mRNA_F-serratus_M_contig142.3022.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig142.3022.1
Unique NamemRNA_F-serratus_M_contig142.3022.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: D8LPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT5_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 2.450e-100
Identity = 198/241 (82.16%), Postives = 208/241 (86.31%), Query Frame = 1 
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKRDFGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------RQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGGVVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVRYFSRSRSRSRSPPRRERDR 705
            MSRLYIGNLPMDMKEKDLEDIFYKYGKITD+QLKMPERPPAFGFVTFED RDADEAVRARDGY+FDG+RLRVEMSRGKR+FGGGFG   XX  XXXXXXXXXXXXXXXXX  XXX XXXXXXXXXX           RQTE+R VVTGLP SASWQDLKDHMRKA  GDV YADVDHKGGGVVHF N++ M+YALRKLDGSEFSNRYD+A+I VLPHRDSVR    SRSRSRSPPRRER R
Sbjct:   53 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFGXXXXXXXXXXXXXXXXXXXXXXXXYGXXXGXXXXXXXXXXMGPPRGGFGGGRQTEYRAVVTGLPQSASWQDLKDHMRKA--GDVNYADVDHKGGGVVHFNNKEGMDYALRKLDGSEFSNRYDTATISVLPHRDSVRD---SRSRSRSPPRRERSR 288
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: A0A6H5KN34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN34_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 9.290e-89
Identity = 179/218 (82.11%), Postives = 187/218 (85.78%), Query Frame = 1 
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKRDFGGGFG----------GGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGGVVHFGNRDDMEYALRKLDGSEFSNRYDSASIQV 624
            MSRLYIGNLPMDMKEKDLEDIFYKYGKITD+QLKMPERPPAFGFVTFEDPRDADEAVRARDGY+FDG+RLRVEMSRGKR+FGGGFG          GGG X         XXXXXXXXXXXXXXXXXXXXXXX XXXXXX RQTE+R VVTGLP SASWQDLKDHMRKA  GDV YADVDHKGGGVVHF NR+ M+YALRKLDGSEFSNRYD+A I V
Sbjct:   61 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDPRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFGXXXXXXXXXXGGGGXX--------XXXXXXXXXXXXXXXXXXXXXXXPXXXXXXGRQTEYRAVVTGLPQSASWQDLKDHMRKA--GDVNYADVDHKGGGVVHFNNREGMDYALRKLDGSEFSNRYDTAIISV 268
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: D8LB97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB97_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.710e-76
Identity = 140/236 (59.32%), Postives = 165/236 (69.92%), Query Frame = 1 
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKRD-FGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGGVVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVRYFSRSRSRSRSPPRRERDR 705
            M+R+YIGNLPMD+ EKD++D+FYK+G+I D+ LK P RPPAFGF+TF+D RDA+EAVRARDGY+ DG RLRVE+SRG+RD FG G GG G   G       XXXXXX                         +QTE+R +VTGLP SASWQDLKDHMRKA  G+ TY DVDHKGGG+VHF  RDDM+YALRKLDGS+F N ++ + I VLPHR  V     SRSRSRSP R  R R
