDEGAQTLSQVAKQSSVPNA-----TLPRGFKTGWSESQRRDIASLLCKYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSGDWSKEPPAYLRDEDIATLGAPSGGDIDPAMTAIFKAIDQLSSTVSSTGCPLLWETIYPKTANEVPCYNPCGRYLIKLFAAGRWRRVEVDDSIPLDATGRPVRSFS 383
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: A0A835Z5F8_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5F8_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.390e-22 Identity = 99/285 (34.74%), Postives = 131/285 (45.96%), Query Frame = 2
Query: 932 DTDGNINKTPLKEIVENPGMKVGVGEAMPREQLTQEA------LEQLGAPAGGDVDPDMTAIFKAVAQLSATCS-ATGCPYLWEAIHPQTAEKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAASENPA----ELWPSLLSKALYKLYRLGGYGLARDAAVGAVDLKIEDCRDDRTGDQVDR---ARLMAFVLHSLTGWIPSIIADRVPSVEEVSVAGTPRLSREDLLLPGLPPIDEEEEAARERLEDMKRRQALFLHKKRKPKKIRRKVVSAKE 1744
D GN+ L IV PG G A A L AP P + ++F+AVA+LS T + P+LWEAIHPQ A P YNP GR+ ++L+AAG WR V VDD +P+ A +P+L + ELWP LLSKAL KL G L D A L AF L +LTGW P+ + + P++ + AG P L LP + D E QALFLHK+R+P+++ R+ SA+E
Sbjct: 143 DDQGNL----LPRIVLLPGEDAAAGTASTAATSPATAARPPRCLHSALAPGSSCCQP-LVSVFEAVARLSTTLADCVDAPFLWEAIHPQDASGRPVYNPGGRHAVRLWAAGAWRSVAVDDAVPVSAGGAPLLPHAAGXXXXARELWPLLLSKALLKLAAAAGMPLPGXXXXXXXXXXXXXXXXXSAEDTAAAHCCAALSAFCLSALTGW-PTWV-EAAPALA-AAAAGAPALPARAFALPDVWREDAACEREXXXXXXXXXXQALFLHKQRRPRRVERRFASAEE 419
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: D8LMH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH9_ECTSI) HSP 1 Score: 107 bits (266), Expect = 8.260e-22 Identity = 87/245 (35.51%), Postives = 117/245 (47.76%), Query Frame = 2
Query: 4904 KVEMMHETSQFDSENREVERWEAAEPGRASRAALLWNQRQAANAASSGGAILASQPTTMAAVQGSEVDEEWITARAAALGVPVELEKERQASRSALQDYPQMAQAPLRGSASSAPGSLPWSPESPAIRTAATKLGPEKLQAREKERSEFEVKATDFELDWEAERVKKAEAGKEQIAMQLAFIRGQVQCINAGRERFLRDRERIVQDMIAKAEARKAKIAMEQEAFKIAAKAKDKKKPIKGKAGKK 5638
+VEM H+ S+ DSEN+EVE WEAA PGRA RAALLW QRQA+ AS G +R + S+ + + + S P +P + + E+++ R ER +FE WEA+RV EAG +++AMQL +IRG+ + I R FLRDRE IVQD+IAK ARK + E+ A + K K+ KGK GKK
Sbjct: 44 EVEMAHDMSRVDSENKEVESWEAATPGRADRAALLWTQRQASKVASLGNG-------------------------------------DRSLTSSSSPENVATSSPTTSSNVSVNPKPVP-----------SALISDEEMKKRADERVALRQTTMEFEKKWEADRVDMVEAGMQEMAMQLEYIRGREESIKQARLPFLRDRETIVQDLIAKMRARKEAVEEERAALEPTTKGGKTKQATKGKPGKK 240
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: A0A7S2C2Q4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2Q4_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.180e-21 Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = 2
Query: 1148 PYLWEAIHPQTAEKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAASENPAELWPSLLSKALYKLYRLGGYGLARD----AAVGAVDLKIEDCRDDRTGDQVDRARLMAFVLHSLTGWIPSII 1531
