mRNA_F-serratus_M_contig1409.2948.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1409.2948.1
Unique NamemRNA_F-serratus_M_contig1409.2948.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1409.2948.1 vs. uniprot
Match: D7FQS8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQS8_ECTSI)

HSP 1 Score: 862 bits (2228), Expect = 4.490e-301
Identity = 452/802 (56.36%), Postives = 589/802 (73.44%), Query Frame = 1 
Query:  187 MNTKLCALYGCFEGTEDDAIDYRDVLCCMMLLRQYKKIREAPRMLFQNLILVFSNEAGTKVLRQNALRVARMGAVHGDDILETSSRLDRYLAEEAGSRGLKPNFRVLDVIFLMEVIESHPSILAAFGTQVWQHVPKSWRMGDIFAMQA------TEALTTMKLERAWRWYATKLSRRVIVGWKTFKNRSKLTKAHRAAVARVTRRHAVRAWHSRASREA--RRHRVVTRKRLRIVFLRRYFKRLVHFTKARKKLSAITFAFSKRGKIVVYGMGLLCRVLKKRLVRLSLRAWCQTACLMTAWEFAVKLSQTRLRRRTFFSLRDTVRTLVTARRLEDEAEARASWIAETVKEAERDKKLLAAAAV-------SEAKATLMRARTAEHRARIEGERARSAARDASKLARQREVRRRRVYEDCARATRNFEAEWVTKVNDIAEKEMEMTRSRLRINTVARFRIQKELKILKGKFFAGPTPGTANLERHLSDPANAIFAKVANLLFNENKSFHTFFDRFDQEGDGYLSHEEFEAMVSSLDINLSGEQVRAVIRAIDVXXXXYIDFSEFEAAVQRHEEVCGVAGSPWKMYVSPVHAIMILHNIETNEEIWDYKATDNDLERVVVDNMIAIDGIAAKKKALQKRQEAWSRLLRDRAAMMLQRRYHVWTARKKRARLSWKRDLENVKERAISESKACTQIQCWWRKLRAKWLALRLLQITVEVLFDPGYNDQYYFNHGSGCSSWEVPKMLTRWHGHDARMPEIAEWVLISRTFGQSYYYNTRSRLQQDDKPPGYMRCFTCVTQLATRRCK 2547
            M+T+L +LY C+EG    A+DYRD+LCC ++LR++K IR+ PR LF++LIL++S++ G  V RQ+ALRV R+GA+HG  IL+TS+RLD+YLAEEA  RGLKP FR LD+ FLM+ IE++PSIL AF TQ+WQ +P++WR+G + A++A      +     MK  RA RWY   LSRR+IVGWK F+NR+K  +A R  +  V RR  +RAWH+ A+     R+ R V  +  RI  LRRYF  +V + +  K+L+A+ + FSK+GK+V+ G+GLL  VL+KR +RL+L+AWC+TA LM AW FAV L+  RL RR F +LRDTVR  V ARR EDEAE RA+ +AE+++EAER++ LLA  A        +E KA LM  R AEH  +IE  RA S ARDA  L RQRE RRRRVYE+  +   +F+A W  K+ +  E+EME+ +  L  +  A F++QKE+KILK KF+A P P TA LER L DPAN IFA +ANL++ ENK+   FF++FD+EGDGYL+HEEF+ MVSSL++ LS EQ+R+VIR ID+    +IDF EFEAAV+RHE+VCG AGS WKMYVSPVHAIM  HN+ETNE +WDYKATD DL RVV DN++ ++GI AKK+A++ R++ W  LLR+RAA  +QR+YH W ARK+RA L WK D+E  + +    +   T+IQCWWR LRAKWLAL+LLQIT+EVL+DPG N QYYFNHG   ++WEVP ML RW G  A+MP + EWVLISR FGQSY+YNTRSRL+QD+KP GY+RC +C TQLA+RR K
Sbjct:    1 MDTRLRSLYECYEGARAGAVDYRDILCCTIVLRRFKDIRDNPRKLFRDLILLYSDDEGEVVRRQDALRVMRIGALHGGHILQTSTRLDKYLAEEARPRGLKPTFRDLDITFLMDTIEANPSILVAFRTQLWQRIPEAWRLGVLQAVEAMGFEKASSGAMAMKERRAVRWYTKTLSRRIIVGWKVFRNRAKQIRAQRERIQNVRRRQTLRAWHASAAIHVLRRKRRGVADQYGRICTLRRYFYSIVKYVEVNKRLAAVAWKFSKQGKLVMAGVGLLRGVLRKRSMRLALQAWCETASLMNAWGFAVDLAGERLCRRVFAALRDTVRAAVVARRAEDEAEMRAAALAESIEEAERERVLLAELAEERKKRQKAEEKAALMARRAAEHVEKIEAARAGSVARDAEVLQRQREARRRRVYENRVKVKNDFDAAWEVKLRETVEREMELAKEWLATDPEAPFKVQKEMKILKRKFYAAPLPETAELERALRDPANYIFAHMANLIYKENKTLQMFFNQFDKEGDGYLTHEEFKGMVSSLNVKLSREQIRSVIRTIDLDGGGFIDFPEFEAAVKRHEDVCGQAGSVWKMYVSPVHAIMTFHNVETNEILWDYKATDKDLLRVVKDNIVGLEGIEAKKRAVEDREKEWEELLRNRAATTMQRQYHAWAARKRRALLRWKWDVEKARAKNRETTLMATRIQCWWRILRAKWLALQLLQITIEVLWDPGLNQQYYFNHGLEQAAWEVPSMLRRWRGRGAKMPSVPEWVLISRLFGQSYFYNTRSRLRQDEKPAGYLRCSSCQTQLASRRWK 802
[Close]
BLAST of mRNA_F-serratus_M_contig1409.2948.1 vs. uniprot
Match: A0A836CKE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE2_9STRA)

HSP 1 Score: 260 bits (665), Expect = 8.060e-69
Identity = 219/713 (30.72%), Postives = 327/713 (45.86%), Query Frame = 1 
