mRNA_F-serratus_M_contig1422.3036.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 290 bits (741), Expect = 2.360e-91 Identity = 147/276 (53.26%), Postives = 198/276 (71.74%), Query Frame = 1
Query: 19 FRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
F +V L +A P RR L+ +M EI +L+ VA ML +YV++TTDGWTSR+NESY+S TV Y++ W++ L+L+C+K G+T G+DLA+ I +MI+ HGLTG V C TDCEPSMVKAGR+L + L H+GC+ HR+E T+ VF+G + ++A ARAVV RY +SSQ +GRL GI+ + PL V+QDVETRWWS+ +MIERL+YL +A++LHES DN+AP+L DW VL L+EP+L PFM QK LE + VTGS+ VP I +L
Sbjct: 34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGEL 308
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 285 bits (729), Expect = 2.420e-89 Identity = 140/273 (51.28%), Postives = 192/273 (70.33%), Query Frame = 1
Query: 28 MVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
MV L RA +P RR L++RM + L+ VA ML ++V++TTDGWTSR NESY+S TV Y++ +WK+ L+L C+K G T G+DLA + M++ H LTG V+ C TDCEPSM+KAGR+L D + + H+GC+ HR+E T+ VF+G + ++ LAR +V RY KSSQ A RL +LCGI+ + PL V+QDVETRWWST +M+ RL+YL +A++LHES+D V PLL DW VL L+EP+L PFM QK LE + VTGS+ + + +L
Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAEL 272
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 275 bits (702), Expect = 3.480e-86 Identity = 133/281 (47.33%), Postives = 194/281 (69.04%), Query Frame = 1
Query: 1 VVDNKFFRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
+V+N+ F +MVR LK RA++P +R+ + ++ + L V L G++V++T+DGWTS +N++Y+ FT Y++ ++ +V L + C K G T G+DL +++K MI +GLT V TDCEPSMVKAGR+L ++ + H+GC CHR+E +T+ F GPGV K++ALAR VVTRY SSQA+ RL+++ IV + KV+QDVETRWWST + I RL+ LRR + HE +D++ PLL DW VL+++EP+ PF+ QK E S +VT SLV+P I DL
Sbjct: 1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 248 bits (633), Expect = 2.700e-72 Identity = 121/237 (51.05%), Postives = 164/237 (69.20%), Query Frame = 1
Query: 133 LMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
+ G++V++T+DGWT +N++Y+SFT Y++ ++ +V L L C K T G+DL +++K MI +GLTG V TDCE SMVKAGR+L ++ + H+GC CHR+E +T+ F GPGV K++ALAR VVTRYT SSQA+ RL+++C IV + V+QDVETRWWST I RL+ LRR + HE +D+ PLL DW VL+L+E +L PFM QK LE S VT LV P I DL
Sbjct: 1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADL 237
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 212 bits (540), Expect = 4.270e-63 Identity = 107/223 (47.98%), Postives = 143/223 (64.13%), Query Frame = 1
Query: 175 SRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDL 840
S +N++Y++FT Y++ ++ +V L L K G T G+DL +++K MI +GLTG V TDCEP MVKAGR+L ++ + H+GC CHR E +T+ F GPGV K++AL R VVTRYT SSQA+ RL+++C IV + KV+QDVETRWWST +D++ PLL DW VL+L+EP+L PFM QK LE S VT SLV I DL
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADL 209
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 181 bits (458), Expect = 3.250e-48 Identity = 100/239 (41.84%), Postives = 148/239 (61.92%), Query Frame = 1
Query: 28 MVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDA-VLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGI-VGIIPLKVIQDVETRWWSTQSMIERLVY-LRRAVELHESLDNVAPLLGPVDWNV 735
MV ++ A +P+++ +T M + + V+ ++ G+ V +T+DGWTS AN++Y+S T + WK+VTL++ CSK +G T GD LA IK + HGLTG V TDCEPSMVK GR+L DA V +GC +R+E +++VF+GP VKK M LAR +VTRY SSQAA RL++ +G+ +VIQDV T S++ +Y LR ++E +++D++ L D NV
Sbjct: 1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVTG-----SLVVPFIYDLRNSLE--DAIDDLVELPPDSDANV 232
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI) HSP 1 Score: 120 bits (300), Expect = 5.350e-27 Identity = 78/283 (27.56%), Postives = 141/283 (49.82%), Query Frame = 1
Query: 1 VVDNKFFRDMVRTLKGRASIPQRRVLITRM-----EEILVDLQGSVATMLMGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESL-DNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESNNV-TGSLVVPL 828
VV++ FR+ + L +P R + + EE L D + + T G+ +TTD WTS E+YI T ++++++K+ +L L CSK + K +D+A ++K + + G+ +++ +D +M KA + L + H GC H I + ++ + + +V + +S A +L PLK+IQ+V+TRW ST M+ER V L A++ ++ D P L +W +L+ + +L P+ V K + + T ++V+PL
Sbjct: 132 VVEDTGFRNFISALNPSYELPNRHTISKTLLPALYEECLNDTKKKILT---GKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPL 408
