mRNA_F-serratus_M_contig1432.3100.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1432.3100.1
Unique NamemRNA_F-serratus_M_contig1432.3100.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 1.590e-110
Identity = 225/555 (40.54%), Postives = 309/555 (55.68%), Query Frame = 3
Query:   12 EQRLLARQYGGVIIPDNICLTNRYHLKLCLIIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGYPQVIIADVDAAMTCAVSAIFPG--TTHLHCLWHITINIRKLCQGALESG-AGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG--------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASM-TQQPDDQVDE-------------CCPIPDEAVAAD-LTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYK-ESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHPGGDLPYSHG*RVLDSVTSTVMSAVRTRR-----------GFTGDQEGFDCRED-KGTSGNISAASVTRGRLLANLIEMASKGARTLDNLDEKKVLSSD*PIFFATLNRDIDTYVK 1559
            EQ LLAR YGGV+I DN CLTNRY+ KLCL +GVDSE +     Q F    +       ++  + ICGG+P+VII D DAAM  ++  +FP   TTHL C WHI  NI+K C   L+S     L+R    A+ ATS                  FD +WT   D VKGT CE         +RK+WARCFHPTVMTLDMT+SQRVEG   V+K+GR + R S+   +RA+ ++   ++ +AS + +T +  LGK +V++D+ KS+  +      VG+S YA  E+ AE  AS+ Y T  ++ G D   FL ++ T+  +D  D              CC +P E    D   DTTMFGTTSL SF  LVE V ID +VKV+YK+K +    H+V++GP GFQ+C+CLQ+LRRGL  R  +AALVT+ K ++E KG+SIHP          R   SV    ++ V+              GFTGD E     ED +G + ++S  SV RGR  ANL E+ ++  RT  +   +   ++D    F  L R ++ +V+
Sbjct:   73 EQILLARTYGGVVIQDNTCLTNRYNNKLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGGHPKVIITDSDAAMKESIRGVFPPPHTTHLLCSWHICKNIKKKCLSILKSEKCADLLRRWTRASLATSIEA---------------FDGVWTDVEDLVKGTDCEEYILKFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKGRVLRRNSTFRQVRAKCEQIAGELRLASTMQATKQTSLGKGYVENDVKKSMEKVMTAYAEVGASKYAKEEIWAEMLASSAYDTSIVTEGRDSMQFLQNLATRSVNDSNDSTNVSGHDHGAGDVCCQVPKEVFEEDEAPDTTMFGTTSLHSFCRLVECVEIDCIVKVLYKHKPDRKVGHLVIVGPGGFQLCTCLQLLRRGLQCRHVLAALVTRLKRSDEFKGQSIHP----------RWRSSVEPWSIAEVKLGTFDGDGDGSYDGGFTGDWEPSGDFEDLQGDNTSVSVLSVLRGRAFANLTELCNRAVRTYTDSMTRDSTTAD-QSMFGDLMRHVNDFVE 601          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 1.090e-94
Identity = 225/618 (36.41%), Postives = 309/618 (50.00%), Query Frame = 3
Query:    6 TAEQRLLARQYGGVIIPDNICLTNR------------------------------------YHLKLCLIIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGYPQVIIADVDAAMTCAVSAIFPGTT-HLHCLWHITINIRKLCQGALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG--------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSG-ADVASF---LASMTQQPDDQVDECCPIPDEAVAADLT-DTTMFGTTSLLSFSGLVENVPIDAVVKVIYKY----KESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHPG---GDLPYSHG*RVLDSVTSTVMSAVRT-RRGFTGDQEGFDCREDKGTSGNISAASVTRGRLLANLIEMASKGA-RTLDNLDEKKVLSSD*PIFFATLNRDIDTYVKVASGGTGGLSGLGNPSMSITKSRRGSRFKDC--TEGHAPKK 1676
            T +Q++ ARQ+GG+++ DN  LTNR                                    Y +   L IGVDSE +     Q F   ++        +    ICGG P+VII D DA MT AV    P TT HL+CLWH+  N+RK C  AL   A    RL+  AAFA +E                     W++   HVKG+ CE           ++W+RCF PT MTL+MTA+QRVEG+  V+K+GR ++RR SL  ++AEL+KR     +AS LLST    LG+  + D +LK+   + R+L  VG+S+YA NE++AE RASA Y T  L+   AD A+    L  + ++       C  +P EA       D TM+GTTSL SF+ LV NV I+AVV+V YKY    +    SHIVV+GP GFQ+C+CL+++R GLP     AALVT+   A++  G SIHP      + +S     L +V         T   GFT D  G D   D   + N S A  TR +   + I MA + A +    LD                  ++   ++   G + GL+GLGNP +++   R+ +R KD   TEG  PKK
