mRNA_F-serratus_M_contig1437.3122.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1437.3122.1
Unique NamemRNA_F-serratus_M_contig1437.3122.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 9.070e-33
Identity = 105/302 (34.77%), Postives = 154/302 (50.99%), Query Frame = 1
Query:  298 ADLRAATRGAIMAG--DTGFVRHLLLQRE--TFVGAKPKLMKDLHLAVKLGNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAF 1167
            A +R A + A+ +G  D   V+ +L+  +  + +         LH++   G E  V  LL  GA  N LD++GRTPL                    D  + +   N   +  L FAA+ G   V+RA+++ G+DVN+    G T+LH AA+ N+  +I++LVE GA +E    +     T    +    C++A  AL +HGA+++AR+  G TPL   ARQAGR G   I D+LL  G        DG    ++  V  +         + ++ER+R L E APADRAWRRRG+LVLCRAF
Sbjct:   48 ASMRVALKEAVDSGHVDESAVKPILVMAKVASLLSESVDSSDQLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNR-SYSVLDFAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDD---DCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEV--VGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAF 342          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 2.240e-31
Identity = 96/260 (36.92%), Postives = 134/260 (51.54%), Query Frame = 1
Query:  412 DLHLAVKLGNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAF 1167
             LH+A   G E  V  LL  GA  N LD++GRTPL                    D  + +   N   +  L  AA+ G   V+RA+++ G+DVN+    G T+LH AA+ N+  +I++LVE GA +E    +     T    + +  C++A  AL +HG++++AR+  G TPL   ARQAGR G   I D+LL  G        DG    ++  V  +         + +VER+R L E AP DRAWRRRG LVLCRAF
Sbjct:   41 QLHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNR-SYSVLDLAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDD---DCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEV--VGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAF 293          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.340e-22
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1
Query:  613 EHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAAL---LRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLL--------TRGDGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPRDA 1203
            E  AL   A  GH D +R LI+ G DV+  N  G+ ALH+A   N+  ++++L+  GA+  + +SE+  G T LH +A+ R     A L   L+HGA V A+   G + L  VA +AG+ G +E+ DLLL          G+G    D + +     E+D   EE   E +RKL   APADRAWRRR  LVLCRA P++++L   R A
Sbjct:  160 EISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARS-MSES--GHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVP--EEDRIPEE--FEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRIA 360          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 6.170e-22
Identity = 82/188 (43.62%), Postives = 109/188 (57.98%), Query Frame = 1
Query:  682 GLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRA-FPE-RVRLGRPRDAAHAV 1215
            G DVN   + G+TAL  A+  ++  +I++L E GA+IEA+ +    G T LH ++      A  ALLRHGASV  +NA   TPLH VA +AG  G  E+ DLLL RG        +GH   D++ +     E DS  E+  V+R+RKL  +APADRAWRRRG L+L RA +P  RV+ G     A A 
