mRNA_F-serratus_M_contig145.3182.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: D7FRT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRT0_ECTSI) HSP 1 Score: 427 bits (1099), Expect = 2.160e-147 Identity = 214/311 (68.81%), Postives = 244/311 (78.46%), Query Frame = 1
Query: 46 LLVFLGLVGIDAFTLHSSSALRIRRVHDRTSPSLKATRCRRGGAS--------------MGTEFEDENAKEKLKAMLNRQFGIGDSSRPEEWCKATETIEAGTVLLADPSSFTGKGDPKVLEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTMGVMLNRRTGVLMGDLGEDFKSFMIQPLWLGGTQGEKSLSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDGPGSSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFYRR 936
LLV G +G++AFT SS LR +S S AT G + MGTEFEDENAKEKLKAMLNRQFGIGD+SRP+EWCK T+ ++ GTVLLADP +FT + PK+L+KFG+A+PLPGS+QI PDRAADL+PVVLLV + T+G+MLNRRTGVLMGDLG DF SFMIQPLWLGGTQGE ++FIHTYPEV GAQ I ++GLYF+G MESAS+VVTDGPGS FNFRFF Q T+W GELEAEV+RGLWRP +ASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYL MEEFYRR
Sbjct: 4 LLVCFGSIGVEAFTTSSSLGLRA------SSASFAATGLPAGAVASRSTSWRNNKIRPRMGTEFEDENAKEKLKAMLNRQFGIGDTSRPDEWCKPTDVLQTGTVLLADPKAFTTRSHPKMLDKFGLAQPLPGSEQIPPDRAADLLPVVLLVGIDAGRTIGLMLNRRTGVLMGDLGNDFTSFMIQPLWLGGTQGENGITFIHTYPEVEGAQAISEEEGLYFSGNMESASKVVTDGPGSGFNFRFFAQITVWKAGELEAEVDRGLWRPVVASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLAAMEEFYRR 308
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A835YZZ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZZ3_9STRA) HSP 1 Score: 282 bits (721), Expect = 5.630e-90 Identity = 144/239 (60.25%), Postives = 174/239 (72.80%), Query Frame = 1
Query: 190 EFEDENAKEKLKAMLNRQFGIGDSS-RPEEWCKATETIEAGTVLLADPSSFTGKGDPKVLEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTMGVMLNRRTGVLMGDLGEDFKSFMIQPLWLGGTQGEKSLSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDGPGSSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGE 903
E+ DE A+ KL+ MLN+QFG G + + +EW K + I GTVLLADP F KGD K L++FG+ P+P ISPDR ADL+P +LLV G +G++GVMLNRRTG+LMGDLGED +FMIQP++LGGT G +SLSFIHTYPEVA A+ + D GL+F G+ +SA V +G GS FNFRFFVQ+T W PGEL AEV G W A KM+LLRVRDRKGPD AKPMW DL MAG E
Sbjct: 69 EYMDEEAQRKLRDMLNKQFGKGAGTVKADEWAKPADAIGVGTVLLADPRPFF-KGDAKTLQRFGLPEPIP--QVISPDRQADLLPCILLVQHGPRGSIGVMLNRRTGMLMGDLGEDMSAFMIQPIFLGGTLGSQSLSFIHTYPEVAQAEQVTED-GLFFGGDFKSAVHCVREGIGSGFNFRFFVQYTQWGPGELGAEVNAGRWHAVSAGKMSLLRVRDRKGPDTAKPMWTDLLTMAGEE 303
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A4D9D9B7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9B7_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.210e-47 Identity = 91/242 (37.60%), Postives = 134/242 (55.37%), Query Frame = 1
Query: 229 MLNRQFGIGDSSRPEEWCKATETIEAGTVLLADPSSFTGKGDPKVLEKF--------GMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTMGVMLNRRTGVLMGDLGEDFKSFMIQPLWLGGTQGEKSLSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDGPGSSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFY 930
