mRNA_F-serratus_M_contig1430.3092.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: D8LPW5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW5_ECTSI) HSP 1 Score: 235 bits (599), Expect = 2.750e-73 Identity = 138/245 (56.33%), Postives = 167/245 (68.16%), Query Frame = 3
Query: 114 MKVHYPFASLSPVVVLLLAATEEVRGFIQH------AAIPRCGATSVATEQ----------GLGRTSSATSCVSMMA-----SRGDGISRGVWVDRALGVAFTGAAALIQVPGKSFADPLVGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
MK+ A+ S +V LL AT V F+ H AA +CGA S +Q G+G S S + M S G G+SRG W R LG A TGA A+ Q P + A+ VGEGGLP+GARQFSNLVKVQKDWAALGK+I+ +GADVT +EWKNVALFLR+VYQ GG+LE++AG F PDKKK+ALALVR IQKEV+AAD P+REK+ AF+ AQ SV+KKF DFM+LFNDVP+EL
Sbjct: 1 MKLGNSSAAASSLVFLLRLATSGVHSFVLHPHAIASAAPAKCGAISFVRKQHAPAARAAAAGVGPDPSCRSRATRMTTGALPSDGGGMSRGQWAGRMLGAAITGAVAVSQGPEFASAEVGVGEGGLPDGARQFSNLVKVQKDWAALGKSIERQGADVTADEWKNVALFLRKVYQLGGELEYLAGTFPPDKKKSALALVRSIQKEVQAADVPAREKDAAAFMKAQASVQKKFEDFMELFNDVPSEL 245
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A836C9Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q5_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.520e-33 Identity = 64/125 (51.20%), Postives = 90/125 (72.00%), Query Frame = 3
Query: 411 VGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
VGEG LP+ A F L+++QKDWAA+GKT++ R DV +EW+NV L+LR++YQ G +L+ +A GF+ K+ ALALV ++ E AAD P+ ++ +AFLAAQ S+E K +F+DLF DVP EL
Sbjct: 12 VGEGNLPDEAYAFLKLIQLQKDWAAIGKTVRER-EDVAGDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL 135
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A7S2SX15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SX15_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.220e-31 Identity = 61/145 (42.07%), Postives = 94/145 (64.83%), Query Frame = 3
Query: 351 AFTGAAALIQVPGKSFADPLVGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
A+ A + P + A VGEGGLP GARQF N+++++ +W +GKT++ +++ +W+N+ FLRR YQ G D++F+A G S DK+ AA V IQK +E AD P+++ + AFL AQ V ++ +DF++L +DVP EL
Sbjct: 32 AWASAGLALAGPARVSAAAPVGEGGLPEGARQFDNVLRMRVEWDVMGKTVQD-SEELSAAQWRNIQGFLRRAYQVGNDMKFVAKGVSKDKQAAAFKAVEAIQKSIEGADKPAQQNDRAAFLVAQKDVARQIADFLELISDVPDEL 175
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A7S1XVU1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVU1_9STRA) HSP 1 Score: 120 bits (300), Expect = 5.970e-30 Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 3
Query: 411 VGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
VGEG LP GARQF N++K QK WA LGK +K RG+ +EW NV LR VYQ G D++ +A G +K+ ALV+++Q +++ AD P+++K+ AFL A + K F+ F DL +DVP EL
Sbjct: 14 VGEGDLPEGARQFQNVLKAQKTWAELGKAVKDRGSQFDDKEWVNVQTLLRSVYQVGDDMKAVAKGNGNEKQ--LFALVKEMQGKIQGADEPAKQKDAAAFLVAVTDIGKSFTSFFDLLSDVPDEL 136
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A7S2H2F6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2F6_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.270e-26 Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = 3
Query: 351 AFTGAAALIQVPGKSFADPLVGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFND--VPAEL 785
AFT A + + P VGEGGLP+GARQF NLV+ Q+DW LGK +++R + T EEWKNV +LR++Y G D+ F++ KK A ALV+ +++V+ A P K+ EAF+A + + S F+ L + VP EL
Sbjct: 77 AFTVATSAMAKP--------VGEGGLPDGARQFDNLVRAQRDWIKLGKAVESRHEEFTDEEWKNVGFYLRKLYSVGDDMTFLSQNMEAAKKTDAAALVKSFKQKVKDAAKPVETKDWEAFVAVEKETSSQLSTFLGLLSSGSVPDEL 215
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A7S2PP61_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PP61_9STRA) HSP 1 Score: 106 bits (265), Expect = 4.180e-24 Identity = 69/178 (38.76%), Postives = 99/178 (55.62%), Query Frame = 3
Query: 255 GRTSSATSCVSMMASRGDGISRGVWVDRALGVAFTGAAALIQVPGKSFADPLVGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGG-FSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
