mRNA_F-serratus_M_contig1430.3095.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1430.3095.1
Unique NamemRNA_F-serratus_M_contig1430.3095.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: D8LPW9_ECTSI (Putative S-adenosylmethionine-dependent methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW9_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 2.190e-150
Identity = 219/284 (77.11%), Postives = 252/284 (88.73%), Query Frame = 1 
Query:  517 DDGDFENDRRYRRKPRRSGLRRDDAGLPTEKVYAPRISAYGKPTATGGSGGTKRVRPQGEERDRSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGFADQANAVRGDVFDVLYNPRKFGLDAPYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGEGSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSIRKK 1368
            DD  F  D+RYRRK R + LRRDD GLP+EK+YAPR SAYG PT  GG+G   +VRPQGEER+ S+NNAA+L+VAGG+ KGRRLESPDVFLRPMM KVKEALFSTL GFGVFET + RFLDLFSGSGSVG+EALSRGAGHATFVDFAKDCC+V LRNA  CGF+DQA AV+GDV DVLYNPR++GLDAP+DV+ VTPPYEEVVY +LVKAL+ SDLVA+DT+VV+EYPVELGC+P AIG+G+MVGLRNRRYGRTV+GVWVYLP+GQ  D+LD+RPEEFVSI+KK
Sbjct:   81 DDESFAEDQRYRRKARGANLRRDDTGLPSEKIYAPRQSAYGTPTV-GGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQAKAVKGDVMDVLYNPRRYGLDAPFDVITVTPPYEEVVYTELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIKKK 363
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: A0A835Z8R5_9STRA (Putative S-adenosylmethionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R5_9STRA)

HSP 1 Score: 352 bits (903), Expect = 2.290e-113
Identity = 181/274 (66.06%), Postives = 215/274 (78.47%), Query Frame = 1 
Query:  553 RKPRRSGLRRDDA-GLPTEKVYAPRISAY-GKPTATGGSGGTKRVRPQGEERDRSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGFADQANAVRGDVFDVLYNPRKFGLDAPYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGEGSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSIRKK 1368
            R+PR + L+RD+  GLP E VYAPR S Y  K   +G SGG+KRVR QG ER+  LNNA +LRV GG+ KGRRLESP+V+LRPMMGKVKEAL++TL  FG+FE    RFLDLF GSGSVGVEALSRGA H TFVD A +CC V+ RNA++CGF  Q +AVRGDV  VL  P  FGLDAPYDVV +TPPY EVVYGDL+ A A+S LV  DTIVV+EYPVELGCLP  IG+G +VGLRNRRYGRTV+GV++  PTG+   L D+RPEEF+S++K+
Sbjct:   79 RRPRGAHLKRDEVTGLPIEAVYAPRFSPYLTKKKLSGTSGGSKRVRAQGSEREEGLNNAQRLRVLGGVAKGRRLESPEVYLRPMMGKVKEALYNTLLSFGLFEGAGPRFLDLFCGSGSVGVEALSRGASHVTFVDLAAECCAVAERNAVACGFEGQGSAVRGDVLRVLSQPSAFGLDAPYDVVTITPPYAEVVYGDLIAAAASSPLVREDTIVVIEYPVELGCLPHVIGDGRLVGLRNRRYGRTVLGVYICRPTGRLY-LADSRPEEFISLKKQ 351
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: A0A6V1VNJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VNJ1_HETAK)

HSP 1 Score: 270 bits (689), Expect = 5.410e-82
Identity = 131/230 (56.96%), Postives = 177/230 (76.96%), Query Frame = 1 
Query:  676 RVRPQGEERDRSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGFA-DQANAVRGDVFDVLYNPRKFGLDAPYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGEGSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSIR 1362
            R+R QG++R+   NN  KLRV GG+ +GR++ESPDVFLRPMMGKVKEALFS+L+  G+F++G+ + LDLFSGSGSVG+EALSRGA +A FVDFAK+CCEV+++N ++ GF   Q  AV   V+D L +P ++G D  +D+V VTPPYEEVVY DLV+A+A S  V  D +VVLEYPVELG LP  +G+G ++GLRN+RYGRTVI  ++  P+G+ +   + +PEEF  ++