Query:   70 RFHSITRALEATPGMAYTVGRNAFIQRLMAEYKFDRSLRMNTKLCALYGCFEGTEDDAIDYRDVLCCMMLLRQYKKIREAPRMLFQNLILVFSNEAGTKVLRQNALRVARMGAVHGDDILETSSRLDRYLAEEAGSRGLKPNFRVLDVI--------------FLMEVIESHPSILAAFGTQVWQHVPKSWRMG------DIFAMQATEALTTMKLERAWRWYATKLSRRVIVG-----WKTFKNRSKLTKAHRAAVARVT------------------------------------RRHAVRAWHSRASREARRHRVVTRKRLRIVFLRRYFKRLVHFTKARKKLSAITFAFSKRGKIVVYGMGLLCRVLKKRLVRLSLRAWCQTACLMTAWEFAVKLSQTRLRRRTFFSLRDTVRTLVTARRLEDEAEARASW----------------IAETVKEAERDKKLLAAAAVSEAKATLMRARTAEHRARIEGERARSAARDASKLARQREVRRRRVYEDCARATRNFEAEWVTKVNDIAEKEMEMTRSRLRINTV-------ARFRIQKELKILKGKFFAGPTPGTANLERHLSDPANAIFAKVANLLFNENKSFHTFFDRFDQEGDGYLSHEEFEAMVSSLDINLSGEQVRAVIRAIDVXXXXYIDFSEFEAAVQRHEEVCGVAGSPWKMYVSPVHAIMILHNIETNEEIWD 1956
            R  +  +A  ATP  A ++     +    A   F    R   +L ALY   +G    A+D R++    +LLRQ++ IRE+PR L   L  +F+ + G  + R +AL+V  + A    D+  T+ ++DR+L E A S  LKP F++L V                 ++V+++H ++L+A  + +W  VP  WR+       D    + + AL+ +K  RA         RR +VG     W+ F  R ++ +  R  V R                                      R   +RA  + A++  R      R  L +    R  +R      AR +++   +  S  GK V+ G+     V ++   R +LR WC+TA LM+AW+FAV  S  R RRR F +LR  V   ++ RRLE E                       +AE  +E  R                                     AR+ + L  Q+  RR+RV +  A A    +A W      +  +E+     R R   +       AR+ ++K +  L+ +F A P+P TA LER L+DPAN +FA VA+ L++ + +   FF+ FD E DGYL+  EFE +V+SL I L GE+VRA+ R+ID      ID  EF+AA+ RHE+VCG AGSPWKMYVSPVH +M LH+IET E+  D
Sbjct:  431 RHMAAAQAQAATPDFAASLAPAIHVDA-SALRLFPGDARAEQRLRALYRAHDGAAQGAVDLREIAAGALLLRQHRLIRESPRQLLVALCELFTKDGGELLARSDALKVVSLAATTATDVYLTAGKMDRHLEEMAASYNLKPTFKMLPVSPAGRGARDAAVSLDLFLDVLDTHTALLSAIASTMWARVPAQWRLTCLQEAEDAGIGRLSAALSAIKAARA-----AAHRRRALVGAHWRAWRRFAERCRVERHQRETVLRCRCAXXXXXXXXXXXXXXXXXXXXNAAAAMGAGRILRLRLAQLRAATAEAAQRLR------RGALAVSDTERCLRRCGRAASARHRVTRALWTSSAAGKRVLLGVARWRAVERRARQRSALRRWCETASLMSAWDFAVATSGERPRRRAFRALRAYVAHALSQRRLETEXXXXXXXXXXXXXXXXXXXXXXXLAEEAQERARXXXXXXXXXXXXXXXXXXXXXXXXXA---------GVARERAVLQEQQAARRQRVRDQAAAALEQHKAYWA-----VHTEELVAAARRRRCEWLSGGGGDAARYEVEKGVAALRRRFLAAPSPETAQLERALADPANIVFAFVASRLWSRHVTLRDFFNEFDVEHDGYLAPAEFETLVASLGIQLDGEKVRAMTRSIDADGGGLIDCDEFQAAMARHEQVCGHAGSPWKMYVSPVHGVMTLHSIETGEQRLD 1117
[Close]
BLAST of mRNA_F-serratus_M_contig1409.2948.1 vs. uniprot
Match: F0YL46_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL46_AURAN)

HSP 1 Score: 214 bits (545), Expect = 4.300e-54
Identity = 220/897 (24.53%), Postives = 391/897 (43.59%), Query Frame = 1 
Query:   19 KWTGVRLLHRVINQPAYRFHSITRAL-EATPGMAY----TVGRNAFIQRLMAEYKFDRSLRMNTKLCALYGCFEGTEDDAIDYRDVLCCMMLLRQYKKIREAPRMLFQNLILVFS--NEAGTKVLRQNALRVARMGAVHGDDILETSSRLDRYLAEEAGSRGLKPNFRVLDVIFLMEVIESHPSILAAFGTQVWQHVPKSWRMGDIFAMQATEALTT---------MKLERAWRWYATKLSRRVIVGWKTFKNRSKLTKAHRAAVARVTRRHAVRAWH-----SRASREARR------HRVVTRKRLRIVFLRRYFKRLVHFTKARKKLSAITFAFSKRGKIVVYGMGLLCRVLKKRLVRLSLRAWCQTACLMTAWEFAVKLSQTRLRRRTFFSLRDTVRTLVTARRLEDEAEARASWIAETVKEAERDKKLLAAAAVSEAKATLMRARTAEHRA----------RIEGERARSAARDASKLARQREVRRRRVYEDCARATRNFEAEWVTKVNDIAEKEMEMTRSRLRINTVARFRIQKELKILKGKFFAGPTPGTANLERHLSDPANAIFAKVANLLFNENKSFHTFFDRFDQEGDGYLSHEEFEAMVSSLDINLSGEQVRAVIRAIDVXXXXYIDFSEFEAAVQRHEEVCGVAGSPWKMYVSPVHAIMILHNIETNEEIWDYKATDNDLERVVVDNMIAIDGIAAKKKALQKRQEAWSRLLRDRAAMMLQRRYHVWTARKKRARLSWKRDLENVKERAISESKACTQIQCWWRKLRAKWLALRLLQITVEVLFDPGYNDQYYFNHGSGCSSWEVPKMLTRWHGHDARMPEIAEWVLISRTFGQSYYYN-----TRSRLQQDDKPPGYMRCFTCVTQLATRRCKIERRDLCFLCYR 2583
