mRNA_F-serratus_M_contig1409.2953.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: D7FQR0_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQR0_ECTSI) HSP 1 Score: 323 bits (828), Expect = 6.310e-106 Identity = 165/254 (64.96%), Postives = 202/254 (79.53%), Query Frame = 1
Query: 1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 762
PVM+F+K +++EPKCKFSRKM E+LRGA VDFGSF+IL DE+VRAGLK+YS W TFPQLYVKG LVGGVDE++KLAE GDLK+ LA AGV +++ T+ A GG KS++E CK + +R AE M+ MKGTPDAPRCGFSR+++ LLREE I FESFDILEDQ+VR+ LKDL +WPT+PQLYV+GEL+GGLDIVK+MK G LA QLGV K E RLK L +S + +MLFMKGNP++P+CGFSR
Sbjct: 143 PVMLFMKGNAEEPKCKFSRKMAEMLRGAKVDFGSFDILTDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDEVSKLAEDGDLKNSLANAAGVKPSKN-TAGAVGGGKSVEERCKDI----------MRRAETMVFMKGTPDAPRCGFSRTLVGLLREENIAFESFDILEDQEVREVLKDLSNWPTYPQLYVQGELVGGLDIVKEMKLEGPLAPQLGVTPKENLESRLKRLMTS--SPIMLFMKGNPDSPQCGFSR 383
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: B7ZGM9_9PHAE (Glutaredoxin (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM9_9PHAE) HSP 1 Score: 295 bits (755), Expect = 3.690e-97 Identity = 151/230 (65.65%), Postives = 186/230 (80.87%), Query Frame = 1
Query: 73 LRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQLGVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFSR 762
LRGAGVDFGSF+IL+DE+VRAGLK+YS W TFPQLYVKG LVGGVD+ AKLAEGGDLK+QLAV AGVD ++ T+AAA G KS+Q+ CKKL+A +AE M+ MKG+PDAPRCGFSR+++ LLR+E I+F SFDILEDQDVRQ LK+L +WPT+PQLYV+GEL+GGLDI+K+MK+ G LA QLG+ K + RLK L SS + ++LFMKG P+ P+CGFSR
Sbjct: 1 LRGAGVDFGSFDILSDEQVRAGLKVYSNWPTFPQLYVKGVLVGGVDDAAKLAEGGDLKAQLAVAAGVDVGKA-TAAAADGSKSVQDRCKKLLA----------SAETMVFMKGSPDAPRCGFSRTLVGLLRDEAIEFASFDILEDQDVRQALKELSNWPTYPQLYVKGELVGGLDILKEMKNDGPLAPQLGIKPKESLDSRLKGLISSRS--IVLFMKGTPDAPQCGFSR 217
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: G7ZZ90_MEDTR (Monothiol glutaredoxin-S17 protein n=7 Tax=IRL clade TaxID=2233839 RepID=G7ZZ90_MEDTR) HSP 1 Score: 238 bits (606), Expect = 4.160e-72 Identity = 130/260 (50.00%), Postives = 169/260 (65.00%), Query Frame = 1
Query: 1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSS----TSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
PV++F+K S +EPKC FSRK+V+IL+ V FGSF+IL+D EVR GLK +S W TFPQLY KG LVGG D + E G+LK G+D + + GG+ +L L +R D L++S ML MKG PD P+CGFSR ++ +LR+E + FESFDIL D++VRQ LK +W ++PQLY++GEL+GG DIV +M+ SG L L GV K EDRLK L +S + VMLFMKG P+ PRCGFS
Sbjct: 168 PVLLFMKGSPEEPKCGFSRKVVDILKEEKVKFGSFDILSDSEVREGLKKFSNWPTFPQLYCKGELVGGCDIAIAMHESGELKDVFKDH-GIDTVDETNITDSGNTKGGISKSTDLSTNLASRLDGLVNS---GSVMLFMKGKPDEPKCGFSRKVVEILRQENVPFESFDILTDEEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGELQKTLHEKGVLPKETIEDRLKKLIAS--SPVMLFMKGTPDAPRCGFS 421
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: UPI001CC3F326 (monothiol glutaredoxin-S17 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3F326) HSP 1 Score: 237 bits (604), Expect = 1.030e-71 Identity = 134/267 (50.19%), Postives = 172/267 (64.42%), Query Frame = 1
Query: 4 VMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKS----QLAVRAGVDDAQ--------SSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
VM+F+K + +EP+C FSRK+VEIL+ GV FGSF+IL D E+R GLK +S W TFPQLY KG L+GG D + + E G+LK Q + AG D+A+ S+ S GV L L +R + L +S + ML MKG P+ PRCGFS ++ +LR+E +DFESFDIL D +VRQ LK +W ++PQLY+ GEL+GG DIV +M+ SG L L GV K EDRLK LFSS + VMLFMKG P+ PRCGFS
