mRNA_F-serratus_M_contig143.3074.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: D8LTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP1_ECTSI) HSP 1 Score: 409 bits (1050), Expect = 9.400e-133 Identity = 210/375 (56.00%), Postives = 281/375 (74.93%), Query Frame = 1
Query: 772 KFEDFMGNSWDISMMVLYPVWRSVRLCFGVCLLFYGMAFRTLAFHIIVLRISGLRQVQKSLTQLGERYREARKAVREAAEAAEEIGDQLVKPDELKRTREKMVKEKDRLLADGVPSAQETAFFMRKYNKDLKKILDEQERFKSARGSLLSVNTAIDPQDVRTSLTSMYNALIASFTASTLQTAGQITLGLHIGSLLKTHLLDLAGPILDPIGYRLDLNTYFEDEKIPYMGKANAMGGPANMILNTICYSMVFVIFRIQPSVALKLSLVYYAGRVVTDYIVVGWDFVRRRLGWHMGIAHTPWSALIHIALTAAGLCFHRNALSSPGRGGTPIAVVGPGFIGMLEPLVRTMVRFSETMQSLDFFTVQFIQESYEAVK 1896
K ED + W +V PV RL FG+ LLFYGMAFRT AFH+IV RI+G++QVQ+++ +L +Y AR+++REAAEAAE +G+++VK D+L+ RE+M++EK RLL+DG S ++T +FM+KY +L KI +EQE F+SAR S+LS+ +++ P+ R+S +YNALIA FTAST+QTAGQ TLGLHIG+LLKTH+LDL GPI+DPIGYRLDL+ YF++E IPYMGKANAMGGP NM LN +CYS+VF +FR+ PSVALKLS+VYY GRVVTDY+V+ + RR+LG M I HTPWSA+IH LT G HR+AL + G VGPG +G++EP+VR V+ SE + ++FF +F+Q+ + VK
Sbjct: 8 KVEDALVTMWSYMAVVGVPVLHLGRLGFGLSLLFYGMAFRTFAFHVIVFRIAGMKQVQRAVRELVGKYASARRSIREAAEAAETVGERVVKGDDLQAARERMIEEKKRLLSDGFLSERDTTYFMKKYRAELLKIKEEQELFQSARSSVLSLRSSVGPRQARSSFNGVYNALIACFTASTIQTAGQFTLGLHIGNLLKTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMGGPRNMALNILCYSVVFAVFRVHPSVALKLSMVYYGGRVVTDYVVLFTEPARRKLG-QMTIVHTPWSAVIHAGLTILGYYCHRSALYTAEIPGLHPLAVGPGAVGLVEPVVRFAVKISEILSDIEFFRCKFVQDPVQMVK 381
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: A0A6H5JP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP85_9PHAE) HSP 1 Score: 404 bits (1037), Expect = 6.040e-128 Identity = 212/392 (54.08%), Postives = 286/392 (72.96%), Query Frame = 1
Query: 739 GGKP-KSILRLDKFEDFMGNSWDISMMVLYPVWRSVRLCFGVCLLFYGMAFRTLAFHIIVLRISGLRQVQKSLTQLGERYREARKAVREAAEAAEEIGDQLVKPDELKRTREKMVKEKDRLLADGVPSAQETAFFMRKYNKDLKKILDEQERFKSARGSLLSVNTAIDPQDVRTSLTSMYNALIASFTASTLQTAGQITLGLHIGSLLK-----THLLDLAGPILDPIGYRLDLNTYFEDEKIPYMGKANAMGGPANMILNTICYSMVFVIFRIQPSVALKLSLVYYAGRVVTDYIVVGWDFVRRRLGWHMGIAHTPWSALIHIALTAAGLCFHRNALSSPGRGGTPIAVVGPGFIGMLEPLVRTMVRFSETMQSLDFFTVQFIQESYEAVK 1896
GG P K+ L +D ED + W + V PV+ R FG+ LLFYGMAFRT AFH+IV RI+G++QVQ+++ +L Y AR+++REAA+AAE +G+++VK D+L+ RE+M++EK RLL+DG S +ET +FM+KY +L +I +EQE F+SAR S+LS+ +++ P+ R+S +YNALIASFTAST+QTAGQ TLGLHIG+LLK TH+LDL GPI+DPIGYRLDL+ YF++E IPYMGKANAM GP NM LN CYS+VF++F++ PSVALKLS+VYY RVVTDY+V+ + RR+LG M I HTPWSA+IH LT G C HRN L + G VGPG +G++EP+VR V+ SE + ++FF +F+++ E VK