Sbjct:   86 RIRAQGKKREGGFNNPNKLRVMGGIARGRKIESPDVFLRPMMGKVKEALFSSLTNMGLFDSGSAKALDLFSGSGSVGIEALSRGASYACFVDFAKECCEVAMKNVVNVGFEPQQGQAVCASVYDFLADPARYGADHRFDLVTVTPPYEEVVYADLVQAVADSPAVGEDCVVVLEYPVELGSLPHLLGDGRLIGLRNKRYGRTVIATYIKNPSGKLE--YNPKPEEFERLK 313
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: A0A7S1Z804_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z804_TRICV)

HSP 1 Score: 252 bits (644), Expect = 1.030e-74
Identity = 134/279 (48.03%), Postives = 182/279 (65.23%), Query Frame = 1 
Query:  589 AGLPTEKVYAPRISAYGKPTATGGSGGTKRVRPQGEERDRSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETG-NTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGF---------------ADQANAVRGDVFDVLYNPRKFGLD--APYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGE---GSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSIR 1362
            A  P+     P  ++  +    GGS G+  +RPQG ERD  LNN + LR+ GG  +GR+L+SP+V+LRPMMGKV+EA+FST + FG+++ G N R LD+F+GSGSVG+E+LSRGAGH TFVDFA DCC+   RN   CGF                ++   VR D    L +P   G+     Y +V + PPYEEVVY DL++A+  S LV  DT++++EYPVELGCLP  I     G ++G+RNR+YGRTVI ++V  PTG+ + +  +RPEEFVS+R
Sbjct:   84 ASRPSLGHVVPSSASSSRTKKRGGSAGSA-LRPQGRERDVGLNNPSNLRILGGTARGRKLDSPEVYLRPMMGKVREAVFSTFTSFGLYDRGSNVRHLDIFAGSGSVGLESLSRGAGHVTFVDFADDCCDAVERNVKRCGFDVDEDDDDGTGRRAGTERTRVVRADYLRALRDPESVGIPPLTTYGIVTLCPPYEEVVYADLIEAVCNSRLVTDDTVIMIEYPVELGCLPHVITREDGGKVIGVRNRKYGRTVIAMYVVNPTGRME-VASSRPEEFVSLR 360
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: A0A7S2H4B1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H4B1_9STRA)

HSP 1 Score: 245 bits (626), Expect = 8.700e-72
Identity = 123/252 (48.81%), Postives = 176/252 (69.84%), Query Frame = 1 
Query:  625 ISAYGKPTATGGSGGTKRVRPQGEERDRSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGFADQANAVR--GDVFDVLYNPRKFGLD--APYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGE---GSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSI 1359
            I ++ K    GGS   K +RPQG+ R+  +NN + LR+  G  +GRRL+SP+V+LRPMMGKV+EA++ST + FG+++  +TR LD+FSGSGSVG+E+LSRGA H +FVD ++DCC+   RN   C F ++  A    GD    L +P   G+    P+ VV + PPYEE+VY DL++A+A S LV  DTI+++EYPVELGC P  I     G++VG+RNR+YGRTV+ +++  PTG  + + ++RPEEFVS+
Sbjct:  133 IPSHTKNRGEGGSSNPK-LRPQGKAREAGMNNPSNLRIMAGTARGRRLDSPEVYLRPMMGKVREAVYSTFTSFGLYDGDSTRHLDIFSGSGSVGLESLSRGASHCSFVDLSRDCCDAVERNLKWCNFEEEGKAAVYCGDAIRALSDPASMGIPDHLPFQVVTLCPPYEEIVYADLLEAVANSSLVTDDTIILIEYPVELGCFPHVIQRKDGGALVGVRNRKYGRTVVAMYIVNPTGNME-VAESRPEEFVSV 382
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: B8BT17_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT17_THAPS)

HSP 1 Score: 239 bits (609), Expect = 3.480e-71
Identity = 125/241 (51.87%), Postives = 164/241 (68.05%), Query Frame = 1 
Query:  688 QGEERDRS-LNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFE-----------TGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGFADQANAVRGDVFDVLYNPRKFGLD--APYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGE---GSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSI 1359
            QG  RD    NN + LR+ GG V+GR+LESP V+LRPMMGKVKEA++ST + FG++E           T +TR LD+FSGSGSVG+E+LSRGA H TFVD + DCC    RN + CG    A  V  D F  L  P   G+D    YD+V + PPYEE+VY DL+ A+A S+LV  DT++++EYPVELGCLP AIG    G ++G+RNR+YGRTVI +++  PTG  +   ++RPEEF++I