Sbjct:   92 TGQQQVFARQWGGIVLQDNTALTNRVLVLIRLIFATGKMSDEHPVRLRFIQPRAFASRSCRYGMHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQPEVIITDADAGMTHAVETFLPSTTVHLYCLWHVMKNVRKNCARALGKKASRFYRLLHAAAFAATEEA---------------CSDAWSEIFRHVKGSDCEEYVTGHLLRHHRHWSRCFFPTTMTLNMTATQRVEGMFSVLKKGRIVNRRCSLVRVKAELEKRIAGFTLASNLLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYAVNEMVAEMRASAAYDTAVLTDKQADDAACHDCLDGLAERGGRTEGYCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRWRKSVVEWS-----LRNVALGTFDGHETFTGGFTEDFGGGDFDGDSQDTLNTSVA-YTRKKAYVDYIAMAQQWANQAAATLDGTPAAYQAYCAMVERQRHEVQALLR-GPGPSDGLAGLGNPPIALPNDRKETRHKDAAGTEGGRPKK 687          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 6.920e-77
Identity = 184/497 (37.02%), Postives = 248/497 (49.90%), Query Frame = 3
Query:   12 EQRLLARQYGGVIIPDNICLTNRYHLKLCLIIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGY--------------PQVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQGALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCE--------GQRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRL-------------------------------------------------------LSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQP---DDQVDECCPIPDEAVAADL-TDTTMFGTTSLLSFSGLVENVPI---DAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHP 1250
            EQ +LAR YGG++I DN CL NRY  KLCL +GVDSE +     Q              +  L++I GG               PQVII D DAAMT +V+ + P T HL+  WHI+ N+++ C G + +    ++R    A+FATS                  F+ IW    + V+GT CE         QRK+WARC HPT MTL MTASQRVEG   VIK G  + + S+   +R  ++   E +A+ASR+                                                       LST    L    ++DD+ K++ P+ +E ++ G+S+YA  E++AE  AS  Y T  L  G +   FL  +  QP   D   D CC +P +        DT+MFGTT L SF  LV +V I   DAVVKV+YK ++    H+VVIGPDGFQ+C+CLQ++RRGL  R  +AALVT+   A+E KGE IHP
Sbjct:  846 EQIMLARTYGGIVIQDNTCLINRYDFKLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGGTQSHHLLPTPPTPHPPQVIITDADAAMTSSVAELMPHTKHLYSSWHISKNLKRKCGGEVFAD---VIRRYTAASFATSMKA---------------FERIWNNLKEVVEGTPCEEYINGYLFDQRKHWARCCHPTTMTLGMTASQRVEGSFSVIKNGGAVRKNSTFGAVRKRVETVAEDLALASRMWVSRGVKARVALYHIFILIHCIGMYGLLRGVSHTVEPASFTITSITAVRCLSPCRLSTKAGSLRFAHMEDDVKKAIEPVMKEYEKAGASTYARREIMAEMVASDSYDTTVLVKGRESKRFLEDLAAQPSNNDGNGDVCCQVPADVFDGKKHPDTSMFGTTCLQSFYRLVAHVDIYMGDAVVKVVYKRRK--VGHLVVIGPDGFQLCACLQLMRRGLQCRHVLAALVTELDRASEFKGEFIHP 1322          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 5.200e-35
Identity = 125/340 (36.76%), Postives = 174/340 (51.18%), Query Frame = 3
Query:  705 RLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSG-ADVASF---LASMTQQPDDQVDECCPIPDEAVAADLT-DTTMFGTTSLLSFSGLVENVPIDAVVKVIYKY----KESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHPG---GDLPYSHG*RVLDSVTSTVMSAVRT-RRGFTGDQEGFDCREDKGTSGNISAASVTRGRLLANLIEMASKGA-RTLDNLDEKKVLSSD*PIFFATLNRDIDTYVKVASGGTGGLSGLGNPSMSITKSRRGSRFKDC--TEGHAPKK 1676