            KW  +R LH +    A+R   +   L + +PG       T+G + F+  L   + F+R + ++ +L  LY CF+G E++ +D+R+V+C +        +   P  L  +   ++S        V R + +R+  + A    +    S ++  +L +            ++ +    E +   P +  AF +Q+W+ +P    +  +  +Q  E  T            +++A +     L  R   GW     + ++ K  R  V     R  +  W+      RAS E R+      HR + R   R+V LR +      ++   +++  I+ AF +R   V +G  L+ R +     R +++ W       +  + A KL +  L +R F      V  +  AR  E+++     ++   ++ A ++   LAA  +++ +    +    + RA          +    +A  AA D  KLA Q++ R +R+ E+      +F A W        E++   TR  L  +  ++  + KE K +K +F+  PTP +   ER+L   ++ +  K+  +LF +      F  ++D++  G+LSH EF ++V  L I+LS EQ+R VI  +D     Y+   E E A+       GV+ SPW+MYV P   ++  HN+ T+E I++++ +D  L  V   N +A       +  L+    AW+R+  + A+++L R Y  + +R++  RL WK      K+      K  T++QCWWR + A  L    L+  VE++ D                 +E    L R  G         ++VL      Q Y+        R+ L+   KPPGY RC +C+  LA   C       CF C+R
Sbjct:   12 KWRLLRYLHSLRQHAAHRCVCVENILWKISPGHFKEHHETIGADLFVSALANGFGFERRVPVHHQLMQLYHCFDGAEENRVDWREVVCSLYAFDSTGHVHSHPIKLLTSFFRLYSLPTTNANIVPRVDVIRMISLAATTHAEFTAVS-QIGHHLPD------------MVKLTAFREALIGTPQVTEAFRSQLWKRLPD---LSKLTYLQLQEDATARWFEGYIHQQNMKKAVKLRKQSLLCRSFRGWCQLSKKMRIVKIQRRIVLLRKCRALISWWNLYAVERRASFERRQVAAVLGHRALVR---RVVILRWH-----RWSCNERRVRHISGAFRRRAVDVSHGSFLVRRAMACVYRRDAIQRWSDWIKAASQADGATKLMRKLLAKRFFAGWHSHVHFVKLARTAEEDSIRNQIYLTAMIQGAGQE---LAATIMADEQNQRSKREDGKQRALSDKLHTLAWKTRRRQAEHAADDRVKLAVQQDARAKRIAENKEDRAASFHAAWAAIERQYIEEQRLATRRWLD-SGASKNHVSKEFKRIKREFYRPPTPRSMERERNLKALSSIVLIKMEAILFQKGIVMEHFIRQYDEDSSGFLSHNEFRSLVKDLPIDLSAEQIRLVIHTLDSDHDGYVGLKELEKALDIVHAHNGVSASPWRMYVDPAQDVICYHNLATDELIFEHRMSDRKLMEVTKSNFLA-------ETELEAINHAWTRVRENYASVVLARMYRGFKSRRELGRLMWKIQARRQKKDTDRCEKQATRLQCWWRSILACQLYDIKLRHDVEIVPD----------------LFERRLCLQRHRGS-------IDYVLAVEQ-NQMYFVKWSTSQERAHLRTWAKPPGYQRCTSCLRNLALLECTTTPGVFCFRCFR 849
[Close]
BLAST of mRNA_F-serratus_M_contig1409.2948.1 vs. uniprot
Match: F0YSI9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YSI9_AURAN)

HSP 1 Score: 117 bits (292), Expect = 9.820e-25
Identity = 69/227 (30.40%), Postives = 118/227 (51.98%), Query Frame = 1 
Query: 1330 AARDASKLARQREVRRRRVYEDCARATRNFEAEWVTKVNDIAEKEMEMTRSRLRINTVARFRIQKELKILKGKFFAGPTPGTANLERHLSDPANAIFAKVANLLFNENKSFHTFFDRFDQEGDGYLSHEEFEAMVSSLDINLSGEQVRAVIRAIDVXXXXYIDFSEFEAAVQRHEEVCGVAGSPWKMYVSPVHAIMILHNIETNEEIWDYKATDNDLERVVVDNMIA 2010
            AA D  KLA Q++ R +R+  +      +F+A W    +    ++   TR  L  + +++  + KE K LK +F+  PTP +   E  L   ++ +  K+  +LF +      F  ++D++  G+LSH EF A+V  L I+LS EQVR VI  +D     Y+   E E A+    +  G++ SPW+MY+ P   ++  HNI T+  +++++  D  L  +   N +A
Sbjct:    6 AADDRIKLAVQQDSRAKRISTEKEDRAASFQAAWDAMEHQYIHEQSMATRRWLD-SRISKNHVLKEFKRLKREFYRPPTPRSIGREVKLKSLSSIVLIKMEAVLFQKGIVMEHFIRQYDEDSSGFLSHNEFRALVGDLPIDLSPEQVRLVISTLDSDQDGYVGLKELEKALDVVHQFNGLSASPWRMYIDPAQDVICYHNIATDRLVFEHRMNDKILLEITKSNFLA 231
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1409.2948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FQS8_ECTSI4.490e-30156.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKE2_9STRA8.060e-6930.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YL46_AURAN4.300e-5424.53Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0YSI9_AURAN9.820e-2530.40Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1409contigF-serratus_M_contig1409:27341..38817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score870.2
Seed ortholog evalue8.7e-250
Seed eggNOG ortholog2880.D7FQS8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.EF-hand, calcium binding motif
EggNOG OGs2CJ0G@1,2SKVK@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-01_000370.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2961
Cds size2715
