mRNA_F-serratus_M_contig1436.3120.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1436.3120.1
Unique NamemRNA_F-serratus_M_contig1436.3120.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 329 bits (843), Expect = 1.050e-98
Identity = 162/324 (50.00%), Postives = 226/324 (69.75%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            LSA+G   RP+A GD+ RR++G V CR+YG  LA++F+P GQYGVAV GG E++A  A L  ++G  +L+YD  NAFNS+ R   LPALA+++P ++PYA+N+YAREPPKLL+  D G   V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV GA+ ++FIDD+ V+LP   + + AA   VT W+Q  +   G++LNR KS+ L   G   +   E+ R  ++ T L V   GMR+VGVPVG   + +    +   GEP +L++ +A ++DAQAS QILR SA +RL+ LLR++PP +T +AA+ +D  VE  L +I+
Sbjct: 1224 LSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETIL 1546          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 2.310e-96
Identity = 159/324 (49.07%), Postives = 214/324 (66.05%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            LSALG+  RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  +GI L+  KS+ L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+
Sbjct:  188 LSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIV 511          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 7.480e-96
Identity = 156/324 (48.15%), Postives = 212/324 (65.43%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            LSALG+  RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P +  Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  +GI L+  KS  L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+  L+ ++D Q S+Q+LR+S   RL HLLRT+ PSIT  AA  +D+L+ WA++ I+
Sbjct:   36 LSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIV 359          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.860e-95
Identity = 158/324 (48.77%), Postives = 216/324 (66.67%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            LSALG+  RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+
Sbjct:  188 LSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIV 511          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 8.780e-94
Identity = 158/324 (48.77%), Postives = 216/324 (66.67%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            LSALG+  RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+
Sbjct:  188 LSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIV 511          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 2.190e-92
Identity = 157/324 (48.46%), Postives = 216/324 (66.67%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            LSALG+  RP+A G VLRR+I   F R+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A + P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+
Sbjct:   36 LSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIV 359          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 2.140e-59
Identity = 105/210 (50.00%), Postives = 138/210 (65.71%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQAL 630
            LSALG+  RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L
Sbjct:  188 LSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.380e-57
Identity = 100/210 (47.62%), Postives = 138/210 (65.71%), Query Frame = 1
Query:  343 LDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            ++ G  E+V S RGVQQGCNLG   +S G L  +KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  +GI L+  KS+ L  +G     LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIV 210          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 3.650e-45
Identity = 80/177 (45.20%), Postives = 118/177 (66.67%), Query Frame = 1
Query:  442 LKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII 972
            +KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+P GTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIV 177          
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.140e-44
Identity = 112/321 (34.89%), Postives = 175/321 (54.52%), Query Frame = 1
Query:    1 LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF-LKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWAL 960
            L ALG+  RPV  G   RR+I A   R++  KL + F+   Q+GVAV+GGVE +A+ A LV + G  I+  D +NAFN+  R   +   A+ +P +V Y +  Y   P   ++ +D G    +E   GVQQG  +GP  +S   + I+ + +      G    +++DDIT+ L   + L   ++  +T+ + E L   GI +NR KS AL   G     +T++QR  ++  GLTV  +G+ VVGVP+GT+ + R+F +K    G   +L R L  M D Q +  I  LS   R +++ R + P++T +A    D +V+WAL
Sbjct:  610 LIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHL---KDLTEESVQAMTDLVDE-LAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1436.3120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN1.050e-9850.00Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KGJ4_9PHAE2.310e-9649.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE7.480e-9648.15Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JCM0_9PHAE1.860e-9548.77Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE8.780e-9448.77Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE2.190e-9248.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE2.140e-5950.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE2.380e-5747.62Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE3.650e-4545.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH58_9PHAE1.140e-4434.89Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1436contigF-serratus_M_contig1436:186729..187703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score93.6
