mRNA_F-serratus_M_contig1429.3059.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 213 bits (541), Expect = 4.970e-64 Identity = 115/304 (37.83%), Postives = 180/304 (59.21%), Query Frame = 1
Query: 25 MVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSG--NCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDL--DTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECT----------NCPAWYIVKQHLQS-LHQQTPNNATGVF--SNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
M K+GG+T+K +L +T+ + Y + WL+G A++ + +++G Y E LRP G C+WFTIFRHP+PRLVSA+FYCK +D LCA +D D DL +FAEHWG++GLRQ+AL F+ EE+L + + T +CP WY +K +LQ L +Q + + S A+ + ++ +L+P E++++ Y AVG+LE T++ LF+ ALGM F+W ++ KN D +EE +L +WT+P + R++SLDL LY+YA ++ +Q+++YGL
Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKD---FAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCK-KKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 203 bits (517), Expect = 2.600e-59 Identity = 125/325 (38.46%), Postives = 177/325 (54.46%), Query Frame = 1
Query: 4 RCWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDG-----IIYGGYAEALR------PIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEI---LTSP--------FARECTNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYG------LDNI 894
RCW+F+H+ K+GGTT+K LL ST Y + W KG QG AE++ S+ GGY EALR P + CRWFT+FRHPV RLVSA++YC+ + D LCA + + VDL++FA HWGN+ LRQ+ALGF+S++++ L SP A + P WY++K L N+ +GV + SP + L + P ++++ Y VGILED T+ LFDSAL M W E + N D + K E+ +L +A ++P I++ +SLDL LY A I+ +Q YG LDN+
Sbjct: 87 RCWIFNHLQKAGGTTVKRLLFDSWGSEST---TYDSYQWKKG-QG--YAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCRE-DPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFL--------NDRSGVADDTSP-EGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGIAQHGGLDNV 395
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 196 bits (498), Expect = 4.050e-57 Identity = 112/304 (36.84%), Postives = 159/304 (52.30%), Query Frame = 1
Query: 7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEI----LTSPFARECTN-----CPAWYIVKQHLQSLHQQTPNNATGVFSNASPTD-EYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKR-KSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
CWVF HM KSGG T++ ++ F + + + W G AE YGGY E LR + D +C+WFT+FRHPV R+VSA+FYC+ + D LCA +D VDLL+FAEHWGNYGLRQ+AL + E++ + S F ++ PAWY K +L HQ PT E L L A E +S+RY AVGI+E+ +M LF+ L + F+W E Q KN + ++ + L AW +P + +FI LD+ LY++A ++ Q+ G+
Sbjct: 52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEW---SSGRSYAETFVKENAVFTYGGYTEGLR-MYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHH-DQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQD---------DFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 192 bits (488), Expect = 7.310e-56 Identity = 115/296 (38.85%), Postives = 167/296 (56.42%), Query Frame = 1
Query: 7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYS---LHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
CWVF H K+GGTT+K L + E + + + + +GD+G +++ +I GGYAE LR G C+WFT+ RHP+ RL+SAF+YC NR D LCA + + D+ FA+HWGNY L Q+ALG + EI FA E + PAW+ K + + N +T +N + DE+ + IL+P E++ S Y AVGILE +M LFD AL + FNWTV + +L + K E+ A+L A T+P + +++ LDL LYEYA ++ +QL +Y L
Sbjct: 37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGI---QDLLNDKPVLIAGGYAEGLRTSAFQG-CKWFTMMRHPIARLISAFYYCSGGNR-DQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEI----FAEE-VDAPAWFKAKLYFEGRLGYPGNMSTA--TNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIV-EKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 196 bits (497), Expect = 1.090e-55 Identity = 118/315 (37.46%), Postives = 177/315 (56.19%), Query Frame = 1
Query: 4 RCWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQ-----GTRLAENIFTSVDGIIYGGYAEALR---PIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNE---EILTSPFAR-----ECTNCPAWYIVKQHLQSLHQQT-----PNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
+CWVF H+ K GG+T+K +L R +R S Y + W GD G +LA ++ GGY EALR P+ D+G CR+FT+FRHP+ R+VSA+FYC+ D CA + +D VDLL+FA+HWGN+ +RQ+ALGF+ ++ E + +P A+ + WY +K +L+ + + A V +A+ T E L+ +L+PA+++I S Y AVGILE TT+ LFD AL + W + + D K K E L +AWT+ + +++ LDL LYE+A ++ +Q YGL
Sbjct: 155 QCWVFMHLQKCGGSTVKYMLRR---SYGSRYSIYDSNQWKLGDDISANFGVKLARG---ETWNVMAGGYTEALRRSEPV-DAG-CRFFTLFRHPIARMVSAYFYCR-STLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 189 bits (480), Expect = 3.480e-53 Identity = 108/305 (35.41%), Postives = 168/305 (55.08%), Query Frame = 1
Query: 4 RCWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQ-----GTRLAENIFTSVDGIIYGGYAEALRPIRDSG-NCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTNCPAWYIVKQHLQSLHQQT-----PNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
