mRNA_F-serratus_M_contig142.3025.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: D8LPT2_ECTSI (Mannose-P-dolichol utilization defect 1 protein homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPT2_ECTSI) HSP 1 Score: 192 bits (489), Expect = 2.350e-54 Identity = 93/140 (66.43%), Postives = 115/140 (82.14%), Query Frame = 2
Query: 452 SSTSAYGEIVTIFLQNAILVLLMWRFMKDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYW 871
S SAYGEI+TI +QN ++VLL+W +MK+RPS LGI ++A F+ T CA + +++ LLP SNLPLI+VAKVPQI+ N NGHTGQLA++TT+LNFVGA++RILTTIQEVGWDLGLL MHGLSS LNG LALQ+ LYW
Sbjct: 86 SPFSAYGEIMTILVQNIVIVLLLWYYMKNRPSALGIVGLMAVFLGTTVGCATLKMEHLMLLPYSNLPLIVVAKVPQIMINHDNGHTGQLASVTTMLNFVGATIRILTTIQEVGWDLGLLWMHGLSSFLNGVLALQVVLYW 225
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: A0A835YUU5_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUU5_9STRA) HSP 1 Score: 160 bits (405), Expect = 4.420e-42 Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2
Query: 452 SSTSAYGEIVTIFLQNAILVLLMWRFM--KDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERTAQWSAVQAQKKTA 919
S SAYGE++TI +QN +LV+L+W +M ++RP+ G A +I GF A CA +P +Y+ LLPL+NLPLI+VA++PQI+ +NGHTGQLA IT +N G ++R+LTTIQEVGWD GLL +G S + NG L +QI YW T ++ + +KK A
Sbjct: 94 SPLSAYGEVLTILVQNLVLVVLLWAYMTPQERPALAGRAFVIMGFATIAVGCAALPPEYLHLLPLTNLPLILVARIPQILTIYQNGHTGQLAFITMAMNVAGTALRMLTTIQEVGWDKGLLIQYGTSLVFNGILFVQILYYWGATNKFVDSEDKKKVA 251
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: A0A7S2V5B2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5B2_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.360e-32 Identity = 70/155 (45.16%), Postives = 99/155 (63.87%), Query Frame = 2
Query: 452 SSTSAYGEIVTIFLQNAILVLLMWRFMKDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERTAQWSAVQAQKKT 916
S SA+GE+++IF+QN +LV L+WR+ K +++A F A A AC P L+PL+N+P+I++A+VPQI+ N KNGHTGQLA IT +N G+ R+LTTI EVG D GL+ + + S LN + LQ+ YW+ T + Q KKT
Sbjct: 94 SPWSAFGEVISIFVQNLVLVGLLWRYAKPTIGLTSRLLVLAVFAAIAAACWYCPPSLQPLIPLANVPVIVMARVPQILLNFKNGHTGQLAFITVCMNAFGSLSRVLTTIIEVGGDWGLVLSYSVGSSLNTFIFLQMLYYWKNTENFQK-QMDKKT 247
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: A0A5D6XZP8_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZP8_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.770e-27 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 2
Query: 461 SAYGEIVTIFLQNAILVLLMWRFMKDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERTAQWSAVQAQKK 913
S +GE + I QN +LVLL+W ++ + + ++ FVA + P +Y LL + +P+ IVA++PQIV+N K GHTGQLA +T +LNF G+ RI TT+QE G + LL G+ LLNG L LQ+ L+W T + AV A+KK
Sbjct: 121 STWGENLIILAQNIVLVLLLWTYVTPKIAYSTRLALVVAFVAVTAGALLTPPEYQWLLASAGIPVSIVARIPQIVSNFKQGHTGQLAFVTLVLNFGGSVARIFTTLQETGDPVQLLGF-GVGILLNGTLVLQVLLFWGATNKALAVAAKKK 270
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: D0NCC3_PHYIT (Mannose-P-dolichol utilization defect 1 protein homolog n=11 Tax=Phytophthora TaxID=4783 RepID=D0NCC3_PHYIT) HSP 1 Score: 115 bits (288), Expect = 2.290e-25 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 2
Query: 461 SAYGEIVTIFLQNAILVLLMWRFMKDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERTAQWSAVQAQKK 913
S +GE V I QN ILVLL+W F + + ++ F A A IP +Y LL + +P+ IVA++PQI++N K GHTGQLA IT +LNF G+ R+ TT+QE G D ++ G++ LLNG L LQ+ L+W T + A +KK
Sbjct: 120 STWGENVVILAQNIILVLLLWSFYTPKIAVSPRFGLVLAFAAIAAGMFSIPDEYQWLLASAGIPVSIVARIPQILSNFKQGHTGQLALITLVLNFAGSIARLFTTMQETG-DPVQVAGFGVAILLNGTLVLQVLLFWGATNKALAQATKKK 269
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: A0A024TCH2_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TCH2_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.560e-25 Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 2
Query: 461 SAYGEIVTIFLQNAILVLLMWRFMKDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERT-AQWSAVQAQK 910
S++GE I +QNAILVLL+W + S + ++ FVA +P ++ LLP +++PL ++A++PQI++N + GHTGQLA +T LNF G++ R+ TT+QE G D +L +S LLNG L QI LYW T A + V+A+K