M Q S +W + + G VL+A+P+ F + +F G+ G Q + D A+++PVVLL+ G GT G++LNRRTG L+GDL D F IQP+ LGGT + +HTYPE+ A + D GL+F G +A +V + SS F+FF+Q TLW+PGEL+ E+E +W PA SK +L+ R R+GP +AKP+W ++ ++ GG +L +E Y
Sbjct: 73 MQGAQQRRASSGEGGDWAVYSSALRGGVVLVANPAVFLAGPPAGLASRFLLPSDLSLGLFSSFGGESQQAIDNLANILPVVLLLGSGSGGTSGLVLNRRTGYLVGDLNVDSSGFKIQPVHLGGTGESDGIFMVHTYPELERATQVTND-GLFFGGNYTAAQELVREQGASSSRFKFFIQQTLWAPGELKREIEDKVWYPAQVSKDVILKNRGREGPKMAKPLWTEVLELMGGSFLEIKKELY 313
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A7S2B470_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B470_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.290e-45 Identity = 80/169 (47.34%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 427 ADLMPVVLLVDVGD-KGTMGVMLNRRTGVLMGDLGEDFKSFMIQPLWLGGTQGEKSLSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDGPGSSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFY 930
A+LMPV+++ + +G MG+MLNRRTG LMGDL +D FMIQPL GGTQ LSF+H YPE+ G+ I G+ GLY++G + A +V G S F FRFF+Q W GELE ++ + W PA SK +L++R+R+G KP+W D+ +AGG Y E+FY
Sbjct: 1 ANLMPVIIVTSGSESEGYMGLMLNRRTGYLMGDLEQDVSGFMIQPLNFGGTQPPADLSFLHPYPEIGGSTQI-GEDGLYYSGNFKDAQMLVEKGTCSQFKFRFFIQCVRWEKGELEKQMAKNTWCPAQVSKDVILKIREREGSRRPKPLWTDVMDLAGGNYGELSEDFY 168
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A7S1UHR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHR3_9STRA) HSP 1 Score: 155 bits (393), Expect = 4.160e-41 Identity = 90/230 (39.13%), Postives = 128/230 (55.65%), Query Frame = 1
Query: 175 ASMGTEFEDENAKEKLKA---MLNRQFGIGDSSRPEEWCKATETIEAGTVLLADPSSFTGKGDPKVLEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTMGVMLNRRTGVLMGDLGED--FKSFMIQPLWLGGTQGEKSLSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDGPGSSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKG 849
A E + + +EKL A +R ++ EW + G +L+A+P +F DP K+G+ PG + PDR A+L+PVV+L GD + G +LNRRTG++MGDL E + F +QP+W GG GE LS +HTYP+V GA+ I GL+ G E+A VT+G S +NF+FF+Q W G LE EV RG W PA S ++++R+R G
Sbjct: 83 APASAEDDVASFREKLLAGAMEFDRVTEAQNTPEATEWVQPCGGPVGGGLLIANPDAFFE--DPMFQGKYGVQGFAPGD--LPPDRLAELLPVVMLYMHGDLQSAGFVLNRRTGMMMGDLAEQHGLRCFQVQPIWYGGPHGEGQLSMVHTYPQVEGARKI--SDGLWLGGSFEAAQDEVTEGIASGWNFKFFLQVDAWGAGSLEDEVRRGWWLPARCSPQVVMKIRERGG 306
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: B7G772_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G772_PHATC) HSP 1 Score: 152 bits (384), Expect = 5.650e-39 Identity = 94/249 (37.75%), Postives = 135/249 (54.22%), Query Frame = 1
Query: 274 EWCKATETIEAGTVLLADPSSFT---GKG-----DPKVLEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTM-GVMLNRRTGVLMGDLGED----------------FKSFMIQPLWLGGTQGEKS-LSFIHTYPEVAGAQPILGDQGLYFAGE---MESASRVVTDGPGSSFNFRFFVQFTLW-SPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFY 930
+W + +I+ G VLLA+P F G G PK+L KFG+ P P + PDR ADL+PV+++V+ G+ + V+LNRRTG L+GDL + + F IQPLW GG + L +H P V A+P L D+GLY+ G+ + A VTD + F+F+FFVQ T+W S EL+ E++ G W A SK L + RDR G AKP+W ++ ++ GG+Y + Y
