mRNA_F-serratus_M_contig1411.2983.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: D8LE51_ECTSI (SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE51_ECTSI) HSP 1 Score: 219 bits (557), Expect = 1.180e-62 Identity = 115/155 (74.19%), Postives = 124/155 (80.00%), Query Frame = 1
Query: 79 KVGKGIIGCSDMGFGGREDCPPILTFDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLLRCASTVTEFSHGQTFHCLKRFAPYLFHNVLEGRLRRGG 543
K+ K G GRE IL FDAV+MDEAAQAVEPSS+IPLK++PRAVIMVGDPAQLPATIFS+ A+ ANY QSLFLRLQRGGHP+ MLDTQYRMHP IASFAS RFY GLLR A TVTE SHGQ FH L RFAPYLFHNV GRL+RGG
Sbjct: 750 KLSKTKKGQKKAKAAGREG-QTILGFDAVVMDEAAQAVEPSSMIPLKYNPRAVIMVGDPAQLPATIFSKDAQRANYAQSLFLRLQRGGHPKTMLDTQYRMHPDIASFASTRFYSGLLRSAPTVTEASHGQVFHRLPRFAPYLFHNVSGGRLKRGG 903
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: A0A6H5JS06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS06_9PHAE) HSP 1 Score: 205 bits (521), Expect = 8.300e-58 Identity = 110/155 (70.97%), Postives = 119/155 (76.77%), Query Frame = 1
Query: 79 KVGKGIIGCSDMGFGGREDCPPILTFDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLLRCASTVTEFSHGQTFHCLKRFAPYLFHNVLEGRLRRGG 543
K KG G GG+ IL FDAV+M AVEPSS+IPLK++PRAVIMVGDPAQLPATIFS+ A+ ANY QSLFLRLQRGGHP+ MLDTQYRMHP IASFAS RFY GLLR A TVTE SHGQ FH L RFAPYLFHNV GRL+RGG
Sbjct: 949 KTKKGRKKAKAAGHGGQA----ILGFDAVVM-----AVEPSSMIPLKYNPRAVIMVGDPAQLPATIFSKDAQRANYAQSLFLRLQRGGHPKTMLDTQYRMHPDIASFASTRFYSGLLRSAPTVTEASHGQVFHRLPRFAPYLFHNVSGGRLKRGG 1094
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: A0A482SHI2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHI2_9ARCH) HSP 1 Score: 144 bits (364), Expect = 7.640e-38 Identity = 81/159 (50.94%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 94 IIGCSDMGFGGREDCPPIL-----TFDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLL----RCASTVTEFSHGQTFHCLKRFAPYLFHNVLEGRLRRGG 543
I+ C+ G G + +L TFD V++DEAAQAVEPSSLIP K++P+ V+MVGDP QLPAT+FS+ K+ANY QSLF RLQR G P ML+TQYRMHP+IA F S R+Y L A+TV S G + F P +FH+V+ GR + G
Sbjct: 67 IVACTLSGAGSQPILEVVLRISGFTFDCVVIDEAAQAVEPSSLIPFKYNPQLVVMVGDPCQLPATVFSRLCKEANYSQSLFQRLQRSGVPVAMLETQYRMHPAIAEFPSMRYYNNFLVTDPHVAATVPN-SKGYYQDKSELFRPIVFHDVMYGREKLEG 224
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: A0A7S3MCA3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCA3_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.940e-36 Identity = 74/124 (59.68%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 154 FDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQG-LLRCASTVTEFSHGQTFHC--LKRFAPYLFHNV 516
FDAVI+DEAAQAVEPSSLIP K++P+AV++VGDP QLPAT+FS AK A Y QSLF RLQ G+P +ML+TQYRMHP+IA + S R+YQ L+ + +T SH +H +F P+LFHNV
Sbjct: 807 FDAVIIDEAAQAVEPSSLIPFKYNPQAVVLVGDPCQLPATVFSATAKKAGYSQSLFQRLQIAGYPVLMLETQYRMHPAIAEYPSLRYYQSRLITGSQLITSDSHKMPYHNDPSGKFRPFLFHNV 930
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: A0A7S3C4A0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C4A0_9EUKA) HSP 1 Score: 131 bits (329), Expect = 4.450e-35 Identity = 70/125 (56.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 154 FDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLLRCASTVTEFSHGQTFHCLKRFAPYLFHNVLEGR 528
FD V++DEAAQAVE S+LIPLK+ R +I++GDP QLPAT+FSQ A NY QSLF RLQ+GG ML TQYRMHP I+ F + RFYQG L A + E S +H FAPY+ +NV +G+
Sbjct: 18 FDTVLIDEAAQAVEASTLIPLKYGCRRLILIGDPEQLPATVFSQVATQHNYEQSLFHRLQQGGQRVTMLTTQYRMHPYISKFPAHRFYQGALHDAPGL-EVSRACEWHKFHAFAPYVVYNVEDGK 141
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: A0A7S0SVB8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVB8_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.410e-33 Identity = 73/152 (48.03%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 94 IIGCSDMGFGGREDCPPIL-----TFDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLLRCASTVTEFSHGQT---FHCLKRFAPYLFHNVLEG 525
I+ C+ G G + ++ FDA+I+DEAAQ+ EPS+LIP KF P VIMVGDP QLPA I S+K+K+ NY QSLF RLQ+ G ML+TQYRMHP IA ++S RFY L ++ E + FH ++F P++FHNV++G
