mRNA_F-serratus_M_contig1409.2955.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: B7ZGM9_9PHAE (Glutaredoxin (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM9_9PHAE) HSP 1 Score: 302 bits (774), Expect = 1.270e-100 Identity = 152/219 (69.41%), Postives = 186/219 (84.93%), Query Frame = 1
Query: 1 RGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
RGAGVDFGSF+IL+DE+VRAGLK+YS W TFPQLYVKG LVGGVD+ AKLAEGGDLK+QLAV AGVD ++ T+AAA G KS+Q+ CKKL+ASAE M+ MKG+PDAPRCGFSR+++ LLR+E I+F SFDILEDQDVRQ LK+L +WPT+PQLYV+GEL+GGLDI+K+MK+ G LA QLG+ K S + RLK L SS + ++LFMKG P+ P+CGFSR
Sbjct: 2 RGAGVDFGSFDILSDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDDAAKLAEGGDLKAQLAVAAGVDVGKA-TAAAADGSKSVQDRCKKLLASAETMVFMKGSPDAPRCGFSRTLVGLLRDEAIEFASFDILEDQDVRQALKELSNWPTYPQLYVKGELVGGLDILKEMKNDGPLAPQLGIKPKESLDSRLKGLISSRS--IVLFMKGTPDAPQCGFSR 217
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: D7FQR0_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQR0_ECTSI) HSP 1 Score: 289 bits (740), Expect = 3.160e-93 Identity = 147/219 (67.12%), Postives = 179/219 (81.74%), Query Frame = 1
Query: 1 RGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
RGA VDFGSF+IL DE+VRAGLK+YS W TFPQLYVKG LVGGVDE++KLAE GDLK+ LA AGV +++ T+ A GG KS++E CK ++ AE M+ MKGTPDAPRCGFSR+++ LLREE I FESFDILEDQ+VR+ LKDL +WPT+PQLYV+GEL+GGLDIVK+MK G LA QLGV K + E RLK L +S + +MLFMKGNP++P+CGFSR
Sbjct: 168 RGAKVDFGSFDILTDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDEVSKLAEDGDLKNSLANAAGVKPSKN-TAGAVGGGKSVEERCKDIMRRAETMVFMKGTPDAPRCGFSRTLVGLLREENIAFESFDILEDQEVREVLKDLSNWPTYPQLYVQGELVGGLDIVKEMKLEGPLAPQLGVTPKENLESRLKRLMTS--SPIMLFMKGNPDSPQCGFSR 383
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: F0WDF2_9STRA (Glutaredoxin putative n=2 Tax=Albugo TaxID=65356 RepID=F0WDF2_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.580e-62 Identity = 105/215 (48.84%), Postives = 143/215 (66.51%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
V +G+F+IL DE VR GLK YS W TFPQLYV G LVGG+D + ++ E G + QL + ++ G ++ QE K LV SA+ ++ MKGTP P+CGFSR ++ LLRE I F SFDIL D+ VRQ LK DWPT+PQ+YV G+L+GGLDI+ D+ G L+ QLGV+ + RE++ + L + + VM+F+KG P+ P+CGFSR
Sbjct: 179 VQYGTFDILQDEAVRQGLKKYSNWPTFPQLYVNGALVGGLDILKEMKEEGSVVDQLGLTKNAEE----------GEEAFQESLKALVHSAKVLVFMKGTPHDPKCGFSRKVVQLLRESSIPFSSFDILSDEQVRQGLKKFSDWPTYPQIYVNGQLVGGLDILNDLAEQGDLSEQLGVSKREKRENKYEALINRAD--VMIFIKGTPQAPQCGFSR 381
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: A0A662YCC6_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCC6_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.010e-61 Identity = 104/215 (48.37%), Postives = 146/215 (67.91%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
+ FG+F+IL D+EVR GLK +S W T+PQLYV G LVGG+D + ++ G + QL + V++A+++ +E + LVASA +L MKG+P P+CGFS+ +ALLRE I F SFDIL D VRQ LK +WPT+PQLYV+G+L+GGLDI+ +M G L+ QLGV KA +E++ + L + RVM+F+KG+P+ P+CGFSR
Sbjct: 180 IQFGTFDILNDDEVRQGLKQFSNWPTYPQLYVNGVLVGGLDILKEMKADGSIVEQLGLAKNVEEAEAA----------FEESLRALVASAPVLLFMKGSPAEPKCGFSKKTVALLREHQIAFSSFDILSDDQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQLGVEKKAKKENKYEQLINRA--RVMIFIKGSPQQPQCGFSR 382
