mRNA_F-serratus_M_contig1409.2956.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: B7ZGM9_9PHAE (Glutaredoxin (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM9_9PHAE) HSP 1 Score: 256 bits (653), Expect = 1.360e-82 Identity = 132/201 (65.67%), Postives = 160/201 (79.60%), Query Frame = 1
Query: 1 RGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATK 603
RGAGVDFGSF+IL+DE+VRAGLK+YS W TFPQLYVKG LVGGVD+ AKLAEGGDLK+QLAV AGVD ++ T+AAA G KS+Q+ CKKL+A AE M+ MKG+PDAPRCGFSR+++ LLR+E I+F SFDILEDQDVRQ LK+L +WPT+PQLYV+GEL+GGLDI+K+MK+ G LA QLG+ K
Sbjct: 2 RGAGVDFGSFDILSDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDDAAKLAEGGDLKAQLAVAAGVDVGKA-TAAAADGSKSVQDRCKKLLAS-----------------AETMVFMKGSPDAPRCGFSRTLVGLLRDEAIEFASFDILEDQDVRQALKELSNWPTYPQLYVKGELVGGLDILKEMKNDGPLAPQLGIKPK 184
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: D7FQR0_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQR0_ECTSI) HSP 1 Score: 244 bits (622), Expect = 8.290e-76 Identity = 128/201 (63.68%), Postives = 153/201 (76.12%), Query Frame = 1
Query: 1 RGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATK 603
RGA VDFGSF+IL DE+VRAGLK+YS W TFPQLYVKG LVGGVDE++KLAE GDLK+ LA AGV +++ T+ A GG KS++E CK ++ R AE M+ MKGTPDAPRCGFSR+++ LLREE I FESFDILEDQ+VR+ LKDL +WPT+PQLYV+GEL+GGLDIVK+MK G LA QLGV K
Sbjct: 168 RGAKVDFGSFDILTDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDEVSKLAEDGDLKNSLANAAGVKPSKN-TAGAVGGGKSVEERCKDIMRR-----------------AETMVFMKGTPDAPRCGFSRTLVGLLREENIAFESFDILEDQEVREVLKDLSNWPTYPQLYVQGELVGGLDIVKEMKLEGPLAPQLGVTPK 350
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: A0A507EKL0_9FUNG (Thioredoxin domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EKL0_9FUNG) HSP 1 Score: 179 bits (454), Expect = 5.290e-52 Identity = 96/193 (49.74%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 10 GVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL 588
GV +GSFNILADEEVR GLK YS W TFPQ+YV G L+GG+D + ++ E G+ + KLV + L S L+K + A ML MKG+PD PRCGFSR I LL+E+GID+++FDILED++VRQ LK WPT+PQLYV GEL GGLDIVK+M SG L + L
Sbjct: 171 GVKYGSFNILADEEVRQGLKEYSNWPTFPQIYVNGELIGGLDILKEMIESGEFQ-------------------------------KLVPAEEDLESRLKKLI---NQAPVMLFMKGSPDTPRCGFSRQITQLLKEQGIDYQTFDILEDEEVRQGLKTFSSWPTYPQLYVNGELAGGLDIVKEMVESGDLKAML 329
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: A0A7S2F7G7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F7G7_9STRA) HSP 1 Score: 177 bits (449), Expect = 6.670e-51 Identity = 94/195 (48.21%), Postives = 128/195 (65.64%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDA---QSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL 588
+ +GSF+IL DEEVRAGLK+YS W T+PQLY +G L+GG+D + + + LAV+ G+ DA SS SAA + + + CK L+ R ++ +L MKG PD PRCGFSR +ALLREE + F+SFDIL D++VRQ LK+L +WPT+PQLYV GEL+GGLD+++++K SG L L
Sbjct: 183 IPYGSFDILQDEEVRAGLKVYSDWQTYPQLYAQGELIGGIDVVKDMQAEDE---SLAVQLGLADATTTDSSGSAAMNVIVDVTQRCKHLMKR-----------------SKVILFMKGNPDEPRCGFSRKCVALLREEKVAFDSFDILTDEEVRQKLKELSEWPTYPQLYVDGELVGGLDVIQELKDSGDLKETL 357
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: A0A7S4A5R4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5R4_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.000e-49 Identity = 93/198 (46.97%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 RGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGV 594
R A V F F+IL DEEVR GLK +S W T+PQ Y G LVGG+D + ++ GDLK QL ++ +DD ++ D+ + + A ++ ML MKG+PD RCGFSR+I+ALLRE ++F+SFDIL D DVRQ LK DWPT+PQLYV GEL+GGLDIV++M + G L QLG+
Sbjct: 168 REASVPFSHFDILTDEEVRQGLKKFSDWPTYPQFYANGELVGGLDILKEMVAEGDLKGQLDLKP-IDD--------------------NIIDGQDEETALNERLKALTSQSKCMLFMKGSPDNERCGFSRTIVALLREHSVEFDSFDILTDNDVRQGLKKFSDWPTYPQLYVDGELVGGLDIVQEMAADGGLKGQLGL 344
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: UPI001263268E (monothiol glutaredoxin-S17-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263268E) HSP 1 Score: 174 bits (440), Expect = 7.800e-49 Identity = 91/192 (47.40%), Postives = 121/192 (63.02%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL 588
VDFGSF+IL DEEVR GLK+YS WS++PQLY+KG L+GG D + ++ + G+LK LA +K+V + L K++ P ML MKGTPDAPRCGFS ++ L+EEG+ F SFDIL D++VRQ LK +WPTFPQLY +GEL+GG DIV +++++G L S L