            R LST    LG+  + D +LK+   + R+L  VG+S+YA NE++AE RASA Y T  L+   AD A+    L  + ++       C  +P EA       D TM+GTTSL SF+ LV NV I+AVV+V YKY    +    SHIVV+GP GFQ+C+CL+++R GLP     AALVT+   A++  G SIHP      + +S     L +V         T   GFT D  G D   D   + N S A  TR +   + I MA + A +    LD                  ++   ++   G + GL+GLGNP +++   R+ +R KD   TEG  PKK
Sbjct:  701 RRLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYAVNEMVAEMRASAAYDTAVLTDKQADDAACHDCLDGLAERGGRTEGYCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRWRKSVVEWS-----LRNVALGTFDGHETFTGGFTEDFGGGDFDGDSQDTLNTSVA-YTRKKAYVDYIAMAQQWANQAAATLDGTPAAYQAYCAMVERQRHEVQALLR-GPGPSDGLAGLGNPPIALPNDRKETRHKDAAGTEGGRPKK 1033          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.370e-32
Identity = 141/513 (27.49%), Postives = 216/513 (42.11%), Query Frame = 3
Query:  102 IIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGY-PQVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQGAL--ESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGA-------------------DVASFLASMTQQ--PDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVT-------KPKLANEIKGESIHP-------GGDLPYSHG*RVLDSVTSTVMSAVRTRRGFTGDQEGFDCREDKGTSGNISAASVTRGRLLANLIEMASKGARTLDNLDEKKVLSS 1505
            ++GVD E +   LGQ               E      GG  P+V++ D D AMT A+   +  T HL CLWH+  N+ K C  +   +     ++RL  +AA+A +       R   +++               VKG KCE         +  WA    PT++T+ M A+QR EG+ GV KR   + ++ SL G+  +LQ   +K+ V    ++T  +     F    L    API+ EL RVG+S Y   E  AE   S  Y    + +GA                   +   F  S+ ++  PD  +++ C    EA + +  D++++  TSL +   L+  +P+     V YK   +   H+VV GP+GF +CSCL++LR GL  R   A LV           L +   G S+H        G D P++          S V+       G+ G +EG D      T  +  A             E A+K A      DE++V +S
Sbjct:    1 MVGVDDENRSCVLGQGVLRSECKETFQWFLEAYETAAGGRRPKVMLTDADRAMTSALEE-WTTTLHLFCLWHVFKNVLKNCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKI---------------VKGKKCEEYMDALIQDKTKWAFSCRPTLLTMGMVATQRTEGMFGVAKRS-GVHKKLSLCGLWEKLQLMYQKMDVEYSRVATRGVGAELPFQTKHLQGIFAPIQEELKRVGASQYCQVEARAEVGGSQSYDVEVICAGATDDDGRPDPLGEGVLRRKLEAVRFDLSLFEEAKPDTDLEKDCMRGPEAESTE--DSSVWARTSLEALLDLIGELPVHVAAAVRYKLTPARPGHVVVFGPNGFHLCSCLKLLRHGLVCRHYFAVLVRFLGCRFKGILLDHRFDGNSLHARWRQSLDGNDEPWT---------VSRVLKETGHGDGWDGCEEGADDNFWGPTFDDDDAGDGVHPS------ERAAKAAAARSATDERRVFAS 479          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.000e-30
Identity = 105/331 (31.72%), Postives = 151/331 (45.62%), Query Frame = 3
Query:  279 FPGTTHLHCLWHITINIRKLCQG--ALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASF--------------LASMTQQPDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALV 1202
            +PGT HLHCLWH+  N+ K C    A       +++     A+A +  V               F     +    V G KCEG        +  WA C  PTV+TL M A+QR EG+ GV K    + ++ SL  +   LQ+ ++ IA+ +  L+T  L  G  F    +     P+++EL   G+S Y      A+S  + +  +  +    D   F              L  +   P D   E   +  EA      D TM+  TSL +F  L+E++PI+ VV V YK+  +  SH+VV GP  F +CSCLQ+LRR LP R   A LV
Sbjct:  681 WPGTMHLHCLWHVFKNVLKNCSSSFAYNDDKTDMMQCFRNEAYAATPEV---------------FGTQVARLEQLVAGKKCEGYIADLIKNKTKWAFCCRPTVLTLGMVATQRTEGLFGVAKSS-GVEKKLSLCALWDRLQRLSKMIAIETARLATPPLGAGVAFGDIHVENFFRPVKQELLACGASQYCQQVDEAQSYDAELVSSGRVEENGDPLPFHENDLAKIRSLRLKLNVLQVAPPDTDLEGDQLAGEAAV----DNTMWARTSLSAFLDLIEDIPIELVVAVRYKWTANRPSHLVVFGPHNFHLCSCLQLLRRRLPCRHYFAVLV 991          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5L372_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L372_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.410e-22