+CWVF H+ K GG+T+K LL +R +R Y + W GD+ G +LA ++ GGY EALR G CR+FT+FRHP+ R+VSA+FYC+ ++ D CA + + VDLL+FA+HWGN+ LRQ+ALGF+ ++++ Y +K +L+ ++ A +A+ T + L+ +L+PA++++ Y AVGILE TT+RLFD L M NW + + D+ K E L +AWT+ + +++ LDL LYE+A ++ +Q +GL
Sbjct: 176 QCWVFMHLQKCGGSTVKDLLE---DRWGSRFFIYDSMRWKFGDEFSAKFGAKLA---LGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSG-DVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE-------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 182 bits (463), Expect = 3.740e-52 Identity = 106/297 (35.69%), Postives = 161/297 (54.21%), Query Frame = 1
Query: 7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYS---LHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKN-EDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
CWV+ M K+GGT+I+ ++ + ++T E+ + + GD+G + I +I+G Y E LRP C+WFT+ RHP+ RLVSAF YC + D LCA + D+ FAEHWGN+G+ Q+AL F +IL + P WY K + + + P+ T +N S D + IL+P E++ S+Y AVGILE T+M LFD AL + FNWT + + +N D K K++ +L + T+P + + + LD+ LYE+A ++ QL +YGL
Sbjct: 37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGV---QQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVP-SDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTE-----VKSPPWYKAKLYFEG--RLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND---LLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.740e-42 Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 1
Query: 250 FRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFARECTN----CPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSEEHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGL 885
++ P+PRLVSA+FYCK N D LCA + DL +FA+HWGNYGLRQ++L F+ E++ + R P WY VK++ ++ A + +++ ++ +L+P +++S Y+AVGILE T+M LF+ AL + FNW ++NL KN D + EE L AW +P + + + LD+ LY++A ++ KQ+E++G+
Sbjct: 18 YKCPIPRLVSAYFYCK-QNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERA--LMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 156 bits (394), Expect = 4.430e-40 Identity = 96/299 (32.11%), Postives = 158/299 (52.84%), Query Frame = 1
Query: 7 CWVFHHMVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFAREC-TNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSE----EHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGLD 888
CW+F HM KSG + + + TER + W +GD A ++ S +++GG E+LR ++ +C+W TIFRHP+ RL+SA+ +C KDP+C ++ L+ FAE WGN+ +RQ+AL +S + R+ T WY+VK++L + ++ L ++LEP ++S++Y AVGI +++ TTM LF AL M +W+ L NE++K+ SE E +A NP I+ + LD++LYE+A ++ Q+ Q+G++
Sbjct: 273 CWIFMHMDKSGASGARRVA---TERWRKDELVFDTVQWRRGDG---FAADVMASHWKLLHGGCVESLRNHKER-SCKWLTIFRHPIARLLSAYHHCLEAP-KDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYL---------------ARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGI-NEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 137 bits (344), Expect = 4.070e-35 Identity = 91/293 (31.06%), Postives = 149/293 (50.85%), Query Frame = 1
Query: 25 MVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDGIIYGGYAEALRPIRDSGNCRWFTIFRHPVPRLVSAFFYCKYMNRKDPLCAQDTIDLDTVDLLSFAEHWGNYGLRQYALGFLSNEEILTSPFAREC-TNCPAWYIVKQHLQSLHQQTPNNATGVFSNASPTDEYSLHAILEPALEVISSRYTAVGILEDMTTTMRLFDSALGMNHFNWTVETQNLRAKNEDLKRKSE----EHAILHEAWTNPAIIRFISLDLTLYEYATKIYAKQLEQYGLD 888
M KSG + + + TE+ + W +GD A ++ S +++GG E+LR + +C+W TIFRHP+ RL+SA+ +C KDP+C ++ L +FAE WGN+ +RQ+AL +S + R+ T WY+VK++L + ++ L + LEP ++S++Y AVGI +++ TTM LF AL M +W+ L ED K+ SE E +A NP I+ + LD++LYE+A ++ Q+ Q+G++
Sbjct: 1 MDKSGASGARRVA---TEQWRKDELVFDTVQWRRGDG---FAADVMASRWKLLHGGCVESLRNHKGR-SCKWITIFRHPIARLLSAYDHCLGAP-KDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYL---------------ARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEED-KQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1429.3059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1429.3059.1 >prot_F-serratus_M_contig1429.3059.1 ID=prot_F-serratus_M_contig1429.3059.1|Name=mRNA_F-serratus_M_contig1429.3059.1|organism=Fucus serratus male|type=polypeptide|length=291bp MVKSGGTTIKGLLHRFTERSSTRRSEYANAMWLKGDQGTRLAENIFTSVDback to top mRNA from alignment at F-serratus_M_contig1429:225050..226492+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1429.3059.1 ID=mRNA_F-serratus_M_contig1429.3059.1|Name=mRNA_F-serratus_M_contig1429.3059.1|organism=Fucus serratus male|type=mRNA|length=1443bp|location=Sequence derived from alignment at F-serratus_M_contig1429:225050..226492+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1429:225050..226492+ >mRNA_F-serratus_M_contig1429.3059.1 ID=mRNA_F-serratus_M_contig1429.3059.1|Name=mRNA_F-serratus_M_contig1429.3059.1|organism=Fucus serratus male|type=CDS|length=1746bp|location=Sequence derived from alignment at F-serratus_M_contig1429:225050..226492+ (Fucus serratus male)back to top |