Sbjct: 141 DWSEPVSSIQKGMVLLANPEQFCSDFGGGRRKMPSPKLLAKFGLTLPPPAD--LGPDRRADLLPVLIVVECGEGSRVRAVLLNRRTGYLLGDLEQADTNLGSTSSKKAPTPVLEKFCIQPLWFGGVDNVSAGLDMLHQCPTVPDAEP-LSDEGLYWGGDPALAQDAMDEVTDKVLTGFDFKFFVQSTVWGSSKELQKEIDNGTWFTARVSKEVLFKSRDRMGTRRAKPLWTEVMELLGGKYKDTRDMLY 386
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A1E7FXR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXR6_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.040e-38 Identity = 104/304 (34.21%), Postives = 138/304 (45.39%), Query Frame = 1
Query: 172 GASMGTEFEDENAKEKLKAMLNRQFGIGDSSRPEEWCKATETIEAGTVLLADPSSF---------------------------TGKGDPKVLEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTMGVMLNRRTGVLMGDL---GEDFKS---------------FMIQPLWLGGTQG-EKSLSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDGPG-----SSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFY 930
G S G+ D++ KE + E+W K E I GTVL+A+P F + K DP +L KFG+ +P P + DR ADL+PVV++V GV+LNRRTG L+GDL ED S F IQPLW GG L +H P V AQ I D G+Y+ G+ A + D P S F+F+FFVQ T+WS G L+ EV+ +W A S L + RDR G AKP+W ++ + G EY + FY
Sbjct: 40 GVSTGSGIADDDDKETI---------------VEDWAKPMEGIRPGTVLIANPRKFCEDGDFGDSGSDDNESTGVKDFLKFGWSSKPDPSLLAKFGLTQPPPR--HLGADRQADLLPVVIVVSTDGGQIQGVLLNRRTGYLLGDLEQPAEDGSSDDNNDNNDMAPILEKFCIQPLWFGGIDSLSVGLDMLHLCPTVNDAQQITED-GMYWGGDPTQAQDAMED-PSLDRIYSGFDFKFFVQSTIWSSGVLQGEVDDNIWFQANVSNNVLFKSRDRMGTKKAKPLWTEILDLMGDEYSDITKRFY 324
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A7S4AE40_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AE40_9STRA) HSP 1 Score: 151 bits (381), Expect = 4.110e-38 Identity = 109/306 (35.62%), Postives = 149/306 (48.69%), Query Frame = 1
Query: 172 GASMGTEFE-DENAKEKLKAMLNRQFGIGDSSRPEEWCKATETIEAGTVLLADPSSFTGKGD-----------------------------PKVLEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTMGVMLNRRTGVLMGDL---------GED-------FKSFMIQPLWLGGTQG-EKSLSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDGPG-----SSFNFRFFVQFTLWSP-GELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFY 930
G MGT E E A+++ +A + D + PE+W K T I GTVL+A+PS F +GD P +L KFG+ +P P + DR ADL+PVV++V GV+LNRRTG L+GDL GE+ + F IQPLW GG L +H P V A I D +Y+ G+ A + D P S F+F+FFVQ T+WS G L++EV+ +W PA S+ L + RDR G AKP+WA++ + G +Y ME FY
Sbjct: 139 GEGMGTIDELIEYARKQQQAEESPTVADTDVA-PEDWAKETSEIRPGTVLVANPSKFCDEGDYGRMSGDDNEPSGGGKDFFAAALGRTGPAPSLLAKFGLTQPPPR--HLGADRQADLLPVVIVVGTEGGQVQGVLLNRRTGYLLGDLEQPSADGSSGENNEDMAPILEKFCIQPLWFGGIDSLSVGLDMLHLCPTVRDATKITEDN-VYWGGDPAQAQDAMED-PSLDRMYSGFDFKFFVQSTIWSNVGTLQSEVDDKIWFPAKVSQKILFKSRDRMGTKKAKPLWAEIMGLMGDKYSVVMENFY 439
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A1Z5J7Y0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7Y0_FISSO) HSP 1 Score: 148 bits (373), Expect = 1.370e-37 Identity = 94/275 (34.18%), Postives = 146/275 (53.09%), Query Frame = 1
