mRNA_F-serratus_M_contig1473.3285.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 234 bits (597), Expect = 6.570e-70 Identity = 108/149 (72.48%), Postives = 126/149 (84.56%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDYEGSCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLEFRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSPTHPSYP+GHA QNGA+ATVLKAL+GLDRG +CF NPVF DDGLE +++EG+CLTYEGEINKLA N++FGRQMLG+HYR D GL+LGET+ +RTLHQELM F E EFR+FTGEVI LF DGTFSIDG C+G VYTGV++C
Sbjct: 526 GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGECFPNPVFPSDDGLELINFEGACLTYEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEEATFEFRLFTGEVIKLFQDGTFSIDGDMCSGLVYTGVADC 674
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 226 bits (577), Expect = 5.480e-68 Identity = 104/149 (69.80%), Postives = 122/149 (81.88%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDYEGSCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLEFRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSPTHPSYP+GHA QNGA+ATVLKAL+GLDRG C+ +PV+ DDDGL+ +D+ GSCLT+EGEINKLA N++FGRQMLG+HYR D GL+LGET+ +RTLHQELM F E EFR+FTGEVI LF DGTF+IDG C G VYTGV C
Sbjct: 407 GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEESTFEFRLFTGEVIKLFQDGTFTIDGFKCPGLVYTGVENC 555
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 191 bits (484), Expect = 8.140e-54 Identity = 94/153 (61.44%), Postives = 114/153 (74.51%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDYEG----SCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLEFRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSPTHPSYPAGHA QNGA+ATVLKALVGL+RGS CF +PVF DD+GL L Y G +CLT+EGEINKLA N++ GR MLGVH+R+DS GL+LGET A+R L QE + +PE EFR+ +G+ I L DGTF ID T C+G+ + G C
Sbjct: 472 GSPTHPSYPAGHATQNGAFATVLKALVGLERGSVCFNDPVFPDDEGLTLLPYTGDDGNNCLTFEGEINKLAVNVALGRNMLGVHWRIDSELGLLLGETAAVRILQQEAVAYPENAGYEFRLMSGKTIRLETDGTFFIDDTLCSGDAFMGADLC 624
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 188 bits (478), Expect = 5.100e-53 Identity = 90/149 (60.40%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDYEGSCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLEFRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSPTHPSYPAGHA QNGA+ATVLKALVGL+RGS CF +P DD+GL LD+ G CLT+EGEINKLA N++FGR M GVH+R+DS GL+LGE A+R L QE + FPE EF + +GE I L DGTF I+ C+G+ + G C
Sbjct: 465 GSPTHPSYPAGHATQNGAFATVLKALVGLERGSDCFRDPKVPDDEGLTLLDFTGDCLTFEGEINKLAVNVAFGRNMCGVHWRIDSEQGLLLGEMAAVRILQQEAVTFPENAGYEFNLMSGETIRLETDGTFFINDRLCSGDAFMGADLC 613
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 164 bits (415), Expect = 8.620e-44 Identity = 78/121 (64.46%), Postives = 98/121 (80.99%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDYEGSCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLEFRIFTGE 363
GSPTHPSYP+GHAVQNGA++T+LKALVGL+RG +CF +PV DDGL L ++G CLT+EGEINK AAN++ GR +GVH+RMD+ GL+LGETVA+R L QEL FPE + EFR+ +GE
Sbjct: 454 GSPTHPSYPSGHAVQNGAFSTILKALVGLERGLECFNDPVVPSDDGLTLLPFDG-CLTFEGEINKYAANVALGRNWMGVHWRMDAQEGLLLGETVAVRILMQELAGFPELEPYEFRVMSGE 573
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE) HSP 1 Score: 144 bits (364), Expect = 1.480e-36 Identity = 75/180 (41.67%), Postives = 106/180 (58.89%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDYE-------GSC----------LTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLE--------------FRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSPTHP+YP+GHA+ NGAY T LKA +G + G KCF NPV S+D+G +R+ Y+ G C LTYEGE+NK++AN+ GR +GVH+RMD +G ++GET +R L QEL PE +E FR+++G+++ L+ + +DG C G +TG C
Sbjct: 475 GSPTHPAYPSGHAINNGAYITALKAFLGYEAGQKCFPNPVVSNDEGTKRIKYKPSGREIVGECVNEKGKLVEGLTYEGELNKISANVLLGRSHIGVHWRMDGVYGALMGETSCVRRLQQELPGLPEAREVEGKKRRGDIPPATYKFRLYSGKILELYGRNLYKLDGKLCEG-AFTGDDFC 653