Sbjct:  547 GGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQAN----GSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTE--ESDSLAED--VDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAA 726          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.250e-20
Identity = 95/286 (33.22%), Postives = 134/286 (46.85%), Query Frame = 1
Query:  625 LSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATA-ALLRHGASVKARNA-FGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRA---WRRRGILVLCRAFPERVRLGRPRDAAHAVEAPVGKEGGSSCTTLDRAQESGRTVFYSEVSEYNGGQKRSAPGPATTAAEDFFCRAVINTLTLAEDGIFRRIVAFL 1443
            L  + R    D+ R ++++G    +++S G TALH+A       +I++LV  GA++EA+++ A    T LH +A      A   AL RHGA V A+    G TPLH  A+    + + E  D LL  G         G  PLD+++  R    D      N  ER R +   AP DRA   W RR   V+CRA P+RVRL    D                 TT  RA+++      +  S   G  + SA         D F RA+ + + L EDG+FR+IVAFL
Sbjct:   19 LDCSVRSDGMDLTRQVLQRGAIATESSSDGCTALHWAGWNMNASAIDLLVGAGANLEAKIA-ADAEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEA-RIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLTVVDDT----------------TTSPRAKKTMAAAATAVGSGRRGANRDSA---------DNFQRAMRSLIRLKEDGLFRKIVAFL 277          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 4.420e-14
Identity = 71/194 (36.60%), Postives = 89/194 (45.88%), Query Frame = 1
Query:  625 LSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGG--------TALHASAVMRCYDAT--AALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRGDGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPER 1176
            L  A       + RAL+K G DV   +  G TALH+AA R +P  IE LV  GAD+EAR S+    G        T LH +A  R  +    A LL+ GA V A +  G TPLH VA     D +    D                           T  ++ E +++L  +APADRAWRRRG LVL R   ER
Sbjct:  244 LQLACSSREAAMTRALLKHGADVKSCDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMALLLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXX---VVTRSSSAEPLKRLLRRAPADRAWRRRGPLVLSRVRAER 434          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.510e-14
Identity = 117/338 (34.62%), Postives = 161/338 (47.63%), Query Frame = 1
Query:  241 SNGEPLRERSANLGGGKNEADLRAATRGAIMAGDTGFVRHLLLQRETFVGAKPKLMKDLHLAVKLGNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADM------GIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNK--ANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGG---GTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPR 1197
            S  E L  R  + GG  N  D    +   I AG        +  R+   G  P     LH AV+ G + +V  LL  GA  N  D       XXXXXXXXXXXXXXXXXXXA+       G +      + +  ++ A ++GH  V++A ++ G+D +     + G TALH AA+ NQ  ++E+L+E GAD +  V    G     T L A+A     +A   LLR+GA     +  G  PLH  A +    G +E+ DLLL  G         G+ P ++      +  D   TEE     +  L  +APADRAWRRRG +V+ RA  E  R+   R
Sbjct:   48 SGNEDLVTRLLDTGGDVNRLDHLGRSTTLISAGAD------VNDRDPAEGCYP-----LHAAVRRGCDRVVADLLAAGAAPNNTDGXXXXXXXXXXXXXXXXXXXXXXXXXAEFTFESCAGYVVIASEVFPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADAD--VESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQ-TPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPD--ATEERAGALV--LLARAPADRAWRRRGWVVMLRARSETERIAAQR 367          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 6.890e-14
