mRNA_F-serratus_M_contig1418.3018.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE) HSP 1 Score: 211 bits (538), Expect = 8.510e-59 Identity = 130/387 (33.59%), Postives = 204/387 (52.71%), Query Frame = 1
Query: 202 PKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDDKATV------------------DRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLSKADEPQ-----------HPE-----EKEEMKMFPYREAVGALMMQEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPL 1260
P+ + + K + K +GK+ K+K RL A+GF ++ V Y SP PS+ASI+++LA A K L H+D +Q + A +DEEI++++P + +G+ +AIYGL Q+GR W D + G EQ KADPCVFRK+VD+ + + A L++KF K++G+ E++ C I R+ + LK Q Y+++MVKRFDV+ ++I A+ G+ K D+ + H E E++E +G + + + ++EAE +A E VK+ LF+R V F+ P ++ V ED +GAI L N + RTKHIDV+ H R + + V +V + +QH DL+TK L
Sbjct: 201 PEGRRPVSPKWCFSWKTNNEGKIHKFKARLVARGFSKIPNVDYFHSSSPCPSSASIKLMLAVANEKGMN-LNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVAESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVXALGCHTEDPRLPERDEGPRHHLPTGIGVRACRSIVSLSSTEAECIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDKQGAIALVQNPLSPGRTKHIDVRFHFIRGLFRSGDISVKFVPTTEQHTDLVTKAL 586
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE) HSP 1 Score: 214 bits (545), Expect = 3.460e-58 Identity = 144/439 (32.80%), Postives = 229/439 (52.16%), Query Frame = 1
Query: 34 ACDDGGQMAMQATLDV-PEPRNRRQAMESHQWDEWRKAEDTEMLGMVENCVYNQVAR-PKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDD------------------KATVDRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLSKADEPQHPEEKEEMKMFPYREAVGALMM-----QEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPLDVKTF 1275
A D ++ + DV PEP + ++A+ + W KA E+ G++ + A+ P+ VI + ++K K + GK+ K K RL A+GF Q GV Y E +SPT +AASIR+++A A K + EL H D EQ F+++ +D E+++K+P G + RLNK+ YGL QA R + + D+ IG EQ+ +DPCV R ++ D K + L +++G+ ++GC +R+R+ ++ Q Y+ S+ + D A + +PT+ A G L+ Q+ + TSEAEY+A+ + VK+ LF+ + +F+ PS + +DVFEDNEGAI LA N +S R+KHIDV+HH R+ ++ + V +V S++QHAD+LTK L F
Sbjct: 127 AARDAVELPKELIQDVKPEPGSYQEALRAKHATIWDKAMCAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALAC-KYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSWYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTRNLGEVRLFLGCAFSRDREAGTIEISQEGYIRSVFR--DSIFVAPARSPLPLPTI----------------------AAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 540
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 201 bits (512), Expect = 3.570e-53 Identity = 142/486 (29.22%), Postives = 220/486 (45.27%), Query Frame = 1
Query: 133 WRKAEDTEMLGMVENCVYNQV-ARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDDKATV------------------DRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLSKADEPQHPEEKEEMKMFPYREAVGALMM-------------------------------------------------------------------------------------------QEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPL 1260
W +A E G + ++ V P+ + + +K + K ++GK++ +K RL A+GF Q+ V Y SP PS+ASI+++LA A K L H+D +Q + A +DEE+++K+P + + + +AIYGL Q+GR W D + G EQ KADPCVFRK+VD+ + + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++I A G K ++ EE +P REA+G++M Q + + ++EAEY+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H R + + V +V + +QHADLLTK L
Sbjct: 752 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMN-LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 201 bits (512), Expect = 3.930e-53 Identity = 142/486 (29.22%), Postives = 220/486 (45.27%), Query Frame = 1
Query: 133 WRKAEDTEMLGMVENCVYNQV-ARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDDKATV------------------DRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLSKADEPQHPEEKEEMKMFPYREAVGALMM-------------------------------------------------------------------------------------------QEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPL 1260
W +A E G + ++ V P+ + + +K + K ++GK++ +K RL A+GF Q+ V Y SP PS+ASI+++LA A K L H+D +Q + A +DEE+++K+P + + + +AIYGL Q+GR W D + G EQ KADPCVFRK+VD+ + + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++I A G K ++ EE +P REA+G++M Q + + ++EAEY+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H R + + V +V + +QHADLLTK L