Identity = 111/407 (27.27%), Postives = 155/407 (38.08%), Query Frame = 3
Query:  225 QVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQG--ALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQK--RTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQPDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVT---------KPKLANEIKGESIHPG-------GDLPYSHG*RVLDSVTSTVMSAVRTRRGFTGDQEGFD 1364
            QVI+ D D AMT A+++ +PGT HLHCLWH+  N+ K C    A       ++R     AFA +  V               F     +    V G KCEG        +  WA C   TV+TL M A+QR   +                    AEL    R E+      L   D  K+    ++ ++L+ VAP   +L+                             G  +A   A                          D TM+  TSL +F  L+E++PI+  V V YK   +  SH+VV G   F +CSCLQ+LRRGLP R   A LV          +    +   G  +H          D P+S          S+V+S+     G+ G+ EG D
Sbjct:   51 QVILTDADLAMTAAIASCWPGTLHLHCLWHVFKNVFKNCSSSFATNDDKTDMMRCFRNEAFAATPEV---------------FGTQVARLEQLVAGKKCEGYIADLIKNKTKWAFCCRSTVLTLGMVATQRSPKV-------------DEAQAYDAELVSSGRVEENGDPLPLHEHDLAKIRSLRLKLNILQ-VAPPNTDLE-----------------------------GDQIAGEAA-------------------------VDNTMWARTSLSAFLDLIEDIPIELFVAVRYKRAANRPSHLVVFGLHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREVVNDSPWS---------ISSVLSSSGHSVGWDGNDEGRD 365          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5KKN6_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.110e-21
Identity = 102/377 (27.06%), Postives = 145/377 (38.46%), Query Frame = 3
Query:  204 KICGGYPQVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQGALESGAGI--LVRLVETAAFATSENV---------HPPPRYPWKRVP---------------------CPGFDAIWTKAT---DHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLST-DRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQPDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVT 1205
            + C G   VI+ D D AMT A+++ +PGT HLH LWH   N+ K C  +  +      ++R    AAFA +  V         H  P   W  +P                     C  +    T+       V G KC+G        +  WA C  PTV+TL M A+QR EG                      E Q    ++  + R+    D L L ++               +L ++ S     N L                               PD  ++      D+       D TM+  TSL +   L+E++PI+ VV V YK+  +  SH+VV GP    +CSCLQ+LRRGLP R   A LV+
Sbjct:   35 RACCGL-SVILTDADLAMTAAIASCWPGTLHLHSLWHGFKNVLKNCSSSFANNDDKTDMMRCFRNAAFAATPEVRWQSLVRCRHTTPPREWIGLPHQFAPPQRAVNITFDVSCVYHCIRWHVFGTQVARLEQLVAGKKCKGYIADLIKNKTKWAFCCRPTVLTLGMVATQRTEG----------------------EAQSYDAELVSSGRVEENGDPLPLYEH---------------DLAKIRSLCLKLNIL---------------------------QVAPPDTDLEG-----DQLAGEAAVDNTMWAPTSLSASLDLIEDIPIELVVAVRYKWTPNRPSHLVVFGPHNLHLCSCLQLLRRGLPCRHYFAVLVS 341          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5K6K4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K4_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.400e-21
Identity = 59/119 (49.58%), Postives = 69/119 (57.98%), Query Frame = 3
Query:  903 FLASMTQQP---DDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHP 1250
            FL  +T  P   D   D CC +P EA        T FG   L SF  LV NV IDA VKV YKY+    SH+VV+GPD FQMC+CLQV+RRG   R  +AALV   +  +E  G SIHP