Sbjct:    1 MARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDPFGMGGGGHGGRMGMPMGGGRXXXXXXGGAGF--------------------QQTEYRVIVTGLPPSASWQDLKDHMRKA--GEPTYTDVDHKGGGIVHFRTRDDMDYALRKLDGSDFRNPFEKSRISVLPHRG-VGGGRDSRSRSRSPKRSRRAR 213
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: A0A835YQ88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ88_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.780e-68
Identity = 122/212 (57.55%), Postives = 146/212 (68.87%), Query Frame = 1 
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKRDFGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGGVVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHR 636
            M+R+Y+GNLPM+++EKD+ED+FYK+G+I D+ LK P RPPAF FV F+D RDA++AVRARDGYE DG RLRVE++RG R                                    XXXXXXXXX       RQTE+R +VTGLP SASWQDLKDHMRKA  GDV Y DVDH+GGG+VH+  RDDMEYALRKLD SEF N +D + I+VLPHR
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKFGRIRDIDLKTPARPPAFAFVAFDDVRDAEDAVRARDGYEMDGERLRVELARGARG---------------------------------PPXXXXXXXXXGQPMGGGRQTEWRVIVTGLPPSASWQDLKDHMRKA--GDVVYTDVDHRGGGIVHYNTRDDMEYALRKLDDSEFRNPFDHSFIRVLPHR 177
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: A0A836CC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC30_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.950e-67
Identity = 123/226 (54.42%), Postives = 150/226 (66.37%), Query Frame = 1 
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKRDFGGGFGG----------GGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGGVVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVR 648
            M+R+Y+GNLPM+++EKD+ED+FYKYG+I D+ LK P RPP+F FV FED RDA++AV  RDGYE DG RLRVE++RG R+ G  FGG          GG  +G    XXXXX                             RQTE+R +VTGLP SASWQDLKDHMRKA  GDV Y DVDH+GGG+VH+  R DM+YALRKLD SEF N +D + I+VLPHR + R
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKYGRIRDIDLKTPARPPSFAFVAFEDVRDAEDAVSGRDGYEMDGQRLRVELARGARERG--FGGXXXXXFDERGGGRGFGAGRGXXXXXGPPMGGG----------------------RQTEWRVIVTGLPPSASWQDLKDHMRKA--GDVVYTDVDHRGGGIVHYATRSDMDYALRKLDDSEFRNPFDKSYIRVLPHRANAR 200
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: K7VZN2_MAIZE (Serine/arginine-rich-splicing factor SR34 n=3 Tax=Zea mays TaxID=4577 RepID=K7VZN2_MAIZE)

HSP 1 Score: 190 bits (482), Expect = 5.200e-56
Identity = 109/234 (46.58%), Postives = 139/234 (59.40%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKR------DFGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGG---VVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVRYFSRSRSRSRSP 684
