mRNA_F-serratus_M_contig146.3244.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.120e-42 Identity = 79/175 (45.14%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 1 QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
QV A L +L R + ++ +S +S V + FC +L+ +V LP G+DL+ VM++Y + GFPGA+GS DVTH+ W P +A + GKEGKPT+AFQV VD + RVLA T GF GA ND TI R+D+ + IRT YT Q ++LY +G + G YLL D GY
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGY 257
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 154 bits (389), Expect = 2.150e-41 Identity = 78/175 (44.57%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 1 QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
+V A L +L R + ++ +S +S V + FC +L+ +V LP G+DL+ VM++Y + GFPGA+GS DVTH+ W P +A + GKEGKPT+AFQV VD + RVLA T GF GA ND TI R+D+ + IRT YT Q ++LY +G + G YLL D GY
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGY 348
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 144 bits (362), Expect = 9.400e-38 Identity = 74/177 (41.81%), Postives = 103/177 (58.19%), Query Frame = 1
Query: 1 QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRLP--EGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
+V A L +LGR +G++ LS MS V+ FC +++ H+ LP E +L VM +Y K GFPGA+GS DVTH+ W R P + + GKEGKPT+ +QV V+ RVLA T+GF G+ ND TI DE + IRT + Y + F ++ +G +T G YL+ D GY
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 303
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 144 bits (363), Expect = 2.040e-37 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 1
Query: 1 QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
+V L VLGR + +V S MS T S FC L +RLPEG+ L+ V Y G+PGA+GSID THV W+R +E T H GKEG T+ F+ I D R+LA+T G+ GAEND T+ + D ++ + ++P+ + +E+YD G+ G +L+ DGGY
Sbjct: 210 KVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGY 384
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 136 bits (342), Expect = 3.210e-36 Identity = 62/152 (40.79%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 70 MSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
MS T S FC L +RLPEG+DL+ V Y G+PGA+GSID THV W+R +E T H GKEG T+ F+ I D R+LA+T G+ GAEND T+ + D ++ + ++P+ + +E+YD G+ G +L+ +GGY
Sbjct: 1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGY 152
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.240e-35 Identity = 69/175 (39.43%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 1 QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
+V L VLGR + +V LS MS S FC L H V LPEG+ LK V Y G PGA+ S+D TH+ W P +E H GKEG TL ++ D + R+L++T GF GAEND T+ + D ++ +R ++P+ + F L+D GN G +L+ DGGY
Sbjct: 112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGY 286
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 135 bits (341), Expect = 4.850e-35 Identity = 68/177 (38.42%), Postives = 102/177 (57.63%), Query Frame = 1
Query: 1 QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRLP--EGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
+V A L +LGR + ++ +S MS V+ FC +++ H+ LP + +L VMK+Y + GF GA+GS+DVTH++W++ P + GKEG PT+ +QV V+ R A T+GF G+ ND TI D + IRT + YT + F++Y+ +G T G YLL D GY
Sbjct: 125 KVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY 301
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5KW69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW69_9PHAE) HSP 1 Score: 128 bits (321), Expect = 4.240e-34 Identity = 62/152 (40.79%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 70 MSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
MS S FC K L V+LP GD+LK+V + + K G+PGAIGS D TH W P++EA + GKEG PT+ + D T R++A T + G+ ND TI + D++I IR ++P+++ ++LY+A+G++ GA+L+ DGGY
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSANDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGY 152
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.210e-34 Identity = 70/175 (40.00%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 1 QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
QV L LGR + +V S MS T S FC L +RLPEG+DL+ V Y G+PGA+GSID THV W+R +E T H GKEG T+ F+ I D R+LA+T G+ GAEND +T+ I + +E+YD G+ G +L+ DGGY
Sbjct: 5 QVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAEND-------KTVVIYK---------YEMYDETGDVTKHTGGWLIADGGY 163
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Match: A0A6H5K1K5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K5_9PHAE) HSP 1 Score: 127 bits (318), Expect = 5.960e-34 Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 70 MSETAVRDSLITFCTKAVDDLHHVHVRLPEGDDLKDVMKRYSKKGFPGAIGSIDVTHVLWDRVPAAEATDHAGKEGKPTLAFQVIVDFTRRVLANTDGFAGAENDMTISRHDETIGIIRTQQPYTTQAFELYDANGNKQTRHGAYLLCDGGY 525
MS S FC K L V+LP GD+LK+V + + K G+PGAIGS D TH W P++EA + GKEG PT+ + D T ++A T + G+END +I + D++I IR ++P+++ ++LY+A+G++ GA+L+ DGGY
Sbjct: 1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGHIIAATKSYPGSENDKSIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGY 152 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig146.3244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig146.3244.1 >prot_F-serratus_M_contig146.3244.1 ID=prot_F-serratus_M_contig146.3244.1|Name=mRNA_F-serratus_M_contig146.3244.1|organism=Fucus serratus male|type=polypeptide|length=175bp QVKASLYVLGRACGYGNVGMLSGMSETAVRDSLITFCTKAVDDLHHVHVRback to top mRNA from alignment at F-serratus_M_contig146:5025..5549- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig146.3244.1 ID=mRNA_F-serratus_M_contig146.3244.1|Name=mRNA_F-serratus_M_contig146.3244.1|organism=Fucus serratus male|type=mRNA|length=525bp|location=Sequence derived from alignment at F-serratus_M_contig146:5025..5549- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig146:5025..5549- >mRNA_F-serratus_M_contig146.3244.1 ID=mRNA_F-serratus_M_contig146.3244.1|Name=mRNA_F-serratus_M_contig146.3244.1|organism=Fucus serratus male|type=CDS|length=1050bp|location=Sequence derived from alignment at F-serratus_M_contig146:5025..5549- (Fucus serratus male)back to top |