Sbjct:   31 FLEDLTAHPSNRDGNGDVCCEVPREAFDGKDNPETKFGAICLQSFFRLVANVKIDAGVKVSYKYRSPTVSHLVVLGPDRFQMCTCLQVMRRGWQCRHVLAALVRSNR-DSEFAGASIHP 148          
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5KQW8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQW8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 3.110e-17
Identity = 78/246 (31.71%), Postives = 127/246 (51.63%), Query Frame = 3
Query:  495 HVKGTKCEGQRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKY-----FVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQPDDQVDECCPIPDEAVAADLTD-----TTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNA-SHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAAL 1199
            H +   C  +R+ WA CF+P  +TL +T++QRVE +  V+K    ISR SSL+ + A L+    K+ + S   + D++ L K+      V   +LK   PI + L ++G+S+YA +   +E+ A+  Y T  L+ G+D  + L     + +  V      PD     ++ D      TM+  TSL +F  L+    I  V K+ ++   ++  +H+VV GP GF +CSCL +L  G   R  +A L
Sbjct:  195 HPQTFYCGRKREKWAFCFNPGALTLGITSTQRVERMNAVLKH--LISRYSSLSRLDAALETVEAKLHLESERGNNDKV-LMKHPTWSSGVLGTMLKFFEPIGQALKQLGASNYALDVTKSEAVAAMTYATERLAQGSDAVTTLLPTLSRGEGGV-RFATAPDSRDLPNIDDDGGDDATMYARTSLPAFCALLHGQDITEVYKISFRSGGADGRAHLVVTGPGGFYLCSCLHLLHTGRFCRHFLAVL 436          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF6_ECTSI1.590e-11040.54Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5JEJ0_9PHAE1.090e-9436.41SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K454_9PHAE6.920e-7737.02SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJS4_9PHAE5.200e-3536.76SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JY17_9PHAE1.370e-3227.49SWIM-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5KBY4_9PHAE1.000e-3031.72SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L372_9PHAE2.410e-2227.27SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KKN6_9PHAE1.110e-2127.06SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K6K4_9PHAE1.400e-2149.58SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KQW8_9PHAE3.110e-1731.71SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1432contigF-serratus_M_contig1432:123151..126247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score257.7
Seed ortholog evalue7.7e-66
Seed eggNOG ortholog2880.D7FLF6
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMGX@1,2QQB8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2142
Cds size1026
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929418.7728827-UTR-F-serratus_M_contig1432:123150..1232291622929418.7728827-UTR-F-serratus_M_contig1432:123150..123229Fucus serratus maleUTRF-serratus_M_contig1432 123151..123229 +
1690962842.968077-UTR-F-serratus_M_contig1432:123150..1232291690962842.968077-UTR-F-serratus_M_contig1432:123150..123229Fucus serratus maleUTRF-serratus_M_contig1432 123151..123229 +
1622929418.7843273-UTR-F-serratus_M_contig1432:123350..1234981622929418.7843273-UTR-F-serratus_M_contig1432:123350..123498Fucus serratus maleUTRF-serratus_M_contig1432 123351..123498 +
1690962842.9800029-UTR-F-serratus_M_contig1432:123350..1234981690962842.9800029-UTR-F-serratus_M_contig1432:123350..123498Fucus serratus maleUTRF-serratus_M_contig1432 123351..123498 +
