mRNA_F-serratus_M_contig1430.3089.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1430.3089.1
Unique NamemRNA_F-serratus_M_contig1430.3089.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: D7G939_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 8.700e-109
Identity = 163/248 (65.73%), Postives = 202/248 (81.45%), Query Frame = 2
Query:   14 SISCEEVSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGH---RADADETA--RDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTGRVFLLPRQHLQEPPFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDARDFDRIVDACM 742
            ++ C E STA PPQDA+LVNI+PVG VSLLLTPGY +S+NQRAT+Y+LAVA+D+AEALR +PGFRLGFNS GSSASVNHLHFQCWYFDA   GGL IE+S+T ++ ++ LP       A+ +  A   D ++V+ LQGYP+R LVFHTLGKDLEA G+ IEKCV+FL+  NTPHT++FSTGRVF+LPRQHL+EPPFAVVPGFPEVSG++IVT E D+  +TAD IY +W +K+AVD+  FDRI D C+
Sbjct:  307 AVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYAHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQCWYFDAGP-GGLAIESSKTRHLATVPLPRSSFSPPAEGENAADKEDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 553          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A6H5JG89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 7.020e-105
Identity = 163/252 (64.68%), Postives = 202/252 (80.16%), Query Frame = 2
Query:   14 SISCEEVSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQ---CWYFDASETGGLPIETSETLYVGSLAL------PSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTGRVFLLPRQHLQEPPFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDARDFDRIVDACM 742
            ++ C E STA PPQDA+LVNI+PVG VSLLLTPGYP+S+NQRAT+Y+LAVA+D+AEALR +PGFRLGFNS GSSASVNHLHFQ   CWYFDA   G L IE+S+T ++ ++ L      PS    +A +   D ++V+ LQGYP+R LVFHTLGKDLEA G+ IEKCV+FL+  NTPHT++FSTGRVF+LPRQHL+EPPFAVVPGFPEVSG++IVT E D+  +TAD IY +W +K+AVD+  FDRI D C+
Sbjct:  393 AVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQAAGCWYFDAGPRG-LAIESSKTRHLATVPLSRASFSPSAKGENAADK-EDSLEVHVLQGYPIRALVFHTLGKDLEAAGEAIEKCVSFLVEENTPHTVVFSTGRVFVLPRQHLEEPPFAVVPGFPEVSGEVIVTREDDFHTITADQIYEWWRDKVAVDSEHFDRITDGCL 642          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: X6NVT4_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NVT4_RETFI)

HSP 1 Score: 91.7 bits (226), Expect = 1.190e-16
Identity = 78/254 (30.71%), Postives = 115/254 (45.28%), Query Frame = 2
Query:    8 VSSISCEEVSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPG---FRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQG--YPLRGLVFH--TLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTGRVFLLPRQHLQ-EPPFAVVPGFPEVSGQIIVTSEGDYAKL-TADDIYNFWHEKIAVDARDFDRIVDACM 742
            V SI C+    A      LLVN  P+G  S L TP +     Q  T   L V + +     S+     FR+GFNS G+ ASVNH HFQ W  D   TG LP+ET              H+       +  + ++T     YP+R L++   T  + LE     +  CV FL+  + PH ++ S   V+L  R   Q    + +  GF +VSG I V +E  +  L T + +Y    ++I+V    +D +   C+
