mRNA_F-serratus_M_contig141.2962.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 257 bits (656), Expect = 6.350e-74 Identity = 134/243 (55.14%), Postives = 172/243 (70.78%), Query Frame = 1
Query: 88 EVRAVAAANYSDGVSAVSGT-DRPSAREVTTEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGF--VDVWCPEGSASEDIEFFRSQA---DESGVIN-----PLNLATSYLDLDFMYGRSVEEAEALRTME-NGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILDY 780
E+R+VA A+Y+D + G RP+AREV T+VFLA+ S SALFVAW L+ YDL L DN + F I C+DGNG +D+WCP G++S+ I FFRS A D+ G + P+N AT+++DLDF+YGRS E+A LR+ + NG+M +TE G+P NDDGTWLI DQRTA PVTFALH++LLREHN CC IA G E DEDIYQVCRGWTIA+F+HIT +DF++RL G + D+
Sbjct: 60 ELRSVAQADYADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWGQLLTYDLSLTVDNSSEPFDIACNDGNGAEGIDIWCPLGASSDPISFFRSDAGLSDDDGANSVETRSPVNYATAFMDLDFVYGRSEEDAATLRSSDGNGFMAVTEKGLPYLNDDGTWLIADQRTARFPVTFALHVVLLREHNRCCVEIAPGEGAETDEDIYQVCRGWTIAVFQHITENDFLIRLLGGSVSDF 302
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI) HSP 1 Score: 244 bits (622), Expect = 2.520e-72 Identity = 128/243 (52.67%), Postives = 168/243 (69.14%), Query Frame = 1
Query: 88 EVRAVAAANYSDGVSAVSGT-DRPSAREVTTEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGF--VDVWCPEGSASEDIEFFRSQA---DESGVI-----NPLNLATSYLDLDFMYGRSVEEAEALRTMENG--YMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILD 777
++R+VA A Y+D G RP+AREV T+VFL + S SALF+ W L+ +DL L +DN + I C+DG G VDVWCP G+ S+ I F+RS A D+ G + +P+N AT+++DLDF+YGRS +EA ALR+ +G +M LTE+G+P NDDGTWLI DQR+A PVTFALH++LL EHN CC IA S G+EGDEDIYQ CRGWTIA+F+H+T +DF++RL G I D
Sbjct: 136 QLRSVAGAYYADADFTPPGDLTRPTAREVMTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIECNDGTGAGGVDVWCPLGAESDPIPFYRSDAALSDDDGALGEETRSPVNYATAFVDLDFVYGRSEDEAAALRSSADGDGFMALTENGLPYVNDDGTWLIADQRSAQFPVTFALHVMLLLEHNRCCMDIAPSEGFEGDEDIYQACRGWTIAVFQHVTENDFLIRLLGGNIQD 378
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 238 bits (607), Expect = 1.640e-67 Identity = 112/204 (54.90%), Postives = 146/204 (71.57%), Query Frame = 1
Query: 175 TEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGFVDVWCPEGSASEDIEFFRSQADES-GVINPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILDYS 783
T+VFL++ S + +F+AW L+ DL DN + F I CDDG G VDVWCP G AS+ I FFRS+A + V NP+N A+S++DLDF+YGRS + A+ALRT E G +++ +D MP++N+DGTWLI DQRTA P+TFALHI+LL EHN CC +A L Y GDEDIYQ CRGWTIA F+HIT D+F++ L G I D++
Sbjct: 3 TDVFLSSPPKVSEMNTVFIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVTDSVRNPINYASSFIDLDFLYGRSEDAADALRTFEGGMLSMADDNMPIKNNDGTWLIADQRTARFPLTFALHIVLLLEHNRCCVDVAPGLNYTGDEDIYQACRGWTIATFQHITEDEFLILLMGRSIGDWT 206
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 238 bits (606), Expect = 3.090e-67 Identity = 115/221 (52.04%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 142 GTDRPSAREVTTEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGFVDVWCPEGSASEDIEFFRSQADES-GVINPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILDYSPIVVDD 801
G R RE+ T+VFL++ S +A+ +AW L+ DL DN + F I CDDG G VDVWCP G AS+ I FFRSQA + V NP+N A+S++DLDF+YGRS + A+ALRT + G +++ +D MP++N DGTWLI DQRTA P+TFALH++LL EHN CC +A +L Y DED+YQ CRGWTIA F+HIT D+F++ L G I D++ DD