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929390.9384873-UTR-F-serratus_M_contig1409:27340..274261622929390.9384873-UTR-F-serratus_M_contig1409:27340..27426Fucus serratus maleUTRF-serratus_M_contig1409 27341..27426 -
1690962830.7402909-UTR-F-serratus_M_contig1409:27340..274261690962830.7402909-UTR-F-serratus_M_contig1409:27340..27426Fucus serratus maleUTRF-serratus_M_contig1409 27341..27426 -
1622929390.953214-UTR-F-serratus_M_contig1409:27458..275071622929390.953214-UTR-F-serratus_M_contig1409:27458..27507Fucus serratus maleUTRF-serratus_M_contig1409 27459..27507 -
1690962830.7516868-UTR-F-serratus_M_contig1409:27458..275071690962830.7516868-UTR-F-serratus_M_contig1409:27458..27507Fucus serratus maleUTRF-serratus_M_contig1409 27459..27507 -
1622929391.0545049-UTR-F-serratus_M_contig1409:38706..388171622929391.0545049-UTR-F-serratus_M_contig1409:38706..38817Fucus serratus maleUTRF-serratus_M_contig1409 38707..38817 -
1690962830.8053389-UTR-F-serratus_M_contig1409:38706..388171690962830.8053389-UTR-F-serratus_M_contig1409:38706..38817Fucus serratus maleUTRF-serratus_M_contig1409 38707..38817 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929390.9684327-CDS-F-serratus_M_contig1409:27507..278911622929390.9684327-CDS-F-serratus_M_contig1409:27507..27891Fucus serratus maleCDSF-serratus_M_contig1409 27508..27891 -
1690962830.7595117-CDS-F-serratus_M_contig1409:27507..278911690962830.7595117-CDS-F-serratus_M_contig1409:27507..27891Fucus serratus maleCDSF-serratus_M_contig1409 27508..27891 -
1622929390.9815416-CDS-F-serratus_M_contig1409:34498..348561622929390.9815416-CDS-F-serratus_M_contig1409:34498..34856Fucus serratus maleCDSF-serratus_M_contig1409 34499..34856 -
1690962830.7668571-CDS-F-serratus_M_contig1409:34498..348561690962830.7668571-CDS-F-serratus_M_contig1409:34498..34856Fucus serratus maleCDSF-serratus_M_contig1409 34499..34856 -
1622929391.0012593-CDS-F-serratus_M_contig1409:35807..360341622929391.0012593-CDS-F-serratus_M_contig1409:35807..36034Fucus serratus maleCDSF-serratus_M_contig1409 35808..36034 -
1690962830.7742188-CDS-F-serratus_M_contig1409:35807..360341690962830.7742188-CDS-F-serratus_M_contig1409:35807..36034Fucus serratus maleCDSF-serratus_M_contig1409 35808..36034 -
1622929391.0152054-CDS-F-serratus_M_contig1409:36298..364631622929391.0152054-CDS-F-serratus_M_contig1409:36298..36463Fucus serratus maleCDSF-serratus_M_contig1409 36299..36463 -
1690962830.7813833-CDS-F-serratus_M_contig1409:36298..364631690962830.7813833-CDS-F-serratus_M_contig1409:36298..36463Fucus serratus maleCDSF-serratus_M_contig1409 36299..36463 -
1622929391.0307522-CDS-F-serratus_M_contig1409:36805..372881622929391.0307522-CDS-F-serratus_M_contig1409:36805..37288Fucus serratus maleCDSF-serratus_M_contig1409 36806..37288 -
1690962830.7887135-CDS-F-serratus_M_contig1409:36805..372881690962830.7887135-CDS-F-serratus_M_contig1409:36805..37288Fucus serratus maleCDSF-serratus_M_contig1409 36806..37288 -
1622929391.0443153-CDS-F-serratus_M_contig1409:37608..387061622929391.0443153-CDS-F-serratus_M_contig1409:37608..38706Fucus serratus maleCDSF-serratus_M_contig1409 37609..38706 -
1690962830.7977526-CDS-F-serratus_M_contig1409:37608..387061690962830.7977526-CDS-F-serratus_M_contig1409:37608..38706Fucus serratus maleCDSF-serratus_M_contig1409 37609..38706 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1409.2948.1prot_F-serratus_M_contig1409.2948.1Fucus serratus malepolypeptideF-serratus_M_contig1409 27508..38706 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1409.2948.1