Sbjct: 1131 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMN-LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 201 bits (512), Expect = 4.030e-53 Identity = 142/486 (29.22%), Postives = 220/486 (45.27%), Query Frame = 1
Query: 133 WRKAEDTEMLGMVENCVYNQV-ARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDDKATV------------------DRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLSKADEPQHPEEKEEMKMFPYREAVGALMM-------------------------------------------------------------------------------------------QEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPL 1260
W +A E G + ++ V P+ + + +K + K ++GK++ +K RL A+GF Q+ V Y SP PS+ASI+++LA A K L H+D +Q + A +DEE+++K+P + + + +AIYGL Q+GR W D + G EQ KADPCVFRK+VD+ + + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++I A G K ++ EE +P REA+G++M Q + + ++EAEY+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H R + + V +V + +QHADLLTK L
Sbjct: 1294 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMN-LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1771
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 201 bits (510), Expect = 7.320e-53 Identity = 142/486 (29.22%), Postives = 219/486 (45.06%), Query Frame = 1
Query: 133 WRKAEDTEMLGMVENCVYNQV-ARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDDKATV------------------DRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLSKADEPQHPEEKEEMKMFPYREAVGALMM-------------------------------------------------------------------------------------------QEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPL 1260
W +A E G + ++ V P+ + + +K + K ++GK++ +K RL A+GF Q+ V Y SP PS+ASI+++LA A K L H+D +Q + A +DEE+++K+P + + + +AIYGL Q+GR W D + G EQ KADPCVFRK+VD + + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++I A G K ++ EE +P REA+G++M Q + + ++EAEY+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H R + + V +V + +QHADLLTK L
Sbjct: 1151 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMN-LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.250e-51 Identity = 155/536 (28.92%), Postives = 244/536 (45.52%), Query Frame = 1
Query: 25 DVLACDDGGQMAMQATLDVPEPRNRRQAMESHQWDEWRKAEDTEMLGMVENCVYNQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEF---------PGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRK-----------VVDD-------KATVDRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMP--TLSKADEPQHPEEKEEMKMFPYREAVGALM--------------------------------------------------------------------------------------------MQEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPLDVK 1269
D L +GGQ+ M AT +VP + +A H DEW+KA +E+ ++ N + V +P + IG + ++ K + G+V +YK RL A+G+ Q G+ Y E YSP S+R +LA ++ E+ D + FL +++EEIY+++PE +E V L +++YGL QA R WN + + G E A ADPCV+ + VDD KA + A + +KF++KD+G A + +G I + + R L Q Y ES++K+F ++ AK P L+KADEPQ E+K +MK PYR VG+LM Q+ A ++EAEY+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N RTKHID+++H R+ + V + YV +++Q A +TK L K
Sbjct: 48 DELLAIEGGQL-MAATEEVP--KTYAEATTRHDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEG-MEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRGEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLAYFMTKGLSSK 577
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A438FEW0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FEW0_VITVI) HSP 1 Score: 194 bits (492), Expect = 1.590e-50 Identity = 154/513 (30.02%), Postives = 235/513 (45.81%), Query Frame = 1
Query: 85 EPRNRRQAMESHQWDEWRKAEDTEMLGMVENCVYNQVARPKDKLVIGTKMLYKRKIGQDG-KVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEF--PGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDD------------------KATVDRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMP-TLSKADEPQHPEEKEEMKMFPYREAVGALM----------------------------------------------------------------------------------------------MQEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPLDVKTF 1275
EP+ ++A+ S++ D+W KA EM + +N + V +PKD+ V+G+K ++KRK G G + +YK RL A+GF Q EGV Y E +SP +SIR+LLA A +D EL D + FL ++DE IY++ PE F E G V L K++YGL Q+ R W +F M IG + D CV+ K+ +D K +++ L+ +F++KD+G A+ +G I R+R R L+ Q+ Y+ ++ RF++ + G LS P+ EEK M+ PY VG++M +Q V A T+EAEY+A++E VK+ ++L+ + E E +M G V V+ DN+ AI LA N+ R+KHIDV+ H RD A + V V ++D +D+LTK L+V F
