mRNA_F-serratus_M_contig1432.3100.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI) HSP 1 Score: 357 bits (915), Expect = 1.590e-110 Identity = 225/555 (40.54%), Postives = 309/555 (55.68%), Query Frame = 3
Query: 12 EQRLLARQYGGVIIPDNICLTNRYHLKLCLIIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGYPQVIIADVDAAMTCAVSAIFPG--TTHLHCLWHITINIRKLCQGALESG-AGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG--------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASM-TQQPDDQVDE-------------CCPIPDEAVAAD-LTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYK-ESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHPGGDLPYSHG*RVLDSVTSTVMSAVRTRR-----------GFTGDQEGFDCRED-KGTSGNISAASVTRGRLLANLIEMASKGARTLDNLDEKKVLSSD*PIFFATLNRDIDTYVK 1559
EQ LLAR YGGV+I DN CLTNRY+ KLCL +GVDSE + Q F + ++ + ICGG+P+VII D DAAM ++ +FP TTHL C WHI NI+K C L+S L+R A+ ATS FD +WT D VKGT CE +RK+WARCFHPTVMTLDMT+SQRVEG V+K+GR + R S+ +RA+ ++ ++ +AS + +T + LGK +V++D+ KS+ + VG+S YA E+ AE AS+ Y T ++ G D FL ++ T+ +D D CC +P E D DTTMFGTTSL SF LVE V ID +VKV+YK+K + H+V++GP GFQ+C+CLQ+LRRGL R +AALVT+ K ++E KG+SIHP R SV ++ V+ GFTGD E ED +G + ++S SV RGR ANL E+ ++ RT + + ++D F L R ++ +V+
Sbjct: 73 EQILLARTYGGVVIQDNTCLTNRYNNKLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGGHPKVIITDSDAAMKESIRGVFPPPHTTHLLCSWHICKNIKKKCLSILKSEKCADLLRRWTRASLATSIEA---------------FDGVWTDVEDLVKGTDCEEYILKFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKGRVLRRNSTFRQVRAKCEQIAGELRLASTMQATKQTSLGKGYVENDVKKSMEKVMTAYAEVGASKYAKEEIWAEMLASSAYDTSIVTEGRDSMQFLQNLATRSVNDSNDSTNVSGHDHGAGDVCCQVPKEVFEEDEAPDTTMFGTTSLHSFCRLVECVEIDCIVKVLYKHKPDRKVGHLVIVGPGGFQLCTCLQLLRRGLQCRHVLAALVTRLKRSDEFKGQSIHP----------RWRSSVEPWSIAEVKLGTFDGDGDGSYDGGFTGDWEPSGDFEDLQGDNTSVSVLSVLRGRAFANLTELCNRAVRTYTDSMTRDSTTAD-QSMFGDLMRHVNDFVE 601
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE) HSP 1 Score: 318 bits (814), Expect = 1.090e-94 Identity = 225/618 (36.41%), Postives = 309/618 (50.00%), Query Frame = 3
Query: 6 TAEQRLLARQYGGVIIPDNICLTNR------------------------------------YHLKLCLIIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGYPQVIIADVDAAMTCAVSAIFPGTT-HLHCLWHITINIRKLCQGALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG--------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSG-ADVASF---LASMTQQPDDQVDECCPIPDEAVAADLT-DTTMFGTTSLLSFSGLVENVPIDAVVKVIYKY----KESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHPG---GDLPYSHG*RVLDSVTSTVMSAVRT-RRGFTGDQEGFDCREDKGTSGNISAASVTRGRLLANLIEMASKGA-RTLDNLDEKKVLSSD*PIFFATLNRDIDTYVKVASGGTGGLSGLGNPSMSITKSRRGSRFKDC--TEGHAPKK 1676