Identity = 101/348 (29.02%), Postives = 143/348 (41.09%), Query Frame = 1
Query:  436 GNEPIVTLLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHC------ALSFAARMGHEDVMRALI-KQGLDVNKANSRGLTALHYAAVRNQPRSI-EILVENGADIEARVSEAGGGG----TALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRGDGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPRDAAHAVEAPVGKEGGSSCTTLDRAQESGRTVFYSEVSEYNGGQKRSAPGPATTAAEDFFCRAVINTLTLAEDGIFRRIVAFL 1443
            G   IV  LL  GA  ++  + GRTPL                   AD+ +      + ++C      AL FA   GH  V+ AL+ K GL+++  ++ G TALH A +  +   I E L+  GAD + R++  G       TA H+   +  Y     L+ HGA V +R  FG TPLH     +  D  L    LLL  G         D N  N++ D+         +R+L     ADRAWRRRG LV+ R     ++ G    AA A  A   + GGS                        GG+            E F     +  L + E+G+FR +V+FL
Sbjct:  131 GYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTLAAHGLTDEDYCLGDNCTALHFATAGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPLHHACDYSQSDAVLR---LLLQAG--------ADENALNDDGDTPG-------VRELL----ADRAWRRRGWLVMLRL--RTLKAGGDGGAAGARSAK--QRGGSG-----------------------GGE------------ESFNLSEAVEWLGVVEEGVFRNVVSFL 417          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 8.890e-14
Identity = 56/148 (37.84%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  457 LLLRHGAGVNALDSRGRTPLXXXXXXXXXXXXXXXXXXXADMGIIFTDENNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASV 900
            LLLR GA V+ LD++GRTP+                    D  + +     +   AL  AAR GH +VM+ALI+ G+DV+  +S GLTALH AA  +   +IE L+E GA+I+A+  E G   T LH ++     +A  +L++H A V
Sbjct:  100 LLLRDGAEVDVLDTKGRTPIHLSAKRGSLSAVQALLAAGGDSSLRYGKGEAFS--ALGLAARGGHVEVMQALIRHGVDVDAPDSNGLTALHSAATGDAVGAIETLMEAGANIDAQGGEDGARYTPLHMASEKGLSEAALSLVKHRADV 245          
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 2.310e-13
Identity = 71/219 (32.42%), Postives = 100/219 (45.66%), Query Frame = 1
Query:  604 NNYEHCALSFAARMGHEDVMRALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEAGGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRDGALEIADLLLTRG--------DGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKAPADRAWRRRGILVLCRAFPERVRLGRPRDAAHAVEAPVGKE 1236
            N ++   L FAA     +++R LI  G++VN A + G TALH+AA  N+  +I++LV  GADI+AR     G                                         A+   R G++++  LLL  G         G    D +   R        TE  + ER R L  +APADRAWRRRG+LVLC A+P+R++LG   D A  V+  +G E
Sbjct:  167 NEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQAR--NMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRF-----PSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLG--GDLAGLVDRVLGLE 375          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1437.3122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNU3_9PHAE9.070e-3334.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI2.240e-3136.92Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FKL4_ECTSI1.340e-2239.42Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JHY9_9PHAE6.170e-2243.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0W2_ECTSI1.250e-2033.22Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
