mRNA_F-serratus_M_contig143.3079.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: D8LTN8_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN8_ECTSI) HSP 1 Score: 150 bits (378), Expect = 6.680e-46 Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGSR 231
QIWIKTLTGRKQQYSFEPDN VSMVKQ+LQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVA GGTIHMVLQLRGGSR
Sbjct: 2 QIWIKTLTGRKQQYSFEPDNQVSMVKQSLQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAPGGTIHMVLQLRGGSR 78
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: A0A836CG90_9STRA (Ubiquitin-related domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG90_9STRA) HSP 1 Score: 130 bits (326), Expect = 5.590e-38 Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 225
QIWIKTLTGRKQQ++FEP + V +VKQALQEKEGIQVDQIRLIYSGKQL+D+ TLS YNVAAGGTIHMVLQLRGG
Sbjct: 2 QIWIKTLTGRKQQFNFEPSDQVLLVKQALQEKEGIQVDQIRLIYSGKQLSDNQTLSQYNVAAGGTIHMVLQLRGG 76
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: A0A7S1V0J3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V0J3_9STRA) HSP 1 Score: 124 bits (310), Expect = 4.070e-35 Identity = 61/76 (80.26%), Postives = 69/76 (90.79%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGS 228
QI+IKTLTGRKQ ++FEP+N V VKQALQEKEGIQVDQIRLI+SGKQL+DD +L HYN+AAG TIHMVLQLRGGS
Sbjct: 34 QIFIKTLTGRKQAFNFEPENQVLAVKQALQEKEGIQVDQIRLIHSGKQLSDDKSLEHYNIAAGATIHMVLQLRGGS 109
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: M4BXH5_HYAAE (Ubiquitin-like domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=M4BXH5_HYAAE) HSP 1 Score: 121 bits (304), Expect = 1.270e-34 Identity = 62/75 (82.67%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 225
QI IKTLTGRKQ ++FEPDN + VKQALQEKEGIQVDQIRLIYSGKQLADD TL YNV GGTIHMVLQLRGG
Sbjct: 2 QIQIKTLTGRKQTFNFEPDNTILHVKQALQEKEGIQVDQIRLIYSGKQLADDKTLQDYNVEPGGTIHMVLQLRGG 76
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: A0A1E7FL88_9STRA (Putative ubiquitin-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL88_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.210e-34 Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGS 228
QI+IKTLTGRKQ +FEP+N V VKQ+LQEKEGIQVDQIRLI+SGKQLADD TL YN+AAG TIHMVLQLRGGS
Sbjct: 2 QIFIKTLTGRKQAMNFEPENQVLAVKQSLQEKEGIQVDQIRLIHSGKQLADDKTLESYNIAAGATIHMVLQLRGGS 77
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: A0A7S3L110_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L110_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.900e-33 Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 225
QI+IKTLTGRKQ ++FEP+N V +KQALQEKEGIQVDQI+LI+SGKQLAD++TL YN+AAG TIHMVLQLRGG
Sbjct: 47 QIFIKTLTGRKQAFNFEPENQVLAIKQALQEKEGIQVDQIKLIFSGKQLADNNTLESYNIAAGATIHMVLQLRGG 121
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: B8BQ41_THAPS (Ubiquitin-like domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ41_THAPS) HSP 1 Score: 116 bits (290), Expect = 1.890e-32 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGS 228
QI+IKTLTGRKQ ++FEP+N V VKQALQEKEGIQVDQIRLI+SGKQL+DD TL Y + AG TIHMVLQLRGG+
Sbjct: 1 QIFIKTLTGRKQAFNFEPENQVLAVKQALQEKEGIQVDQIRLIFSGKQLSDDRTLESYAINAGATIHMVLQLRGGA 76
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: A0A7S2K0B5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0B5_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.920e-32 Identity = 56/75 (74.67%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 225
QI+IKTLTGRKQ ++FEP+N V +KQA+QEKEGIQVDQI+LI+SGKQLADD ++S YN+ AG TIHMVLQLRGG
Sbjct: 32 QIFIKTLTGRKQAFNFEPENQVLQLKQAVQEKEGIQVDQIKLIFSGKQLADDKSISSYNITAGSTIHMVLQLRGG 106
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: A0A1Z5KRS6_FISSO (Ubiquitin-like domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRS6_FISSO) HSP 1 Score: 114 bits (285), Expect = 1.010e-31 Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGG 225
QI+IKTLTGRKQ +FEPD V +KQALQEKEGIQVDQI+LIYSGKQLADD +L Y+++AG TIHMVLQLRGG
Sbjct: 2 QIFIKTLTGRKQALNFEPDQHVLAIKQALQEKEGIQVDQIKLIYSGKQLADDKSLESYSISAGATIHMVLQLRGG 76
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Match: A0A024GPK4_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GPK4_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.740e-31 Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1
Query: 1 QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLADDHTLSHYNVAAGGTIHMVLQLRGGSR 231
QI IKTLTGRKQ ++FE +N + VK+ALQEKEGIQV+QIRLIYSG+QL+DD TL YNV AGGTIHMVLQLRGG +
Sbjct: 2 QITIKTLTGRKQTFNFEGENTILHVKEALQEKEGIQVNQIRLIYSGRQLSDDKTLQDYNVLAGGTIHMVLQLRGGQK 78 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig143.3079.1 >prot_F-serratus_M_contig143.3079.1 ID=prot_F-serratus_M_contig143.3079.1|Name=mRNA_F-serratus_M_contig143.3079.1|organism=Fucus serratus male|type=polypeptide|length=78bp QIWIKTLTGRKQQYSFEPDNMVSMVKQALQEKEGIQVDQIRLIYSGKQLAback to top mRNA from alignment at F-serratus_M_contig143:605656..606470- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig143.3079.1 ID=mRNA_F-serratus_M_contig143.3079.1|Name=mRNA_F-serratus_M_contig143.3079.1|organism=Fucus serratus male|type=mRNA|length=815bp|location=Sequence derived from alignment at F-serratus_M_contig143:605656..606470- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig143:605656..606470- >mRNA_F-serratus_M_contig143.3079.1 ID=mRNA_F-serratus_M_contig143.3079.1|Name=mRNA_F-serratus_M_contig143.3079.1|organism=Fucus serratus male|type=CDS|length=468bp|location=Sequence derived from alignment at F-serratus_M_contig143:605656..606470- (Fucus serratus male)back to top |