            +Y+GNLP D++E+++ED+FYKYGKI D+ LK+P RPP + FV FEDPRDA+EA+  RDGY FDGHRLRVE + G R      D   GFGGGG                                          R +E+R +VTGLP SASWQDLKDHMRKA  GDV +++V  +GGG   +V + N DDM+YA++KLD +EF N +  A I+V  +        RS SRSRSP
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGA-----------------------------------RRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKA--GDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKR---GRSYSRSRSP 202
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: Q64HC3_MAIZE (ASF/SF2-like pre-mRNA splicing factor SRP32 n=10 Tax=Panicoideae TaxID=147369 RepID=Q64HC3_MAIZE)

HSP 1 Score: 190 bits (482), Expect = 5.510e-56
Identity = 109/234 (46.58%), Postives = 139/234 (59.40%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKR------DFGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGG---VVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVRYFSRSRSRSRSP 684
            +Y+GNLP D++E+++ED+FYKYGKI D+ LK+P RPP + FV FEDPRDA+EA+  RDGY FDGHRLRVE + G R      D   GFGGGG                                          R +E+R +VTGLP SASWQDLKDHMRKA  GDV +++V  +GGG   +V + N DDM+YA++KLD +EF N +  A I+V  +        RS SRSRSP
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGA-----------------------------------RRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKA--GDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKR---GRSYSRSRSP 202
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BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: A0A804R7I7_MAIZE (Uncharacterized protein n=6 Tax=Panicoideae TaxID=147369 RepID=A0A804R7I7_MAIZE)

HSP 1 Score: 190 bits (482), Expect = 8.950e-56
Identity = 109/234 (46.58%), Postives = 139/234 (59.40%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKR------DFGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGG---VVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVRYFSRSRSRSRSP 684
            +Y+GNLP D++E+++ED+FYKYGKI D+ LK+P RPP + FV FEDPRDA+EA+  RDGY FDGHRLRVE + G R      D   GFGGGG                                          R +E+R +VTGLP SASWQDLKDHMRKA  GDV +++V  +GGG   +V + N DDM+YA++KLD +EF N +  A I+V  +        RS SRSRSP
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAHGGRGNASSHDRSSGFGGGGGA-----------------------------------RRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKA--GDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKR---GRSYSRSRSP 202
[Close]
BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: A0A2T7CCW0_9POAL (Uncharacterized protein n=5 Tax=Paniceae TaxID=147428 RepID=A0A2T7CCW0_9POAL)

HSP 1 Score: 186 bits (473), Expect = 1.170e-54