Sbjct: 198 GGTPRKNRLMIDYVEDALVTMWSHMVNVGVPVFHLGRFGFGLSLLFYGMAFRTFAFHVIVFRIAGMKQVQRAVRELVGNYANARRSIREAAKAAETVGERVVKGDDLQAARERMIEEKKRLLSDGFLSKRETIYFMKKYRAELLRIKEEQELFQSARSSVLSLRSSVGPRQARSSFNGVYNALIASFTASTIQTAGQFTLGLHIGNLLKASYLLTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKANAMDGPRNMALNIFCYSVVFIVFQVHPSVALKLSMVYYGARVVTDYVVLVTEPARRKLG-QMTIVHTPWSAVIHAGLTILGYCCHRNVLYTAEVPGLHPLAVGPGAVGLVEPVVRFAVKISEILSHIEFFKCKFVEDPVEMVK 588
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: D8LTP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP3_ECTSI) HSP 1 Score: 321 bits (823), Expect = 2.890e-99 Identity = 181/379 (47.76%), Postives = 239/379 (63.06%), Query Frame = 1
Query: 751 KSILRLDKFEDFMGNSWDISMMVLYPVWRSVRLCFGVCLLFYGMAFRTLAFHIIVLRISGLRQVQKSLTQLGERYREARKAVREAAEAAEEIGDQLVKPDELKRTREKMVKEKD----RLLADGVPSAQE-TAFFMRKYNKDLKKILDEQERFKSARGSLLSVNTAIDPQDVRTSLTSMYNALIASFTASTLQTAGQITLGLHIGSLLKTHLLDLAGPILDPIGYRLDLNTYFEDEKIPYMGKANAMGGPANMILNTICYSMVFVIFRIQPSVALKLSLVYYAGRVVTDYIVVGWDFVRRRLGWHMGIAHTPWSALIHIALTAAGLCFHRNALSSPGRGGTPIAVVGPGFIGMLEPLVRTMVRFSETMQSLDFFTVQFI 1872
K+ + LD ED +G+ MV P RL FG+ LLFYGMAFRT AFH+IV RISG +QVQ S +L +YR+AR+++REAA A RLLA G +E T FM+KY+K+L I EQ S S++SV +++DP + R+SL +Y+ LI SFTAST QTAGQI LGLH+G+LLKTHLLDL GP+LDPIGYRLDL TY+++ +IPYMG NAM GP N+ +N CY++VF + R P +ALK ++VY+ RVVTDY+V+ + +RR+LG M HTPWS +I LT G +HR+ L + G VVGPG +G++EPLVR V SE + ++FFTV F+
Sbjct: 3 KNRIFLDNVEDILGSLGRRLQMVGKPALHLTRLGFGLSLLFYGMAFRTFAFHVIVFRISGFKQVQVSSGKLAAKYRKARQSIREAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRLLAHGRKLTKEDTRKFMKKYHKELTTIKQEQAAINSINSSMISVKSSVDPDNARSSLRGLYSGLITSFTASTYQTAGQIALGLHVGTLLKTHLLDLFGPMLDPIGYRLDLTTYYDEAEIPYMGNPNAMDGPHNLAMNIFCYALVFAVIRAHPPLALKTAMVYFGARVVTDYLVMTAEPIRRKLGL-MTAVHTPWSGMIQAGLTVLGFYYHRHTLHTASVTGFHPLVVGPGVVGLVEPLVRVAVWVSEVLHRIEFFTVNFV 380
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: A0A6H5JS93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS93_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.370e-74 Identity = 132/267 (49.44%), Postives = 176/267 (65.92%), Query Frame = 1
Query: 1075 MVKEKDRLLADGVPSAQE-TAFFMRKYNKDLKKILDEQERFKSARGSLLSVNTAIDPQDVRTSLTSMYNALIASFTASTLQTAGQITLGLHIGSLLKTHLLDLAGPILDPIGYRLDLNTYFEDEKIPYMGKANAMGGPANMILNTICYSMVFVIFRIQPSVALKLSLVYYAGRVVTDYIVVGWDFVRRRLGWHMGIAHTPWSALIHIALTAAGLCFHRNALSSPGRGGTPIAVVGPGFIGMLEPLVRTMVRFSETMQSLDFFTVQFI 1872
M+ EK RLLA G +E T FM+KY S +++DP + R+SL +YN LI SFTAST QTAGQI LGLH+G+LLKTHLLDL GP++DPIGYRLDL TY+++E+IPYMG ANAM GP N+ +N CY++VFV+ R P ++LK++++Y+ RVVTDY+V+ + +RR+LG M HTPWS LI LT G +HR+ L + G VVGPG +G++EPLVR V SE + ++FFTV F+
Sbjct: 1 MIDEKHRLLAHGRKLTKEDTRKFMKKYQ---------------------SKRSSVDPDNARSSLRGLYNGLITSFTASTYQTAGQIALGLHVGTLLKTHLLDLFGPMVDPIGYRLDLTTYYDEEEIPYMGNANAMDGPHNLAMNIFCYALVFVVIRAHPPLSLKMAMIYFGARVVTDYLVMVAEPIRRKLGL-MTAVHTPWSGLIQAGLTVLGFSYHRHTLHTASVTGFHPLVVGPGAVGLVEPLVRVAVWVSEVLHRIEFFTVNFV 245