Sbjct: 734 EPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKHSSIRLLLAFVAHED-LELDQLDVKTAFLHGELDELIYMQPPEGFGEGIKDGQVCLLKKSLYGLKQSPRQWYKRFDKYMLDIGFNPSSHDGCVYFKLTEDSMVYLLLYVDDMLVACKEKRHLEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQNSYISKVLSRFEMNNVKTVSTPLGQHFRLSITQAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTVFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITE--ELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKF 1243
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE) HSP 1 Score: 191 bits (486), Expect = 1.790e-50 Identity = 131/394 (33.25%), Postives = 192/394 (48.73%), Query Frame = 1
Query: 262 GKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKV------------VDD------KATVDRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLS-KADEPQHPEEKEEMKMFPYREAVGALMM-------------------------------------QEVTAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHLGRDASDAQRVRVAYVRSEDQHADLLTKPLDVKTF 1275
G + K RL A+GF Q EGV + E +SP PS SIR+L A A D +L HFDAEQ F+++++DE ++I++P G V RL +++YGL QA R W++ M ++G E AD CV R + VDD K+ D+F EL + + ++G+ +Y GCH R+ + Q E +V +F V + + G+ ADEP E P+R VG LM Q+ ++EAEYVA+S+ +K+ +FLR + +F+ P VG V+EDN GAI LA+N + +KHID++HH R+ +V +VRS+ Q D LTKPL +TF
Sbjct: 361 GYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLD-WDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVELNRYMPISNLGELRWYAGCHFPRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDE--------PFRSLVGYLMWLANQIRPDILNAATDRRSVSWALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRPDFLTKPLPKETF 745
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 1.930e-47 Identity = 124/395 (31.39%), Postives = 190/395 (48.10%), Query Frame = 1
Query: 202 PKDKLVIGTKMLYKRKIGQDGKVEKYKCRLAAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAASKDDGELRHFDAEQEFLKADIDEEIYIKVPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGSEQAKADPCVFRKVVDDKATV------------------DRFAAELEQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKILAASGMPTLSKADEPQHPEEKEEMKMFPYREAVGALM-------------------------------MQEV----------------------TAAGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVDVFEDNEGAIRLATNKHASRRTKHIDVKHHL 1173
P+ + + +K + K ++GK++ +K RL A+GF Q+ V Y S PS+AS +++LA A K H D +Q + A +DEE+++K P E + + +AIYGL Q+GR W D + G EQ KADPCVFRK+VD+ + + A L +KF +++G+ E++ GC I R+ + LK Q Y++SMVKRFDV+ ++I A+ G+ K D E +P REA+G++M +Q++ A ++EAEY+A E VK+ LF+R V F+ P ++ V ED++GAI L N +S RTKHIDV+ H
Sbjct: 506 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFPQIPNVDYFHSSSACPSSASNKLMLAVANEKGVN-FNHSDVKQAYTHATLDEEVFLKRPAGCGEKLRKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDNENGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLSITYQRGSGLGLAVASSTEAEYIAAGEGVKEALFVRAVLLFVAPETSGSSIQVLEDSQGAIALVQNPLSSGRTKHIDVRFHF 892 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1418.3018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1418.3018.1 >prot_F-serratus_M_contig1418.3018.1 ID=prot_F-serratus_M_contig1418.3018.1|Name=mRNA_F-serratus_M_contig1418.3018.1|organism=Fucus serratus male|type=polypeptide|length=425bp AEEENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHQWDEWRKAEDback to top mRNA from alignment at F-serratus_M_contig1418:137614..139224- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1418.3018.1 ID=mRNA_F-serratus_M_contig1418.3018.1|Name=mRNA_F-serratus_M_contig1418.3018.1|organism=Fucus serratus male|type=mRNA|length=1611bp|location=Sequence derived from alignment at F-serratus_M_contig1418:137614..139224- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1418:137614..139224- >mRNA_F-serratus_M_contig1418.3018.1 ID=mRNA_F-serratus_M_contig1418.3018.1|Name=mRNA_F-serratus_M_contig1418.3018.1|organism=Fucus serratus male|type=CDS|length=2550bp|location=Sequence derived from alignment at F-serratus_M_contig1418:137614..139224- (Fucus serratus male)back to top |