Sbjct:  323 VDSIQCDPFVFAKTDTHLLLVNRFPIGNYSGLFTPYFWQKLPQVLTKELLHVGLQFNAMFLSQSHKGTFRVGFNSLGAMASVNHFHFQFWKID---TGLLPVETL-------------HKTPIPTANKQHLQIFTFNDNVYPIRTLIYPIVTGNRTLET----LWHCVKFLIESDIPHNLMISRQFVYLFVRNEQQLTSNYPIFYGFSDVSGWITVLNEQMFDHLLTFEMLYQDMQQRISVQPSKWDFVYSNCV 556          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A1B6Q7Q1_SORBI (Uncharacterized protein n=9 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6Q7Q1_SORBI)

HSP 1 Score: 88.2 bits (217), Expect = 8.710e-16
Identity = 66/220 (30.00%), Postives = 102/220 (46.36%), Query Frame = 2
Query:   59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEP----------PFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNF 682
            A+L+N+ P+G    LLTP       QR    +  +AM  A   R+ P FR+G+NS G  A++NHLHFQ +Y         P+E + T  + SL               + + ++ L  YP+ G +F   G  LE + DV+ K   FL   N P  +L S    RVFLLP+ + ++              + P   E+SG +++    DY + +  +I  F
Sbjct:  164 AILINVSPIGYCHALLTPKIQDCLPQRIDQESFLIAMYVAREARN-PFFRVGYNSLGGFATINHLHFQAYYLRVQ----YPVEKATTEKLTSLG--------------NGVSIFHLLDYPVSGFLFKG-GASLEDLSDVVSKVCIFLQENNRPFNVLISESGKRVFLLPQCYAEKQILGKASQEFLDMRINPAIWELSGHLVLKRRKDYDEASEANICRF 363          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A2T7DD07_9POAL (Uncharacterized protein n=8 Tax=Paniceae TaxID=147428 RepID=A0A2T7DD07_9POAL)

HSP 1 Score: 86.7 bits (213), Expect = 3.230e-15
Identity = 71/248 (28.63%), Postives = 110/248 (44.35%), Query Frame = 2
Query:   59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFA----------VVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDAR---------DFDRIVDAC 739
            A+L+N+ P+G   +LLTP       QR    +  +AM  A   R+ P FR+G+NS G  A++NHLHFQ +Y         P+E + T  + +L               + + +  L  YP+ G VF   G  LE + DV+ K   FL   N P  +L S     VFLLP+ + ++              + P   E+SG +++  + DY + +  +I  F  E    +           DF  + DAC
Sbjct:  169 AILINVSPIGYCHVLLTPKIQDCLPQRIDEESFLIAMYIAREARN-PFFRVGYNSLGGFATINHLHFQAYYLKVP----YPVEKATTEKLTTLV--------------NGVSISQLVDYPVSGFVFEG-GASLEDLSDVVAKVCIFLQENNRPFNVLISESGNSVFLLPQCYAEKQRLGKASQEFLDMRINPAIWELSGHLVLKRKKDYDEASEPNICRFLVEAALSETEFQELKRCVLDFLTVSDAC 396          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A7I8KHT5_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KHT5_SPIIN)

HSP 1 Score: 86.3 bits (212), Expect = 5.360e-15
Identity = 67/224 (29.91%), Postives = 105/224 (46.88%), Query Frame = 2
Query:   32 VSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFAVV----------PGFPEVSGQIIVTSEGDYAKLTAD 667
            V T  PP + + +N+ P+    +LL P       Q+  S +  +A+  A A    P FRLG+NS G+ A++NHLHFQ +Y         P+E + T  +         R     T +  + V +L  YP+RGLVF   G DL+A+ D++     FL   NTP  +L S    R+F+ P+ + ++     V          P   E+SG +++    DY   + D