Sbjct: 170 VMLFMKGNPEEPRCGFSRKVVEILKEEGVKFGSFDILTDNELREGLKKFSNWPTFPQLYCKGLLLGGCDIVIAMHESGELKEVFGDQGVLAAGPDEAKKTGTGNIYSTNSLQCSGVSDSTGLSTALTSRLESLTNS---SPVMLFMKGKPEEPRCGFSSKVVEILRQEKVDFESFDILTDDEVRQGLKVYSNWSSYPQLYIGGELIGGSDIVLEMQKSGELMRVLAEKGVTNKEPLEDRLKKLFSS--SPVMLFMKGTPDAPRCGFS 431
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A5K1CKL3_9MAGN (Uncharacterized protein (Fragment) n=3 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1CKL3_9MAGN) HSP 1 Score: 234 bits (597), Expect = 1.240e-71 Identity = 128/267 (47.94%), Postives = 173/267 (64.79%), Query Frame = 1
Query: 1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLK-----------SQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
PV +F+K S PKC FS+K+V IL+ GVDFGSF+IL D+EVR G+K YS W TFPQL+ KG L+GG D + + E G+LK + L+V A ++A SS + GG+ L + L +R + L++S ML MKG PD PRCGFSR ++ +L+EE ++F SFD+L D VRQ LK L +W ++PQ+Y++GEL+GG DI+ +M+ SG L L G+ K +DRLK L SS ++ MLFMKG PE PRCGFS
Sbjct: 85 PVFLFMKGSPDAPKCGFSQKVVNILKEEGVDFGSFDILTDDEVREGMKKYSNWPTFPQLFCKGELLGGCDIASAMHESGELKEVFRDHGIHLVTSLSVNADTEEA-SSAAGMIGGITESSGLNEALTSRLEDLINS---HPVMLFMKGKPDEPRCGFSRKVVEILKEEKVEFSSFDVLTDDTVRQGLKVLSNWSSYPQVYIKGELIGGSDIMLEMQKSGELKRVLDEKGIIPKESLDDRLKKLVSS--SKTMLFMKGTPEAPRCGFS 345
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A061GFS9_THECC (Glutaredoxin S17 n=4 Tax=Malvaceae TaxID=3629 RepID=A0A061GFS9_THECC) HSP 1 Score: 236 bits (601), Expect = 2.200e-71 Identity = 128/256 (50.00%), Postives = 169/256 (66.02%), Query Frame = 1
Query: 1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
PVM+F+K S +EPKC FSRK+V+IL V FG+F+I++D EVR GLK +S W TFPQLY KG L+GG D + + E G+LK GVD S T GG+ + L L +R L++S + ML MKG PD P+CGFS ++ +L +E +DF+SFDIL D +VRQ LK L +W ++PQLY++GEL+GG DIV +M+ SG L L G+ K EDRL++L SS + VMLFMKG P+ PRCGFS
Sbjct: 173 PVMLFMKGSPEEPKCGFSRKVVDILNDERVKFGTFDIISDNEVREGLKKFSNWPTFPQLYCKGELLGGCDIVIAMHESGELKEVFRDH-GVD--VSGTEQGTGGISAPSGLSTNLASRLQSLINS---SPVMLFMKGKPDEPKCGFSHKVVEILEQEKVDFKSFDILLDDEVRQGLKVLSNWSSYPQLYIKGELIGGSDIVLEMQKSGELRRVLAEKGITKKESIEDRLRSLISS--SPVMLFMKGTPDAPRCGFS 420
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A6A6LPJ7_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LPJ7_HEVBR) HSP 1 Score: 232 bits (592), Expect = 6.080e-71 Identity = 127/262 (48.47%), Postives = 171/262 (65.27%), Query Frame = 1
Query: 1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVD------DAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
PVM+F+K S + P+C FSRK+V+IL+ V FGSF+IL+D EVR GLK +S W TFPQLY KG L+GG D + E G+LK G+D QS + + GGV L L +R L++S + ML MKG PD P+CGFS ++ +L+EE ++FESF+IL D +VRQ LK +W +FPQLY++GEL+GG DIV +M+ SG L L G+ +K EDRL++L +S + VMLFMKG+P+ PRCGFS
Sbjct: 85 PVMLFMKGSPEAPRCGFSRKVVDILKDENVKFGSFDILSDNEVREGLKKFSNWPTFPQLYCKGELLGGSDIAIAMHESGELKDVFRDH-GIDANHSDEQKQSDSGSGKGGVSESTGLSATLTSRLKSLINS---SPVMLFMKGNPDEPKCGFSGKVVEILKEEKVNFESFNILSDDEVRQGLKVYSNWSSFPQLYIKGELIGGSDIVLEMQKSGELKRLLVEKGIVSKETLEDRLRSLIAS--SPVMLFMKGSPDAPRCGFS 340
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A068TU35_COFCA (Thioredoxin domain-containing protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068TU35_COFCA) HSP 1 Score: 234 bits (598), Expect = 6.320e-71 Identity = 129/262 (49.24%), Postives = 173/262 (66.03%), Query Frame = 1
Query: 1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAA------GGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
PVM+F+K S +EP+C FSR +V+IL+ + FGSF+IL D+EVR GLK +S W T+PQLY KG L+GG D + + E G+LK L + G + + SS + A GG+ L L +R D L++S + ML MKG PDAPRCGFSR ++ +LR+E IDF+SFDIL D +VRQ LK +W ++PQLY++GEL+GG DIV DM+ SG L+ L G+ + E RLK L +S + VMLFMKG P+ RCGFS