Identity = 108/234 (46.15%), Postives = 141/234 (60.26%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKR------DFGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGG---VVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVRYFSRSRSRSRSP 684
            +Y+GNLP D++E+++ED+FYKYG+I D+ LK+P RPP + FV FEDPRDA++A+  RDGY FDGHRLRVE + G R      D  GGFGGG                                           R +E+R +V+GLP SASWQDLKDHMRKA  GDV +++V  +GGG   +V + N DDM+YA++KLD +EF N +  A I+V  + D  R   RS SRSRSP
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDAIAGRDGYNFDGHRLRVEPAHGGRGNASSHDRSGGFGGGARR-------------------------------------GVSRHSEYRVLVSGLPSSASWQDLKDHMRKA--GDVCFSEVYREGGGTIGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEY-DGKR--GRSYSRSRSP 200
[Close]
BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Match: A0A6P5EV55_ANACO (serine/arginine-rich-splicing factor SR34-like isoform X2 n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EV55_ANACO)

HSP 1 Score: 186 bits (472), Expect = 1.470e-54
Identity = 105/226 (46.46%), Postives = 137/226 (60.62%), Query Frame = 1 
Query:   10 LYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDPRDADEAVRARDGYEFDGHRLRVEMSRGKR------DFGGGFGGGGXXYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTEFRTVVTGLPMSASWQDLKDHMRKASAGDVTYADVDHKGGG---VVHFGNRDDMEYALRKLDGSEFSNRYDSASIQVLPHRDSVRYFSR 660
            LY+GNLP D++E+++ED+FYKYG I  + LK+P RPP + FV FEDPRDA++A+R RDGY FDGHRLRVE++ G R      D G G GGGG                                          R++E+R +VTGLP SASWQDLKDHMR+A  GDV +++V  +GGG   +V + N DDM+YA+RKLD SEF N +  A I+V  + D+ R  SR
Sbjct:    9 LYVGNLPGDIREREVEDLFYKYGPIVGIDLKIPPRPPGYAFVEFEDPRDAEDAIRGRDGYNFDGHRLRVELAHGGRSQSSSFDRGSGHGGGGRR------------------------------------GSISRRSEYRVLVTGLPSSASWQDLKDHMRRA--GDVCFSEVFREGGGTIGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYIRVKEY-DAKRSLSR 195
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig142.3022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPT5_ECTSI2.450e-10082.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN34_9PHAE9.290e-8982.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB97_ECTSI1.710e-7659.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQ88_9STRA4.780e-6857.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CC30_9STRA1.950e-6754.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K7VZN2_MAIZE5.200e-5646.58Serine/arginine-rich-splicing factor SR34 n=3 Tax=... [more]
Q64HC3_MAIZE5.510e-5646.58ASF/SF2-like pre-mRNA splicing factor SRP32 n=10 T... [more]
A0A804R7I7_MAIZE8.950e-5646.58Uncharacterized protein n=6 Tax=Panicoideae TaxID=... [more]
A0A2T7CCW0_9POAL1.170e-5446.15Uncharacterized protein n=5 Tax=Paniceae TaxID=147... [more]