Sbjct:  166 VGTTSPP-NVVAINVSPIEYGHVLLIPRVLECLPQKIDSESFFLAVKMA-AEAGSPYFRLGYNSLGAFATINHLHFQAYYLSVP----FPVEKAPTKKIA--------RTKGGPT-KGGVQVSSLMSYPVRGLVFEG-GSDLQALSDLVSNVCVFLQENNTPFNVLISDSGKRIFVFPQCYAEKQALGEVSQELLETQVNPAAWEISGHMVLKRRKDYDDASED 373          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A843VDM2_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VDM2_COLES)

HSP 1 Score: 85.9 bits (211), Expect = 6.890e-15
Identity = 66/225 (29.33%), Postives = 107/225 (47.56%), Query Frame = 2
Query:   32 VSTALPPQDALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFAVV----------PGFPEVSGQIIVTSEGDYAKLTADD 670
            V T+  P   + +N+ P+    ++L P       QR    +L +A+  A+   S P FRLG+NS G+ A++NHLHFQ +Y       G+P+   +      +AL +G            ++V+ L  YP+RGLVF  L   LE +  V+     FL   N P+ +L S    RVFL P+ + ++     V          P   E+SG +++  + DY + + +D
Sbjct:  152 VETSQRPHGMVAINVSPIEYGHVVLIPRTLDCLPQRIDCESLLLALHMADEAAS-PYFRLGYNSLGAFATINHLHFQAYYL------GMPLAVEKAQTRRIMALSNG------------VNVFQLLEYPVRGLVFEGLST-LEDLSIVVSDACIFLQENNIPYNILISDSGKRVFLFPQCYAEKQALGEVSQELLDTQVNPAVWEISGHMVLKRKKDYEEASEED 356          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A3S4PXI4_9MAGN (GDP-L-galactose phosphorylase 2-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4PXI4_9MAGN)

HSP 1 Score: 85.9 bits (211), Expect = 7.060e-15
Identity = 61/220 (27.73%), Postives = 101/220 (45.91%), Query Frame = 2
Query:   68 VNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEPPFAVV----------PGFPEVSGQIIVTSEGDYAKLTADDIYNFWHE 691
            +N+ P+    +LL P       QR    +  +A+ Y  A    P FRLG+NS G+ A++NHLHFQ +Y         P+E + T  + S+             + + + +Y L  YP+RGLVF   G  LE + DV+      L   N P+ +L S    R+F+ P+ + ++     V          P   E+SG +++  + DY + + D+ +    E
Sbjct:  171 INVSPIEYAHVLLIPRILECLPQRIDRESFLLAL-YMAAEAGNPYFRLGYNSLGAFATINHLHFQAYYLAVP----FPVEKAPTRKISSVK----------GLSENEVKIYELSNYPVRGLVFEG-GNTLEDLADVVSNACICLQNNNIPYNVLISDSGKRIFIFPQCYAEKQALGEVKQELLDTQVNPAVWEISGHMVLKRKKDYEEASDDNAWRLLAE 374          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A5J9VIH9_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9VIH9_9POAL)

HSP 1 Score: 85.5 bits (210), Expect = 7.650e-15
Identity = 66/220 (30.00%), Postives = 102/220 (46.36%), Query Frame = 2
Query:   59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFST--GRVFLLPRQHLQEP----------PFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNF 682
            A+L+N+ P+G   +LL P       QR    +  +AM  A    ++P FR+G+NS G  A++NHLHFQ +Y         P+E + T  + +L+              + + V  L  YP+ G  F   G  LEA+ DV+ K   FL   N P  +L S    RVFLLP+ + ++              + P   E+SG +I+    DY + +   I+ F
Sbjct:  162 AILINVSPIGYCHVLLIPRIQDCLPQRIDQESFLLAMHVAREA-TDPFFRVGYNSLGGFATINHLHFQAYYLKVQ----YPVEKASTEKLTTLS--------------NGVSVALLVQYPVCGFAFEG-GTCLEALSDVVSKICIFLQESNRPFNVLISECGKRVFLLPQCYAEKQLAGKASQEFLDMRINPAIWELSGHLILKRRKDYDEASEATIFRF 361          
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Match: A0A368REI1_SETIT (Uncharacterized protein n=4 Tax=Setaria TaxID=4554 RepID=A0A368REI1_SETIT)