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: D7FJ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ41_ECTSI) HSP 1 Score: 186 bits (473), Expect = 3.000e-48 Identity = 124/327 (37.92%), Postives = 177/327 (54.13%), Query Frame = 1
Query: 760 LRLDKFEDFMGNSWDISMMVLYPVWRSVRLCFGVCLLFYGMAFRTLAFHIIVLRISGLRQVQKSLTQLGERYREARKAVREAAEAAEEIGDQLVKPDELKRTREKMVKEKDRLLADGVPSAQETAFFMRKYNKDLKKILDEQERFKSARGSLLSVNTAIDPQDVRTSLTSMYNALIASFTASTLQTAGQITLGLHIGSLLKTHLLDLAGPILDPIGYRLDLNTYFEDEKIPYMGKANAMGGPANMILNTICY---SMVFVIFRIQPSVALKLSLVYYAGRVVTDYIVVGWDFVRRRLGWHMGIAHTPWSALIHIALTAAGLCFHRNA 1731
L LD E F S +++ LYP+W ++R FG+ LLFYG F TLAFHI+V RISG ++ KS +L Y++AR+ + +AA+ + + D A G SA+E F+ KY D++ I EQE S+L++ A+ + + S+ S+Y A+I S TAST + AGQ+TL L G L+K L DL GP++DPIGY+++L TY AN M GPAN+ + Y + VF F + P AL ++ V RVVTDYIV + VR R G + + P SA+I++ L + G FH NA
Sbjct: 86 LWLDVVEPFFA-SVSLAISSLYPLWHTLRGMFGLSLLFYGEDFATLAFHIVVFRISGWKKAAKSKDELVAYYKKARQTMTKAAKDVRASAAIIARKDRXXXXXXXXXXXXXXXHAIGRVSAEEARAFIDKYRNDIEIIAREQEVLAETSSSILAIKGALSFKKLAASVNSLYAAVITSITASTFKRAGQLTLALTCGGLIKRALFDLLGPVIDPIGYQIELETYV----------ANIMRGPANLYITLAGYVSSASVFFHFFVDPQQALTITFVLLGARVVTDYIVAALNPVRWRFGMSKKLDNMPISAVIYLLLASLGFIFHGNA 401
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: A0A835YUQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUQ5_9STRA) HSP 1 Score: 168 bits (426), Expect = 4.490e-42 Identity = 106/310 (34.19%), Postives = 175/310 (56.45%), Query Frame = 1
Query: 805 ISMMVLYPVWRSVRLCFGVCLLFYGMAFRTLAFHIIVLRISGLRQVQKSLTQLGERYREARKAVREAAEAAEEIGDQLVKPDELKRTREKMVKEKDRLLADGVPSAQETAFFMRKYNKDLKKILDEQERFKSARGSLLSVNTAIDPQDVRTSLTSMYNALIASFTASTLQTAGQITLGLHIGSLLKTHLLDLAGPILDPIGYRLDLNTYFEDEKI-PYMGKANAMGGPANMILNTICYSMVFVIFRIQPSVALKLSLVYYAGRVVTDYIVVGWDFVRRRLGWHMGIAHTPWSALIHIALTAAGLCFHRNA 1731
+++ L PVWR V+L FG+ +LFYG F+T+AFHII+ RISG + V K L Y++ARKA AA + + L + + RE M++++ +L DG +A+E F+ ++ ++++ I +Q++ +A S++++ TAI + + T+L +Y AL+ S TAST + AG+ T+ L+ G +LK ++ L GP +DP+ Y +L T E + P +A G A L T+ Y P AL+LSL + VV Y+ + D + RR ++ +P SA++H+ LTA G +H +A
Sbjct: 58 VAISALTPVWRLVKLLFGISILFYGSNFQTIAFHIIIFRISGYKSVIKHCRDLVSHYKKARKATALAARHTLSLNESLAQQKLRREEREHMLRDRQEMLRDGRITAEEARQFITRHRQEIRAIAAQQDQLAAASSSIMALRTAIPWKALSTTLRDLYAALVTSVTASTFKAAGRFTMALYCGDVLKRDVIALLGPCIDPLSYEAELCTDLESIMMGPAAARATFAGVAATAALLTMFYR--------DPEWALQLSLCFLGSSVVIGYLEMVLDPLARRFKVRQ-LSRSPLSAILHLLLTAVGWRYHCHA 358
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: A0A835Z8D7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8D7_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.210e-32 Identity = 98/307 (31.92%), Postives = 167/307 (54.40%), Query Frame = 1