D8LH19_ECTSI4.420e-1436.60Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FSI6_ECTSI5.510e-1434.62Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7FVI9_ECTSI6.890e-1429.02Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JN15_9PHAE8.890e-1437.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI2.310e-1332.42Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1437contigF-serratus_M_contig1437:87159..89346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score137.1
Seed ortholog evalue1.8e-29
Seed eggNOG ortholog2880.D7G6X8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1949
Cds size1233
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1437.3122.1prot_F-serratus_M_contig1437.3122.1Fucus serratus malepolypeptideF-serratus_M_contig1437 87877..89133 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929423.0697393-UTR-F-serratus_M_contig1437:87158..876561622929423.0697393-UTR-F-serratus_M_contig1437:87158..87656Fucus serratus maleUTRF-serratus_M_contig1437 87159..87656 -
1690962844.8766441-UTR-F-serratus_M_contig1437:87158..876561690962844.8766441-UTR-F-serratus_M_contig1437:87158..87656Fucus serratus maleUTRF-serratus_M_contig1437 87159..87656 -
1622929423.0855355-UTR-F-serratus_M_contig1437:87871..878761622929423.0855355-UTR-F-serratus_M_contig1437:87871..87876Fucus serratus maleUTRF-serratus_M_contig1437 87872..87876 -
1690962844.8917112-UTR-F-serratus_M_contig1437:87871..878761690962844.8917112-UTR-F-serratus_M_contig1437:87871..87876Fucus serratus maleUTRF-serratus_M_contig1437 87872..87876 -
1622929423.1275291-UTR-F-serratus_M_contig1437:89133..893461622929423.1275291-UTR-F-serratus_M_contig1437:89133..89346Fucus serratus maleUTRF-serratus_M_contig1437 89134..89346 -
1690962844.925636-UTR-F-serratus_M_contig1437:89133..893461690962844.925636-UTR-F-serratus_M_contig1437:89133..89346Fucus serratus maleUTRF-serratus_M_contig1437 89134..89346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929423.099395-CDS-F-serratus_M_contig1437:87876..883201622929423.099395-CDS-F-serratus_M_contig1437:87876..88320Fucus serratus maleCDSF-serratus_M_contig1437 87877..88320 -
1690962844.9022834-CDS-F-serratus_M_contig1437:87876..883201690962844.9022834-CDS-F-serratus_M_contig1437:87876..88320Fucus serratus maleCDSF-serratus_M_contig1437 87877..88320 -
1622929423.1156936-CDS-F-serratus_M_contig1437:88344..891331622929423.1156936-CDS-F-serratus_M_contig1437:88344..89133Fucus serratus maleCDSF-serratus_M_contig1437 88345..89133 -
1690962844.9110413-CDS-F-serratus_M_contig1437:88344..891331690962844.9110413-CDS-F-serratus_M_contig1437:88344..89133Fucus serratus maleCDSF-serratus_M_contig1437 88345..89133 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1437.3122.1

>prot_F-serratus_M_contig1437.3122.1 ID=prot_F-serratus_M_contig1437.3122.1|Name=mRNA_F-serratus_M_contig1437.3122.1|organism=Fucus serratus male|type=polypeptide|length=411bp