T +Q++ ARQ+GG+++ DN LTNR Y + L IGVDSE + Q F ++ + ICGG P+VII D DA MT AV P TT HL+CLWH+ N+RK C AL A RL+ AAFA +E W++ HVKG+ CE ++W+RCF PT MTL+MTA+QRVEG+ V+K+GR ++RR SL ++AEL+KR +AS LLST LG+ + D +LK+ + R+L VG+S+YA NE++AE RASA Y T L+ AD A+ L + ++ C +P EA D TM+GTTSL SF+ LV NV I+AVV+V YKY + SHIVV+GP GFQ+C+CL+++R GLP AALVT+ A++ G SIHP + +S L +V T GFT D G D D + N S A TR + + I MA + A + LD ++ ++ G + GL+GLGNP +++ R+ +R KD TEG PKK
Sbjct: 92 TGQQQVFARQWGGIVLQDNTALTNRVLVLIRLIFATGKMSDEHPVRLRFIQPRAFASRSCRYGMHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQPEVIITDADAGMTHAVETFLPSTTVHLYCLWHVMKNVRKNCARALGKKASRFYRLLHAAAFAATEEA---------------CSDAWSEIFRHVKGSDCEEYVTGHLLRHHRHWSRCFFPTTMTLNMTATQRVEGMFSVLKKGRIVNRRCSLVRVKAELEKRIAGFTLASNLLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYAVNEMVAEMRASAAYDTAVLTDKQADDAACHDCLDGLAERGGRTEGYCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRWRKSVVEWS-----LRNVALGTFDGHETFTGGFTEDFGGGDFDGDSQDTLNTSVA-YTRKKAYVDYIAMAQQWANQAAATLDGTPAAYQAYCAMVERQRHEVQALLR-GPGPSDGLAGLGNPPIALPNDRKETRHKDAAGTEGGRPKK 687
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE) HSP 1 Score: 280 bits (715), Expect = 6.920e-77 Identity = 184/497 (37.02%), Postives = 248/497 (49.90%), Query Frame = 3
Query: 12 EQRLLARQYGGVIIPDNICLTNRYHLKLCLIIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGY--------------PQVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQGALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCE--------GQRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRL-------------------------------------------------------LSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQP---DDQVDECCPIPDEAVAADL-TDTTMFGTTSLLSFSGLVENVPI---DAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHP 1250
EQ +LAR YGG++I DN CL NRY KLCL +GVDSE + Q + L++I GG PQVII D DAAMT +V+ + P T HL+ WHI+ N+++ C G + + ++R A+FATS F+ IW + V+GT CE QRK+WARC HPT MTL MTASQRVEG VIK G + + S+ +R ++ E +A+ASR+ LST L ++DD+ K++ P+ +E ++ G+S+YA E++AE AS Y T L G + FL + QP D D CC +P + DT+MFGTT L SF LV +V I DAVVKV+YK ++ H+VVIGPDGFQ+C+CLQ++RRGL R +AALVT+ A+E KGE IHP
Sbjct: 846 EQIMLARTYGGIVIQDNTCLINRYDFKLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGGTQSHHLLPTPPTPHPPQVIITDADAAMTSSVAELMPHTKHLYSSWHISKNLKRKCGGEVFAD---VIRRYTAASFATSMKA---------------FERIWNNLKEVVEGTPCEEYINGYLFDQRKHWARCCHPTTMTLGMTASQRVEGSFSVIKNGGAVRKNSTFGAVRKRVETVAEDLALASRMWVSRGVKARVALYHIFILIHCIGMYGLLRGVSHTVEPASFTITSITAVRCLSPCRLSTKAGSLRFAHMEDDVKKAIEPVMKEYEKAGASTYARREIMAEMVASDSYDTTVLVKGRESKRFLEDLAAQPSNNDGNGDVCCQVPADVFDGKKHPDTSMFGTTCLQSFYRLVAHVDIYMGDAVVKVVYKRRK--VGHLVVIGPDGFQLCACLQLMRRGLQCRHVLAALVTELDRASEFKGEFIHP 1322
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE) HSP 1 Score: 154 bits (388), Expect = 5.200e-35 Identity = 125/340 (36.76%), Postives = 174/340 (51.18%), Query Frame = 3