>prot_F-serratus_M_contig1409.2948.1 ID=prot_F-serratus_M_contig1409.2948.1|Name=mRNA_F-serratus_M_contig1409.2948.1|organism=Fucus serratus male|type=polypeptide|length=905bp
MAYTVGRNAFIQRLMAEYKFDRSLRMNTKLCALYGCFEGTEDDAIDYRDV
LCCMMLLRQYKKIREAPRMLFQNLILVFSNEAGTKVLRQNALRVARMGAV
HGDDILETSSRLDRYLAEEAGSRGLKPNFRVLDVIFLMEVIESHPSILAA
FGTQVWQHVPKSWRMGDIFAMQATEALTTMKLERAWRWYATKLSRRVIVG
WKTFKNRSKLTKAHRAAVARVTRRHAVRAWHSRASREARRHRVVTRKRLR
IVFLRRYFKRLVHFTKARKKLSAITFAFSKRGKIVVYGMGLLCRVLKKRL
VRLSLRAWCQTACLMTAWEFAVKLSQTRLRRRTFFSLRDTVRTLVTARRL
EDEAEARASWIAETVKEAERDKKLLAAAAVSEAKATLMRARTAEHRARIE
GERARSAARDASKLARQREVRRRRVYEDCARATRNFEAEWVTKVNDIAEK
EMEMTRSRLRINTVARFRIQKELKILKGKFFAGPTPGTANLERHLSDPAN
AIFAKVANLLFNENKSFHTFFDRFDQEGDGYLSHEEFEAMVSSLDINLSG
EQVRAVIRAIDVDGSGYIDFSEFEAAVQRHEEVCGVAGSPWKMYVSPVHA
IMILHNIETNEEIWDYKATDNDLERVVVDNMIAIDGIAAKKKALQKRQEA
WSRLLRDRAAMMLQRRYHVWTARKKRARLSWKRDLENVKERAISESKACT
QIQCWWRKLRAKWLALRLLQITVEVLFDPGYNDQYYFNHGSGCSSWEVPK
MLTRWHGHDARMPEIAEWVLISRTFGQSYYYNTRSRLQQDDKPPGYMRCF
TCVTQLATRRCKIERRDLCFLCYRQEHLKGDNCWHDWEMSKPHTCGVCRR
RPATLFCSACSGSRNKLGEIEHTNTAVGWHPLCDKCWNRIHAHPEFRHHQ
RIAF*
back to top

mRNA from alignment at F-serratus_M_contig1409:27341..38817-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1409.2948.1 ID=mRNA_F-serratus_M_contig1409.2948.1|Name=mRNA_F-serratus_M_contig1409.2948.1|organism=Fucus serratus male|type=mRNA|length=11477bp|location=Sequence derived from alignment at F-serratus_M_contig1409:27341..38817- (Fucus serratus male)
GAGCGATGTCGTCGTCGGAAGTGGACGGGCGTGCGATTGTTACACAGGGT
CATCAACCAACCAGCTTACCGATTCCACAGCATAACTCGCGCTCTGGAGG
CTACTCCTGGAATGGCATACACCGTGGGTCGGAACGCTTTTATACAAAGA
CTGATGGCGGAGTACAAGTTCGACCGCTCGCTGCGAATGAACACCAAGCT
TTGTGCGCTCTACGGGTGCTTCGAGGGGACTGAGGATGATGCGATCGACT
ATCGTGACGTCCTATGCTGCATGATGCTCCTGCGGCAGTACAAGAAAATT
AGAGAAGCGCCACGCATGCTTTTTCAAAACCTTATACTTGTGTTTTCCAA
CGAAGCGGGTACAAAAGTTCTCAGGCAGAATGCCTTACGAGTGGCAAGGA
TGGGCGCTGTGCATGGAGACGACATTTTGGAGACCAGCTCCCGCTTGGAC
AGATACCTGGCGGAGGAGGCAGGATCGCGGGGCCTGAAACCAAATTTTCG
TGTCTTGGATGTAATTTTCCTTATGGAGGTGATCGAGAGTCACCCATCGA
TCTTAGCCGCATTCGGGACGCAGGTGTGGCAGCATGTGCCGAAATCATGG
AGAATGGGGGATATTTTTGCGATGCAGGCGACGGAAGCTCTTACGACGAT
GAAACTTGAACGCGCGTGGCGCTGGTACGCCACAAAACTCTCACGCCGCG
TAATCGTGGGTTGGAAGACCTTCAAGAACCGATCAAAGCTGACCAAAGCC
CACCGAGCAGCGGTCGCAAGAGTGACGCGGCGACACGCTGTTCGTGCTTG
GCACTCGAGGGCCTCACGAGAAGCTAGAAGGCATCGCGTGGTTACGCGGA
AGCGCCTACGCATTGTATTCCTCCGTCGATACTTTAAGCGACTGGTTCAT
TTCACAAAGGCGCGAAAAAAACTCTCGGCGATAACTTTCGCGTTCAGCAA
ACGGGGGAAGATTGTGGTTTATGGGATGGGACTACTTTGCCGCGTGCTGA
AGAAGCGCCTGGTGCGATTGTCTCTGCGCGCGTGGTGCCAAACGGCTTGT
CTAATGACTGCCTGGGAGTTCGCAGTTAAGTTGTCGCAAACACGGCTACG
CCGCAGGACATTTTTTTCCCTGAGGGATACCGTGAGGACGTTGGTGACGG
CGAGACGTCTTGAAGATGAGGCGGAAGCCCGCGCGTCATGGATCGCCGAG
ACAGTCAAGGTGGTGTACAAGTCGGTTGCAATATTTTCTGTAAGCGTGGT
GATTGTCTCTGGGAGACAGACACACCCCCGCACGTTCACTCCTCAAAAAT
CCGAAACTAAAACGGGTGCGTTTCGAGACTCGAGGGGTCCCCCGCGACCC
TACACTTGTACTGTACCTGGTATCCTGGTATTCTGATAGCTGCCTGGTAC
TACTTTTTTGGAGGTTTTGTACAATACCGAGGCGTTTAAATAATATAATT
TTGTTCGGGCGCTCTTAGCATAAAGGCAGCATCGTCGACCGCCTTCGAAA
CTTCGGGACGTTCATGTTCCAAAACGCAGGAAGCAGAGAGAGACAAGAAG
CTGCTCGCCGCCGCTGCGGTGTCCGAAGCCAAGGCGACCCTGATGAGGGC
GCGTACGGCGGAACATCGAGCACGCATTGAGGGAGAGCGGGCCAGGTCTG
CAGCGCGAGACGCGAGCAAATTGGCGCGGCAGAGGGAAGTGAGGCGACGG
AGGGTGTACGAGGATTGCGCACGGGCCACGAGGAACTTTGAAGCCGAGTG
GGTTACTAAGGTCAACGACATTGCCGAGAAAGAGATGGAGATGACGAGAA
GTCGTCTCCGAATAAACACAGTGGCCCGTTTCCGCATCCAAAAGGAGCTG
AAGATCCTCAAGGGAAAGTTTTTTGCCGGACCTACCCCGGGAACCGCGAA