Sbjct:    1 QGVNRDTERYNNPSNLRILGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGLYENNQNIGGGGTGTCSTRHLDIFSGSGSVGLESLSRGARHCTFVDMSNDCCGACERNIVRCGGEPIAKVVCTDAFRALRQPETVGIDPSCKYDLVTLCPPYEEIVYADLLDAVANSELVTEDTVILIEYPVELGCLPHAIGREDGGVLIGIRNRKYGRTVIAMYIVNPTGARETA-ESRPEEFITI 240
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: A0A7S3PYP8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYP8_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.190e-70
Identity = 120/242 (49.59%), Postives = 172/242 (71.07%), Query Frame = 1 
Query:  655 GGSGGTKRVRPQGEERDRSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGFAD--QANAVRGDVFDVLYNPRKFGLDA--PYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGE---GSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSI 1359
            GGSGG K +R QG+ R   +NN + L++ GG  +GR+++SP+V+LRPMMGKVKEA++ST + FG+++   TR LD+FSGSGSVG+E+LSRGA H TFVD A+DCCE S RN    GF +      +  D    L +P   G+     Y++V + PPYEE+VY DL++A+A S +V  DT++++EYP+ELGCLP  I     G+++G+RNR+YGRT+I ++V  PTG+ D   ++RPE+FVS+
Sbjct:  116 GGSGGPK-LRAQGKSRADGMNNPSNLKILGGTARGRKIQSPEVYLRPMMGKVKEAVYSTFTSFGLYDGVATRHLDIFSGSGSVGLESLSRGAAHCTFVDLARDCCETSQRNIDIIGFDEPGMTRVICTDAITALRDPYSVGIPEGFTYNLVTLCPPYEEIVYADLLEAVANSPVVTDDTVILVEYPIELGCLPHVITRDDGGALIGVRNRKYGRTIIAMYVVNPTGRLDSSAESRPEDFVSL 356
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: I2CS21_NANGC (N6-adenine-specific methylase (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CS21_NANGC)

HSP 1 Score: 236 bits (603), Expect = 1.180e-68
Identity = 140/302 (46.36%), Postives = 190/302 (62.91%), Query Frame = 1 
Query:  472 SVLRQRMVVSSTVETDDGDFENDRRYRRKPRRSGLRRDDAGLPTEKVYAPR-ISAYG---KPTATGGSGGTKRVRPQGEERDRSLNNAA----KLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGF-ADQANAVRGDVFDVLYNPRKFGLDAPYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGEGSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEF 1350
            S+  Q M +SS  E      + D+R+++K RR  L  D  GLP + ++APR I   G   K    GGS  ++  + QG+  D      A    +LR+ GG  +G+RL+SP+V LRPMM KV+EALFSTL  F +F +   R +DLF G+GSVG+EALSRGAG A FVD A +CCE   RN   C F A +   VR    +VL  P++ G+   +D++ +TPPYEEVVY DL++ +  S  VA D+++V+EYPVELG LP  IG+G ++GLRNRRYGRTV+ ++   PTG+     D RPEEF
Sbjct:   42 SLTVQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPD--GLPVQPIHAPRQIRGAGDARKIHELGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSG--DLRPEEF 339
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BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: K0SD16_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD16_THAOC)

HSP 1 Score: 234 bits (597), Expect = 2.280e-68
Identity = 130/261 (49.81%), Postives = 170/261 (65.13%), Query Frame = 1 
Query:  664 GGTK--RVRPQGEERD-RSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFE-----TGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGF----------------ADQANAVRGDVFDVLYNPRKFGLD--APYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGE---GSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSI 1359