MRCLSPLQKSNGEPLRERSANLGGGKNEADLRAATRGAIMAGDTGFVRHL
LLQRETFVGAKPKLMKDLHLAVKLGNEPIVTLLLRHGAGVNALDSRGRTP
LHLACIHGHLSVAIALLEHGADMGIIFTDENNYEHCALSFAARMGHEDVM
RALIKQGLDVNKANSRGLTALHYAAVRNQPRSIEILVENGADIEARVSEA
GGGGTALHASAVMRCYDATAALLRHGASVKARNAFGYTPLHGVARQAGRD
GALEIADLLLTRGDGHLPLDLMDVNRNNNEDDSKTEENNVERMRKLFEKA
PADRAWRRRGILVLCRAFPERVRLGRPRDAAHAVEAPVGKEGGSSCTTLD
RAQESGRTVFYSEVSEYNGGQKRSAPGPATTAAEDFFCRAVINTLTLAED
GIFRRIVAFL*
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mRNA from alignment at F-serratus_M_contig1437:87159..89346-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1437.3122.1 ID=mRNA_F-serratus_M_contig1437.3122.1|Name=mRNA_F-serratus_M_contig1437.3122.1|organism=Fucus serratus male|type=mRNA|length=2188bp|location=Sequence derived from alignment at F-serratus_M_contig1437:87159..89346- (Fucus serratus male)
ACTGACTGGCACTAACAGTTTGTCCCCCTCTATCGCCAGCAACATTCAAA AAGTACTGAGGCAGCGGAAGAAGAGCAGAGCACCTATCTGGATTATCTAC TGTAACGCGACAACCCTGCTGAACATCATCGGATAATCGCTTCGCACTAT AACGAGTAGGCCGCGTGCACCCTCGGAAAAGAGTGAACCTCGTAGACAGG GCGTGGTCTTGTAATGCGGTGCTTGTCTCCGTTACAAAAGTCTAACGGGG AGCCCTTGCGGGAACGGAGTGCTAATCTGGGAGGAGGAAAAAATGAGGCT GACTTACGGGCCGCCACTCGCGGGGCCATCATGGCCGGAGATACGGGATT TGTTCGACACCTCCTGCTTCAGCGGGAAACCTTTGTCGGCGCCAAGCCCA AGTTGATGAAGGATCTCCACCTTGCAGTTAAGCTGGGCAACGAGCCAATC GTGACGCTGCTGTTGAGACACGGAGCGGGGGTCAACGCCCTCGACAGCAG AGGGCGCACCCCGCTTCACCTGGCTTGCATACACGGCCACCTTTCCGTGG CAATCGCTCTCCTGGAACACGGTGCCGATATGGGCATCATATTCACCGAT GAAAACAACTACGAGCACTGCGCACTGAGCTTCGCGGCTCGGATGGGCCA CGAAGACGTAATGAGGGCCTTGATTAAGCAGGGGCTGGACGTGAACAAGG CAAATTCTCGGGGTTTGACAGCACTTCACTACGCCGCGGTCCGCAACCAG CCGCGAAGCATCGAGATTCTGGTCGAGAATGGGGCCGACATCGAAGCCCG CGTTTCTGAAGCCGGAGGTGGGGGGACTGCCCTTCACGCATCTGCTGTGA TGCGCTGCTACGATGCCACGGCGGCCCTCTTGAGGCACGGTGCCAGCGTC AAGGCACGAAACGCGTTCGGGTACACCCCGCTGCACGGAGTTGCGCGGCA GGCGGGGAGGGATGGCGCGCTCGAGATCGCCGACCTCTTGTTGACACGTG GGGCCGACGAAACAGCTGTCGATCAGGATGGCCACCTCCCTCTAGATTTG ATGGATGTCAACAGGAATAATAACGAAGACGACAGCAAAACAGAGGAGAA TAACGTCGAGCGGATGCGCAAGTTGTTTGAAAAGGCACCGGCCGACAGAG CTTGGCGTCGCCGGGGCATCCTTGTTCTCTGCCGCGCTTTCCCAGAAAGA GTGCGTCTAGGGCGCCCAAGAGATGCGGCGCACGCCGTTGAGGCTCCGGT TGGTAAAGAAGGAGGGAGCAGCTGCACCACGTTGGACAGGGCGCAAGAGA GCGGAAGGACGGTTTTTTATAGTGAGGTCAGCGAATACAACGGGGGCCAG AAGCGGTCAGCTCCGGGGCCGGCCACGACGGCTGCTGAAGATTTCTTCTG CAGAGCTGTCATAAACACGCTAACGCTTGCGGAAGATGGCATTTTCCGGA GAATCGTAGCCTTTCTATGAGTCAGGTGCGAGCGAAATGTGAGATTTCCG GTAGCGCCCTCTGTCGTTGCGGTTCGTTTGGAAACGAATGGAAAGGAAGT ATTTTTTTTTAAGAAGAGGCTCCGTGTCACTGAAACCAGTAGAGCTGCTA ACTGACAACATTGACGACCTTCACTGAGTTCTGTTCTGTCACTGTCACGT TTAACCGTTTTCTTCCCAACCATGATCCCTCTGCCGTCAGATTTGATTTC CCCATGACGACGCCCCTGGATGGCCAGAGGTACGATCTTCCCCTCCCTGA CGGGCATCATCGTGGTACGTACAGTACCGATCCGTCTATCGATCGTCGCT CTACCCAGAGGCACGTAACTCGCGAATATCGGATGGGGGTTGTTGACAGA GCGGTGAGTTGGTTAAGTTTGAAATCAGTATTATTCGGGATTTCCCCGTT TGTTTTTTGTTCGTTCATCCTTGAAGTTTGATTCCGGATGTTAGACGCCT TATTCGACCTGAAATTAGTTTGATGATGATGGTGGGCTTTCCGAGGATAG CAGTGTGTTTCGTGGAGTTATATATTGGTATGTTCCGACGCGATTCCTCT GGAACGAGGCTCGAGTTTGGGCAACGGAGCCGTCCGCACATACATACATA CATACAGTAGCGATAGAGTTTGAATTGACGTGATGCTTTCGGCGAAGGGG GATCATCGGCAACTGAATAGTTCAGGGATTGGCTTTAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1437:87159..89346-