Sbjct: 371 IVCCTLSGAGSQALIEVVIGKTGFKFDAIIIDEAAQSTEPSALIPFKFDPHLVIMVGDPCQLPAVILSKKSKECNYHQSLFERLQKSGVEMTMLNTQYRMHPYIADYSSFRFYNNQLLTDISLLENAERVRPYYFHPSEKFKPFVFHNVIKG 522
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: A0A8J2WTU9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTU9_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.870e-32 Identity = 74/153 (48.37%), Postives = 92/153 (60.13%), Query Frame = 1
Query: 94 IIGCSDMGFG-GREDCPPILTFDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLLRCASTVTEFSHG--QTFHCLKRF--APYLFHNVLEGRLRR 537
+ GC+ ++ P FDAV++DEAAQAVEPS+ IPL++ P+ V++VGDPAQL AT+ S + A YGQSLF RL RGGHP +L TQYRM + S+RFY GLL A VT SH L R AP FH+V G RR
Sbjct: 397 LSGCAHSSLAEAQQSIAPEPLFDAVVVDEAAQAVEPSTYIPLRYGPKRVVLVGDPAQLAATLLSPATERAGYGQSLFERLWRGGHPTSLLRTQYRMQRDLCDLVSRRFYSGLLTSADRVTSQSHSLPPALTALGRTHSAPLAFHDVTSGESRR 549
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: A0A7R9UGG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG7_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.530e-30 Identity = 63/105 (60.00%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 112 MGFGGREDCPPI--LTFDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPR-MMLDTQYRMHPSIASFASKRFY 417
+G GGR D + TFDAV++DEAAQAVE S+LIPL+++P+AV++VGDPAQLPAT+ S++A+ G SLF RLQ GG PR LDTQYRMHP IA S FY
Sbjct: 20 LGEGGRRDEKMLQAFTFDAVVVDEAAQAVETSTLIPLRYNPQAVVLVGDPAQLPATVLSREAQAGGLGGSLFERLQEGGFPRCFFLDTQYRMHPKIARIVSSMFY 124
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: MAA3_ARATH (Probable helicase MAGATAMA 3 n=17 Tax=Brassicaceae TaxID=3700 RepID=MAA3_ARATH) HSP 1 Score: 126 bits (316), Expect = 2.710e-30 Identity = 65/125 (52.00%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 154 FDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLLRCASTVTEFSHGQTFHCLKRFAPYLFHNVLEGR 528
FD VI+DEAAQAVEP++LIPL + V +VGDP QLPAT+ S A+D+ YG S+F RLQ+ G+P ML TQYRMHP I SF SK+FY+G L S + E + +H + F P+ F ++ EG+
Sbjct: 484 FDVVIIDEAAQAVEPATLIPLATRCKQVFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDGSDI-EAQTTRDWHKYRCFGPFCFFDIHEGK 607
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Match: UPI00053C967E (probable helicase MAGATAMA 3 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C967E) HSP 1 Score: 125 bits (315), Expect = 3.710e-30 Identity = 66/125 (52.80%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 154 FDAVIMDEAAQAVEPSSLIPLKFSPRAVIMVGDPAQLPATIFSQKAKDANYGQSLFLRLQRGGHPRMMLDTQYRMHPSIASFASKRFYQGLLRCASTVTEFSHGQTFHCLKRFAPYLFHNVLEGR 528
FD VI+DEAAQAVEP++L+PL + V +VGDP QLPAT+ S AK+ YG SLF RLQR GHP ML TQYRMHP I SF SK FY L S + E + +H + F P+ F ++ EG+
Sbjct: 492 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPIAKEFGYGTSLFKRLQRAGHPVKMLRTQYRMHPEIRSFPSKEFYDEALEDGSDI-EAQTNREWHKYRCFGPFCFFDIHEGK 615 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1411.2983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1411.2983.1 >prot_F-serratus_M_contig1411.2983.1 ID=prot_F-serratus_M_contig1411.2983.1|Name=mRNA_F-serratus_M_contig1411.2983.1|organism=Fucus serratus male|type=polypeptide|length=182bp MSEKHKQKHEKHDWKAHKKQKYAPKRKVGKGIIGCSDMGFGGREDCPPILback to top mRNA from alignment at F-serratus_M_contig1411:149046..150346+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1411.2983.1 ID=mRNA_F-serratus_M_contig1411.2983.1|Name=mRNA_F-serratus_M_contig1411.2983.1|organism=Fucus serratus male|type=mRNA|length=1301bp|location=Sequence derived from alignment at F-serratus_M_contig1411:149046..150346+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1411:149046..150346+ >mRNA_F-serratus_M_contig1411.2983.1 ID=mRNA_F-serratus_M_contig1411.2983.1|Name=mRNA_F-serratus_M_contig1411.2983.1|organism=Fucus serratus male|type=CDS|length=1092bp|location=Sequence derived from alignment at F-serratus_M_contig1411:149046..150346+ (Fucus serratus male)back to top |