Query: 705 RLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSG-ADVASF---LASMTQQPDDQVDECCPIPDEAVAADLT-DTTMFGTTSLLSFSGLVENVPIDAVVKVIYKY----KESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHPG---GDLPYSHG*RVLDSVTSTVMSAVRT-RRGFTGDQEGFDCREDKGTSGNISAASVTRGRLLANLIEMASKGA-RTLDNLDEKKVLSSD*PIFFATLNRDIDTYVKVASGGTGGLSGLGNPSMSITKSRRGSRFKDC--TEGHAPKK 1676
R LST LG+ + D +LK+ + R+L VG+S+YA NE++AE RASA Y T L+ AD A+ L + ++ C +P EA D TM+GTTSL SF+ LV NV I+AVV+V YKY + SHIVV+GP GFQ+C+CL+++R GLP AALVT+ A++ G SIHP + +S L +V T GFT D G D D + N S A TR + + I MA + A + LD ++ ++ G + GL+GLGNP +++ R+ +R KD TEG PKK
Sbjct: 701 RRLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYAVNEMVAEMRASAAYDTAVLTDKQADDAACHDCLDGLAERGGRTEGYCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRWRKSVVEWS-----LRNVALGTFDGHETFTGGFTEDFGGGDFDGDSQDTLNTSVA-YTRKKAYVDYIAMAQQWANQAAATLDGTPAAYQAYCAMVERQRHEVQALLR-GPGPSDGLAGLGNPPIALPNDRKETRHKDAAGTEGGRPKK 1033
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.370e-32 Identity = 141/513 (27.49%), Postives = 216/513 (42.11%), Query Frame = 3
Query: 102 IIGVDSEKQVAGLGQSFPL*RADGLI*VRSEPLVKICGGY-PQVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQGAL--ESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGA-------------------DVASFLASMTQQ--PDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVT-------KPKLANEIKGESIHP-------GGDLPYSHG*RVLDSVTSTVMSAVRTRRGFTGDQEGFDCREDKGTSGNISAASVTRGRLLANLIEMASKGARTLDNLDEKKVLSS 1505
++GVD E + LGQ E GG P+V++ D D AMT A+ + T HL CLWH+ N+ K C + + ++RL +AA+A + R +++ VKG KCE + WA PT++T+ M A+QR EG+ GV KR + ++ SL G+ +LQ +K+ V ++T + F L API+ EL RVG+S Y E AE S Y + +GA + F S+ ++ PD +++ C EA + + D++++ TSL + L+ +P+ V YK + H+VV GP+GF +CSCL++LR GL R A LV L + G S+H G D P++ S V+ G+ G +EG D T + A E A+K A DE++V +S
Sbjct: 1 MVGVDDENRSCVLGQGVLRSECKETFQWFLEAYETAAGGRRPKVMLTDADRAMTSALEE-WTTTLHLFCLWHVFKNVLKNCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKI---------------VKGKKCEEYMDALIQDKTKWAFSCRPTLLTMGMVATQRTEGMFGVAKRS-GVHKKLSLCGLWEKLQLMYQKMDVEYSRVATRGVGAELPFQTKHLQGIFAPIQEELKRVGASQYCQVEARAEVGGSQSYDVEVICAGATDDDGRPDPLGEGVLRRKLEAVRFDLSLFEEAKPDTDLEKDCMRGPEAESTE--DSSVWARTSLEALLDLIGELPVHVAAAVRYKLTPARPGHVVVFGPNGFHLCSCLKLLRHGLVCRHYFAVLVRFLGCRFKGILLDHRFDGNSLHARWRQSLDGNDEPWT---------VSRVLKETGHGDGWDGCEEGADDNFWGPTFDDDDAGDGVHPS------ERAAKAAAARSATDERRVFAS 479
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.000e-30 Identity = 105/331 (31.72%), Postives = 151/331 (45.62%), Query Frame = 3
Query: 279 FPGTTHLHCLWHITINIRKLCQG--ALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASF--------------LASMTQQPDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALV 1202
+PGT HLHCLWH+ N+ K C A +++ A+A + V F + V G KCEG + WA C PTV+TL M A+QR EG+ GV K + ++ SL + LQ+ ++ IA+ + L+T L G F + P+++EL G+S Y A+S + + + + D F L + P D E + EA D TM+ TSL +F L+E++PI+ VV V YK+ + SH+VV GP F +CSCLQ+LRR LP R A LV