HSP 1 Score: 85.5 bits (210), Expect = 8.000e-15
Identity = 72/248 (29.03%), Postives = 113/248 (45.56%), Query Frame = 2
Query:   59 ALLVNIKPVGLVSLLLTPGYPYSNNQRATSYALAVAMDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSETLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAVGDVIEKCVNFLLGVNTPHTMLFSTG--RVFLLPRQHLQEP----------PFAVVPGFPEVSGQIIVTSEGDYAKLTADDIYNFWHEKIAVDARDFDRIVDACMT*TNESAA 766
            A+L+N+ P+G   +LLTP       QR    +  +AM  A   R+ P FR+G+NS G  A++NHLHFQ +Y         P+E + T  + +L               + + +  L GYP+ G VF   G  LE +  ++ K   FL   N P  +L S    RVFLLP+ + ++              + P   E+SG +++  + DY + +   I  F  E  AV   +F ++    +     SAA
Sbjct:  169 AILINVSPIGYCHVLLTPQIQDCLPQRIDHESFLMAMYVAREARN-PFFRVGYNSLGGFATINHLHFQAYYLKVQ----YPVEKATTEKLTTLV--------------NGVSIAQLVGYPVSGFVFEG-GASLEDLSCMVSKVCIFLQENNRPFNVLISESGRRVFLLPQCYAEKQLLGKASQEFLEMRINPAIWELSGHLVLKRKKDYDEASELYICRFLVEA-AVSETEFQQLKQCVLDFLTASAA 395          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1430.3089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G939_ECTSI8.700e-10965.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG89_9PHAE7.020e-10564.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
X6NVT4_RETFI1.190e-1630.71Uncharacterized protein n=1 Tax=Reticulomyxa filos... [more]
A0A1B6Q7Q1_SORBI8.710e-1630.00Uncharacterized protein n=9 Tax=Andropogoneae TaxI... [more]
A0A2T7DD07_9POAL3.230e-1528.63Uncharacterized protein n=8 Tax=Paniceae TaxID=147... [more]
A0A7I8KHT5_SPIIN5.360e-1529.91Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]
A0A843VDM2_COLES6.890e-1529.33Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
A0A3S4PXI4_9MAGN7.060e-1527.73GDP-L-galactose phosphorylase 2-like protein n=1 T... [more]
A0A5J9VIH9_9POAL7.650e-1530.00Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
A0A368REI1_SETIT8.000e-1529.03Uncharacterized protein n=4 Tax=Setaria TaxID=4554... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1430contigF-serratus_M_contig1430:98505..101176 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score270.8
Seed ortholog evalue5e-70
Seed eggNOG ortholog2880.D7G939
Preferred nameGDPGP1
KEGG rclassRC00002
KEGG koko:K14190,ko:K15630
KEGG ReactionR07678
KEGG Pathwayko00053,ko01100,ko01110,map00053,map01100,map01110
KEGG ModuleM00114
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006950,GO:0006952,GO:0006979,GO:0008150,GO:0008152,GO:0008194,GO:0008905,GO:0008928,GO:0009058,GO:0009108,GO:0009110,GO:0009266,GO:0009408,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009719,GO:0009725,GO:0009753,GO:0009987,GO:0010033,GO:0010035,GO:0010193,GO:0010471,GO:0010472,GO:0010473,GO:0010474,GO:0010475,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016757,GO:0016758,GO:0016772,GO:0016779,GO:0019318,GO:0019752,GO:0019852,GO:0019853,GO:0033036,GO:0033