Query: 181 MGTEFEDENAKEKLKAMLNRQFGIGDSSRPE---EWCKATETIEAGTVLLADPSSFTGK--GDPKV-----LEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGD-KGTMGVMLNRRTGVLMGDLGEDFKS---------FMIQPLWLGGTQGEKS-LSFIHTYPEVAGAQPILGDQGLYFAGEMESASRVVTDG----PGSSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFY 930
M + F+ E +K ++ G+ S + +W +A +T+ GT+LLA+P F G+ +V + +FG++ P P ++ PDR ADL+PV+L+VD KGT ++LNRRTG L+GDL + F IQPLW GG + L +H P V GA+ + D GL++ G+ A + D P S F+F+FFVQ T+++PG+ E EV + A S + + RDR G AKP+W ++ ++ GG+Y + Y
Sbjct: 88 MSSMFQTEESK-----GVDELIGLATSKSQQTSKDWARAADTVAPGTILLANPDYFCANFNGNRRVPSSDLMARFGLSLPPPL--ELGPDRRADLLPVLLVVDSSKTKGTRAILLNRRTGHLLGDLEQPLDEGGSSPLLAKFCIQPLWFGGVDSYSAGLEMVHLCPAVRGAKQLTED-GLFWGGDPTEAQDAMEDPSLERPMSGFDFKFFVQSTIFAPGQAEKEVASSTFFLANVSTDVIFKSRDRMGTKRAKPLWTEIMELMGGKYEATKNKLY 354
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Match: A0A7S2DJT8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJT8_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.680e-37 Identity = 82/240 (34.17%), Postives = 133/240 (55.42%), Query Frame = 1
Query: 268 PEEWCKATE---TIEAGTVLLADPSSFTGKGDPK-VLEKFGMARPLPGSDQISPDRAADLMPVVLLVDVGDKGTMGVMLNRRTGVLMGDLGE-DFKSFMIQPLWLGGTQGEKS-LSFIHTYPEVAGAQPIL-------------GDQGLYFAGEMESASRVVTDGPGSSFNFRFFVQFTLWSPGELEAEVERGLWRPAIASKMALLRVRDRKGPDVAKPMWADLSQMAGGEYLRKMEEFY 930
P W K + G V+L +P F + P+ +L +FG+ +P+P ++ + P+ A+L+PV+LLV+ + G++LNRRTG LMG+L + D F +QPL LGG E S LS+IH Y E++G + + G+ L+ G + A +V + F F+FF T W PG+LE +++ + PA S LL++R+R+G A P+W ++ ++AGG Y ++FY
Sbjct: 121 PSYWSKTVAIEGALRPGLVVLGNPKLFCNEEAPEEMLMQFGLRQPVPNAEDLDPNSRANLLPVILLVETDNGPAKGLLLNRRTGYLMGELKDKDVSGFRVQPLNLGGMADEASDLSYIHPYAELSGCEGLSSDYDNDNAGDRKEGESSLFLGGNFKEAQDMVQEEIFDGFKFKFFGGCTRWEPGQLEQQLKDQVLLPAECSADLLLKIREREGDKRATPLWTEIMELAGGAYADICKDFY 360 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig145.3182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig145.3182.1 >prot_F-serratus_M_contig145.3182.1 ID=prot_F-serratus_M_contig145.3182.1|Name=mRNA_F-serratus_M_contig145.3182.1|organism=Fucus serratus male|type=polypeptide|length=301bp MRGLLVFLGLVGIDAFTLHSSSALRIRRVHDRTSPSLKATRCRRGGASMGback to top mRNA from alignment at F-serratus_M_contig145:201316..212468- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig145.3182.1 ID=mRNA_F-serratus_M_contig145.3182.1|Name=mRNA_F-serratus_M_contig145.3182.1|organism=Fucus serratus male|type=mRNA|length=11153bp|location=Sequence derived from alignment at F-serratus_M_contig145:201316..212468- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig145:201316..212468- >mRNA_F-serratus_M_contig145.3182.1 ID=mRNA_F-serratus_M_contig145.3182.1|Name=mRNA_F-serratus_M_contig145.3182.1|organism=Fucus serratus male|type=CDS|length=1806bp|location=Sequence derived from alignment at F-serratus_M_contig145:201316..212468- (Fucus serratus male)back to top |