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: B7ZGM5_9PHAE (Putative vanadium-dependent bromoperoxidase 7 (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM5_9PHAE) HSP 1 Score: 137 bits (345), Expect = 5.570e-35 Identity = 75/179 (41.90%), Postives = 101/179 (56.42%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDY-----------------EGSCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLE-------------FRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSP HP+YP+GHA+ G Y T LKA VG + G KCF NPV SDD GL R+ Y + + LT EGE+NK+A+N+ GR LGVH+RMD +G ++GET A+R L QEL PE ++ FR+++G+++ +F F +DG C G YTG C
Sbjct: 224 GSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCFPNPVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVYGALMGETSAVRRLQQELSGLPEARVVDGARSDDIPPATYKFRLYSGKMLEIFSVTLFRLDGQLCKG-AYTGDDFC 401
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 132 bits (332), Expect = 3.130e-32 Identity = 74/175 (42.29%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERL-------DYEGSC----------LTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLE---------FRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSP HP+YP+GHA+ GAY TVLKA +G + G +CF +P+ S+D G +R+ D G+C LTYEGE+NK+ +N++ GR LGVH+RMD G +GE AIR L QEL PE E FR+++G +I LFPD + + C G +TG C
Sbjct: 441 GSPVHPAYPSGHAINLGAYLTVLKAFLGFELGQRCFPSPMISNDAGTDRIPFVPSDGDRVGTCINEDGEEEVGLTYEGELNKVTSNVAIGRSHLGVHWRMDGVFGAEMGEAGAIRRLQQELGGLPEARDTEGPIPPASYKFRLYSGTMIELFPDNRYMLGDQMCKG-FFTGDDFC 614
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI) HSP 1 Score: 131 bits (329), Expect = 8.120e-32 Identity = 72/173 (41.62%), Postives = 101/173 (58.38%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENP-VFSDDDGLERLDY--------------EGSCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYD---------FLEFRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSP HP+YP+GHA+ GAY T LKA +G + G +C+ V S+D+G +R++Y E LTYEGE+NK+A+N+ GR +GVHYRMD +G ++GET A+R L QEL E +FR+++G+V+ L F +DG TC G +YTG C
Sbjct: 445 GSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLGDLVVSNDEGTKRIEYVPRKGETCIDQNGREVQGLTYEGELNKVASNVIIGRSHIGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARDTKGSIPPASYKFRLYSGKVLELLAKDIFKLDGRTCKG-LYTGDDFC 616
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Match: B7ZGM1_9PHAE (Putative vanadium-dependent bromoperoxidase 3 n=4 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM1_9PHAE) HSP 1 Score: 130 bits (328), Expect = 1.130e-31 Identity = 73/179 (40.78%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 1 GSPTHPSYPAGHAVQNGAYATVLKALVGLDRGSKCFENPVFSDDDGLERLDY-----------------EGSCLTYEGEINKLAANISFGRQMLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLE-------------FRIFTGEVIILFPDGTFSIDGTTCNGEVYTGVSEC 447
GSP HP+YP+GHA+ G Y T LKA VG + G KCF N V SDD GL R+ Y + + LT EGE+NK+A+N+ GR LGVH+RMD G ++GET A+R L QEL PE ++ FR+++G+++ +F + +DG C G YTG C
Sbjct: 441 GSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCFPNLVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVSGALMGETSAVRRLQQELSGLPEARVVDGARSDDIPPATYKFRLYSGKMLEIFGVTLYRLDGQLCKG-AYTGDDFC 618 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1473.3285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1473.3285.1 >prot_F-serratus_M_contig1473.3285.1 ID=prot_F-serratus_M_contig1473.3285.1|Name=mRNA_F-serratus_M_contig1473.3285.1|organism=Fucus serratus male|type=polypeptide|length=75bp MLGVHYRMDSTHGLILGETVAIRTLHQELMFFPEYDFLEFRIFTGEVIILback to top mRNA from alignment at F-serratus_M_contig1473:69556..71689+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1473.3285.1 ID=mRNA_F-serratus_M_contig1473.3285.1|Name=mRNA_F-serratus_M_contig1473.3285.1|organism=Fucus serratus male|type=mRNA|length=2134bp|location=Sequence derived from alignment at F-serratus_M_contig1473:69556..71689+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1473:69556..71689+ >mRNA_F-serratus_M_contig1473.3285.1 ID=mRNA_F-serratus_M_contig1473.3285.1|Name=mRNA_F-serratus_M_contig1473.3285.1|organism=Fucus serratus male|type=CDS|length=450bp|location=Sequence derived from alignment at F-serratus_M_contig1473:69556..71689+ (Fucus serratus male)back to top |