037,GO:0033554,GO:0035251,GO:0042221,GO:0042364,GO:0042493,GO:0042545,GO:0042742,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045229,GO:0046364,GO:0046394,GO:0046527,GO:0046677,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0052386,GO:0052482,GO:0052542,GO:0052543,GO:0052544,GO:0052545,GO:0070568,GO:0070727,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0080046,GO:0080048,GO:0098542,GO:1901576,GO:1901700
EggNOG free text desc.GDP-D-glucose phosphorylase activity
EggNOG OGsKOG2720@1,KOG2720@2759
EC2.7.7.69,2.7.7.78
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size1053
Cds size582
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929416.7285256-UTR-F-serratus_M_contig1430:98504..986181622929416.7285256-UTR-F-serratus_M_contig1430:98504..98618Fucus serratus maleUTRF-serratus_M_contig1430 98505..98618 +
1690962841.978148-UTR-F-serratus_M_contig1430:98504..986181690962841.978148-UTR-F-serratus_M_contig1430:98504..98618Fucus serratus maleUTRF-serratus_M_contig1430 98505..98618 +
1622929416.7447557-UTR-F-serratus_M_contig1430:98917..989691622929416.7447557-UTR-F-serratus_M_contig1430:98917..98969Fucus serratus maleUTRF-serratus_M_contig1430 98918..98969 +
1690962841.9910576-UTR-F-serratus_M_contig1430:98917..989691690962841.9910576-UTR-F-serratus_M_contig1430:98917..98969Fucus serratus maleUTRF-serratus_M_contig1430 98918..98969 +
1622929416.825332-UTR-F-serratus_M_contig1430:100871..1011761622929416.825332-UTR-F-serratus_M_contig1430:100871..101176Fucus serratus maleUTRF-serratus_M_contig1430 100872..101176 +
1690962842.0601022-UTR-F-serratus_M_contig1430:100871..1011761690962842.0601022-UTR-F-serratus_M_contig1430:100871..101176Fucus serratus maleUTRF-serratus_M_contig1430 100872..101176 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929416.760027-CDS-F-serratus_M_contig1430:98969..990651622929416.760027-CDS-F-serratus_M_contig1430:98969..99065Fucus serratus maleCDSF-serratus_M_contig1430 98970..99065 +
1690962842.0064075-CDS-F-serratus_M_contig1430:98969..990651690962842.0064075-CDS-F-serratus_M_contig1430:98969..99065Fucus serratus maleCDSF-serratus_M_contig1430 98970..99065 +
1622929416.7757492-CDS-F-serratus_M_contig1430:99534..997021622929416.7757492-CDS-F-serratus_M_contig1430:99534..99702Fucus serratus maleCDSF-serratus_M_contig1430 99535..99702 +
1690962842.0255823-CDS-F-serratus_M_contig1430:99534..997021690962842.0255823-CDS-F-serratus_M_contig1430:99534..99702Fucus serratus maleCDSF-serratus_M_contig1430 99535..99702 +
1622929416.7912724-CDS-F-serratus_M_contig1430:100137..1003291622929416.7912724-CDS-F-serratus_M_contig1430:100137..100329Fucus serratus maleCDSF-serratus_M_contig1430 100138..100329 +
1690962842.03816-CDS-F-serratus_M_contig1430:100137..1003291690962842.03816-CDS-F-serratus_M_contig1430:100137..100329Fucus serratus maleCDSF-serratus_M_contig1430 100138..100329 +