A0A6P5EV55_ANACO1.470e-5446.46serine/arginine-rich-splicing factor SR34-like iso... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig142contigF-serratus_M_contig142:64632..69403 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.1
Seed ortholog evalue3.8e-81
Seed eggNOG ortholog2880.D8LPT5
Preferred nameSR30
KEGG koko:K12890
KEGG Pathwayko03040,ko04657,ko05168,map03040,map04657,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0034641,GO:0035061,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.RNA splicing
EggNOG OGsCOG0724@1,KOG0105@2759
Ec32 ortholog descriptionSR RNA splicing protein
Ec32 orthologEc-18_002400.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Exons6
Model size777
Cds size777
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig142.3022.1prot_F-serratus_M_contig142.3022.1Fucus serratus malepolypeptideF-serratus_M_contig142 64632..69403 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929406.204297-CDS-F-serratus_M_contig142:64631..648101622929406.204297-CDS-F-serratus_M_contig142:64631..64810Fucus serratus maleCDSF-serratus_M_contig142 64632..64810 +
1690962837.0504105-CDS-F-serratus_M_contig142:64631..648101690962837.0504105-CDS-F-serratus_M_contig142:64631..64810Fucus serratus maleCDSF-serratus_M_contig142 64632..64810 +
1622929406.2212934-CDS-F-serratus_M_contig142:65398..656101622929406.2212934-CDS-F-serratus_M_contig142:65398..65610Fucus serratus maleCDSF-serratus_M_contig142 65399..65610 +
1690962837.0630667-CDS-F-serratus_M_contig142:65398..656101690962837.0630667-CDS-F-serratus_M_contig142:65398..65610Fucus serratus maleCDSF-serratus_M_contig142 65399..65610 +
1622929406.2326887-CDS-F-serratus_M_contig142:67881..679331622929406.2326887-CDS-F-serratus_M_contig142:67881..67933Fucus serratus maleCDSF-serratus_M_contig142 67882..67933 +
1690962837.0739703-CDS-F-serratus_M_contig142:67881..679331690962837.0739703-CDS-F-serratus_M_contig142:67881..67933Fucus serratus maleCDSF-serratus_M_contig142 67882..67933 +
1622929406.2474308-CDS-F-serratus_M_contig142:68283..683201622929406.2474308-CDS-F-serratus_M_contig142:68283..68320Fucus serratus maleCDSF-serratus_M_contig142 68284..68320 +
1690962837.0824132-CDS-F-serratus_M_contig142:68283..683201690962837.0824132-CDS-F-serratus_M_contig142:68283..68320Fucus serratus maleCDSF-serratus_M_contig142 68284..68320 +
1622929406.264242-CDS-F-serratus_M_contig142:68782..689231622929406.264242-CDS-F-serratus_M_contig142:68782..68923Fucus serratus maleCDSF-serratus_M_contig142 68783..68923 +
1690962837.0946834-CDS-F-serratus_M_contig142:68782..689231690962837.0946834-CDS-F-serratus_M_contig142:68782..68923Fucus serratus maleCDSF-serratus_M_contig142 68783..68923 +