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: H3G569_PHYRM (Uncharacterized protein n=23 Tax=Phytophthora TaxID=4783 RepID=H3G569_PHYRM) HSP 1 Score: 205 bits (522), Expect = 1.130e-60 Identity = 104/215 (48.37%), Postives = 146/215 (67.91%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
+ FG+F+IL D+EVR GLK +S W TFPQLYV G LVGG+D I ++ G + QL + V++A+++ Q+ + LV SA +L MKGTP P+CGFS+ + LLR++ I F SFDIL D+ VRQ LK +WPT+PQLYV+G+L+GGLDI+ +M G L+ QLGV KA +E++ + L + RVM+F+KG+P+ P+CGFSR
Sbjct: 176 IQFGTFDILNDDEVRQGLKQFSNWPTFPQLYVNGALVGGLDIIKEMKADGSIVEQLGLTKNVEEAEAA----------FQDSLRALVNSAPVLLFMKGTPADPKCGFSKKTVKLLRDQQIAFSSFDILSDEQVRQGLKTFSNWPTYPQLYVKGKLVGGLDILNEMAEDGDLSEQLGVEKKAKKENKYEQLINRA--RVMIFIKGSPKQPQCGFSR 378
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: K3W8G0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8G0_GLOUD) HSP 1 Score: 204 bits (520), Expect = 3.060e-60 Identity = 101/215 (46.98%), Postives = 143/215 (66.51%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
+ +G+F+IL DEEVR GLK++S W TFPQLYV G L+GG+D + ++ G + +L ++ V++A+++ E + LV SA +L MKGTP P+CGFS+ + LLR+ I F SFDIL D VRQ LK +WPT+PQLYV+G+L+GGLDI+ +M G L+ QLGVA K RE++ + L + VM+F+KG P+ P+CGFSR
Sbjct: 184 IQYGTFDILNDEEVRQGLKVFSNWPTFPQLYVNGALIGGLDILKEMKSEGSIVEELGLKKNVEEAEAA----------FNESLRALVNSAPVLLFMKGTPQEPKCGFSKKTVKLLRDHQIAFSSFDILSDDQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEEGDLSEQLGVAKKEKRENKYEQLINKAP--VMIFIKGTPQAPQCGFSR 386
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: A0A5K1CKL3_9MAGN (Uncharacterized protein (Fragment) n=3 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1CKL3_9MAGN) HSP 1 Score: 202 bits (514), Expect = 9.330e-60 Identity = 113/236 (47.88%), Postives = 152/236 (64.41%), Query Frame = 1
Query: 10 GVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLK-----------SQLAVRAGVDDAQSSTSAAAGGV-------KSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 654
GVDFGSF+IL D+EVR G+K YS W TFPQL+ KG L+GG D + + E G+LK + L+V A ++A SS + GG+ ++L + L+ S ML MKG PD PRCGFSR ++ +L+EE ++F SFD+L D VRQ LK L +W ++PQ+Y++GEL+GG DI+ +M+ SG L L G+ K S +DRLK L SS ++ MLFMKG PE PRCGFS
Sbjct: 113 GVDFGSFDILTDDEVREGMKKYSNWPTFPQLFCKGELLGGCDIASAMHESGELKEVFRDHGIHLVTSLSVNADTEEA-SSAAGMIGGITESSGLNEALTSRLEDLINSHPVMLFMKGKPDEPRCGFSRKVVEILKEEKVEFSSFDVLTDDTVRQGLKVLSNWSSYPQVYIKGELIGGSDIMLEMQKSGELKRVLDEKGIIPKESLDDRLKKLVSS--SKTMLFMKGTPEAPRCGFS 345
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: A0A0P1A9V6_PLAHL (Grx4 family monothiol glutaredoxin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9V6_PLAHL) HSP 1 Score: 202 bits (513), Expect = 2.920e-59 Identity = 103/215 (47.91%), Postives = 142/215 (66.05%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
+ FGSF+IL D++VR GLK YS W T+PQLYV G LVGG+D + ++ G + QL ++ V++A+++ +E + LV SA +L MKGTP P+CGFS+ + LLRE I F SFDIL D VRQ LK +WPT+PQLYV+G+L+GGLDI+ +M G L+ QLGV K +E++ L + RVM+F+KG P+ P+CGFSR
