mRNA_F-serratus_M_contig148.3311.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI) HSP 1 Score: 191 bits (486), Expect = 1.600e-52 Identity = 92/117 (78.63%), Postives = 104/117 (88.89%), Query Frame = 2
Query: 182 PAPSDKRNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLNGFGVEDPNLQRKLF 532
P SD+RN RFKLIP+VI GPWM+RKA+GSTPVLLGTKI HR+YRGE Y+ETD+DTGSS AAA+LC RCR SR IDVELG+VLQAN+ QELPEALLGAVRLNGFGVEDP+LQ KL+
Sbjct: 353 PPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCGRCRGLSRKIDVELGIVLQANSAQELPEALLGAVRLNGFGVEDPDLQTKLY 469
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A6H5K9Q7_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q7_9PHAE) HSP 1 Score: 189 bits (479), Expect = 4.570e-50 Identity = 90/117 (76.92%), Postives = 104/117 (88.89%), Query Frame = 2
Query: 182 PAPSDKRNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLNGFGVEDPNLQRKLF 532
P SD+RN RFKLIP+VI GPWM+RKA+GSTPVLLGTKI HR+YRGE Y+ETD+DTGSS AAA+LC+RCR SR IDVELG+VLQAN+ ELPEALLGAVRL+GFGVEDP+LQ KL+
Sbjct: 546 PPYSDERNTRFKLIPRVIGGPWMVRKAVGSTPVLLGTKITHRYYRGERYVETDMDTGSSPAAASLCSRCRGLSRKIDVELGIVLQANSAHELPEALLGAVRLSGFGVEDPDLQTKLY 662
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.110e-29 Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 2
Query: 203 NQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLNGFGVEDP 511
N RFKLIP+++ GPW++R+A+G+ P LLGTK+ R++RGEHY+ET+++ GSS+ A + CR +S IDV+LGVVLQ LPE LLG V+ V+DP
Sbjct: 54 NSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNVEVGSSVVAQRIIGCCRGYSGRIDVQLGVVLQGEEADTLPEELLGTVQFRWLQVDDP 156
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.990e-27 Identity = 52/99 (52.53%), Postives = 70/99 (70.71%), Query Frame = 2
Query: 194 DKRNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLN 490
D RN+RFKLIP ++ GP+++R A+G+ P LLG K+ R+YRG HY+ETD+D SS AA + + CR S + V+LG+VL+ A ELPE LG VRLN
Sbjct: 2 DFRNERFKLIPSIVEGPFLVRGAVGNKPALLGRKLTQRYYRGAHYVETDVDVASSSVAAHIVSMCRGASNGLSVDLGIVLEGRARAELPERCLGVVRLN 100
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.510e-24 Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 2
Query: 161 PDGRGSSPAP----SDKRNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLNGFGVE 505
P R S PA D RNQRFKLIP V+SGP+++RKA+G+ P LLG K+ R++RG Y+ETD+D GSSM A + + CR +++ + VELG+ L+ +ELPE ++G +RL ++
Sbjct: 507 PADRNSDPAGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDVDVGSSMIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNVDID 625
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A2P4X7C6_9STRA (EDR2_C domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7C6_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.920e-21 Identity = 45/102 (44.12%), Postives = 72/102 (70.59%), Query Frame = 2
Query: 188 PSDK-RNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLN 490
P+D+ R QR KLIP+V+ G W +R+ +G+TP +LGTKI+ ++Y+G++Y+E D D GSS A + +SR++ ++L V++A + ELPE +LG VRL+
Sbjct: 39 PNDEFRTQRIKLIPRVVQGTWPIREGVGTTPAILGTKIYQKYYQGKNYLEADYDIGSSTVATGILKLLLGYSRDLIIDLAFVIEAQSAMELPERVLGTVRLD 140
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A7S3XTA9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTA9_HETAK) HSP 1 Score: 99.0 bits (245), Expect = 4.940e-21 Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = 2
Query: 203 NQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRL 487
N RFKL+P ++ GPW+ ++A+ + P +LG KI R++R EHY+E DLD GSS+ A + CR ++ N+ V++G+ L+ ELPE LL A R+
Sbjct: 42 NLRFKLVPSIVEGPWICQRAVKNKPAILGQKITQRYFRTEHYLEVDLDIGSSVVADKIVGLCRGYAVNLVVDIGITLEGQTGAELPEVLLAATRM 136
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 105 bits (261), Expect = 6.740e-21 Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 2
Query: 200 RNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLNGFGVE 505
RNQRFKLIP + GP+++++A+G+ P LLG K+ R++RGEHY+ETD+ GSS A + CR + + + VE+G+VL+ + ELPE L+G R +E
Sbjct: 374 RNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDVHVGSSAIANQVVGLCRGYCKALTVEIGIVLEGRSEAELPEKLIGVGRFKKIDIE 475
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A2P4XSH2_9STRA (EDR2_C domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSH2_9STRA) HSP 1 Score: 100 bits (248), Expect = 7.750e-21 Identity = 45/102 (44.12%), Postives = 72/102 (70.59%), Query Frame = 2
Query: 188 PSDK-RNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLN 490
P+D+ R QR KLIP+V+ G W +R+ +G+TP +LGTKI+ ++Y+G++Y+E D D GSS A + +SR++ ++L V++A + ELPE +LG VRL+
Sbjct: 95 PNDEFRTQRIKLIPRVVQGTWPIREGVGTTPAILGTKIYQKYYQGKNYLEADYDIGSSTVATGILKLLLGYSRDLIIDLAFVIEAQSAMELPERVLGTVRLD 196
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Match: A0A5D6XQP0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQP0_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.720e-20 Identity = 45/97 (46.39%), Postives = 70/97 (72.16%), Query Frame = 2
Query: 200 RNQRFKLIPKVISGPWMMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFSRNIDVELGVVLQANAPQELPEALLGAVRLN 490
R++R KLIP+V+ G W +R+ +G+TP +LGTK + +++RG Y+E D D GSSM AA+LC +SR++ ++L VL+ + +ELPE +LG VRL+
Sbjct: 911 RSKRMKLIPRVVQGTWPIREGVGTTPAILGTKTYQKYFRGTQYLEVDYDIGSSMVAASLCKMLLGYSRDLIIDLAFVLEGQSREELPERVLGCVRLD 1007 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig148.3311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig148.3311.1 >prot_F-serratus_M_contig148.3311.1 ID=prot_F-serratus_M_contig148.3311.1|Name=mRNA_F-serratus_M_contig148.3311.1|organism=Fucus serratus male|type=polypeptide|length=98bp MMRKAIGSTPVLLGTKIHHRHYRGEHYIETDLDTGSSMAAAALCTRCRWFback to top mRNA from alignment at F-serratus_M_contig148:12269..15063- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig148.3311.1 ID=mRNA_F-serratus_M_contig148.3311.1|Name=mRNA_F-serratus_M_contig148.3311.1|organism=Fucus serratus male|type=mRNA|length=2795bp|location=Sequence derived from alignment at F-serratus_M_contig148:12269..15063- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig148:12269..15063- >mRNA_F-serratus_M_contig148.3311.1 ID=mRNA_F-serratus_M_contig148.3311.1|Name=mRNA_F-serratus_M_contig148.3311.1|organism=Fucus serratus male|type=CDS|length=588bp|location=Sequence derived from alignment at F-serratus_M_contig148:12269..15063- (Fucus serratus male)back to top |