Sbjct: 99 SSWGESAVILIQNAILVLLLWHYSGAAKSTQFLGVVT--FVALGAGMFYLPSEFNWLLPSASIPLSVMARIPQIMSNFQQGHTGQLAFLTLFLNFGGSAARLFTTLQETG-DQVVLFGFAISMLLNGTLLAQIGLYWSATEAAMAKVKAKK 246
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: A0A662X041_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X041_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.300e-25 Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 2
Query: 461 SAYGEIVTIFLQNAILVLLMWRFMKDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERTAQWSAVQAQKKTA 919
S +GE + I QN +LVLL+W F + ++ GF A IP +Y LL + +P+ IVA++PQI++N K GHTGQLA IT +LN G+ R+ TT+QE G D ++ G++ LLNG L LQ+ L+W T + + QA KK A
Sbjct: 120 STWGENLVILAQNVVLVLLLWAFYVPKIPATSRLGLVLGFAALGAGMFAIPPEYQWLLASAGIPVSIVARIPQILSNFKQGHTGQLAIITLVLNLGGSIARLFTTMQETG-DPVQIAGFGVAILLNGTLVLQVLLFWGATNK-ALAQASKKKA 270
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: A0A485KEC0_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KEC0_9STRA) HSP 1 Score: 114 bits (284), Expect = 5.160e-25 Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = 2
Query: 461 SAYGEIVTIFLQNAILVLLMWRFMKDRPSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERT--AQWSAVQAQKK 913
S +GE +TI +QN ILV ++W + K S + +A FVA +P ++ +LP S++PL ++A++PQI +N K GHTGQLA IT LNF G++ R+ TT+QE G + LL +S LLNG L QI +YW+ T A A A+KK
Sbjct: 99 STWGESLTILIQNIILVAMLWVYSKAPASTQLLG--VATFVALGAGMLHLPSEFDWVLPASSIPLSVMARIPQIFSNFKQGHTGQLAFITLFLNFGGSAARLFTTLQETGDQVVLLGFL-ISMLLNGTLIAQILIYWKATDAALAKAKDAEKK 248
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: G4ZVB4_PHYSP (Mannose-P-dolichol utilization defect 1 protein homolog n=7 Tax=Phytophthora TaxID=4783 RepID=G4ZVB4_PHYSP) HSP 1 Score: 113 bits (282), Expect = 1.520e-24 Identity = 64/152 (42.11%), Postives = 92/152 (60.53%), Query Frame = 2
Query: 461 SAYGEIVTIFLQNAILVLLMWRFMKDR-PSGLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERTAQWSAVQAQKK 913
S +GE + I QN ILVLL+W F + P +++ F A AG IP +Y LL + +P+ IVA+ PQI++N K GHTGQLA IT +LN G+ R+ TT+QE G D ++ G++ +LNG L LQ+ L+W T + A ++KK
Sbjct: 120 STWGENLVILAQNVILVLLLWAFYTPKIPVSTRFGLVVV-FAAMAGGMLSIPDEYQWLLASAGIPVSIVARTPQILSNFKQGHTGQLALITLVLNLAGSIARLFTTLQETG-DPVQVAGFGVTIVLNGTLVLQVLLFWGATNKALAEASKKK 269
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Match: A0A3R7GUL4_9STRA (Mannose-P-dolichol utilization defect 1 protein homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GUL4_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.620e-24 Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 2
Query: 461 SAYGEIVTIFLQNAILVLLMWRFMKDRPS---GLGIAMIIAGFVATAGACAMIPKDYMALLPLSNLPLIIVAKVPQIVANLKNGHTGQLAAITTLLNFVGASVRILTTIQEVGWDLGLLSMHGLSSLLNGALALQIALYWERTAQWSAVQAQKK 913
S +GE + I QN +LVLL+W F + S LG+A++ FVA A IP +Y LL + +P+ IVA++PQI++N K GHTGQLA IT +LN G+ R+ TT+QE G D L+ G++ LLN L LQ+ L+W T + A ++KK
Sbjct: 123 STWGENLVILAQNVLLVLLLWAFYTPKISVSTRLGLAVV---FVAMAVGMFAIPPEYQWLLASAGIPVSIVARIPQILSNFKQGHTGQLAIITLVLNLAGSVARLFTTMQETG-DPVQLAGFGVAILLNSTLVLQVLLFWGATNEALAKASKKK 272 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig142.3025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig142.3025.1 >prot_F-serratus_M_contig142.3025.1 ID=prot_F-serratus_M_contig142.3025.1|Name=mRNA_F-serratus_M_contig142.3025.1|organism=Fucus serratus male|type=polypeptide|length=278bp MNSPSICFLFQNEPFHPKKPGRVTVLWCKCYILRKTETELLMRPHYHALPback to top mRNA from alignment at F-serratus_M_contig142:167212..169694- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig142.3025.1 ID=mRNA_F-serratus_M_contig142.3025.1|Name=mRNA_F-serratus_M_contig142.3025.1|organism=Fucus serratus male|type=mRNA|length=2483bp|location=Sequence derived from alignment at F-serratus_M_contig142:167212..169694- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig142:167212..169694- >mRNA_F-serratus_M_contig142.3025.1 ID=mRNA_F-serratus_M_contig142.3025.1|Name=mRNA_F-serratus_M_contig142.3025.1|organism=Fucus serratus male|type=CDS|length=1668bp|location=Sequence derived from alignment at F-serratus_M_contig142:167212..169694- (Fucus serratus male)back to top |