1622929416.8099246-CDS-F-serratus_M_contig1430:100745..1008711622929416.8099246-CDS-F-serratus_M_contig1430:100745..100871Fucus serratus maleCDSF-serratus_M_contig1430 100746..100871 +
1690962842.0478103-CDS-F-serratus_M_contig1430:100745..1008711690962842.0478103-CDS-F-serratus_M_contig1430:100745..100871Fucus serratus maleCDSF-serratus_M_contig1430 100746..100871 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1430.3089.1prot_F-serratus_M_contig1430.3089.1Fucus serratus malepolypeptideF-serratus_M_contig1430 98970..100871 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1430.3089.1

>prot_F-serratus_M_contig1430.3089.1 ID=prot_F-serratus_M_contig1430.3089.1|Name=mRNA_F-serratus_M_contig1430.3089.1|organism=Fucus serratus male|type=polypeptide|length=194bp
MDYAEALRSEPGFRLGFNSGGSSASVNHLHFQCWYFDASETGGLPIETSE
TLYVGSLALPSGHRADADETARDMMDVYTLQGYPLRGLVFHTLGKDLEAV
GDVIEKCVNFLLGVNTPHTMLFSTGRVFLLPRQHLQEPPFAVVPGFPEVS
GQIIVTSEGDYAKLTADDIYNFWHEKIAVDARDFDRIVDACMT*
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mRNA from alignment at F-serratus_M_contig1430:98505..101176+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1430.3089.1 ID=mRNA_F-serratus_M_contig1430.3089.1|Name=mRNA_F-serratus_M_contig1430.3089.1|organism=Fucus serratus male|type=mRNA|length=2672bp|location=Sequence derived from alignment at F-serratus_M_contig1430:98505..101176+ (Fucus serratus male)
GGAGTCGGTGTCCTCTATCTCCTGCGAGGAAGTTTCGACGGCGTTGCCCC CGCAGGATGCGCTGCTGGTGAACATCAAGCCCGTGGGTCTCGTGAGCCTG TTGCTTACGCCCGGGTAAGAGATCCTCGAACGACTTGCCTGGTGTGTGTG TGTTGGCGTGTGTTTGTGTATGAGTGCGAACGTCTTGATGCTCTCGAGTC GCATCGGGCATGGACATCGTTCCTCGACCATACATAATGGCGGAGGTATC TATTGGGAGGCAAGGGCGAACGTTGAGAACCCGCTGTTTTGTCGCGTCTG GATTTGTGCTGCTACAATTCCAACCACAAGACGGATGCACAGAGTGCACG AACCGCGCCTCCGGAGATCTCGATCGAACAGCAGCAGTGCGGCACTTTCG TGTTGCCCAACAGATATCCATACTCGAACAACCAGCGCGCGACCTCCTAC GCGTTAGCTGTGGCGATGGACTACGCCGAGGCGTTAAGGAGCGAGCCCGG GTTCCGGTTAGGATTTAACAGCGGCGGTTCGTCGGCTTCGGTCAACCATC TCCACTTCCAGGTACAACAAGTACGGCGTTGTCTTGCATTTTCGCCCCCC CCCCTCCATCTTGAAGACGTTGCCTCTCCTGGTCTTTGGGAGGCGACAGA CCGCCTCTCGAGACGACGGTTATTGAAGAAAACTTGCTTGTTACTTTTCT GCCGATTTGTTACTCAATGCCCTGGCGTCTCGGTTGCTTGTAGACAAAGC TTTTCAAAACCTACGACGAAGCCTGCGTCTCTCTCGTGTAGGGCCTTTCC GTCGAACACTTGCTTGTGGCATAAGGAGGAAAGTCGTAGCGCGCGCCGCC TGACGTGACAGCTGGCGCGCGGGTAGGTTCCACGCCATGCCCCCCTTGTG GAGGTAAAACGTTTACATTACTTACTCCCTTTAAATTGCGCATCGAGCCA TGCAACCCGAGCTCCGTCGTATCGTTCCGAACCTCTCGTTGCAAACCTTT TGCGCGCTTTCTCGCCCGCCACGACATAAGTGCTGGTACTTCGATGCGTC GGAGACCGGAGGCCTCCCCATCGAGACCTCGGAGACGCTGTACGTGGGAT CTTTAGCGCTTCCCAGTGGGCACCGGGCGGATGCCGACGAGACGGCAAGA GATATGATGGACGTGTACACCTTGCAAGGCTACCCCCTCAGGGGTTTGGT GAGTAAGCTTCAGGGTGGGATCCTTCCTCTCGAGGAGCGGGAGGGGGGGG GGGGGCGGAGCGGGGTTACTCCCCGGCTCAAAAAGAAAGAAAGAAAAATC TGAACGCTTTTTTCAAATTCTAAACAGTTGTAGGTTATTTTTAGTTCCAG TACATTAACTCGGGTGCAAAAAATTTGTAGTGAATATTTGAAGTAGATAA