Query: 814 MVLYPVWRSVRLCFGVCLLFYGMAFRTLAFHIIVLRISGLRQVQKSLTQLGERYREARKAVREAAEAAEEIGDQLVKPDELKRTREKMVKEKDRLLADGVPSAQETAFFMRKYNKDLKKILDEQERFKSARGSLLSVNTAIDPQDVRTSLTSMYNALIASFTASTLQTAGQITLGLHIGSLLKTHLLDLAGPILDPIGYRL-DLNTYFEDEKI-PYMGKANAMGGPANMILNTICYSMVFVIFRIQPSVALKLSLVYYAGRVVTDYIV-VGWDFVRRRLGWHMGIAHTP-WSALIHIALTAAGLCFH 1722
+V P+WR +L FG+ +LFYG+ F+TLA HII+ RISG + V + + +L Y + R A AA+ + + + L + + + REKM+ ++ ++L DG +A+E F+ K+ ++L+ + +QE+ ++ SL+++ +AI + V +L +Y A IAS TAST + AG+ T+ ++ G L+ + L GP +DP+ Y++ ++ E + P +A G A +L V+F +P+ ALK+SL Y VV Y+ V F R G+ P + L H+ + G FH
Sbjct: 40 LVTTPLWRVTKLLFGLSILFYGLNFKTLALHIIIFRISGYKDVMQHMGELQSHYTKVRAATEAAAKNTKSLNESLAQKAKRREAREKMLVDRQQMLKDGRITAEEAQAFIAKHREELEIMAAQQEQLQATGSSLVALRSAIRWKAVGKTLRKLYEATIASITASTFEAAGRFTMAMYCGDALRDDMRTLLGPSIDPLAYQVAEVKGNVESIMMGPSAARAAFFGLAATAVL--------LVMFYEEPNWALKVSLCYLGSGVVVGYLKSVVCPFAERA-----GVRLRPRYWVLAHLLIMGVGWRFH 333
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Match: A0A6H5JP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP14_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.450e-10 Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 772 KFEDFMGNSWDISMMVLYPVWRSVRLCFGVCLLFYGMAFRTLAFHIIVLRISGLRQVQKSLTQLGERYREARKAVREAAEAAE 1020
K ED +G+ MV P RL FG+ LLFYGMAFRT AFH+IV RISG +QV SL +L +YR AR+++R AA AAE
Sbjct: 160 KVEDVLGSLGRWLQMVGRPPLHLARLGFGLSLLFYGMAFRTFAFHVIVFRISGFKQV--SLGKLAAKYRNARQSIRAAAAAAE 240 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig143.3074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig143.3074.1 >prot_F-serratus_M_contig143.3074.1 ID=prot_F-serratus_M_contig143.3074.1|Name=mRNA_F-serratus_M_contig143.3074.1|organism=Fucus serratus male|type=polypeptide|length=604bp MLAVIDMLSVQVDAPEEDTALRQAAARSNKCCNMIRPVRLMTSMMVGLEVback to top mRNA from alignment at F-serratus_M_contig143:431945..458353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig143.3074.1 ID=mRNA_F-serratus_M_contig143.3074.1|Name=mRNA_F-serratus_M_contig143.3074.1|organism=Fucus serratus male|type=mRNA|length=26409bp|location=Sequence derived from alignment at F-serratus_M_contig143:431945..458353+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig143:431945..458353+ >mRNA_F-serratus_M_contig143.3074.1 ID=mRNA_F-serratus_M_contig143.3074.1|Name=mRNA_F-serratus_M_contig143.3074.1|organism=Fucus serratus male|type=CDS|length=3624bp|location=Sequence derived from alignment at F-serratus_M_contig143:431945..458353+ (Fucus serratus male)back to top |