>mRNA_F-serratus_M_contig1437.3122.1 ID=mRNA_F-serratus_M_contig1437.3122.1|Name=mRNA_F-serratus_M_contig1437.3122.1|organism=Fucus serratus male|type=CDS|length=2466bp|location=Sequence derived from alignment at F-serratus_M_contig1437:87159..89346- (Fucus serratus male)
ATGCGGTGCTTGTCTCCGTTACAAAAGTCTAACGGGGAGCCCTTGCGGGA
ACGGAGTGCTAATCTGGGAGGAGGAAAAAATGAGGCTGACTTACGGGCCG
CCACTCGCGGGGCCATCATGGCCGGAGATACGGGATTTGTTCGACACCTC
CTGCTTCAGCGGGAAACCTTTGTCGGCGCCAAGCCCAAGTTGATGAAGGA
TCTCCACCTTGCAGTTAAGCTGGGCAACGAGCCAATCGTGACGCTGCTGT
TGAGACACGGAGCGGGGGTCAACGCCCTCGACAGCAGAGGGCGCACCCCG
CTTCACCTGGCTTGCATACACGGCCACCTTTCCGTGGCAATCGCTCTCCT
GGAACACGGTGCCGATATGGGCATCATATTCACCGATGAAAACAACTACG
AGCACTGCGCACTGAGCTTCGCGGCTCGGATGGGCCACGAAGACGTAATG
AGGGCCTTGATTAAGCAGGGGCTGGACGTGAACAAGGCAAATTCTCGGGG
TTTGACAGCACTTCACTACGCCGCGGTCCGCAACCAGCCGCGAAGCATCG
AGATTCTGGTCGAGAATGGGGCCGACATCGAAGCCCGCGTTTCTGAAGCC
GGAGGTGGGGGGACTGCCCTTCACGCATCTGCTGTGATGCGCTGCTACGA
TGCCACGGCGGCCCTCTTGAGGCACGGTGCCAGCGTCAAGGCACGAAACG
CGTTCGGGTACACCCCGCTGCACGGAGTTGCGCGGCAGGCGGGGAGGGAT
GGCGCGCTCGAGATCGCCGACCTCTTGTTGACACGTGGGATGCGGTGCTT
GTCTCCGTTACAAAAGTCTAACGGGGAGCCCTTGCGGGAACGGAGTGCTA
ATCTGGGAGGAGGAAAAAATGAGGCTGACTTACGGGCCGCCACTCGCGGG
GCCATCATGGCCGGAGATACGGGATTTGTTCGACACCTCCTGCTTCAGCG
GGAAACCTTTGTCGGCGCCAAGCCCAAGTTGATGAAGGATCTCCACCTTG
CAGTTAAGCTGGGCAACGAGCCAATCGTGACGCTGCTGTTGAGACACGGA
GCGGGGGTCAACGCCCTCGACAGCAGAGGGCGCACCCCGCTTCACCTGGC
TTGCATACACGGCCACCTTTCCGTGGCAATCGCTCTCCTGGAACACGGTG
CCGATATGGGCATCATATTCACCGATGAAAACAACTACGAGCACTGCGCA
CTGAGCTTCGCGGCTCGGATGGGCCACGAAGACGTAATGAGGGCCTTGAT
TAAGCAGGGGCTGGACGTGAACAAGGCAAATTCTCGGGGTTTGACAGCAC
TTCACTACGCCGCGGTCCGCAACCAGCCGCGAAGCATCGAGATTCTGGTC
GAGAATGGGGCCGACATCGAAGCCCGCGTTTCTGAAGCCGGAGGTGGGGG
GACTGCCCTTCACGCATCTGCTGTGATGCGCTGCTACGATGCCACGGCGG
CCCTCTTGAGGCACGGTGCCAGCGTCAAGGCACGAAACGCGTTCGGGTAC
ACCCCGCTGCACGGAGTTGCGCGGCAGGCGGGGAGGGATGGCGCGCTCGA
GATCGCCGACCTCTTGTTGACACGTGGGGATGGCCACCTCCCTCTAGATT
TGATGGATGTCAACAGGAATAATAACGAAGACGACAGCAAAACAGAGGAG
AATAACGTCGAGCGGATGCGCAAGTTGTTTGAAAAGGCACCGGCCGACAG
AGCTTGGCGTCGCCGGGGCATCCTTGTTCTCTGCCGCGCTTTCCCAGAAA
GAGTGCGTCTAGGGCGCCCAAGAGATGCGGCGCACGCCGTTGAGGCTCCG
GTTGGTAAAGAAGGAGGGAGCAGCTGCACCACGTTGGACAGGGCGCAAGA
GAGCGGAAGGACGGTTTTTTATAGTGAGGTCAGCGAATACAACGGGGGCC
AGAAGCGGTCAGCTCCGGGGCCGGCCACGACGGCTGCTGAAGATTTCTTC
TGCAGAGCTGTCATAAACACGCTAACGCTTGCGGAAGATGGCATTTTCCG
GAGAATCGTAGCCTTTCTATGAGATGGCCACCTCCCTCTAGATTTGATGG
ATGTCAACAGGAATAATAACGAAGACGACAGCAAAACAGAGGAGAATAAC
GTCGAGCGGATGCGCAAGTTGTTTGAAAAGGCACCGGCCGACAGAGCTTG
GCGTCGCCGGGGCATCCTTGTTCTCTGCCGCGCTTTCCCAGAAAGAGTGC
GTCTAGGGCGCCCAAGAGATGCGGCGCACGCCGTTGAGGCTCCGGTTGGT
AAAGAAGGAGGGAGCAGCTGCACCACGTTGGACAGGGCGCAAGAGAGCGG
AAGGACGGTTTTTTATAGTGAGGTCAGCGAATACAACGGGGGCCAGAAGC
GGTCAGCTCCGGGGCCGGCCACGACGGCTGCTGAAGATTTCTTCTGCAGA
GCTGTCATAAACACGCTAACGCTTGCGGAAGATGGCATTTTCCGGAGAAT
CGTAGCCTTTCTATGA
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