            GGTK  ++RPQG  RD +  NN + LRV GG V+GR+LESP V+LRPMMGKVKEA++ST + FG ++        TR LD+FSGSGSVG+E+LSRGA H TFVD + DCC    RN   CGF                   AN V  D +  L  P   G+D  A YD+V + PPYEE+VY +L+ A+A S LV  DT++++EYPVELGCLP  IG    G ++G+RNR+YGRTVI +++  PTG  +   ++RPEEF++I
Sbjct:   58 GGTKSAQLRPQGLSRDTQRYNNPSNLRVLGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGFYDGVGGQPCTTRHLDIFSGSGSVGLESLSRGAKHCTFVDMSSDCCGACERNIERCGFDGWNEGGIGTEVGDSGEPVANVVCTDAYRALREPETVGIDPEAKYDLVTLCPPYEEIVYAELLDAVANSKLVKEDTVILVEYPVELGCLPHVIGREDGGVLIGVRNRKYGRTVIAMYIVNPTGDRESA-ESRPEEFITI 317
[Close]
BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Match: B7GEJ1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEJ1_PHATC)

HSP 1 Score: 227 bits (579), Expect = 4.160e-67
Identity = 114/216 (52.78%), Postives = 156/216 (72.22%), Query Frame = 1 
Query:  730 LRVAGGLVKGRRLESPDVFLRPMMGKVKEALFSTLSGFGVFETGNT-RFLDLFSGSGSVGVEALSRGAGHATFVDFAKDCCEVSLRNALSCGFADQANAVRGDVFDVLYNPRKFGLDA--PYDVVVVTPPYEEVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGE---GSMVGLRNRRYGRTVIGVWVYLPTGQHDDLLDARPEEFVSI 1359
            LR+A G  KGRRL+SP+V+LRPMMGKV+EA++ST + FG+++   T R LD+F+GSGSVG+E+LSRGA H TFVD ++DCC    RN   C FA +   V G+   VL  P   G+     Y +V + PPYEE+VYGDL++A+A S +V  DT+V++EYPVELGCLP  +     G+MVG+RNRRYGRTVI ++V  PTG+ + +  +RPEEF+++
Sbjct:    2 LRIAAGTAKGRRLDSPNVYLRPMMGKVREAVYSTFTAFGLYDPATTTRHLDIFAGSGSVGLESLSRGAAHCTFVDLSEDCCSAVERNVKWCDFAGKEQIVCGEAIQVLNEPFAAGIPELQTYQLVTLCPPYEEIVYGDLIEAVANSPVVTDDTVVLIEYPVELGCLPHVVRRRDGGAMVGVRNRRYGRTVIAIYVVNPTGRLE-VAYSRPEEFITL 216
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1430.3095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPW9_ECTSI2.190e-15077.11Putative S-adenosylmethionine-dependent methyltran... [more]
A0A835Z8R5_9STRA2.290e-11366.06Putative S-adenosylmethionine-dependent methyltran... [more]
A0A6V1VNJ1_HETAK5.410e-8256.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1Z804_TRICV1.030e-7448.03Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S2H4B1_9STRA8.700e-7248.81Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8BT17_THAPS3.480e-7151.87Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S3PYP8_9STRA1.190e-7049.59Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
I2CS21_NANGC1.180e-6846.36N6-adenine-specific methylase (Fragment) n=2 Tax=N... [more]
K0SD16_THAOC2.280e-6849.81Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7GEJ1_PHATC4.160e-6752.78Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1430contigF-serratus_M_contig1430:165799..170993 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.2
Seed ortholog evalue7.7e-123
Seed eggNOG ortholog2880.D8LPW9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Conserved hypothetical protein 95
EggNOG OGs2QSWU@2759,COG0742@1
Ec32 ortholog descriptionputative S-adenosylmethionine-dependent methyltransferase
Ec32 orthologEc-15_001850.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1871
Cds size1155
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929418.0489774-UTR-F-serratus_M_contig1430:165798..1660141622929418.0489774-UTR-F-serratus_M_contig1430:165798..166014Fucus serratus maleUTRF-serratus_M_contig1430 165799..166014 +