Sbjct: 681 WPGTMHLHCLWHVFKNVLKNCSSSFAYNDDKTDMMQCFRNEAYAATPEV---------------FGTQVARLEQLVAGKKCEGYIADLIKNKTKWAFCCRPTVLTLGMVATQRTEGLFGVAKSS-GVEKKLSLCALWDRLQRLSKMIAIETARLATPPLGAGVAFGDIHVENFFRPVKQELLACGASQYCQQVDEAQSYDAELVSSGRVEENGDPLPFHENDLAKIRSLRLKLNVLQVAPPDTDLEGDQLAGEAAV----DNTMWARTSLSAFLDLIEDIPIELVVAVRYKWTANRPSHLVVFGPHNFHLCSCLQLLRRRLPCRHYFAVLV 991
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5L372_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L372_9PHAE) HSP 1 Score: 112 bits (279), Expect = 2.410e-22 Identity = 111/407 (27.27%), Postives = 155/407 (38.08%), Query Frame = 3
Query: 225 QVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQG--ALESGAGILVRLVETAAFATSENVHPPPRYPWKRVPCPGFDAIWTKATDHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQK--RTEKIAVASRLLSTDRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQPDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVT---------KPKLANEIKGESIHPG-------GDLPYSHG*RVLDSVTSTVMSAVRTRRGFTGDQEGFD 1364
QVI+ D D AMT A+++ +PGT HLHCLWH+ N+ K C A ++R AFA + V F + V G KCEG + WA C TV+TL M A+QR + AEL R E+ L D K+ ++ ++L+ VAP +L+ G +A A D TM+ TSL +F L+E++PI+ V V YK + SH+VV G F +CSCLQ+LRRGLP R A LV + + G +H D P+S S+V+S+ G+ G+ EG D
Sbjct: 51 QVILTDADLAMTAAIASCWPGTLHLHCLWHVFKNVFKNCSSSFATNDDKTDMMRCFRNEAFAATPEV---------------FGTQVARLEQLVAGKKCEGYIADLIKNKTKWAFCCRSTVLTLGMVATQRSPKV-------------DEAQAYDAELVSSGRVEENGDPLPLHEHDLAKIRSLRLKLNILQ-VAPPNTDLE-----------------------------GDQIAGEAA-------------------------VDNTMWARTSLSAFLDLIEDIPIELFVAVRYKRAANRPSHLVVFGLHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREVVNDSPWS---------ISSVLSSSGHSVGWDGNDEGRD 365
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5KKN6_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN6_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.110e-21 Identity = 102/377 (27.06%), Postives = 145/377 (38.46%), Query Frame = 3
Query: 204 KICGGYPQVIIADVDAAMTCAVSAIFPGTTHLHCLWHITINIRKLCQGALESGAGI--LVRLVETAAFATSENV---------HPPPRYPWKRVP---------------------CPGFDAIWTKAT---DHVKGTKCEG-------QRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLST-DRLKLGKYFVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQPDDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVT 1205
+ C G VI+ D D AMT A+++ +PGT HLH LWH N+ K C + + ++R AAFA + V H P W +P C + T+ V G KC+G + WA C PTV+TL M A+QR EG E Q ++ + R+ D L L ++ +L ++ S N L PD ++ D+ D TM+ TSL + L+E++PI+ VV V YK+ + SH+VV GP +CSCLQ+LRRGLP R A LV+
Sbjct: 35 RACCGL-SVILTDADLAMTAAIASCWPGTLHLHSLWHGFKNVLKNCSSSFANNDDKTDMMRCFRNAAFAATPEVRWQSLVRCRHTTPPREWIGLPHQFAPPQRAVNITFDVSCVYHCIRWHVFGTQVARLEQLVAGKKCKGYIADLIKNKTKWAFCCRPTVLTLGMVATQRTEG----------------------EAQSYDAELVSSGRVEENGDPLPLYEH---------------DLAKIRSLCLKLNIL---------------------------QVAPPDTDLEG-----DQLAGEAAVDNTMWAPTSLSASLDLIEDIPIELVVAVRYKWTPNRPSHLVVFGPHNLHLCSCLQLLRRGLPCRHYFAVLVS 341