Sbjct: 178 IQFGSFDILNDDQVRQGLKEYSNWPTYPQLYVNGKLVGGLDILNEMKSEGSIAEQLKLKKNVEEAEAA----------FEEGLRALVNSAPVLLFMKGTPSEPKCGFSQKTVKLLREHEIAFSSFDILSDDQVRQGLKKFSNWPTYPQLYVKGKLIGGLDILNEMAEDGDLSEQLGVDKKTKKENKYHQLINRA--RVMIFIKGTPKQPQCGFSR 380
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: A0A3R7GSS6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GSS6_9STRA) HSP 1 Score: 207 bits (527), Expect = 5.070e-59 Identity = 105/215 (48.84%), Postives = 146/215 (67.91%), Query Frame = 1
Query: 13 VDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 657
V FG+F+IL D+EVR GLK +S W TFPQLYV G+L+GG+D I ++ G + QL + V++++++ QE K LV SA +L MKGTP P+CGFS+ + LLR+ I F SFDIL D+ VRQ LK +WPT+PQLYV+G+L+GGLDI+ +M G L+ QLGV KA +E++ + L + RVM+F+KG+P+ P+CGFSR
Sbjct: 471 VQFGTFDILNDDEVRQGLKQFSNWPTFPQLYVNGSLIGGLDIIKEMKSEGSIVEQLGLTKNVEESEAA----------FQESLKALVNSAPVLLFMKGTPSEPKCGFSKKTVKLLRDHQIAFSSFDILSDEQVRQGLKAFSNWPTYPQLYVKGKLVGGLDILNEMAEDGDLSEQLGVEKKAKKENKYEQLINRA--RVMIFIKGSPKAPQCGFSR 673
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Match: A0A833R056_9POAL (Monothiol glutaredoxin-S11 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R056_9POAL) HSP 1 Score: 201 bits (511), Expect = 7.300e-59 Identity = 110/221 (49.77%), Postives = 148/221 (66.97%), Query Frame = 1
Query: 10 GVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKS-LQELCKKLVASAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL-----GVATKASREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 654
G+ FGSF+IL+D EVR GLK+YS W TFPQLY KG L+GG D I + EGG+L+ V ++ SS S G+ + L K+L+ + M+ MKG+P+ P+CGFS ++A+L+EE + F+SFDIL D+ VRQ LK WP++PQLY++GEL+GG DIV +M +G L S L G A + ++RLK L SS + VMLFMKGNP+ PRCGFS
Sbjct: 176 GISFGSFDILSDNEVREGLKVYSNWPTFPQLYFKGELLGGCDIIVSMKEGGELQDL------VKESNSSDSKDDSGLDAHLVSRLKELIDLSPVMVFMKGSPEEPKCGFSGKLVAILKEECVPFKSFDILSDEAVRQGLKVFSKWPSYPQLYIKGELIGGSDIVLEMHKNGELKSLLEEKSIGKAEAETLDERLKRLISS--SPVMLFMKGNPDEPRCGFS 388 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1409.2955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1409.2955.1 >prot_F-serratus_M_contig1409.2955.1 ID=prot_F-serratus_M_contig1409.2955.1|Name=mRNA_F-serratus_M_contig1409.2955.1|organism=Fucus serratus male|type=polypeptide|length=227bp RGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLback to top mRNA from alignment at F-serratus_M_contig1409:205968..208145- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1409.2955.1 ID=mRNA_F-serratus_M_contig1409.2955.1|Name=mRNA_F-serratus_M_contig1409.2955.1|organism=Fucus serratus male|type=mRNA|length=2178bp|location=Sequence derived from alignment at F-serratus_M_contig1409:205968..208145- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1409:205968..208145- >mRNA_F-serratus_M_contig1409.2955.1 ID=mRNA_F-serratus_M_contig1409.2955.1|Name=mRNA_F-serratus_M_contig1409.2955.1|organism=Fucus serratus male|type=CDS|length=1362bp|location=Sequence derived from alignment at F-serratus_M_contig1409:205968..208145- (Fucus serratus male)back to top |