Sbjct: 166 PVMLFMKGSPEEPRCGFSRTVVDILKKEKIKFGSFDILTDDEVREGLKKFSNWPTYPQLYCKGELLGGCDIVTAMHESGELKEVL-LDHGTEASDSSKAEATEPGMGKGGISEASGLSADLNSRLDSLINS---SPVMLFMKGEPDAPRCGFSRKVVDILRQEKIDFKSFDILTDDEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLDMQKSGELSKVLAEKGIPNGITLEVRLKQLITS--SPVMLFMKGTPDASRCGFS 421
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A166IRX7_DAUCS (Thioredoxin domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166IRX7_DAUCS) HSP 1 Score: 234 bits (598), Expect = 6.810e-71 Identity = 130/264 (49.24%), Postives = 172/264 (65.15%), Query Frame = 1
Query: 4 VMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDL---------KSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL---GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
VM+F+K + QEP+C FSRK+V+IL+ V FGSF+IL D EVR GLK +S W T+PQLY KG L+GG D + + EGG+L KS + A V +A+ GG+ L L +R + L++S ML MKG PD P+CGFSR ++ +LREE ++FESFDIL D++VRQ LK +W ++PQLY++GEL+GG DIV +M+ SG L + L G+ K EDRLK L SS + VMLFMKG P+ PRCGFS
Sbjct: 170 VMLFMKGNPQEPQCGFSRKVVDILKEYDVKFGSFDILTDNEVREGLKKFSNWPTYPQLYCKGELIGGSDIVIAMHEGGELTEVFGDHGIKSSHSREAKVTEAEIGK----GGISGSSGLSATLTSRLEGLINS---GSVMLFMKGKPDEPKCGFSRKVVDILREEKVEFESFDILSDEEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGELKNVLAEKGIIQKQTLEDRLKKLISS--SPVMLFMKGTPDAPRCGFS 424
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Match: A0A833R056_9POAL (Monothiol glutaredoxin-S11 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R056_9POAL) HSP 1 Score: 233 bits (595), Expect = 7.720e-71 Identity = 128/258 (49.61%), Postives = 171/258 (66.28%), Query Frame = 1
Query: 1 PVMVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKWSTFPQLYVKGTLVGGVDEIAKLAEGGDLKSQLAVRAGVDDAQSSTSAAAGGVKSLQELCKKLVARYDKLLSSLRNAEAMLIMKGTPDAPRCGFSRSIMALLREEGIDFESFDILEDQDVRQCLKDLFDWPTFPQLYVRGELMGGLDIVKDMKSSGSLASQL-----GVATKVLREDRLKTLFSSMNNRVMLFMKGNPETPRCGFS 759
PV +F+K S +EPKCKFSRK+V IL+ G+ FGSF+IL+D EVR GLK+YS W TFPQLY KG L+GG D I + EGG+L+ V ++ SS S G+ + LV+R +L+ + M+ MKG+P+ P+CGFS ++A+L+EE + F+SFDIL D+ VRQ LK WP++PQLY++GEL+GG DIV +M +G L S L G A ++RLK L SS + VMLFMKGNP+ PRCGFS
Sbjct: 148 PVFLFMKGSPEEPKCKFSRKVVGILKDEGISFGSFDILSDNEVREGLKVYSNWPTFPQLYFKGELLGGCDIIVSMKEGGELQDL------VKESNSSDSKDDSGLDA------HLVSRLKELIDL---SPVMVFMKGSPEEPKCGFSGKLVAILKEECVPFKSFDILSDEAVRQGLKVFSKWPSYPQLYIKGELIGGSDIVLEMHKNGELKSLLEEKSIGKAEAETLDERLKRLISS--SPVMLFMKGNPDEPRCGFS 388 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1409.2953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1409.2953.1 >prot_F-serratus_M_contig1409.2953.1 ID=prot_F-serratus_M_contig1409.2953.1|Name=mRNA_F-serratus_M_contig1409.2953.1|organism=Fucus serratus male|type=polypeptide|length=260bp MVFIKDSSQEPKCKFSRKMVEILRGAGVDFGSFNILADEEVRAGLKIYSKback to top mRNA from alignment at F-serratus_M_contig1409:152073..154741- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1409.2953.1 ID=mRNA_F-serratus_M_contig1409.2953.1|Name=mRNA_F-serratus_M_contig1409.2953.1|organism=Fucus serratus male|type=mRNA|length=2669bp|location=Sequence derived from alignment at F-serratus_M_contig1409:152073..154741- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1409:152073..154741- >mRNA_F-serratus_M_contig1409.2953.1 ID=mRNA_F-serratus_M_contig1409.2953.1|Name=mRNA_F-serratus_M_contig1409.2953.1|organism=Fucus serratus male|type=CDS|length=1560bp|location=Sequence derived from alignment at F-serratus_M_contig1409:152073..154741- (Fucus serratus male)back to top |