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5K6K4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K4_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.400e-21 Identity = 59/119 (49.58%), Postives = 69/119 (57.98%), Query Frame = 3
Query: 903 FLASMTQQP---DDQVDECCPIPDEAVAADLTDTTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNASHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAALVTKPKLANEIKGESIHP 1250
FL +T P D D CC +P EA T FG L SF LV NV IDA VKV YKY+ SH+VV+GPD FQMC+CLQV+RRG R +AALV + +E G SIHP
Sbjct: 31 FLEDLTAHPSNRDGNGDVCCEVPREAFDGKDNPETKFGAICLQSFFRLVANVKIDAGVKVSYKYRSPTVSHLVVLGPDRFQMCTCLQVMRRGWQCRHVLAALVRSNR-DSEFAGASIHP 148
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Match: A0A6H5KQW8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQW8_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 3.110e-17 Identity = 78/246 (31.71%), Postives = 127/246 (51.63%), Query Frame = 3
Query: 495 HVKGTKCEGQRKYWARCFHPTVMTLDMTASQRVEGILGVIKRGRFISRRSSLAGMRAELQKRTEKIAVASRLLSTDRLKLGKY-----FVQDDLLKSVAPIRRELDRVGSSSYATNELIAESRASAVYVTVTLSSGADVASFLASMTQQPDDQVDECCPIPDEAVAADLTD-----TTMFGTTSLLSFSGLVENVPIDAVVKVIYKYKESNA-SHIVVIGPDGFQMCSCLQVLRRGLPFRRTVAAL 1199
H + C +R+ WA CF+P +TL +T++QRVE + V+K ISR SSL+ + A L+ K+ + S + D++ L K+ V +LK PI + L ++G+S+YA + +E+ A+ Y T L+ G+D + L + + V PD ++ D TM+ TSL +F L+ I V K+ ++ ++ +H+VV GP GF +CSCL +L G R +A L
Sbjct: 195 HPQTFYCGRKREKWAFCFNPGALTLGITSTQRVERMNAVLKH--LISRYSSLSRLDAALETVEAKLHLESERGNNDKV-LMKHPTWSSGVLGTMLKFFEPIGQALKQLGASNYALDVTKSEAVAAMTYATERLAQGSDAVTTLLPTLSRGEGGV-RFATAPDSRDLPNIDDDGGDDATMYARTSLPAFCALLHGQDITEVYKISFRSGGADGRAHLVVTGPGGFYLCSCLHLLHTGRFCRHFLAVL 436 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1432.3100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1432.3100.1 >prot_F-serratus_M_contig1432.3100.1 ID=prot_F-serratus_M_contig1432.3100.1|Name=mRNA_F-serratus_M_contig1432.3100.1|organism=Fucus serratus male|type=polypeptide|length=342bp MTCAVSAIFPGTTHLHCLWHITINIRKLCQGALESGAGILVRLVETAAFAback to top mRNA from alignment at F-serratus_M_contig1432:123151..126247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1432.3100.1 ID=mRNA_F-serratus_M_contig1432.3100.1|Name=mRNA_F-serratus_M_contig1432.3100.1|organism=Fucus serratus male|type=mRNA|length=3097bp|location=Sequence derived from alignment at F-serratus_M_contig1432:123151..126247+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1432:123151..126247+ >mRNA_F-serratus_M_contig1432.3100.1 ID=mRNA_F-serratus_M_contig1432.3100.1|Name=mRNA_F-serratus_M_contig1432.3100.1|organism=Fucus serratus male|type=CDS|length=2052bp|location=Sequence derived from alignment at F-serratus_M_contig1432:123151..126247+ (Fucus serratus male)back to top |