P LW +I+PQ +E P YNPSG+Y++KL+ AG WR + +DD +P+DA V+A S E+WPSLL+KALYKLY + +G+ +GAV +D +AFV+ +L+GW+P ++
Sbjct: 13 PKLWSSIYPQDSEGRPSYNPSGKYVVKLWVAGAWRAITIDDRMPVDANGYLVIANSTTSREIWPSLLAKALYKLYSMSSFGVTHQDLLHGTMGAV-------KDAEGPSSTGVGSFVAFVVQALSGWLPDVM 137
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: A0A485KNS5_9STRA (Aste57867_9804 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNS5_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.610e-20 Identity = 109/401 (27.18%), Postives = 174/401 (43.39%), Query Frame = 2
Query: 227 IVDFTRRPLPPLEPCDANPTPRVERWIVSAHHAFEEWDEETLDAEAWSVPGDKPFKDDEGRSYLPSKLSKMAIGWARPSELIAT-GKTDEPNNDPGTKSGQGASPGTRRKSAVADKGRGKXXXXXXXPSLAQAPLRDATVDADGKLLPRVLVPIVEVCKPHFRTYVNTY-----STLHRRYCLQATHS-------EASDYDSRAAAKSLPRGFRQGWSQDQLGMIASYCSSTSEQRRNIQEQPQAPPGDT-DGNINKTPLKEIVENPGMKVGVGEAMPREQLTQEALEQLGAPAGGDVDPDMTAIFKAVAQLSATCSATGCPYLWEAIHPQTA-----EKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAASENPAELWPSLLSKALYKLY 1372
IV R LPP P + P V V F EW++ L+ E W P +P++D G LP + I W RPS+ + + +P P G GA ++ A +G+ P + P R V D L P +VP +E P F ++ + R + + H EA ++ + + IA++ +T + + ++ GD DG P +P + + + P ++ ++ + P G VDP + + + V++L A PY WEAI+PQT ++P +P G+YL+KLF G+WRK+ VDD +PLD V+ +S PAE+WPSLL+KA+YK++
Sbjct: 24 IVSDERERLPPRAPLENVPPLFVPS--VFPKECFPEWND-NLELENWGNPN-QPYEDPMGLPPLPPHILTSNITWKRPSQYLPPLPEPAKPVAAPIKTPGGGA----KKVGAPPPPKKGEPEVK---PDELKVP-RCCYVLYDASLDP--MVPQLESAHPGFAPPLHAERLEWANDFQRVWSAEQAHDIKRWEVEEARIQKEHEEKEAALMAYEEACLVKLQKAIAAHKQATEAE---LNDEDLLDDGDDGDGTTFDFPTPGTTPSPVLFADIFGSAPVIEIEPNSVTKPTIPEGDYVDPPLASCCRVVSRLVDRLVANQ-PYYWEAIYPQTTVAATNRRIPIVSPGGKYLVKLFVMGKWRKIAVDDRLPLDDQGKVVVLSSSQPAEIWPSLLAKAIYKVF 406
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: A0A7S2C202_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C202_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.990e-20 Identity = 104/428 (24.30%), Postives = 157/428 (36.68%), Query Frame = 2
Query: 3302 PLTVASAKIHLTKGGLPKVYRVVLEPGFGCCVGFCCTHAIQTGDAGQIWKAMGHNLVTETGNYSAARPGEWRIVFRGAFRVGNRQGQDGHMNDTPDARADTTGASAG---GLGAAKKQMQLPERSFVYLAHNSHEIDATCGPPIYEQHR--------------GPPSCVATF-VKAILHISDEAARPSVRLVLVDEDEGTEMFQPLLHTNAIPLYPNIKGYTVLATVCSRTKLLAKGNWRLQLLSDSPLLPLDEPGDKRNGRGSGKASRPGFTPARDEGKEPGPTIVACQERTVYGGVYVPNKYLLLFRDVLTCA-SRLPFAARLRTALPGVGLCLTFLDAATGEVLREGRGSQLLQVLSVNPPQAPAHSNQEPPSPKKAAKQRKGPTGAAAEEPTAMPPGNVIIEAAIDRERMQVPANFVSELPYYF 4528
P + +A++ +Y+V L G V F + A++ G +WK +G + G Y A W+++FR F + P++ A G G AAK+ + PPS F ++ + + D A P +R+V +D D G E PLL T +P N KGYTV+ + LA G+W++ L+ PL +E G V C T + GVY PNKY LFRDVL + A RL P + + L DA + E++ RG + + + S+ P +GA E +++EA +D E M++PA VS PYYF