1622929406.2793097-CDS-F-serratus_M_contig142:69247..694031622929406.2793097-CDS-F-serratus_M_contig142:69247..69403Fucus serratus maleCDSF-serratus_M_contig142 69248..69403 +
1690962837.1054645-CDS-F-serratus_M_contig142:69247..694031690962837.1054645-CDS-F-serratus_M_contig142:69247..69403Fucus serratus maleCDSF-serratus_M_contig142 69248..69403 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig142.3022.1

>prot_F-serratus_M_contig142.3022.1 ID=prot_F-serratus_M_contig142.3022.1|Name=mRNA_F-serratus_M_contig142.3022.1|organism=Fucus serratus male|type=polypeptide|length=259bp
MSRLYIGNLPMDMKEKDLEDIFYKYGKITDLQLKMPERPPAFGFVTFEDP
RDADEAVRARDGYEFDGHRLRVEMSRGKRDFGGGFGGGGGGYGGGGGGGY
GGGGGGGYGGGGGYGGGGGHGGGFGGGFGGGRQTEFRTVVTGLPMSASWQ
DLKDHMRKASAGDVTYADVDHKGGGVVHFGNRDDMEYALRKLDGSEFSNR
YDSASIQVLPHRDSVRYFSRSRSRSRSPPRRERDRRRSRSRSPPPRDSYR
GRSRSRSR*
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mRNA from alignment at F-serratus_M_contig142:64632..69403+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig142.3022.1 ID=mRNA_F-serratus_M_contig142.3022.1|Name=mRNA_F-serratus_M_contig142.3022.1|organism=Fucus serratus male|type=mRNA|length=4772bp|location=Sequence derived from alignment at F-serratus_M_contig142:64632..69403+ (Fucus serratus male)
ATGTCTCGCCTATACATCGGAAACCTCCCCATGGACATGAAGGAAAAAGA
CCTCGAGGACATCTTCTACAAGTACGGAAAGATCACCGACCTGCAGCTCA
AGATGCCGGAGCGGCCCCCGGCGTTCGGCTTCGTGACATTCGAGGACCCC
AGAGATGCCGACGAAGCAGTCAGGGCCAGGTCAGACACAAGAGAGGGAAT
GGGGGGGGGGGGGCATGCAGACGCCTGATGGGAGTTTATTTCTAAAGATA
AACCGAGGAAATGAAGCACCTGTGTACTTTGTTTATTCCTGGTCGGCCGA
CCAATGTTTTTGTCCCTATCATACAGCCAATGTTCCCACCTACCAGTAAA
CCTTTTGACTGGATCAAAAGGTTTAGATGCATTCAGATTTTCTTTTAAAA
TACTTGCGGCTGCCATGGTTCCCTCTCTGTACCTTCGGTCCTCTTTCCTA
TCGTCCGCGGTCTACTGTTCCGCTGTGTACACGTGACTGCTTTTGCGGCT
ACGGTATATTTATACCAGTAACATGTTGGTGCGGCGTTATTTATGCGCTG
CAGTCTCTAGCTCTTGATATAAGAAATGTGTAATTTGTACCACAGTACGT
ATTCATCCTCTCCCCTTGTGGTCCCCTACGAATTCAAAACGTTAGGGGCG
TTTGCGCGCACAGGCAGATATTCGTGTGATGTTCACCAGTCTGCCCCGTA
GTTCACTATCTTTGCTTTAGCAGTTAGAATAAACGATCTCCCGTGCGCAT
CGTAACTGTGGCCATAGGGATGGGTACGAGTTCGACGGCCACCGGCTGCG
TGTCGAGATGTCCCGCGGGAAGCGTGATTTCGGGGGCGGTTTCGGCGGCG
GTGGAGGTGGCTATGGCGGTGGGGGCGGAGGCGGCTATGGTGGTGGGGGT
GGGGGTGGTTATGGCGGTGGGGGCGGCTACGGCGGTGGAGGCGGCCACGG
TGGAGGATTCGGCGGAGGGTTCGGCGGTGGTGGCGGCCCGCCTGCCCCGC
GGGGTTTCGGAGGTGGTGAGTAATGCAGACTGACGTCGACCCAAAAGCAA
TGGGCCGTGCTAACTTTTGGATTGTTTGTTTTATGTAAGTTGCAGGCAAA
CACGACGGGACCGTCGTCCGTTGGATCCCCCCCTCCCGCCCCCGCGCGCT
TGAGTTGCGCTTCGTATCATTATCGATTATACCTAGTTTGCGTGTACAAG
CGGCCTCTTGTGGGGTTTTCTAGTCTTCTAGCGCACGATCAACCCCGCTG
CGTCAAGAGCCTCTCCGGCAGGGCGCCGGTCGCAGGTTTTACCGTTGTGC
ATGAGCGAGCTTCTCGTTTTCTCTTCGCCCCCTTCGAATCATGTGGCGTG
GCTCGTTTGCCGCACACGTGTGCTTTCGTTATCGTGGTCGTTCGTTGTTG
GGTGTTTTTTTGTTGTTGTCGCTGCCGCCGCCGTTACCAAATATACCTTT