G +S T C ASR D +S V G+A + A L +PG + +GEGGLP+GA QFS ++KV+ ++ K + + D+T EEW + FLR VY AG D++ I+ G F P KK+ A ++ +QK V+AA P +K+V+ F A + F DF+D DVP EL
Sbjct: 28 GERASKTRCE---ASRRDFLSTAV---ATAGIAASSATLLTPLPGAAKG---LGEGGLPDGAAQFSRVIKVKAQLKSVAKRVAEQPDDITKEEWDKIDDFLRTVYSAGNDMKVISKGIFDPSKKEKADEDIKLLQKVVQAAQKPVAQKDVKGFSAIASKADGLFDDFLDQLRDVPDEL 196
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A7S3ZYL3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYL3_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 5.890e-21 Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 3
Query: 426 LPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
LP+GARQF+ ++ +W G+ +K D+ +EW+ V L LRRVY AG D+ ++A G + DK+ AA L +D QK V+ AD P++ K+ + A + SDF+DL +DVPAEL
Sbjct: 76 LPDGARQFNEFQGLKGEWTRFGERLKK--TDIDDKEWEGVPLLLRRVYDAGDDMLYMAKGLAKDKQDAAKKLAKDFQKGVKDADRPAQAKDRATVIKAYEATAPLLSDFLDLTSDVPAEL 193
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: W7UBW2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBW2_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.260e-20 Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 3
Query: 360 GAAALIQVPGKSFADPLVGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
G A I P ++ A VGEGGLP F +++ Q++W +GKTI R + EEW N +FLR Y G D+ I K++ A+ +D Q+ D P++ K+ + F+ AQ F DF+DL +DVP EL
Sbjct: 69 GGATWISAPSQAMA--AVGEGGLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A6V2A969_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A969_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.560e-17 Identity = 56/145 (38.62%), Postives = 82/145 (56.55%), Query Frame = 3
Query: 357 TGAAALIQVPGKSFADPLVGEGG-LPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGG-FSPDKKKAALALVRDIQKEVEAADGPSREKNVEAFLAAQGSVEKKFSDFMDLFNDVPAEL 785
TGA A+ +P K A V +G LP GA QFS ++KV+ D A + K + +EW N++ FLR +Y++G DL+ I G + P+KKK A +++ IQK +A DGP +++ EA L K DF +L DVP E+
Sbjct: 79 TGAIAVF-LPNKQPALADVSDGNVLPQGAAQFSRVLKVKTDLAVIEKKCIESPDKLDKKEWDNISDFLRNLYRSGEDLKSIQKGMYDPEKKKEADQIIKLIQKVAQAGDGPVSKQDPEALLILTKKATKLLDDFFELLRDVPDEI 222
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Match: A0A7S2H2F4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2F4_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.960e-17 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 3
Query: 351 AFTGAAALIQVPGKSFADPLVGEGGLPNGARQFSNLVKVQKDWAALGKTIKARGADVTPEEWKNVALFLRRVYQAGGDLEFIAGGFSPDKK 623
AFT A + + P VGEGGLP+GARQF NLV+ Q+DW LGK +++R + T EEWKNV +LR++Y G D+ F++ KK
Sbjct: 77 AFTVATSAMAKP--------VGEGGLPDGARQFDNLVRAQRDWIKLGKAVESRHEEFTDEEWKNVGFYLRKLYSVGDDMTFLSQNMEAAKK 159 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1430.3092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1430.3092.1 >prot_F-serratus_M_contig1430.3092.1 ID=prot_F-serratus_M_contig1430.3092.1|Name=mRNA_F-serratus_M_contig1430.3092.1|organism=Fucus serratus male|type=polypeptide|length=249bp MLLALMDHVSYCFHWRRCVTSSSIMKVHYPFASLSPVVVLLLAATEEVRGback to top mRNA from alignment at F-serratus_M_contig1430:141727..146954- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1430.3092.1 ID=mRNA_F-serratus_M_contig1430.3092.1|Name=mRNA_F-serratus_M_contig1430.3092.1|organism=Fucus serratus male|type=mRNA|length=5228bp|location=Sequence derived from alignment at F-serratus_M_contig1430:141727..146954- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1430:141727..146954- >mRNA_F-serratus_M_contig1430.3092.1 ID=mRNA_F-serratus_M_contig1430.3092.1|Name=mRNA_F-serratus_M_contig1430.3092.1|organism=Fucus serratus male|type=CDS|length=1494bp|location=Sequence derived from alignment at F-serratus_M_contig1430:141727..146954- (Fucus serratus male)back to top |