1690962842.649156-UTR-F-serratus_M_contig1430:165798..1660141690962842.649156-UTR-F-serratus_M_contig1430:165798..166014Fucus serratus maleUTRF-serratus_M_contig1430 165799..166014 +
1622929418.1960812-UTR-F-serratus_M_contig1430:170493..1709931622929418.1960812-UTR-F-serratus_M_contig1430:170493..170993Fucus serratus maleUTRF-serratus_M_contig1430 170494..170993 +
1690962842.7373004-UTR-F-serratus_M_contig1430:170493..1709931690962842.7373004-UTR-F-serratus_M_contig1430:170493..170993Fucus serratus maleUTRF-serratus_M_contig1430 170494..170993 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929418.0781264-CDS-F-serratus_M_contig1430:166014..1664331622929418.0781264-CDS-F-serratus_M_contig1430:166014..166433Fucus serratus maleCDSF-serratus_M_contig1430 166015..166433 +
1690962842.665049-CDS-F-serratus_M_contig1430:166014..1664331690962842.665049-CDS-F-serratus_M_contig1430:166014..166433Fucus serratus maleCDSF-serratus_M_contig1430 166015..166433 +
1622929418.0961847-CDS-F-serratus_M_contig1430:166994..1671661622929418.0961847-CDS-F-serratus_M_contig1430:166994..167166Fucus serratus maleCDSF-serratus_M_contig1430 166995..167166 +
1690962842.6771474-CDS-F-serratus_M_contig1430:166994..1671661690962842.6771474-CDS-F-serratus_M_contig1430:166994..167166Fucus serratus maleCDSF-serratus_M_contig1430 166995..167166 +
1622929418.1126745-CDS-F-serratus_M_contig1430:167561..1676241622929418.1126745-CDS-F-serratus_M_contig1430:167561..167624Fucus serratus maleCDSF-serratus_M_contig1430 167562..167624 +
1690962842.686245-CDS-F-serratus_M_contig1430:167561..1676241690962842.686245-CDS-F-serratus_M_contig1430:167561..167624Fucus serratus maleCDSF-serratus_M_contig1430 167562..167624 +
1622929418.127071-CDS-F-serratus_M_contig1430:167848..1679501622929418.127071-CDS-F-serratus_M_contig1430:167848..167950Fucus serratus maleCDSF-serratus_M_contig1430 167849..167950 +
1690962842.6937437-CDS-F-serratus_M_contig1430:167848..1679501690962842.6937437-CDS-F-serratus_M_contig1430:167848..167950Fucus serratus maleCDSF-serratus_M_contig1430 167849..167950 +
1622929418.1380687-CDS-F-serratus_M_contig1430:168189..1682611622929418.1380687-CDS-F-serratus_M_contig1430:168189..168261Fucus serratus maleCDSF-serratus_M_contig1430 168190..168261 +
1690962842.7050622-CDS-F-serratus_M_contig1430:168189..1682611690962842.7050622-CDS-F-serratus_M_contig1430:168189..168261Fucus serratus maleCDSF-serratus_M_contig1430 168190..168261 +
1622929418.1569748-CDS-F-serratus_M_contig1430:169241..1693581622929418.1569748-CDS-F-serratus_M_contig1430:169241..169358Fucus serratus maleCDSF-serratus_M_contig1430 169242..169358 +
1690962842.7159975-CDS-F-serratus_M_contig1430:169241..1693581690962842.7159975-CDS-F-serratus_M_contig1430:169241..169358Fucus serratus maleCDSF-serratus_M_contig1430 169242..169358 +
1622929418.1737454-CDS-F-serratus_M_contig1430:170283..1704931622929418.1737454-CDS-F-serratus_M_contig1430:170283..170493Fucus serratus maleCDSF-serratus_M_contig1430 170284..170493 +