Sbjct: 5 PFSTLTAELPPATDDAGHLYKVSLNAPAGAAVTFASSTALEVGTTADVWKKVGGYVAVAEGTYDAITADYWQVIFRRIFTAPEP------LEIKPESPAAAEGXXXXXXEGEEAAKEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPSTFREFLIRLQVEVPDSDAAPFMRIVTIDNDTGVETVHPLLETAYMPWAKNEKGYTVMLVAYTPRYELAAGSWKMTALTSLPL-------------------------EGEEAVAAGIEEVPCGTTTQFSGVYTPNKYHRLFRDVLVSEDATYKLALRLALVDPSLYVRLEVFDAKSLELVCSVRGRKTVTLHSIVIP-----------------------SGAGEE--------GLVVEATLDNEFMEMPAALVSRYPYYF 370
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: A0A397ER62_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ER62_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.090e-18 Identity = 47/120 (39.17%), Postives = 75/120 (62.50%), Query Frame = 2
Query: 1025 QLTQEALEQLGAPAGGDVDPDMTAIFKAVAQLSATCSATGCPYLWEAIHPQTA----EKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAASENPAELWPSLLSKALYKLY 1372
++ ++ + P G VD + + + +++L A PY WEAI+PQT ++P NP G+YL+KLF G+WRK+EVDD +PLD V+ +S P+E+WP+LL+KA+YK++
Sbjct: 92 EIEPNSVVKPSVPEGDYVDSPLASGCRVISRLVDRMVANQ-PYFWEAIYPQTVTATNRRIPTVNPGGKYLVKLFVMGKWRKIEVDDRMPLDDQGKVVVLSSSQPSEIWPTLLAKAIYKVF 210
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: W2R2I1_PHYPN (Calpain catalytic domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R2I1_PHYPN) HSP 1 Score: 103 bits (257), Expect = 3.600e-18 Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 2
Query: 1016 PREQLTQEALEQLGAPAGGDVDPDMTAIFKAVAQL---SATCSATGCPYLWEAIHPQTAEKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAASENPAELWPSLLSKALYKL 1369
PR ++ A+ + P G + DM + F+ V QL S T + P+LW+AI+PQ P YNP G+Y +KLF GRWR++++DD +PLDA + AS E+WPSLL KALYK+
Sbjct: 335 PRIEIAPNAVYKPEIPHGDVIHADMASYFRIVEQLYDSSKTSNNCMAPFLWQAIYPQDNTGQPVYNPGGKYSVKLFVFGRWRRIDIDDKLPLDADGKVIYLASSMKNEIWPSLLVKALYKV 455
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: A0A2D4C107_PYTIN (Calpain catalytic domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C107_PYTIN) HSP 1 Score: 102 bits (255), Expect = 5.720e-18 Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 2
Query: 1016 PREQLTQEALEQLGAPAGGDVDPDMTAIFKAVAQLSATCSATG-CPYLWEAIHPQTAEKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAASENPAELWPSLLSKALYKLYRLGGYGLARDAAVGAVDLKIEDCRDDRTGDQVDRARLMAFVLHSLTGW 1516
PR + A+ + P G V PDM + F+ + QL G PYLWEAI+PQ VP Y+P G+Y +KLF G+WR+V+VDD P+D L +S AELWPS+L+KA+ K++ G+A+D GD +A+L + ++TGW
Sbjct: 301 PRIDIAPNAVIKPTNPHGEVVHPDMASYFRIIDQLYPHWGRAGETPYLWEAIYPQDTHGVPVYSPCGKYSVKLFVMGKWRRVDVDDCFPVDEEGEIQLVSSSMRAELWPSILAKAILKVFHW--VGVAQDH-----------------GDAHQKAQL---AISAMTGW 446