Sbjct: 7 GALRGQPRELMTDVFLSSPPSVSDMNAVSIAWGQLLLLDLSYTVDNSSEPFEIACDDGGGSVDVWCPLGEASDPIPFFRSQATVTDSVRNPINYASSFIDLDFVYGRSKDAADALRTFDGGMLSMADDNMPIKNSDGTWLIADQRTARFPLTFALHVVLLLEHNRCCVDVAPALNYTSDEDMYQACRGWTIATFQHITEDEFLILLMGRSIGDWTVYQDDD 227
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 236 bits (602), Expect = 1.060e-66 Identity = 112/208 (53.85%), Postives = 148/208 (71.15%), Query Frame = 1
Query: 163 REVTTEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGFVDVWCPEGSASEDIEFFRSQADES-GVINPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILDYS 783
RE+ T+VFL++ S +A+ +AW L+ DL DN + F I CDDG G VDVWCP G AS+ I FFRS+A + V NP+N A+S++DLDF+YGRS + A+ALRT E+G +++ +D MP++NDDGTWLI DQRTA P+TFALH++LL EHN CC +A Y GDEDIYQ CRGWTIA F+HIT D+ ++ L G I D++
Sbjct: 14 RELMTDVFLSSPPSVSDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPIPFFRSEATVTDSVRNPINYASSFIDLDFVYGRSEDAADALRTFEDGMLSMADDNMPIKNDDGTWLIADQRTARFPLTFALHVVLLLEHNRCCVDVAPGENYTGDEDIYQACRGWTIATFQHITEDELMILLMGRSIGDWT 221
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: A0A6H5K9L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L2_9PHAE) HSP 1 Score: 226 bits (576), Expect = 8.460e-66 Identity = 117/230 (50.87%), Postives = 151/230 (65.65%), Query Frame = 1
Query: 85 REVRAVAAANYSDGVSAVSGTDRPSAREVTTEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGFVDVWCPEGSASEDIEFFRSQADESG----VINPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTG 762
R++R++ A+Y+DG S G DRP+AREV +EVFLA S S +ALFV W LLV YDLFL DN + I C+D DVWCP GS S+ I F RS+A E +P+N AT+++DLD++YGR + +LRT + GYM +T+D +P DDGTWL+ DQR A LPVTFAL +LLR HN CCD +A DED +Q CR WTIA+F+HIT +D+ VR G
Sbjct: 35 RQLRSITEASYADGDSEPPGDDRPTAREVLSEVFLANPSTSSTANALFVGWGLLVGYDLFLTLDNASEPLDIACNDAE-IRDVWCPLGSLSDPIPFSRSEAGEDAGGEEARSPINYATAFVDLDWLYGRDEATSASLRTEDGGYMNMTDDELPHLLDDGTWLVADQRPARLPVTFALMTLLLRGHNRCCDEMAPEWDPANDEDAFQFCRQWTIAVFQHITENDWSVRFVG 263
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 226 bits (576), Expect = 3.340e-63 Identity = 114/213 (53.52%), Postives = 148/213 (69.48%), Query Frame = 1
Query: 175 TEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGF--VDVWCPEGSASEDIEFFRSQA---DESGVIN-----PLNLATSYLDLDFMYGRSVEEAEALRTMENG--YMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILD 777
T+VFL + S SALF+ W L+ +DL L +DN + I C+DG G VDVWCP G+ S+ I F+RS A D+ G ++ P+N AT+++DLDF+YGRS ++A ALR+ +G +M LTE G+P NDDGTWLI DQR+A PVTFALH++LL EHN CC IA G+EGDEDIYQ CRGWTIA+F+HIT +DF++RL G I D
Sbjct: 2 TDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIDCNDGTGAGGVDVWCPLGAESDPIPFYRSDAALSDDDGALSEETRSPVNYATAFVDLDFVYGRSEDDAAALRSSADGDGFMALTESGLPYVNDDGTWLIADQRSAQFPVTFALHVMLLLEHNRCCIDIAPGEGFEGDEDIYQACRGWTIAVFQHITENDFLIRLLGGNIQD 214
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.110e-54 Identity = 104/222 (46.85%), Postives = 141/222 (63.51%), Query Frame = 1
Query: 175 TEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDG--NGFVDVWCPEGSASEDIEFFRSQADES--GVINPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILDYSPIVV---DDVVSSSY 819
T+VFL + + S +S+LF+AW L+ YDL L N T S +PC+D NG +DVWCP G+ASEDI F RS A E GV +P+N A+SY+DLDF+YGRS EEAE LRTME+G+M +T+ G+P QN+DGTWL+ A +G+EGDEDI+Q CRGWTIA+F+H+T +DF++RL G+ + D + DD +S+Y