GAATTCGACCCATCGGAATCTCCTGCACCCCCCCACCCCCCCCCCAACCC
CAACCCCCGCCCACCAACCCGGCGTTGACGGTGGTGGGTCGATATTTCCG
GGTTGGCGAGCGAGCTTATGCTGCACAAACTAAGGCCTTAGGCGGCGGCA
ACCATATTTTCTTGAGTCTGTCCTACATGGTTTCCGAAAAGGGAAGGGGA
GGACAAGTGCGCAGGAAAGCGATCCTTTCCTTGCGACTCATTTACGGCTG
TTACCTGGGGCAGAATGCCAACGGGGTTACTGAAGGCTGTTACGGTTAGG
AGGTGTGCTGGCAGAAAGGGGGGACTGGAGAGCAGGCAGAAAGCAATGCC
TTGTGGGGTGTGAGTGCTATGTTTTAGACTGCGGCTGACTTTGCGGAGAA
AGGTCGAGAGAGCGAAAGCACGCCTGGAGGGGGAAAAGAAGAGAAAATAG
AGGCACAGACGCTCTCACCGTCAATAGAGCGAGACCGGTGGGAACCCTTT
TCTCCCTGTCCCGCTTCTTTTCCTCTTTTTTTCTCTTCTATTTTTAATGT
TTTTGTTTAACCTTCCGCGCTGCGTCAGCTCCGCCCCAGCTCCAGACTTT
AAGCGACCATGTGCTTTTGGAATCCGGGGGTCATAAAAGAAGATGGCTGA
CAGGCTCTTGGCTTGGGGGGGGGGGGGGGGGCATTGGGGGTTCCAGGGGG
AAAGCATGAGCGGAAGCGAGCTTTATTTTTTGGTGGGGTTGCCGTTGGGC
TGATCGGAACGGAACGGCTTCGAAATCGGAATCGGGATCGTGCTTGCAGT
TGGGCTGGTCGGATCAGCAGGGCAGCGGAATCGGGCTTCACTCACCACTT
GGATCTGTGCTGGCTTGGCTATTTCGCTGCTCGCTGACCTGAACCGGCTG
ATGAATCGAGAATGCGGGGAACCATTCATTCCGGGCCTGAACAAACAAAA
ACAAAGGGCGAGACACTTTCACACCACAGAGGGAGACCACCCACTCCTAC
GTACTACCGCTTAGCTAGGATTTGCCGTTATTTGGAGAGAGAGAGAGAGG
ATAGTGTGAAGCAGCCCCGCTATAGCCCGGACTTGGTCGCTTGGTCTCGG
GGAGGAAAGGAAAAGGAAAGGAATGGAAAAAGTGAGAGATGGAGGGGGGG
GGAGGGGGGCAAAAACGATGCGGCTCTACGCTGAGAGGTTTATCGGGAAA
GCGTTTGCCGCTGGGCTAGCACCGCGGCTCTCTTGAGAATTTGGAGTGCC
GGGGTTTCCGTACAGGTGAAGGCGGTATCCCTAGATACCGCGACGTcgcC
CCCCCATCCCCCCCTTTATATCTTCCCGACCAGAACGCAGCTACAGGCGA
CGAAAGAAATCACCGAGGGTTCAGCAGACATTGGTTTTGTGCTTTCCCTG
AACCAGGACACACTCAAACGCTCCAAGTTCGTGTAAGCGTTCACACAAAT
CGACGCGTCTCAGGTCTCGCTTCCGTTTATTTTTTATTTATTTTGAGAAC
CGACGTGTTGTATGTTCTGTTCTTAGCCAGCAGTAATTCCGGCGTCCGGT
TATATCTCTACTCCTTGACTTCGTTGACGTCCATTTTTTTTCATCAACTC
GTTCATTTGAAGACACGAATCTCCTTTTCCCTCTTGCACTGTAGTAAGAG
GTAGCGCGCGACCCCTTTTTGTCTTTCATCTGCCTGAAATATGACTTTTT
TTTTTACCCCCGTTTATCGCCACTTTCTGTCTGTACTATCCCCACACCGG
CGCGTACACTGTACACACATTTTTTTTCATAACCCCCCTCTCTCCCTCAG
GCCGCCAGACCGAGTTTCGAACCGTGGTTACCGGTCTGCCCATGAGTGCA
AGGTGGGTCCGCGAGATTTTTCGCCTTAACTTTGTGTTGTTTTTAATCGC
TGACCGTCATTTCTGGTCTCGACACGCGCGATGGAGACGTTTAGACCAGC
GCACGTATTGCCGTGGGAAGGGAATAGATATGAGACACGTACACGCCTCC
GTACAATTTGAGGCTGTAAGGGGTCGTGGGGGATGACCGGTGTGTGTGGT
TTTACGATGAAGCCAGCACGTTCTCTTCCTTGGTCGTTTCTGTACGTTGG
GCAAGCACGATTAGAGAGAAGCCTGTCCATGCAATCCACACCCTCCCTTT
CCCACGCTGGCTCTTTCGGTGCCCCCGGATCTTGACCGTCGGCGTCCTGC
AGCTGGCAAGATCTGAAGGATCACATGCGGAAGGCGAGTGTTTCTTTGGG
TTATCCTTACTCAGTTTGGATACGGCAGTCTTGTTTATCCGTACATCTAC
GACTATCTTTAGCCTACCTCTCTATTAATAGGCTTTTCTTCATTTTCCCG
AGTGCTACGGAGATAGCGTCGGCTTCGTCCATGTAGCCAACCGAAATACA
CGGCCTTGAGGCTTGTGTCGAGTCCACGACGTGTGTCGAGCCGTGTGTGT
CGTCGCCGCTTTGCTCAAGTCGCTCAACGAGCGAACGTGACGCGAGCGTT
GTTCCTCTTGATTCGCCTAAGACGGCCTTGACTTGACGGGGGAAATCCAA
GACGCCCCCGTCCCCGTCCGAATTTATGCACCATGCTTGGAAAACCTTGC
CAGCGTCTTATTGTTATAATAGTAGACATTATACGCGTGTCTCCCTTCTC