1690962842.7271569-CDS-F-serratus_M_contig1430:170283..1704931690962842.7271569-CDS-F-serratus_M_contig1430:170283..170493Fucus serratus maleCDSF-serratus_M_contig1430 170284..170493 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1430.3095.1prot_F-serratus_M_contig1430.3095.1Fucus serratus malepolypeptideF-serratus_M_contig1430 166015..170493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1430.3095.1

>prot_F-serratus_M_contig1430.3095.1 ID=prot_F-serratus_M_contig1430.3095.1|Name=mRNA_F-serratus_M_contig1430.3095.1|organism=Fucus serratus male|type=polypeptide|length=385bp
MGVIRSPGNRKELSKGISSCCWVLMVANLLVNCRSFQFQPLISHQTSGSP
LQGGSGQGKDTSNRGPPSRGIYPAGLSIGAESNSLSVLRQRMVVSSTVET
DDGDFENDRRYRRKPRRSGLRRDDAGLPTEKVYAPRISAYGKPTATGGSG
GTKRVRPQGEERDRSLNNAAKLRVAGGLVKGRRLESPDVFLRPMMGKVKE
ALFSTLSGFGVFETGNTRFLDLFSGSGSVGVEALSRGAGHATFVDFAKDC
CEVSLRNALSCGFADQANAVRGDVFDVLYNPRKFGLDAPYDVVVVTPPYE
EVVYGDLVKALAASDLVARDTIVVLEYPVELGCLPQAIGEGSMVGLRNRR
YGRTVIGVWVYLPTGQHDDLLDARPEEFVSIRKK*
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mRNA from alignment at F-serratus_M_contig1430:165799..170993+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1430.3095.1 ID=mRNA_F-serratus_M_contig1430.3095.1|Name=mRNA_F-serratus_M_contig1430.3095.1|organism=Fucus serratus male|type=mRNA|length=5195bp|location=Sequence derived from alignment at F-serratus_M_contig1430:165799..170993+ (Fucus serratus male)
TCTCTACCACGGGCTTAAGAATTATGTCGCAATGGATAAGCAGGAGGAAC
ATATGCTTATTGGACCCTTATTTACGAGTATGAAGAATCGGCGGTTTCAC
TGCAAACGCCACGCATATTCCCATGAACACCTTCGAGACTGTCATAAACT
GAAAACACCGTTTCAACGTCGAGCCCACGGGACTTGCTTAGCTGCGCAAC
ACCTGCTTGTGTAATCATGGGAGTCATTCGTTCCCCTGGAAATCGAAAAG
AACTCAGCAAAGGAATAAGTTCTTGCTGTTGGGTACTAATGGTGGCGAAC
CTGCTAGTGAATTGCCGATCCTTTCAATTTCAACCCCTTATATCCCATCA
AACGAGCGGCTCCCCTCTTCAGGGTGGTTCAGGCCAGGGAAAGGATACAA
GTAATCGAGGGCCACCATCCCGAGGCATCTATCCTGCTGGCCTTTCGATC
GGAGCGGAGTCAAACTCCTTGTCAGTTTTGAGGCAAAGGATGGTGGTTAG
CTCCACAGTAGAGACCGACGATGGTGATTTTGAGAACGATCGACGATATC
GGCGCAAGCCTCGCCGGAGTGGGTTGCGCAGAGACGACGCAGGGCTTCCA
ACGGAGAAGGTCTACGCTCCGCGAATAAGCGCCTAGTGAGTCGTTTGCAC
CGAACAAATGACCGCGAATCTTCCGAACACGTCGCTATGTGTAGGACTGT
GCGATTCGACCCGTGACTTATCCGGTTAGCCGAACGTCTTTTAGAACTTG
CAGCCATTGCTTGTGCGACCGACGTAAATACTTGAGCTCCTCTCCAGCCT
CCCCTTCTGCGAAAGCTTTCAAGGCTTGTCGCTTTTGGCATATTTTAAGA
TAAGAGAGGCAACATTACAGTGGAACTGAAGTCAACTTGAGCAGTGGTGA
GTACTCGTGTAGTGCTGCAGGGAAACGGGATATAGAACGCTGCAAAAAGC
GGATGTCGCATCTGGAAGGGGTTGCGCGCGTCTGGCGCAGATTTACGTCG
ACGACTTTGGCGACTTTTAGCGCTGTCAAAGCTTGACACAACACGACGAT
AATACGTACACCAGGCATCTACATTGCGCAACGACCTTTGCGGTCGATAT
CCCCTTAATTTATCACTTCCAATGCCTACCCGTACCCCGCTTCCACACAA
TCGTGTTTGTCCTTATTCTCTGGTCTACGCGACGCGCTCGGTCCAGCGGA
AAACCTACGGCCACGGGAGGCTCCGGCGGTACGAAGAGGGTTAGGCCGCA
GGGGGAGGAGAGGGATCGTTCGCTCAACAATGCGGCAAAACTGAGGGTTG
CCGGGGGCTTGGTAAAGGGGCGACGGCTGGAGTCTCCAGACGTATTTCTG
CGTCCCATGATGGGGAAGGTCAGATTCTGGGAGTAGCCCTCCTAAAGGGT
GTCTGGTGTACGTCTGCCCGCGTCGGCTAATCTGCTTCTAGCACGCGGAG
CCTTGCGTTCTCTCGGCGTTAGACTGGTTCATCGCGAAGATAAACAGCAC
TCGCTACGAAACATAGTTCAAACCCGATGATGACCGATGCATCCGGTGGC
AGCTATTGGCAGGCAGTAACTGCCTTGACCTACGCTTCAAGAAAACGGCA
GGGCAACACGACTGGTTCCTGTCTAAGGTATCGACTCGCAGCGATTGACT
TGTCGACTTTGGGTCAGCCTCTCCCCGTAATCTGTTCCATGACATGACTC
TATGGTTTTACCCTATCCCTACTGCTACTTGACCTGGACAGCGCCTTCGC