CCTCGAGCGTCACCTAAGTGATCCGGCCAACGCCATCTTCGCCAAAGTGG
CGAACCTACTCTTCAACGAAAACAAGTCGTTCCACACATTTTTCGACCGT
TTCGATCAAGAGGTGGGGCTGTCGTGAGAAGGGCTGGTTTGTGATCTAGG
ACGGGGGCGAGGTACTCTTCGGGGCACGAATTCCGCTATATTTATATCAA
TATTATAGTAGAATTGGCTAATGTACAAACTACAACCAATTATTTCGCAG
CATCGCCCGAACGTCAATACTATATTGGGTAAACAGAGAAAGGCAGGGCG
AATTCAAACCGAAGCAAAAACTACAATTTTTCTTCTTTTTTTTTAACTGC
GAGGTTAACCGTCGGCCAAAGCTGCATTTTTTTTTTTACTGCGGGGTTAA
CTGTCGACCTCTTCGCGCGTGTAACCTCGACTCTCTTGACTCCCGTTCTA
TAAGGGCGACGGTTATCTTTCTCACGAAGAGTTCGAGGCAATGGTGTCCA
GCCTCGATATCAATCTGTCCGGGGAACAAGTCCGAGCGGTGATCCGAGCG
ATCGATGTCGACGGTAGCGGGTACATCGATTTCTCAGAGTTCGAGGCGGC
GGTGCAGCGACACGAGGAAGTGAGACCCGAGAAACCCTACACTTGCTTCG
GGCCACAATGCCACCATGCGACGAAAAAAAACTCGTTCGATACACCGCAA
CTTTGTTTTGTATCCCATAATTATTGGACCCTATCGACAACAGACACGGG
ATTGCTATTTTTCCTCTCAGAGTTGACTATAATAACGGCATATTTTCATA
ACTAGGCAGTATCACCCCAGTTTTCCACCCGTCTCCCTCTGTTCGAGAAA
ACTCCAGCGTCGAACGGTACGAACACGGCACAGGTGTGCGGAGTGGCTGG
ATCACCTTGGAAGATGTACGTCTCGCCCGTGCACGCGATCATGATACTTC
ACAACATCGAGACTAACGAGGAGATATGGGACTACAAGGCCACCGATAAC
GACCTGGAACGAGTGGTCGTAGATAACATGATAGCGATCGATGGCATTGC
CGCTAAGAAAAAGGCTCTCCAGAAGCGACAAGAAGCTTGGTCAAGGCTTC
TCAGGGACAGGTGCGTGCGCCCGTGCACGAGAGCGTTTTACCTCGCCTCC
CGGTTGTTCCTCGGAGGAAAGAGAAGAGAGAGTTCCTATCGAATACCCAC
ACACCAGCAAAGCGTTAACACCGGTGCAGAGTCAGTCAGGCATGATTAGC
GCCCTCGGAGTGAGATCGGAGGCTAAATCGAACTCCCTCTATTTCAGCTT
CATTGTTGTAGAACTCCCTCTATTCCCGCTCCAGCTACAGATTCAGTGTG
TGCCAGGTGTTTATTATACTCAGTGGTAACGTGCTATGATGAGGCTGAGG
CTCTTTATTATTACCGCGTCTCGGCCCTTCCTTGGTGGGAGGAGCGGAGA
GAGTACCTCGCGGGGTCCATTTAGCCGAAACCCTACAGTCTTTACGAAAC
GAGCATCCAACGATCGTGCACCCCTTGCCCGCGTCTTCAATATCAGAATT
GGCGGCGGGTGTTCAGTAGATGGGTGATAACTCATGAGACAGATGTGGCA
GATGTTTTATCTCGGCGCGTTTGCGTAGTCTGCTTATGGGAGTGTTGGGA
GTGTTTTTTCACATTAACCGATTGGGCCTCAACCATACTCAGAAATATAA
GCGGTTGCCAATCAGGTGCGTGATGTGTTGGACAGGATCAGACAAGAGGT
AAAGCCACAAAGGTTCAAGGAAAGCAGAAAACTAAAAGCTAGCGAGAGGG
AATAAAAAAAACGACAACAGTCTAATATTTTAAAACAGGAAAGACAAAGC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAGATGCGTTCTATACAAGC
GTATGCGCACGCGCAACAGAGACGCCCGATTCGAGGCTGCACCACTCCCT
CGGTGACGCCAGTTTAGTCACATTCATGCTGCAGCGAATTTCAATTTATG
ATGGTTAGCCTGCTTCGCACGTCTCTGTGACCTACCCCTTCACTTCACCC
TTGATCAACAGAGCAGCCATGATGCTACAACGGCGTTACCACGTCTGGAC
GGCGCGAAAGAAGCGAGCTCGTCTGTCTTGGAAGCGAGATCTTGAAAACG
TCAAGGAGAGAGCCATCTCAGAATCCAAAGCCTGCACGCAAATCCAGTGC
TGGTGGAGAAAGTTGCGAGCCAAGTGGCTTGCCCTGCGCCTCTTGCAGAT
AACGGTCGAGGTGCTGTTCGACCCGGGCTATAACGATCAATATTACTTTA
ACCACGGGTCAGGGTGTTCGTCTTGGGAGGTGCCGAAAATGCTGACGCGC
TGGCACGGCCACGACGCACGGATGCCGGAAATAGCGGAATGGGTACTCAT
ATCAAGGACATTCGGTCAGGTATGATGGATGGAAATGCAGCTTGATAGAA
GTAATAGTGTAAGCCAATATATATATACATATGTATATCATTAGTGGATA
TGGGGAAAAAGGGGGGGTGTACACTATTTGGTCCCCGGGTTTACCTGAAT
AGGCAGCATCCAACCCGTCACTCGAACTACTTTGAGGACTTCTAGCCGTT
TGTCGGCGGACTCTCGGCAGTGAACACCGTCGGTACGCATAAATATATGT
ACGCCGCCACGGAAAGCGGCAGATATCTCGCGAGTAAGCACCAGATTCAA
ACTGGGGGGGGAGAATGAGCGGGTTGACGTGGGACGGGCGACTAAACCCG
TCTCATGAGATCAAATTCCCAGGCACGATCGGGGACAGGAAAATATATTT
CCCCCTGTTCAGCTTATCACGAGCGAGCACAGAACCGGCGACCACATCGG
TTGATGCCCAGTCTGCTGTCTGCGATGACCATACATGCATTCAAACATGC
ATGATTAATACTTGTTGCTCTAGTGAAGTAGCAGATGACTTACGGCCGAA
AGATCTCAACGTGCTAGGTTGCCAATCCCACCTACTAATACTGCAACGCT
TCCATCCTACCTGTTACCACTAAGGAGGATATTTTCTTTTTATCGCGATG
CTGTTTATGTCAATATGAATGTTAATGTTAACGTTAATGTGTAATAGTTC
AGCCCTTTTATTTTCCCTATGTATTTGTACGATGTGTGGCCTTGAGAAAC
TTGGGCTTGTTGATCAAGACTGATTTGAGCGTGGTTTGTCCGCTTTGTGG
CTAAGAACGCTGGTCGTGGGTAGGCGACAACAATCCGAGTCGATCGAGGA
TGCGACCTGATGACGGCGTCTGTTCGGATTGGTCCGAGGTGGAGCAAGGA