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Match: W4GWQ1_9STRA (Calpain catalytic domain-containing protein n=14 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWQ1_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.890e-18 Identity = 113/427 (26.46%), Postives = 181/427 (42.39%), Query Frame = 2
Query: 167 MPPKKK---QSKDKKNERESVPDIVDFTRRPLPPLEPCDANPTPRVERWIVSAHHAFEEWDEETLDAEAWSVPGDKPFKDDEGRSYLPSKLSKMAIGWARPSELIATGKTDEP----NNDPGTKSGQGASPGTRRKSAVADKGRGKXXXXXXXPSLAQAPLRDATVDADGKLLPRVLVPIVEVCKPHFRT--------YVNTYSTL---HRRYCLQATHSEASDYDSRAAAKSLP-RGFRQGWSQDQLGMIASYCSSTSEQRRNIQEQPQAPPGDT--DGNINKTPLKEIVENPGMKVGVGEAMPREQLTQEALEQLGAPAGGDVDPDMTAIFKAVAQLSATCSATGCPYLWEAIHPQTA----EKVPCYNPSGRYLLKLFAAGRWRKVEVDDDIPLDATRSPVLAASENPAELWPSLLSKALYKLY 1372
M PKK SK K+ ++ P ++ R P P N P I+ +F EW+E LD E W PF+D G LP + +I W RP + + EP + P K+ G GT++ + + K P + R V D L P +V E +P F + N + + + + ++ +E + S K L + + IA++ +T + + GDT D TP + + + P ++ ++ + P G VD + + + +++L A PY WEAI+PQT ++P NP G+YL+KLF G+WRKVEVDD +PLD V+ +S P+E+WP+LL+KA+YK++
Sbjct: 1 MGPKKPAAASSKPVKDVQDDGPQVIVSEDRERHPTRPPPENVPPLYVPSIMPKE-SFPEWNE-NLDQENWYT-ATAPFEDPMGLPVLPPHIDTSSITWKRPHQYLPP--LPEPPKLTTSAPAVKTPGG---GTKKGNLASGKKIESIDAKAEEPKVP----RCCYVLYDSSLDP--MVEKFEGTQPGFAPPLTAERLDWANDFQRVWSAEQAHDIKRWDTEEARIQSEKEKKELALMAYEESCLIKLQKAIAAHKQATEAELNDEDLLDDGDDGDTTFDFPAAGTPAPLLFNE------IFGSAPVIEIEPNSVVKPSVPEGDYVDSPLASGCRVISRLVDRMVANQ-PYFWEAIYPQTVTATNRRIPTVNPGGKYLVKLFVMGKWRKVEVDDRMPLDDQGKVVVLSSSQPSEIWPTLLAKAIYKVF 406 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1481.3327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1481.3327.1 >prot_F-serratus_M_contig1481.3327.1 ID=prot_F-serratus_M_contig1481.3327.1|Name=mRNA_F-serratus_M_contig1481.3327.1|organism=Fucus serratus male|type=polypeptide|length=1825bp MPPKKKQSKDKKNERESVPDIVDFTRRPLPPLEPCDANPTPRVERWIVSAback to top mRNA from alignment at F-serratus_M_contig1481:22690..60144- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1481.3327.1 ID=mRNA_F-serratus_M_contig1481.3327.1|Name=mRNA_F-serratus_M_contig1481.3327.1|organism=Fucus serratus male|type=mRNA|length=37455bp|location=Sequence derived from alignment at F-serratus_M_contig1481:22690..60144- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1481:22690..60144- >mRNA_F-serratus_M_contig1481.3327.1 ID=mRNA_F-serratus_M_contig1481.3327.1|Name=mRNA_F-serratus_M_contig1481.3327.1|organism=Fucus serratus male|type=CDS|length=10950bp|location=Sequence derived from alignment at F-serratus_M_contig1481:22690..60144- (Fucus serratus male)back to top |