Seed ortholog evalue1.8e-16
Seed eggNOG ortholog400682.PAC_15702057
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size975
Cds size975
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929422.4822636-CDS-F-serratus_M_contig1436:186728..1877031622929422.4822636-CDS-F-serratus_M_contig1436:186728..187703Fucus serratus maleCDSF-serratus_M_contig1436 186729..187703 +
1690962844.7521696-CDS-F-serratus_M_contig1436:186728..1877031690962844.7521696-CDS-F-serratus_M_contig1436:186728..187703Fucus serratus maleCDSF-serratus_M_contig1436 186729..187703 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1436.3120.1prot_F-serratus_M_contig1436.3120.1Fucus serratus malepolypeptideF-serratus_M_contig1436 186729..187703 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1436.3120.1

>prot_F-serratus_M_contig1436.3120.1 ID=prot_F-serratus_M_contig1436.3120.1|Name=mRNA_F-serratus_M_contig1436.3120.1|organism=Fucus serratus male|type=polypeptide|length=325bp
LSALGQNARPVACGDVLRRVIGAVFCRRYGRKLADYFQPWGQYGVAVSGG
VEIMALTATLVFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYA
SNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKE
FRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEGI
SLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTE
QFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTV
PPSITGQAAANYDALVEWALASIIA
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mRNA from alignment at F-serratus_M_contig1436:186729..187703+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1436.3120.1 ID=mRNA_F-serratus_M_contig1436.3120.1|Name=mRNA_F-serratus_M_contig1436.3120.1|organism=Fucus serratus male|type=mRNA|length=975bp|location=Sequence derived from alignment at F-serratus_M_contig1436:186729..187703+ (Fucus serratus male)
CTTTCCGCCTTGGGGCAAAATGCGAGACCAGTGGCGTGCGGCGATGTATT GCGGAGAGTAATTGGCGCTGTTTTCTGCCGCCGATACGGCAGGAAGCTGG CAGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGTTTCAGGCGGA GTAGAGATAATGGCGCTCACTGCAACACTGGTTTTCGAAGAGGGTTGTAC CATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACA GGTTCCTGCCCGCGCTAGCGGAAATCGTCCCCTCAGTGGTCCCCTACGCA TCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGCACTAGACGG TGGAGGTTCGGAAGTGGTCGAGTCAGCACGGGGAGTACAGCAAGGATGTA ATCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAA TTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGA CGATATCACGGTCATTCTTCCACCTGAACGTTCTCTCGATGTGGCAGCTA TAGGGAAAGTTACGGAATGGCTACAGGAGCGCCTGGGGATAGAAGGTATC TCGCTGAACCGAAGGAAATCGCAGGCCCTGCTGGCAGATGGAGTGGGGCC AGAACAGCTGACGGAAGAGCAGCGAGTGGCAATGGATACCACAGGGCTCA CGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTTGGAACAGAA CAGTTCCAGCGTGATTTCTTAAAAGAGGCGGTTAATGGAGAGCCAGCTGA GCTCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGA TTTTGCGTCTATCCGCCACTTCTCGCCTCTCACATCTGCTCCGAACAGTC CCGCCCTCCATCACAGGCCAAGCTGCAGCAAATTATGACGCTTTGGTGGA GTGGGCGCTGGCGTCTATCATAGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1436:186729..187703+

>mRNA_F-serratus_M_contig1436.3120.1 ID=mRNA_F-serratus_M_contig1436.3120.1|Name=mRNA_F-serratus_M_contig1436.3120.1|organism=Fucus serratus male|type=CDS|length=1950bp|location=Sequence derived from alignment at F-serratus_M_contig1436:186729..187703+ (Fucus serratus male)
CTTTCCGCCTTGGGGCAAAATGCGAGACCAGTGGCGTGCGGCGATGTATT
GCGGAGAGTAATTGGCGCTGTTTTCTGCCGCCGATACGGCAGGAAGCTGG
CAGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGTTTCAGGCGGA
GTAGAGATAATGGCGCTCACTGCAACACTGGTTTTCGAAGAGGGTTGTAC
CATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACA
GGTTCCTGCCCGCGCTAGCGGAAATCGTCCCCTCAGTGGTCCCCTACGCA
TCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGCACTAGACGG
TGGAGGTTCGGAAGTGGTCGAGTCAGCACGGGGAGTACAGCAAGGATGTA
ATCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAA
TTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGA
CGATATCACGGTCATTCTTCCACCTGAACGTTCTCTCGATGTGGCAGCTA
TAGGGAAAGTTACGGAATGGCTACAGGAGCGCCTGGGGATAGAAGGTATC
TCGCTGAACCGAAGGAAATCGCAGGCCCTGCTGGCAGATGGAGTGGGGCC
AGAACAGCTGACGGAAGAGCAGCGAGTGGCAATGGATACCACAGGGCTCA
CGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTTGGAACAGAA
CAGTTCCAGCGTGATTTCTTAAAAGAGGCGGTTAATGGAGAGCCAGCTGA
GCTCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGA
TTTTGCGTCTATCCGCCACTTCTCGCCTCTCACATCTGCTCCGAACAGTC
CCGCCCTCCATCACAGGCCAAGCTGCAGCAAATTATGACGCTTTGGTGGA
GTGGGCGCTGGCGTCTATCATAGCCCTTTCCGCCTTGGGGCAAAATGCGA
GACCAGTGGCGTGCGGCGATGTATTGCGGAGAGTAATTGGCGCTGTTTTC
TGCCGCCGATACGGCAGGAAGCTGGCAGACTACTTCCAGCCCTGGGGCCA
GTACGGCGTAGCAGTTTCAGGCGGAGTAGAGATAATGGCGCTCACTGCAA
CACTGGTTTTCGAAGAGGGTTGTACCATTCTCTCATACGACGGAGCAAAC
GCCTTCAACAGTATATACCGCCACAGGTTCCTGCCCGCGCTAGCGGAAAT
CGTCCCCTCAGTGGTCCCCTACGCATCAAACCTGTACGCACGGGAACCCC
CAAAACTCCTGTTTGCACTAGACGGTGGAGGTTCGGAAGTGGTCGAGTCA
GCACGGGGAGTACAGCAAGGATGTAATCTAGGTCCACTTTGCTACAGCGC
AGGCTCACTGAAGATCCTAAAAGAATTCAGGGCCAACCCACCGGTGCCAG
GAGCGAGAGCGGTTTCGTTCATCGACGATATCACGGTCATTCTTCCACCT
GAACGTTCTCTCGATGTGGCAGCTATAGGGAAAGTTACGGAATGGCTACA
GGAGCGCCTGGGGATAGAAGGTATCTCGCTGAACCGAAGGAAATCGCAGG
CCCTGCTGGCAGATGGAGTGGGGCCAGAACAGCTGACGGAAGAGCAGCGA
GTGGCAATGGATACCACAGGGCTCACGGTGGTCCGACAGGGGATGAGGGT
TGTGGGAGTACCAGTTGGAACAGAACAGTTCCAGCGTGATTTCTTAAAAG
AGGCGGTTAATGGAGAGCCAGCTGAGCTCGTGAGGGCGCTGGCCCCAATG
GAGGATGCCCAAGCGAGCTTTCAGATTTTGCGTCTATCCGCCACTTCTCG
CCTCTCACATCTGCTCCGAACAGTCCCGCCCTCCATCACAGGCCAAGCTG
CAGCAAATTATGACGCTTTGGTGGAGTGGGCGCTGGCGTCTATCATAGCC
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