CATCATGTTCCAGGTGAAGGAGGCGTTATTCAGCACGCTCAGTGGCTTTG
GAGTTTTCGAAACGGGCAACACGCGGGTGAGCACTTCCGCCTCACACTCG
CGCCCGTTGATATCGTTGCCACCTTTGACCGGAGGCGCGATTGCGAGCTT
TCCCCTGCGATTTGATCTCTGGCATCGGATGCTGAGATGAAGGATGGCGG
TTTTTTTTGGGAGGGGGGGCTTTCGTGCTTTGAGCCGTTAGAAGTTTATT
CTTGCCCGCGCTTAATCCAGTACAAACTGTTGTTTGTCCTCCCTACTCAG
TTTCTCGACCTATTTTCTGGTTCGGGCTCGGTGGGCGTGGAGGCATTATC
TCGGGGAGCCGGCCATGCTACGTTCGTCGATTTTGCGAAGGACTGCTGCG
AGGTAAAAATCTTTTCTCCTAGGGTTGTTCCGGAGAGATCTTGTATTCCT
CGTCGCCCTTGCACGATCTTTGATAACGACTGCTGTCGAGACCCGACGCC
TGTAGCGGAGGTTTACCGTTTGTGCAGGCGACACGTGGCGACAAGAGTCG
GGTGGGACGGATTCCGCAACGCTTGAGTCCGTGTCATGAAGAACCAATTC
CAACGCTGCTGTCGCTGCTCACGGTGCGTGACATCGTGCAGGTATCCCTC
CGAAACGCCTTGTCGTGTGGCTTCGCCGACCAGGCCAATGCCGTCCGCGG
AGACGTCTTTGATGTGAGTTCAAGCTGTTTGACCTTGTCACCCAATCATA
ATTGCGGGGGGGCTCATCTCTTGACAATCGGCCTTCTATAGTGTAGCAGG
TCGAGTAGTGCTTAAGGCAGGCACAATGCGCCCTGCCATCCCAGTTTACC
CTCGCTCCGTAGGGCTGTGCCCAAGGAGCTGAAGATGGTATATAGTTATA
CTTACATATTTTTTGTATTACATCTATCACTGTCATCCCCCCCCTCGGAC
TTTCTCTCCTCTAATCCGACCGAAGAATCCTAAAAGTTGAAAGCATGTCC
TCTCTATGGTGGGAAACTTGATGGGAACTTCGAAGGTATTTCGGCAAGCG
ACCAACATCACCCTAGCTTACTGCGACATTCATGCTCCCAAAAAAATTAC
GACCCTCTTTTTTTTTCCGTTACCTTCAGCAGTCACCAGTAACCTAGAAG
CCGCGGTTTTTGGCCTTCGTAACGAGAAAATGTGCATATATCCCTTGGGG
CCATAGGTGGGATTGGTAACCTAGCACTTTGATTTGAGAGGTCTCATCGG
CAGGGAGAGATAAAATAAAAATCTGGGGCAGTGCAGGTATTTTATGACTC
CTTGCTGGAAAGATTTGACAGGATAATAACCTACTTTCGTCCGGAACGTT
CTCGTAATATTCTCTACCTCGAGAGGGACAGACTCTCAACACGGCCGCAA
AATACCTGGCGCGTTTTCACAAGCGCGAAATGCGACTCGGAACGATGCTC
GCGCCGAGCCATGCTACAAGGGGCCTCAAGAGGCTCGAATAAACCGCATG
AAAGTTAATACTCGCTTGTCGGGTTCGAGTACGCACAGGCGTTAGTTCAA
CATTTTTCGGTTCGTTCTCGTGATGATTATATCTCCTGTCCTCAGTTTTC
AGATTTAATTTTTTATCTGAGTCGCTTCCCAGTCTCTTTTTATGTCGGCC
GGGTGGTGTGTGCATGCGTGCGTATGCGTGTGTGTTCCGTCAGGTCTTGT
ACAACCCTCGGAAGTTCGGCCTTGATGCCCCCTACGACGTGGTGGTCGTA
ACGCCTCCGTACGAGGAAGTTGTCTACGGTGATCTCGTCAAAGCCCTGGC
GGCCAGCGATGTGAGCAGTGGGAGGCTTACGGGGAGGTGGGCGTAGTGGA
AGGTTGCATTACGGTTACTTGCAGCGTTAGCTTCCGTTGAAGCGTACTGC
TGCGGGTACCACTGTAGCGTTGGCAGGGTGGGGCGAGCTCTCCCCTGTAT
CCTATTGTGCGCTTGCGAACGCATTACCAACACTCAGCCATTTTGGCAGG
TCCGGTTTATATTCTTATGAGAAAAGGGCGTTGTGGTTCTCGTTGCCTTT
CGACAAGGGGCAAAACAAAACTAAAAGCGAGACTGAAGTGGCGCGATCGG
ATGGGTTATTCTGTTTGGGTGCGCCTATTTACCAGACATGGGTGATTTTG
TCGAACCACCACCCAAGACAAACAGTAAGACACTCATTTCTGTTTTTTTT
TTCAATCCCGGGTGGCCAACCACCACTTCCGGTATGGCCAACCCGACCAA
TATCGCTAACGCTAACCTAGACCCTCCTACCCCAGCTGACCGCGTGGTCC
CAGTTCATGGTCATGGCTGGAGAACCAAAAAGGACCAAAAAGGGGGCAAA
AGGGGAGGGGCGCTGGGTAGTAGTTTCCCTGGGTTTTTGTCGCGTGCGGT
GCTTGGGTGGTGGTTCGTCAAAAGCACCCCATGTGTGGTTAATAGGCGCG
GTCATTCTGTTTGGTCTTGGCCCTCTATGCTTTCCCTGCTCCGTCAGTGA
TGGTGCCCATCTGCTTGACACCGACAAGTCCTTCCACCGTCGGCAGAGTG
TGCGAAAGTCGTGGGTTACACTAGCGCACCAAACTTTGCGGGTTGCGTCG
TTCTCTCCACCCCTCGATTGGCGCGCGACCGTCGCTTCCCGCTTCCCCAT
CCCATTTCCCTCCGTTAACGCGACACTCTTGTCAATCACCCTAATATCTT
CTCCTGAAACAACTGTCACTATCGCCTCCCGGTAGCTCGTCGCGAGGGAC
ACGATCGTGGTATTGGAATATCCCGTGGAGCTCGGTTGCTTGCCGCAGGC
CATCGGGGAAGGCAGCATGGTGGGGCTTCGCAATCGACGCTACGGGCGAA
CGGTGATCGGAGTGTGGGTGTACTTGCCGACGGGTCAGCACGACGATCTT
CTTGACGCTAGACCAGAGGAGTTTGTAAGTATTAGAAAAAAGTAACGTGG
TGTGCTTTGTTGGTAACGGCGCTTTCTTTCGCCTTCGCGCCGCCAGAGTG
TTCGCATGTGGAAGGAAGTCCGGGTTCGCGGCAATCGTGATTGGGGGAGT
TCTGGGAAAGAGATGCGGTAAAGGAGAACGGAGTTGACAAGGAACTAACG