Sbjct: 2 TDVFLTSTAGLSAKSSLFIAWGQLLTYDLALTVANGTESLDVPCNDADQNGGIDVWCPLGAASEDIPFSRSDAAEGTDGVRSPINYASSYIDLDFVYGRSAEEAELLRTMEDGFMNVTDSGVPFQNEDGTWLV-----------------------------APDMGFEGDEDIFQACRGWTIAIFQHVTQNDFLIRLLGITLTDLGLAMYLGSDDDFTSTY 194
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 195 bits (496), Expect = 2.630e-53 Identity = 110/228 (48.25%), Postives = 139/228 (60.96%), Query Frame = 1
Query: 73 TGNN-----------REVRAVAAANYSDGVSAVSGTDRPSAREVTTEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGFVDVWCPEGSASEDIEFFRSQADESG----VINPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTI 711
TGNN R++R++ A+Y DGVS G DRP+AREV +EVFLA S S +ALFV W LLV YDLFL DN + I C+D DVWCP GS S+ I F RS+A E +P+N AT+++DLD+MYGR + +LRT + GYM +T D +P DDGTWL+ DQR A LPVTFAL +LLREHN CCD +A DE ++ R T+
Sbjct: 50 TGNNLDQPEWGSVGQRQLRSMTEASYGDGVSEPPGDDRPTAREVLSEVFLANPSTTSTANALFVGWGLLVGYDLFLTQDNASEPLDIACNDAE-IRDVWCPLGSLSDPIPFSRSEAGEDAGGEEARSPINYATAFVDLDWMYGRDEATSASLRTEDGGYMNMTNDELPHLLDDGTWLVADQRPARLPVTFALMTLLLREHNRCCDEMAPEWDPANDEAFDEMKRCVTV 276
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Match: A0A6H5K036_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K036_9PHAE) HSP 1 Score: 186 bits (471), Expect = 4.890e-51 Identity = 105/227 (46.26%), Postives = 137/227 (60.35%), Query Frame = 1
Query: 151 RPSAREVTTEVFLAAASVRSPRSALFVAWSLLVPYDLFLNADNETLSFGIPCDDGNGF--------VDVWCPEGSASEDIEFFRSQA---DESGVIN-----PLNLATSYLDLDFMYGRSVEEAEALRTME-NGYMTLTEDGMPVQNDDGTWLIGDQRTAVLPVTFALHIILLREHNICCDTIALSLGYEGDEDIYQVCRGWTIALFEHITSDDFIVRLTGMYILDY 780
RP+AREV T+VFLA+ S SALFVAW+ L+ YDL L D + F I CDDG D+WCP G +++ I FFRS A D+ G + P+N AT+++ LDF+YGRS E+A LR+ + NG++T+ DQRTA VTFALH++LLREHN CC I G + DEDIYQ CRGWTIA+F HIT +DF++RL + D+
Sbjct: 132 RPTAREVMTDVFLASPPAVSTESALFVAWAQLLTYDLSLAVDISSEPFDIACDDGERVEGATGRRETDIWCPLGGSTDPISFFRSDAGLSDDDGTNSAETRSPVNYATAFIGLDFVYGRSEEDAATLRSSDGNGFITIP----------------DQRTARFLVTFALHVVLLREHNRCCVEIEPGEGAKTDEDIYQACRGWTIAVFLHITKNDFLIRLLRGSVSDF 342 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig141.2962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig141.2962.1 >prot_F-serratus_M_contig141.2962.1 ID=prot_F-serratus_M_contig141.2962.1|Name=mRNA_F-serratus_M_contig141.2962.1|organism=Fucus serratus male|type=polypeptide|length=308bp LGHPPLPSPPPLPRLLISLFGGAFTGNNREVRAVAAANYSDGVSAVSGTDback to top mRNA from alignment at F-serratus_M_contig141:465988..468442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig141.2962.1 ID=mRNA_F-serratus_M_contig141.2962.1|Name=mRNA_F-serratus_M_contig141.2962.1|organism=Fucus serratus male|type=mRNA|length=2455bp|location=Sequence derived from alignment at F-serratus_M_contig141:465988..468442- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig141:465988..468442- >mRNA_F-serratus_M_contig141.2962.1 ID=mRNA_F-serratus_M_contig141.2962.1|Name=mRNA_F-serratus_M_contig141.2962.1|organism=Fucus serratus male|type=CDS|length=1848bp|location=Sequence derived from alignment at F-serratus_M_contig141:465988..468442- (Fucus serratus male)back to top |