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: UPI000B936FE6 (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B936FE6) HSP 1 Score: 117 bits (294), Expect = 2.760e-26 Identity = 87/282 (30.85%), Postives = 143/282 (50.71%), Query Frame = 1
Query: 1 VVDNKFFRDMVRTLKGRASIPQRRVLITRMEEILV-DLQGSVATMLM--GQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIE-CVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIP-LKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPLLGPVDWNVLELLEPVLAPFMYVQKKLESN-NVTGSLVVPL 828
+V++K F +++ L +P R+ L T + +L + V + ++ G +VS+TTDGWTS NESYI+ T ++N+D K+ + LSC + D+L +I+ GL V C +D ++ KA D HV C H + V + + VK+ ++ +V + KSS AAG+L+ + +G P L +IQDV TRW ST M +R++ L+ + + N L DWN++ +L PF + ++ S +VT S +V L
Sbjct: 141 IVEDKEFGKLLKMLNPGYDLPSRKTLSTSLLSVLYNETYDKVKSDIVENGNFVSITTDGWTSVKNESYIAVTTHFINNDCKLKSYLLSCFMYSESHTSDNLKNEHLRVIREWGLEHKVSACTSDNASNITKA----IDLCKWRHVRCFAHSLNLAVQNAIKEIQEVKEKVS---GIVRHFKKSSTAAGKLKSIQEQLGYSPPLVLIQDVVTRWNSTFEMFQRVLDLKIPLSTALAETNYNEFLSNNDWNIITRACELLKPFKEITTEISSEKSVTVSKIVVL 415
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: X1WY43_ACYPI (DUF659 domain-containing protein n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WY43_ACYPI) HSP 1 Score: 112 bits (280), Expect = 1.510e-25 Identity = 66/226 (29.20%), Postives = 121/226 (53.54%), Query Frame = 1
Query: 4 VDNKFFRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMG-QYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWST-QSMIERLVYLRRAV 675
V+NK FR ++ T++ +IP R+ + TR+E++ +D S+ ++ Y+S+TTDGWTS A +SY++FTV Y +D+WK+ ++ LS + Q + ++L SI +I++ L + + D ++ A ++ D + + C H ++ D + + A +V + +SS+ L+ L ++Q TRW ST +M++RL+ LR AV
Sbjct: 41 VENKGFRSLISTIEPLYTIPSRKSITTRIEKMYIDKSQSIRNIIENINYISLTTDGWTSTAIDSYLTFTVHYFDDNWKLYSVTLSIEEIQESHTAENLKDSIMNVIESWNLNNKITGISHDNAANISNAVKLFYDQDIYSN-RCAAHTLQLAVKKCLDLNTCRPLLKTASKIVASFRQSSKRTYALENYLVEKSCKKLNLVQSCPTRWNSTLDNMLKRLLELRSAV 265
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Match: A0A3Q2CC25_CYPVA (Uncharacterized protein n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=A0A3Q2CC25_CYPVA) HSP 1 Score: 114 bits (284), Expect = 6.030e-25 Identity = 88/282 (31.21%), Postives = 137/282 (48.58%), Query Frame = 1
Query: 1 VVDNKFFRDMVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQY--VSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGATKGDDLAKSIKTMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDG-PGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLKVIQDVETRWWSTQSMIERLVYLRRAVELHESLDNVAPL-LGPVDWNVLELLEPVLAPFMYVQKKLESN-NVTGSLVVPLI 831
+V++K F+D V+TL R +IP R+ LI R L + S +G+ V +TTD WTSRA E Y++ T +N+ W+M L S G +++ + +++ G+ +V TD +MV A R A H C H + V F PG+ + + A+V+ + S+ AA +L+E+ K++Q VETRW S M ERL + AV L L L +W+ + L L PF V K++ + +V+ S VVPL+
Sbjct: 65 IVEDKGFQDFVKTLDSRYNIPSRKSLIERKLPALYEDCSSRVRKALGEVDNVVLTTDMWTSRATEGYLTVTSHIINEHWQMEAYVLETSSFPGQHTAENICSQLTRIVEEWGIKDKIVAVVTDNGANMVAAVR----KAGWAHYPCFAHTLNLVVKDSFKAVPGLLEIQKKSSAIVSFFHHSTTAASKLKEIQKQQKFPEKKLLQSVETRWNSLFYMWERLSEQKDAVTTVLCLLGKTSLCLSQEEWSEISLSLNALRPFEEVTKEISAEKHVSISKVVPLV 342 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1422.3036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1422.3036.1 >prot_F-serratus_M_contig1422.3036.1 ID=prot_F-serratus_M_contig1422.3036.1|Name=mRNA_F-serratus_M_contig1422.3036.1|organism=Fucus serratus male|type=polypeptide|length=271bp MVRTLKGRASIPQRRVLITRMEEILVDLQGSVATMLMGQYVSMTTDGWTSback to top mRNA from alignment at F-serratus_M_contig1422:4378..5217- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1422.3036.1 ID=mRNA_F-serratus_M_contig1422.3036.1|Name=mRNA_F-serratus_M_contig1422.3036.1|organism=Fucus serratus male|type=mRNA|length=840bp|location=Sequence derived from alignment at F-serratus_M_contig1422:4378..5217- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1422:4378..5217- >mRNA_F-serratus_M_contig1422.3036.1 ID=mRNA_F-serratus_M_contig1422.3036.1|Name=mRNA_F-serratus_M_contig1422.3036.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig1422:4378..5217- (Fucus serratus male)back to top |