1622929418.8014424-UTR-F-serratus_M_contig1432:123729..1237561622929418.8014424-UTR-F-serratus_M_contig1432:123729..123756Fucus serratus maleUTRF-serratus_M_contig1432 123730..123756 +
1690962842.99011-UTR-F-serratus_M_contig1432:123729..1237561690962842.99011-UTR-F-serratus_M_contig1432:123729..123756Fucus serratus maleUTRF-serratus_M_contig1432 123730..123756 +
1622929418.8876605-UTR-F-serratus_M_contig1432:125385..1262471622929418.8876605-UTR-F-serratus_M_contig1432:125385..126247Fucus serratus maleUTRF-serratus_M_contig1432 125386..126247 +
1690962843.0762303-UTR-F-serratus_M_contig1432:125385..1262471690962843.0762303-UTR-F-serratus_M_contig1432:125385..126247Fucus serratus maleUTRF-serratus_M_contig1432 125386..126247 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929418.813604-CDS-F-serratus_M_contig1432:123756..1239181622929418.813604-CDS-F-serratus_M_contig1432:123756..123918Fucus serratus maleCDSF-serratus_M_contig1432 123757..123918 +
1690962843.0002122-CDS-F-serratus_M_contig1432:123756..1239181690962843.0002122-CDS-F-serratus_M_contig1432:123756..123918Fucus serratus maleCDSF-serratus_M_contig1432 123757..123918 +
1622929418.8241248-CDS-F-serratus_M_contig1432:124027..1241311622929418.8241248-CDS-F-serratus_M_contig1432:124027..124131Fucus serratus maleCDSF-serratus_M_contig1432 124028..124131 +
1690962843.0091972-CDS-F-serratus_M_contig1432:124027..1241311690962843.0091972-CDS-F-serratus_M_contig1432:124027..124131Fucus serratus maleCDSF-serratus_M_contig1432 124028..124131 +
1622929418.84095-CDS-F-serratus_M_contig1432:124291..1244801622929418.84095-CDS-F-serratus_M_contig1432:124291..124480Fucus serratus maleCDSF-serratus_M_contig1432 124292..124480 +
1690962843.029639-CDS-F-serratus_M_contig1432:124291..1244801690962843.029639-CDS-F-serratus_M_contig1432:124291..124480Fucus serratus maleCDSF-serratus_M_contig1432 124292..124480 +
1622929418.8616443-CDS-F-serratus_M_contig1432:124642..1247601622929418.8616443-CDS-F-serratus_M_contig1432:124642..124760Fucus serratus maleCDSF-serratus_M_contig1432 124643..124760 +
1690962843.0447562-CDS-F-serratus_M_contig1432:124642..1247601690962843.0447562-CDS-F-serratus_M_contig1432:124642..124760Fucus serratus maleCDSF-serratus_M_contig1432 124643..124760 +
1622929418.8725657-CDS-F-serratus_M_contig1432:124932..1253851622929418.8725657-CDS-F-serratus_M_contig1432:124932..125385Fucus serratus maleCDSF-serratus_M_contig1432 124933..125385 +
1690962843.058645-CDS-F-serratus_M_contig1432:124932..1253851690962843.058645-CDS-F-serratus_M_contig1432:124932..125385Fucus serratus maleCDSF-serratus_M_contig1432 124933..125385 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1432.3100.1prot_F-serratus_M_contig1432.3100.1Fucus serratus malepolypeptideF-serratus_M_contig1432 123757..125385 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1432.3100.1

>prot_F-serratus_M_contig1432.3100.1 ID=prot_F-serratus_M_contig1432.3100.1|Name=mRNA_F-serratus_M_contig1432.3100.1|organism=Fucus serratus male|type=polypeptide|length=342bp
MTCAVSAIFPGTTHLHCLWHITINIRKLCQGALESGAGILVRLVETAAFA
TSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEGQRKYWARCFHP
TVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVAS
RLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRAS
AVYVTVTLSSGADVASFLASMTQQPDDQVDECCPIPDEAVAADLTDTTMF
GTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQ
VLRRGLPFRRTVAALVTKPKLANEIKGESIHPGGDLPYSHG*
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mRNA from alignment at F-serratus_M_contig1432:123151..126247+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1432.3100.1 ID=mRNA_F-serratus_M_contig1432.3100.1|Name=mRNA_F-serratus_M_contig1432.3100.1|organism=Fucus serratus male|type=mRNA|length=3097bp|location=Sequence derived from alignment at F-serratus_M_contig1432:123151..126247+ (Fucus serratus male)
GGCCGACCGCTGAGCAGCGGCTCCTCGCTAGGCAATATGGGGGTGTCATC ATCCCGGACAACATTTGCTTGACAAACCGGTTTGCGAATGTTGGGGTGGA TGGACCACTACATGGGGAAGGCTTTGTGGTCGAAATGCAAGCGTGAGCGA CCATCGTCGTCGTTCCGCGTCTTCACTGTACCGTCCATCGTCATCGTCAG ATATCACTTGAAGCTATGCTTGATCATCGGGGTCGATTCGGAGAAACAAG TCGCGGGTCTTGGCCAAAGCTTTCCTCTCTGACGAGCAGACGGCCTCATT TGAGTACGTTCTGAACCACTCGTCAAGATATGCGGCGGTTACCCGCAGGT TAGTCGCGCGGAAACAACCAATCGTTTCGAGGGTATGTCGTCTGGTGGGT TCTATATTAGAGCGCGCCTCATGGGGAGGTGTAAGTCTTGAGTATCTCAC CAAATATTCCAGTGTTTGACTCCCCACGATTTGGGGCCTCACGATTTGAC CCCTCGATAACCCCTTTTTAGGAATATATATAGAGCATATTCCTGATCGC GCCCTACGCTGCGTCTATGTTTACTGCAGGTGATAATCGCGGATGTTGAC GCTGCGATGACCTGCGCCGTGTCAGCCATTTTCCCCGGTACTACGCACCT TCACTGCCTTTGGCACATCACGATAAACATCAGAAAACTGTGCCAAGGAG CGCTGGAGAGTGGAGCAGGCATTTTGGTGAGGCTGGTCGAGACAGCAGCG TTCGCCACCTCGGAAAACGTGAGTCGCCTTATTGTTATATAAGTTTCTTA CCGCGTGGGAGTAGCATGATCTATTTGGGCCCATGGATTGAGTGACGCGA TTATCATCTCCTGTGGTCTCCTCCCAGGTGCACCCACCGCCACGCTATCC ATGGAAACGTGTTCCGTGTCCGGGATTTGACGCCATCTGGACCAAAGCGA CCGACCACGTCAAGGGCACCAAGTGCGAGGGGTAAGTCACGAACTACCTG TTCCAGCAAGTCTTGCGGTCGAAACAATGTTGGGCAAATATTTACACAGC GTGGTCCATGTCCTCTTCTTTGCGACAGCGACAAAAGGTAAACATAAGTT TTTTTCCCGCTGACATGTTGCGCCTTGCATCGTTCTAACAGGCAAAGGAA GTATTGGGCGCGCTGCTTCCACCCAACGGTCATGACCTTGGACATGACGG CATCTCAGCGAGTCGAGGGCATTCTCGGTGTGATAAAGAGAGGACGCTTC ATCAGTAGGCGCTCTTCTCTCGCTGGGATGCGAGCGGAACTGCAGAAGCG AACGGAAAAGATCGCTGTCGCGTCTCGGCTGTGAGTCGCTCGTTCACAGC ACATCCTTTACAGAATTCTCGATAATTGTGACAAAGATTAGGCGGTGAGC AAATGGGTGAAATAATACGTAAATATCGATACCCACTCATTGCTCGATAT ATGATCGTTGCTCGTCGTCCCTTCACGCCTCTATTCCGACAGACTCTCCA CGGATCGGCTAAAACTCGGCAAATATTTCGTGCAGGATGACTTGTTGAAG TCGGTAGCGCCCATTCGGAGAGAGCTCGACCGAGTTGGCTCGAGCTCCTA CGCAACAAATGTAAGGTTGAAAATAACATTATAATGATGTGCGTGTTGTA TTTTTAATTGGATTGAGCGAACACGACAGTCGGTGAAGGTTGAGTCCATC CGAAGCATCCGCTGTTTTCCTAACGTATGTTTCCTAATTTCGTTCTTCAA ACCCCCTCTATGTTGGCAATCGTTGCTCTCAGGAACTGATTGCCGAAAGT CGTGCGAGTGCCGTCTACGTCACTGTCACGCTGTCGTCGGGTGCAGACGT CGCGAGCTTCCTCGCAAGCATGACACAGCAGCCAGACGACCAAGTAGACG AGTGCTGTCCAATTCCGGACGAGGCTGTGGCAGCTGATCTGACTGACACG ACCATGTTCGGAACAACATCGTTGCTCTCGTTTTCCGGGCTAGTTGAAAA CGTGCCAATCGATGCTGTAGTAAAAGTAATCTACAAATATAAGGAGTCAA ATGCAAGCCATATTGTTGTAATCGGACCCGATGGTTTCCAAATGTGCAGC TGCTTGCAGGTTTTGAGGCGCGGGCTACCGTTCAGGCGCACTGTAGCAGC ACTCGTAACCAAGCCCAAACTGGCCAATGAGATCAAAGGGGAGTCCATTC ACCCCGGTGGCGATCTTCCATACAGCCATGGTTAGAGGGTTTTGGACTCA GTGACTTCAACGGTCATGAGCGCGGTCCGTACTCGGCGGGGGTTCACTGG GGACCAAGAAGGCTTCGATTGTAGAGAAGATAAAGGAACCAGCGGAAACA TTAGTGCGGCATCTGTCACTAGAGGGAGGCTCTTGGCAAACCTGATTGAG ATGGCGTCCAAGGGCGCCAGAACACTTGATAATTTAGACGAGAAAAAAGT