CTACGGCAAGGATGCGTACCATCTCCGCCGTTGTTCAGCATCTTTTTCGC
AGCCGTGCTGACCGTTGTCCTCCAAAGATTCAGCGAGGATGCAGTCATCC
TTGCCGAGCTGGTGCACCTGAAGGAATCGCCGACGTCGATGGGGACCGGA
GCCGGCAATGGACTACGCTCGTCGTGCGGTGTGGGGCATGCTGTACGCAG
ATGACGCCTGCGTAGTTTTGCGATCGCTGCAGGGGCTGGCTAAGATGATG
GAAGTTGTCGTAGAGGTTCGCCGAGCCTTCGCGATAACCGTGTCGGCGAA
GAAGACAGAGACCACGTGCATGCCTCCACCGCGTGCACCGCGGACGATGG
TGTGAGTCGAAGCGGTCGGGCAAACCTACAAACAGGTGCAATCCTTCACC
TAACTAGGGGGCGCCGTGACCGAAACCCCGAACATGTCCGTTGAAATCGC
CAGGTGGACCCGCGCTTGCTGGATGCGCATCAGGCGGTACCTACGTTAGC
TCTACGACCAACCGAACGTAGCGCTCCCCCTCAAGACCCGAATGGTAAAG
GCCGAAGCAATCGAGACCCTCCTGTATGGATGCAGTACGTGGACCCTTTG
CCAGGAACACTACGCCAAACTCCGCACCGTACACCACCGGGTCTTGCTTC
ATATCATGGGGGCACAGCGTAAGAGACAATGCCATCGGATGACCACGTAC
AACCGTGCCCTTGAGATAACCCGGCGTGTGAGCATTGAGACAACGTTGCG
AACGAGAATACTTTTGTGGGAAGGGACGCTCATCCGAATGAGCGGCGGGC
GGCTGCCAAATCGAATCGTGGTCGGAACCCTTGAGGGTGCAGAACGGAGA
GGACGGAGTGGGGCGGAGAAAGAGTGGGCCGATTGCGTACAGAGCGACAT
CCGGGCGTTTGGCATAGCGGGGAATTGGAAAGCGACGGCGTCAAATGTTA
AGGTGTGGATTGAGAAGGTCACGGAGGGTGGGCGGAGGTTCATGGCCGCG
TGGAGGCAATGAGAGGAAGACGTGGCTAGACATCGCCAGGAGAAGATAGA
GGTAACAAGACTGGGAAAATCGTTATCGCACACGGAAGCGTATAATTTTG
ATGAAGCGACGCCCTTTGGCCTAATCGACGAGTCGAAGGGATCCTTGTAC
GGACGCGGGACCGATCGAGATCTGCGTAGCGCCTGTAGATTCGTCACGTT
ATTTTTTATTTCCTCCGAACGAGGGGCGTAGGGGGGGGGGGAATGTGCTA
TCAGACTTATTATTTTGTTCTCTTTTCCCTGTTCAGCAGACCACCATTCT
ATCAACATGCCTACTTCATACCAATAATAGTATAGTGGGTGTGGGAAAAG
AGAGACGTACATTAATTGGTCATAGTCCATGGTGACCTGCAAAATGGCAG
CACCCCTTACTGGAACTACCTTGAGGACTACTGGCCCTGTGCCGGCGGAC
TCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATGAACTCG
GGACTGACTCGATGGCATATGGCGGTTTAAATGAACAAATGGACGCCGCC
GCGGAAATCGGGAGGAATCCCGTAAGTAAGCACCAGGCTCAGCCTGAGTA
TGGAGAATGAACAGGCTGACGCGGGACGGGACGGCTGAACCCGTCTCGCA
AGACCAAATTTTCAGGCGCGTATGGGGACAGGGAATATTGATGTTTCCCT
GTTCAGCTGACCACGAGCAAGATTGGCAAGCTTACCCGGTTGATCCATAC
TCTGCTAAACGTGATGACCATACATATGAACTATTATAGCGGGATTGGCC
ACCCTGTAAAGTAGTTTTTCGGGCTGGCAACCAATACGCTGAATGCGAGA
AACAACAGCTCTCGATGTGGAGATTGCAGCGTGATTTGTCCGCTTTGTTG
CTGAGAACACTGGCCGTGGGTAGGCGAAAACAACCCGAGTCGATCGAGGT
TGCTCTCGATATGGAGTAAGGAGGTTTGGTGAACCGTTTTGACTTTGGTC
GGTGCCATTGCTTGTACAGTATCGCATAACTTGTCTTCGTCGTGTAAACC
TCCGATAGACCTCGAAATATGTTTTCATTCGCTTTTGACCTTGTTAGAGG
GGCAGCACGCATCAGGCATCATCTTCTCTGCAGCTTGTACTTCAGCTTCT
AAAATACTGGCAGCACTCCAGACAGAAGAGACTGTAGTTCGTACCCCAAA
AAATTGTCTTGACGCCGATAACTTTACGATCTTGTCGGTTGGTTGGACCT
GGCAAGGATTTTTGTTGCGATTTGGATCCCTGTTGATTTTCGTAGCGGGT
TGTCACCATGATGTGGCCCGTGGAACCACAAATGCCTCTTTTTCGTACCT
GTTCGTGACCACGAGCGGGATTGACGTTTGATAGGTCATAGTCTATGGCT
AACTTGTTGTGTTGCCGTAGTTTTTTGTTTTTTCAGTTGCAAGGACAAAA
CGCTGACCGTGTGACTCAACAACACCTCTACTACCATCGGGGAACCCGTT
TAAATCCCATAAAGATGTTTTGTATTTGCAGCCTATGATCCCACCTACAA
GTAAAGGTTTTGACATTTTTCCCCGTGACTGGGGTATGATGTATGATGAT
GTAATGTTCAGAAGGTCTAGATGCGTTCATATTTTTCTTTTTAACACCTC
GTCAACCAGGTTGAAATTTACTTACTCACGTTCTCACGCTTTCCTTTCCG
CTACTAGAAACATTACTACGGAAACCAGAACAAAAATGATGTTTAAAGTC
CGTAGTACTGCAGTTTTATTCTGGACTCCGTAGCGGAGAGCGTGAGTGTG
TTGTGTTGTGTTTTCTTCCCATCCATTCTGGACATCAATGGATGTACCAG
CCGGGGTCGCACAGGAGGAAGGTCACACAGGATTTCTCATCCACCTTCCT
TCTGCGGTGCGTGCCTTAATTTTTATCGCGAGAAGGATTCACCCATTCCT
TTCCCTCGTCGACCGTGAAGTCGAAGTTTGTGTACTAACGAATTAATCGT
TCTCCACCCCTTGGGCATTTTTATTTTTGTTTTTTGTTTTTAGTGAGAAA
AATCCCGTTTGCCGGGATCGAATTCACGTCCCAACGTGTCAGAGGGTTAC
GACGTACCTCTGAGCTACCGGGGCGACTCTCGTTCTTACAAAATGTCATG
TATTTTCCACCAGACTATCAATGTAGCATACACCTTACTCCTGCTTTCAT
AGATATACACTTGAAGTATCAGTTTCTATGGACCTGTCGTAAGTTTTAGG
TCTTTCATGTCTTGTATGACTTGTAGATTTCCTTCATCGAAATAATAACA
AACAAACCTTATTAATAGTACTCCCGAGTACTAAGATCAGCTACGTTCGT