AAAAAAACAGGTACGAGTACGTACAGATGAGGGCCAATAGCCGATTTTGG CCGCCAATCAAAGGCGGGTGAAAAGTAACATAGTTGGTCGCTCTTCCCCT TCAGAGAGGTAACGCTGCACGCACTCAACAGCTCTCACGGCGGCAGCGAC AATGCTGCGACCCCACGCGATTCTCGTAAACAACCAGCTGGGTGCCAAAG AAACTTTTACGGTGTCTTTATCCGTCTCTTCAGGTGTTCCACACCCTTGG GAAGGATCTCGAGGCCGTTGGCGACGTGATCGAAAAATGCGTCAACTTCC TCCTGGGGGTGAACACACCACACACCATGCTCTTCAGCACGGGCAGGGTG TTCTTGCTACCGCGGCAGCACCTGCAGGAGCCTCCGTTTGCAGTTGTCCC GGGTTTTCCAGAGGTTTCCGGACAGGTGAACGCGTGAACCCCGCCCCCTC ACTATCCCTGGCTACGTTATGTTGTGCGTGACACCAAGGAGGTGACAGTG AAGGGTGTGGTGTGTAAGATGTTTGCTCGGTATTTCTACCAGATGACTTC AATCAAGACTCAAAATTGAACTTGTCAAATAATAGTGTTGGCATGCACGC AGCTTTCGCTTTCGCTGTCTACGGAAACTGTTTCGCCTTTTGCATGATAT GCCTCCGCGCGGATGTACAAAACCCAGATTCGGTGAGACGCGCGCAGCGT CAAAGCGTTATATTGTCCCTTCGAAGGGAGGGTGGTTGCCCTGGTACGTG GTGCTCTAGCGTTGGCCGCGTAAAAAAAAAAGGTCAGATCGCGTTGACAT CCCACAACTCAATTTCGTGGCGGGGCCCTTGTCTCTCTCAGATCATCGTC ACCTCGGAAGGGGATTACGCGAAGCTAACGGCGGACGATATCTACAACTT CTGGCACGAGAAAATCGCTGTCGATGCCCGGGACTTCGACAGAATCGTTG ACGCCTGCATGACGTAAACAAATGAAAGCGCTGCGCACGTGAAATCCCGC GGCGTTCGGCTTTTCTGCAGCTTTTCGAGGGATGTTTCTGACGGGTAGTA CGAATTTGACTCCTCTCGAGATGCAGGAACAGTCGCCGTGTCTACACATT CGGAAGCAGAAAGCGGGGTCAAACAGTACATTATATTTTGCAAATCAGTA GTGTTTACGGCGCGGCGGGACGGCGACGTCTGGAAAACCTCCGAGCCAAG CCACGGATTTTCACCCCACATTTACGGAGACAGTGCTGACGACGCAGGGC AGAACGAGCGAGGGCAGTGCCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1430:98505..101176+

>mRNA_F-serratus_M_contig1430.3089.1 ID=mRNA_F-serratus_M_contig1430.3089.1|Name=mRNA_F-serratus_M_contig1430.3089.1|organism=Fucus serratus male|type=CDS|length=1164bp|location=Sequence derived from alignment at F-serratus_M_contig1430:98505..101176+ (Fucus serratus male)
ATGGACTACGCCGAGGCGTTAAGGAGCGAGCCCGGGTTCCGGTTAGGATT
TAACAGCGGCGGTTCGTCGGCTTCGGTCAACCATCTCCACTTCCAGATGG
ACTACGCCGAGGCGTTAAGGAGCGAGCCCGGGTTCCGGTTAGGATTTAAC
AGCGGCGGTTCGTCGGCTTCGGTCAACCATCTCCACTTCCAGTGCTGGTA
CTTCGATGCGTCGGAGACCGGAGGCCTCCCCATCGAGACCTCGGAGACGC
TGTACGTGGGATCTTTAGCGCTTCCCAGTGGGCACCGGGCGGATGCCGAC
GAGACGGCAAGAGATATGATGGACGTGTACACCTTGCAAGGCTACCCCCT
CAGGGGTTTGTGCTGGTACTTCGATGCGTCGGAGACCGGAGGCCTCCCCA
TCGAGACCTCGGAGACGCTGTACGTGGGATCTTTAGCGCTTCCCAGTGGG
CACCGGGCGGATGCCGACGAGACGGCAAGAGATATGATGGACGTGTACAC
CTTGCAAGGCTACCCCCTCAGGGGTTTGGTGTTCCACACCCTTGGGAAGG
ATCTCGAGGCCGTTGGCGACGTGATCGAAAAATGCGTCAACTTCCTCCTG
GGGGTGAACACACCACACACCATGCTCTTCAGCACGGGCAGGGTGTTCTT
GCTACCGCGGCAGCACCTGCAGGAGCCTCCGTTTGCAGTTGTCCCGGGTT
TTCCAGAGGTTTCCGGACAGGTGTTCCACACCCTTGGGAAGGATCTCGAG
GCCGTTGGCGACGTGATCGAAAAATGCGTCAACTTCCTCCTGGGGGTGAA
CACACCACACACCATGCTCTTCAGCACGGGCAGGGTGTTCTTGCTACCGC
GGCAGCACCTGCAGGAGCCTCCGTTTGCAGTTGTCCCGGGTTTTCCAGAG
GTTTCCGGACAGATCATCGTCACCTCGGAAGGGGATTACGCGAAGCTAAC
GGCGGACGATATCTACAACTTCTGGCACGAGAAAATCGCTGTCGATGCCC
GGGACTTCGACAGAATCGTTGACGCCTGCATGACGTAAATCATCGTCACC
TCGGAAGGGGATTACGCGAAGCTAACGGCGGACGATATCTACAACTTCTG
GCACGAGAAAATCGCTGTCGATGCCCGGGACTTCGACAGAATCGTTGACG
CCTGCATGACGTAA
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