GCTATCGAGCGATTGACCCATTTTTTTTGCTACGCTCAACCGCGATATAG ACACGTACGTGAAGGTAGCATCTGGGGGTACGGGGGGGCTTTCCGGGCTG GGCAACCCGTCAATGTCCATCACTAAGAGCCGTAGAGGGAGCAGATTTAA AGACTGCACTGAGGGCCACGCGCCAAAGAAGGCTAGAGTTGGGCCTGCAG AATAACCCTCCTTGGATGTGTGCGAGATGTTTGAAACAATAATTTACAAT GCTTTGAGGGACCTACCGCGTTAAAAAAAAAGGGCAGACTTCGATTGTGG AGAAGAGGGGGGAACTATTATAGCGGAAACAGTAGTGCGGCATCTGTCAC TAGAGGAAGGCTCTTGGGAAACCTTACTGAGACGGCGTCCAGAGGCGCGA GAACACTCATTGACAATCTAGGCGAGAAAAAAGTGTTATCGAGCTTCAAG GGAGCAGCATCTGTGGGTACGGAGGGGGCTTTCCGGGATGGGCAACCCGC CAATGCCCGTCACTTAGAGCCGTAGAGAGAGCAGATTTAAAGACGGCAAT GAGGACCATGCGCCAAAGAAGACGAGAGTTGGGCCTGCCGAATAACCCCC TTTGGATGTGTGCGAGATTTTTAAAACAAACATTTACATTGCTTTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1432:123151..126247+

>mRNA_F-serratus_M_contig1432.3100.1 ID=mRNA_F-serratus_M_contig1432.3100.1|Name=mRNA_F-serratus_M_contig1432.3100.1|organism=Fucus serratus male|type=CDS|length=2052bp|location=Sequence derived from alignment at F-serratus_M_contig1432:123151..126247+ (Fucus serratus male)
ATGACCTGCGCCGTGTCAGCCATTTTCCCCGGTACTACGCACCTTCACTG
CCTTTGGCACATCACGATAAACATCAGAAAACTGTGCCAAGGAGCGCTGG
AGAGTGGAGCAGGCATTTTGGTGAGGCTGGTCGAGACAGCAGCGTTCGCC
ACCTCGGAAAACATGACCTGCGCCGTGTCAGCCATTTTCCCCGGTACTAC
GCACCTTCACTGCCTTTGGCACATCACGATAAACATCAGAAAACTGTGCC
AAGGAGCGCTGGAGAGTGGAGCAGGCATTTTGGTGAGGCTGGTCGAGACA
GCAGCGTTCGCCACCTCGGAAAACGTGCACCCACCGCCACGCTATCCATG
GAAACGTGTTCCGTGTCCGGGATTTGACGCCATCTGGACCAAAGCGACCG
ACCACGTCAAGGGCACCAAGTGCGAGGGGTGCACCCACCGCCACGCTATC
CATGGAAACGTGTTCCGTGTCCGGGATTTGACGCCATCTGGACCAAAGCG
ACCGACCACGTCAAGGGCACCAAGTGCGAGGGGCAAAGGAAGTATTGGGC
GCGCTGCTTCCACCCAACGGTCATGACCTTGGACATGACGGCATCTCAGC
GAGTCGAGGGCATTCTCGGTGTGATAAAGAGAGGACGCTTCATCAGTAGG
CGCTCTTCTCTCGCTGGGATGCGAGCGGAACTGCAGAAGCGAACGGAAAA
GATCGCTGTCGCGTCTCGGCTGCAAAGGAAGTATTGGGCGCGCTGCTTCC
ACCCAACGGTCATGACCTTGGACATGACGGCATCTCAGCGAGTCGAGGGC
ATTCTCGGTGTGATAAAGAGAGGACGCTTCATCAGTAGGCGCTCTTCTCT
CGCTGGGATGCGAGCGGAACTGCAGAAGCGAACGGAAAAGATCGCTGTCG
CGTCTCGGCTACTCTCCACGGATCGGCTAAAACTCGGCAAATATTTCGTG
CAGGATGACTTGTTGAAGTCGGTAGCGCCCATTCGGAGAGAGCTCGACCG
AGTTGGCTCGAGCTCCTACGCAACAAATACTCTCCACGGATCGGCTAAAA
CTCGGCAAATATTTCGTGCAGGATGACTTGTTGAAGTCGGTAGCGCCCAT
TCGGAGAGAGCTCGACCGAGTTGGCTCGAGCTCCTACGCAACAAATGAAC
TGATTGCCGAAAGTCGTGCGAGTGCCGTCTACGTCACTGTCACGCTGTCG
TCGGGTGCAGACGTCGCGAGCTTCCTCGCAAGCATGACACAGCAGCCAGA
CGACCAAGTAGACGAGTGCTGTCCAATTCCGGACGAGGCTGTGGCAGCTG
ATCTGACTGACACGACCATGTTCGGAACAACATCGTTGCTCTCGTTTTCC
GGGCTAGTTGAAAACGTGCCAATCGATGCTGTAGTAAAAGTAATCTACAA
ATATAAGGAGTCAAATGCAAGCCATATTGTTGTAATCGGACCCGATGGTT
TCCAAATGTGCAGCTGCTTGCAGGTTTTGAGGCGCGGGCTACCGTTCAGG
CGCACTGTAGCAGCACTCGTAACCAAGCCCAAACTGGCCAATGAGATCAA
AGGGGAGTCCATTCACCCCGGTGGCGATCTTCCATACAGCCATGGTTAGG
AACTGATTGCCGAAAGTCGTGCGAGTGCCGTCTACGTCACTGTCACGCTG
TCGTCGGGTGCAGACGTCGCGAGCTTCCTCGCAAGCATGACACAGCAGCC
AGACGACCAAGTAGACGAGTGCTGTCCAATTCCGGACGAGGCTGTGGCAG
CTGATCTGACTGACACGACCATGTTCGGAACAACATCGTTGCTCTCGTTT
TCCGGGCTAGTTGAAAACGTGCCAATCGATGCTGTAGTAAAAGTAATCTA
CAAATATAAGGAGTCAAATGCAAGCCATATTGTTGTAATCGGACCCGATG
GTTTCCAAATGTGCAGCTGCTTGCAGGTTTTGAGGCGCGGGCTACCGTTC
AGGCGCACTGTAGCAGCACTCGTAACCAAGCCCAAACTGGCCAATGAGAT
CAAAGGGGAGTCCATTCACCCCGGTGGCGATCTTCCATACAGCCATGGTT
AG
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