Sbjct: 273 VDFGSFDILTDEEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGELKKVLA--------------------------EKVVINQKENLEDRLKNIIKSSPV--MLFMKGTPDAPRCGFSSKVVNALKEEGVSFGSFDILSDEEVRQGLKVFSNWPTFPQLYYKGELIGGCDIVLELRNNGELKSTL 436
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: A0A7C9AD02_OPUST (Thioredoxin domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AD02_OPUST) HSP 1 Score: 175 bits (443), Expect = 8.340e-49 Identity = 95/192 (49.48%), Postives = 124/192 (64.58%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL 588
V+F SF+IL+DEEVR G+K+YS WS+FPQLY+KG L+GG D + ++ + G+LK LA + GVK + L +L KL++S + ML MKGTPDAPRCGFS ++ LREEG+ F SFDIL D +VRQ LK +WPT+PQLY +GEL+GG DIV +MK+SG L S L
Sbjct: 329 VEFKSFDILSDEEVRQGIKVYSNWSSFPQLYIKGELIGGSDIMLEMQKSGELKKALAEK---------------GVKPQETLHDRL----KKLITS----------SPVMLFMKGTPDAPRCGFSSKVVNALREEGVPFGSFDILSDDEVRQGLKTFSNWPTYPQLYYKGELVGGCDIVLEMKNSGELKSTL 491
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: A0A7S2A8Z9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z9_TRICV) HSP 1 Score: 171 bits (433), Expect = 1.020e-48 Identity = 93/192 (48.44%), Postives = 120/192 (62.50%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL 588
+ FGSF+IL D+ VR GLK YS W T+PQLYV G LVGG+D + ++AE GDL QL G+D ++S+ A +L + KKL+ R ML MKG P APRCGFSR I+ +L + G+ ++SF+ILED+DVRQ LK DWPT+PQLYV G+L+GGLDIVK+M L L
Sbjct: 175 ISFGSFDILGDDSVRQGLKTYSDWPTYPQLYVNGDLVGGLDIMKEMAEDGDLADQL----GID--KNSSVGALAETMTLDDRLKKLINRQ-----------------RVMLFMKGLPSAPRCGFSRQIVEILEKHGVPYDSFNILEDEDVRQGLKKYSDWPTYPQLYVDGDLIGGLDIVKEMDEGEDLTDLL 343
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: A0A6A4LRH3_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LRH3_9ERIC) HSP 1 Score: 171 bits (434), Expect = 1.020e-48 Identity = 89/192 (46.35%), Postives = 123/192 (64.06%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL 588
V+FG+F+IL DEEVR GLK+YS WS++PQLY+KG L+GG D + ++ + G+L+ L V G+ G ++L++ K+L + ML MKGTPDAPRCGFS ++ LR EG+DF SFDIL D++VRQ LK +WPTFPQLY +GEL+GG DIV +++++G L S L
Sbjct: 195 VEFGTFDILTDEEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGELEKVL-VEKGIT-----------GKETLEDRLKRLTT-----------------DSPVMLFMKGTPDAPRCGFSSKVVEALRNEGVDFGSFDILSDEEVRQGLKAFSNWPTFPQLYYKGELIGGCDIVMELRNNGELKSTL 357
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Match: UPI001E1DFED4 (glutaredoxin 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFED4) HSP 1 Score: 170 bits (431), Expect = 1.360e-48 Identity = 86/194 (44.33%), Postives = 125/194 (64.43%), Query Frame = 1
Query: 7 AGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRKSLAWPRPAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL 588
A V +GSFNIL DEE+R GLK +S W T+PQLY KG L+GG+D + +LAE G+L+SQL + ++D R +L++S + ML MKG +APRCGFS+ +A++++ G+D+++FDIL D++VRQ LK +WPT+PQLYV+GEL+GGLDI+K+++ SG L + L
Sbjct: 166 ASVKYGSFNILEDEEIRQGLKTFSNWPTYPQLYAKGELLGGLDIVKELAESGELESQLPKQTSLED------------------------RLKELINS----------SSVMLFMKGDREAPRCGFSKQTVAIMKDTGVDYKTFDILSDEEVRQGLKKYSNWPTYPQLYVKGELVGGLDIIKELQESGELETIL 325 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1409.2956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1409.2956.1 >prot_F-serratus_M_contig1409.2956.1 ID=prot_F-serratus_M_contig1409.2956.1|Name=mRNA_F-serratus_M_contig1409.2956.1|organism=Fucus serratus male|type=polypeptide|length=207bp RGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLback to top mRNA from alignment at F-serratus_M_contig1409:230478..232091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1409.2956.1 ID=mRNA_F-serratus_M_contig1409.2956.1|Name=mRNA_F-serratus_M_contig1409.2956.1|organism=Fucus serratus male|type=mRNA|length=1614bp|location=Sequence derived from alignment at F-serratus_M_contig1409:230478..232091- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1409:230478..232091- >mRNA_F-serratus_M_contig1409.2956.1 ID=mRNA_F-serratus_M_contig1409.2956.1|Name=mRNA_F-serratus_M_contig1409.2956.1|organism=Fucus serratus male|type=CDS|length=1242bp|location=Sequence derived from alignment at F-serratus_M_contig1409:230478..232091- (Fucus serratus male)back to top |