CGTCAGAGTAGAGAAAGCGATTTTGTTTGAGGAAGTTCGCCGGGAAGAAG
ATTTAACTGCGAAACCGCCAACCAGTTTTCTTTTCCGTGTAAAGTTTGTC
TGCCGCGATTTCCCTTCTGTCAGTGAATCTGTTTACATGCGTGGTTTTTT
ACATGTGTTTTTACTGTCCAGCTAATTCACCACGATTCGGATTGGTAACC
GCGTGATTAGTGTATGGGTATGTTTGGGGCCCAATATATCAATGTGAAGA
ACATACAACACACACATCCGTCTTTCGGGAATCCCTATATTATGCACACA
TGATCTGCACGCAAAATTTTGCACACACAAATTCCGGAAGGTGAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1430:165799..170993+

>mRNA_F-serratus_M_contig1430.3095.1 ID=mRNA_F-serratus_M_contig1430.3095.1|Name=mRNA_F-serratus_M_contig1430.3095.1|organism=Fucus serratus male|type=CDS|length=2310bp|location=Sequence derived from alignment at F-serratus_M_contig1430:165799..170993+ (Fucus serratus male)
ATGGGAGTCATTCGTTCCCCTGGAAATCGAAAAGAACTCAGCAAAGGAAT
AAGTTCTTGCTGTTGGGTACTAATGGTGGCGAACCTGCTAGTGAATTGCC
GATCCTTTCAATTTCAACCCCTTATATCCCATCAAACGAGCGGCTCCCCT
CTTCAGGGTGGTTCAGGCCAGGGAAAGGATACAAGTAATCGAGGGCCACC
ATCCCGAGGCATCTATCCTGCTGGCCTTTCGATCGGAGCGGAGTCAAACT
CCTTGTCAGTTTTGAGGCAAAGGATGGTGGTTAGCTCCACAGTAGAGACC
GACGATGGTGATTTTGAGAACGATCGACGATATCGGCGCAAGCCTCGCCG
GAGTGGGTTGCGCAGAGACGACGCAGGGCTTCCAACGGAGAAGGTCTACG
CTCCGCGAATAAGCGCCTAATGGGAGTCATTCGTTCCCCTGGAAATCGAA
AAGAACTCAGCAAAGGAATAAGTTCTTGCTGTTGGGTACTAATGGTGGCG
AACCTGCTAGTGAATTGCCGATCCTTTCAATTTCAACCCCTTATATCCCA
TCAAACGAGCGGCTCCCCTCTTCAGGGTGGTTCAGGCCAGGGAAAGGATA
CAAGTAATCGAGGGCCACCATCCCGAGGCATCTATCCTGCTGGCCTTTCG
ATCGGAGCGGAGTCAAACTCCTTGTCAGTTTTGAGGCAAAGGATGGTGGT
TAGCTCCACAGTAGAGACCGACGATGGTGATTTTGAGAACGATCGACGAT
ATCGGCGCAAGCCTCGCCGGAGTGGGTTGCGCAGAGACGACGCAGGGCTT
CCAACGGAGAAGGTCTACGCTCCGCGAATAAGCGCCTACGGAAAACCTAC
GGCCACGGGAGGCTCCGGCGGTACGAAGAGGGTTAGGCCGCAGGGGGAGG
AGAGGGATCGTTCGCTCAACAATGCGGCAAAACTGAGGGTTGCCGGGGGC
TTGGTAAAGGGGCGACGGCTGGAGTCTCCAGACGTATTTCTGCGTCCCAT
GATGGGGAAGCGGAAAACCTACGGCCACGGGAGGCTCCGGCGGTACGAAG
AGGGTTAGGCCGCAGGGGGAGGAGAGGGATCGTTCGCTCAACAATGCGGC
AAAACTGAGGGTTGCCGGGGGCTTGGTAAAGGGGCGACGGCTGGAGTCTC
CAGACGTATTTCTGCGTCCCATGATGGGGAAGGTGAAGGAGGCGTTATTC
AGCACGCTCAGTGGCTTTGGAGTTTTCGAAACGGGCAACACGCGGGTGAA
GGAGGCGTTATTCAGCACGCTCAGTGGCTTTGGAGTTTTCGAAACGGGCA
ACACGCGGTTTCTCGACCTATTTTCTGGTTCGGGCTCGGTGGGCGTGGAG
GCATTATCTCGGGGAGCCGGCCATGCTACGTTCGTCGATTTTGCGAAGGA
CTGCTGCGAGTTTCTCGACCTATTTTCTGGTTCGGGCTCGGTGGGCGTGG
AGGCATTATCTCGGGGAGCCGGCCATGCTACGTTCGTCGATTTTGCGAAG
GACTGCTGCGAGGTATCCCTCCGAAACGCCTTGTCGTGTGGCTTCGCCGA
CCAGGCCAATGCCGTCCGCGGAGACGTCTTTGATGTATCCCTCCGAAACG
CCTTGTCGTGTGGCTTCGCCGACCAGGCCAATGCCGTCCGCGGAGACGTC
TTTGATGTCTTGTACAACCCTCGGAAGTTCGGCCTTGATGCCCCCTACGA
CGTGGTGGTCGTAACGCCTCCGTACGAGGAAGTTGTCTACGGTGATCTCG
TCAAAGCCCTGGCGGCCAGCGATGTCTTGTACAACCCTCGGAAGTTCGGC
CTTGATGCCCCCTACGACGTGGTGGTCGTAACGCCTCCGTACGAGGAAGT
TGTCTACGGTGATCTCGTCAAAGCCCTGGCGGCCAGCGATCTCGTCGCGA
GGGACACGATCGTGGTATTGGAATATCCCGTGGAGCTCGGTTGCTTGCCG
CAGGCCATCGGGGAAGGCAGCATGGTGGGGCTTCGCAATCGACGCTACGG
GCGAACGGTGATCGGAGTGTGGGTGTACTTGCCGACGGGTCAGCACGACG
ATCTTCTTGACGCTAGACCAGAGGAGTTTGTAAGTATTAGAAAAAAGTAA
CTCGTCGCGAGGGACACGATCGTGGTATTGGAATATCCCGTGGAGCTCGG
TTGCTTGCCGCAGGCCATCGGGGAAGGCAGCATGGTGGGGCTTCGCAATC
GACGCTACGGGCGAACGGTGATCGGAGTGTGGGTGTACTTGCCGACGGGT
CAGCACGACGATCTTCTTGACGCTAGACCAGAGGAGTTTGTAAGTATTAG
AAAAAAGTAA
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