TCTCTGTTGCTGTGTCGCTCTCCTCACTCTCCTCACTCTCCTCACTCTCA
GGCGGGTGATGTCACGTACGCCGACGTGGACCACAAAGGCGGAGGTGTGG
TGCACTTCGGCAACAGGGATGACATGGAGTACGCTCTCCGCAAGCTAGAC
GGATCCGAGTTCTCAAACCGTTACGATAGTGCATCAATCCAGGTGGGGGC
TGTCGGCGATTGGAAATCAAGGGAATGGGGGGGAGGGGGAGTTACGGAGT
ATAGGGCGTTACGCCAGGTGCACACTTCTAATTAAAATACCATACTCGCT
CCATGTTTTTCGGTCGTCTTTAGAAAAGACTGTTAATGATTTTTTTTCAT
CATGCTTTGCTGCCGCCTTGAAAAAAAAACAAGGAACAAGGCTGAGAACC
AGGTCATATTATCCGTACAGGAAGTACGGTTCGCATGAACGAACAACAGC
GCCACCCCCCTAAAGCCTAACATAACCCGCTTCGCGCGAATGTACGCACC
TGCACTCTTGACACAGGTCCTGCCCCACCGAGACAGTGTGCGCTACTTCA
GCCGCAGCCGATCCAGGAGCCGCTCTCCTCCCCGGCGGGAACGTGATCGC
CGTAGGTCGAGGTCGCGGTCCCCTCCCCCCCGTGACTCCTACCGCGGCAG
GTCTAGGTCTCGCTCCCGGTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig142:64632..69403+

>mRNA_F-serratus_M_contig142.3022.1 ID=mRNA_F-serratus_M_contig142.3022.1|Name=mRNA_F-serratus_M_contig142.3022.1|organism=Fucus serratus male|type=CDS|length=1554bp|location=Sequence derived from alignment at F-serratus_M_contig142:64632..69403+ (Fucus serratus male)
ATGTCTCGCCTATACATCGGAAACCTCCCCATGGACATGAAGGAAAAAGA
CCTCGAGGACATCTTCTACAAGTACGGAAAGATCACCGACCTGCAGCTCA
AGATGCCGGAGCGGCCCCCGGCGTTCGGCTTCGTGACATTCGAGGACCCC
AGAGATGCCGACGAAGCAGTCAGGGCCAGATGTCTCGCCTATACATCGGA
AACCTCCCCATGGACATGAAGGAAAAAGACCTCGAGGACATCTTCTACAA
GTACGGAAAGATCACCGACCTGCAGCTCAAGATGCCGGAGCGGCCCCCGG
CGTTCGGCTTCGTGACATTCGAGGACCCCAGAGATGCCGACGAAGCAGTC
AGGGCCAGGGATGGGTACGAGTTCGACGGCCACCGGCTGCGTGTCGAGAT
GTCCCGCGGGAAGCGTGATTTCGGGGGCGGTTTCGGCGGCGGTGGAGGTG
GCTATGGCGGTGGGGGCGGAGGCGGCTATGGTGGTGGGGGTGGGGGTGGT
TATGGCGGTGGGGGCGGCTACGGCGGTGGAGGCGGCCACGGTGGAGGATT
CGGCGGAGGGTTCGGCGGTGGGATGGGTACGAGTTCGACGGCCACCGGCT
GCGTGTCGAGATGTCCCGCGGGAAGCGTGATTTCGGGGGCGGTTTCGGCG
GCGGTGGAGGTGGCTATGGCGGTGGGGGCGGAGGCGGCTATGGTGGTGGG
GGTGGGGGTGGTTATGGCGGTGGGGGCGGCTACGGCGGTGGAGGCGGCCA
CGGTGGAGGATTCGGCGGAGGGTTCGGCGGTGGCCGCCAGACCGAGTTTC
GAACCGTGGTTACCGGTCTGCCCATGAGTGCAAGGCCGCCAGACCGAGTT
TCGAACCGTGGTTACCGGTCTGCCCATGAGTGCAAGCTGGCAAGATCTGA
AGGATCACATGCGGAAGGCGAGTCTGGCAAGATCTGAAGGATCACATGCG
GAAGGCGAGTGCGGGTGATGTCACGTACGCCGACGTGGACCACAAAGGCG
GAGGTGTGGTGCACTTCGGCAACAGGGATGACATGGAGTACGCTCTCCGC
AAGCTAGACGGATCCGAGTTCTCAAACCGTTACGATAGTGCATCAATCCA
GGCGGGTGATGTCACGTACGCCGACGTGGACCACAAAGGCGGAGGTGTGG
TGCACTTCGGCAACAGGGATGACATGGAGTACGCTCTCCGCAAGCTAGAC
GGATCCGAGTTCTCAAACCGTTACGATAGTGCATCAATCCAGGTCCTGCC
CCACCGAGACAGTGTGCGCTACTTCAGCCGCAGCCGATCCAGGAGCCGCT
CTCCTCCCCGGCGGGAACGTGATCGCCGTAGGTCGAGGTCGCGGTCCCCT
CCCCCCCGTGACTCCTACCGCGGCAGGTCTAGGTCTCGCTCCCGGTGAGT
CCTGCCCCACCGAGACAGTGTGCGCTACTTCAGCCGCAGCCGATCCAGGA
GCCGCTCTCCTCCCCGGCGGGAACGTGATCGCCGTAGGTCGAGGTCGCGG
TCCCCTCCCCCCCGTGACTCCTACCGCGGCAGGTCTAGGTCTCGCTCCCG
GTGA
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