GATCTTTACATTTTCGATGACCATATTTCTGTAGTCCTGAACTCTTAGTC
CAAGTATATAGTATAAGAAATAGACTCGTCGGATGACCTCCTGCAACCGT
AACCTCGAGACAACCCGGTGTGAGAACATCGAGATAACGTTGCGCACAAG
AATATTTATGTGGGCGGGAGCGCTCATCACAATGGGCGGCGGGCGGCTGC
CAATGCGAACCGCGTTCGGAAACCTTGAGGGTGCAGTACGGGGAGGACGG
GGTGGGAAGGAGAAAGAGTGGGGCGATTGCTTACCGCCGGTACTTCCTAC
ATGCTATAACTATTAATATAACCACTTCATACCAATATTAGTATAGAGGG
TGTGGGAACGAGAGGCGCATATTAATTTTCGATGACCATATTTCTGTAGT
CCTGAACTCTTAGTCCAAGTATATAGTATAAGAAATAGACTCGTCGGATG
ACCTCCTGCAACCGTAACCTCGAGACAACCCGGTGTGAGAACATCGAGAT
AACGTTGCGCACAAGAATATTTATGTGGGCGGGAGCGCTCATCACAATGG
GCGGCGGGCGGCTGCCGAAGCGAACCGCGTTCGGAAACCTTGAGGGTGCA
GTACGGGGAGGACGGGGTGGGAAGGAGAAAGAGTGGGGCGATTGCTTACC
GCCGGTACTTCCTACATGCTATAACTATTAATATAACCACTTCATACCAA
TATTAGTATATAGGGTGTGGGAACGAGAGGCGCATATTAATTGGTCATAG
TCCAAAGTGAAACCTGAAAAGGCAGCACCCGTTACTCGAACTACCTTGAG
GACTACTGGCCCTGTGCAGGCGTAATCTCGGCGGTGAACGCCATCGGTAG
GCAATTACGTGACCCGATGAACTCGGGACTTATCCGATGGCGTATGGCGG
TTTTAAATTAATAAATGGACGCCGTCGCGGAAATCGGGAGGAATCCCGTA
AGTAAGCACCATGTTCAGTCTGAGTATGCAGATGATCAGGGTGACGCTGG
ACGGGACTGCCGAACCCGTCTCGCGAGACTAAATTTTCAGGCACGAACGC
AGACATGGAAATATTCATTTTCCAGCTGACCACTTGCAGGATTGGCAACC
TTGCCCGGTTGATTCATACTCTTGCTATATGTCTGATAATATATACATAC
AGAGCGACATCCGGGCGTTTGGCATATAGTGGGGGACTGGAAATCGACGG
CGTTAGAGGCTGAGGTGTGGGTCGAGACGGTCATGGAGGGTGGGCGGAGA
TTCATGGCCACGAGGAGGAAAGAAGTGGTGGATGCGGCTAGATATCTCCA
GGAGAAGACAGAGGCAACGAGACCGAGAAAATTGTTATCGCACACGGAAG
CGTAGAATTTTGCGAAGCGACACCCATGGGTGGCCTAGTCGACGAGCCGA
AGAACCTGTAAGAGCGCGAGACGGACCGAGACCTGCGTAGCCCCTAGGCA
TGTAAATTATATATATGCATATTTACGTAACGTGATTTTCATTTCATTTT
TTTCGAACGAGCAGCGTGGGGGGGAGGGAGGGGCGCTGCCAGACTTTCTC
TTTTTGTTCTCGAGTTTTTGTCCTTCCCGCGGGAAAAATAAACCTTCTCA
CCCCGACATTAGAATTGTACTGTTCACCCATATGCCACACACTATCCTAA
ACCTTGTTGACATTTTTTTCCCCAATACAAGGATGATGATGATGATGTCC
AGGAGTTCTAGATGCGTTCAACTTTTTCTTTAATTACATTTTATCATATA
CAGGTCAGGTGTAGTGTTAAATTGTTGTATTTGCAGCATGGCGACAAAGA
TCCGTATTTGGATCCCTGTTGGTCTGAGTAGCGGGTTGTCACCATGATGT
GATCCGTATTTGGATCCGTATTTGGATCGGTTAATGTGAAGAATACAACA
ACAACAACACTCTAGGTGCGTTCTGTATTTTCTTCAAACAACAACTGGTA
GGAGAGAACCGCAGAGAAAGAAATGACAAGATCCCACTGGCAAGATGGCA
ACTCTGCGAGTGATTATTTATTATTTGACACCTATGTGGAATTATGTTGT
TGGGTTCCTCACGTTAACCGGTCGGGCCTCAACCATACTAATACTCAGTA
ATATACGTTAAGGATGGTCTGATGGACAGGGAAAAGATCGGAGGAACCTC
TACAAAGCTCCACAACGGGGGCATGAAAACAAAACGAAACAGAACCAACG
CAAACACGACAAAAGATAGAACCAGTTGGTAACCCAGAATGTAGAGGCCC
ATCGGTGAAGAAGTGTAAACACTCGACTGCGTCGTCGCTAGCGATGCCAA
AATATGAAAATGACGGGACGGGTTGTGTGTTGCCTCCCTTCCCGTGCGCG
CGGCCTTTTGACTTTCTGCTTCACAGTCCTACTACTACAATACCCGCAGC
CGTCTGCAGCAAGATGACAAGCCTCCCGGTTATATGAGATGCTTTACCTG
TGTCACACAGCTGGCCACACGCCGTTGCAAAATAGAACGGCGCGATCTGT
GTTTTTTATGCTATCGTCAAGAGCACTTGAAGGGAGATAATTGCTGGCAT
GACTGGGAGATGTCCAAGCCTCATACCTGTGGCGTATGCAGACGACGACC
CGCAACATTGTTCTGTTCTGCCTGCAGCGGCAGCCGTAACAAACTGGGTG
AGATTGAACATACTAATACGGCTGTAGGATGGCACCCTCTATGCGATAAG
TGTTGGAATAGGATCCATGCGCATCCGGAATTTAGACATCATCAACGCAT
TGCCTTCTGAGCATTGAGAGAATCGGAATGGGCTGGATCGAGGCACATGC
ACCGTCCAGGCCGTGTTAGTAGATTAAGCGAGCTAGCAAAGTGAGAGGGG
TGGGGGTAGCCCTGAGCTCTACTTGGGTGTGCTGGTGCTGAAGAATTGGA
TTATGAAAAAACAAAGTGATATTATTA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1409:27341..38817-

>mRNA_F-serratus_M_contig1409.2948.1 ID=mRNA_F-serratus_M_contig1409.2948.1|Name=mRNA_F-serratus_M_contig1409.2948.1|organism=Fucus serratus male|type=CDS|length=5430bp|location=Sequence derived from alignment at F-serratus_M_contig1409:27341..38817- (Fucus serratus male)
ATGGCATACACCGTGGGTCGGAACGCTTTTATACAAAGACTGATGGCGGA
GTACAAGTTCGACCGCTCGCTGCGAATGAACACCAAGCTTTGTGCGCTCT
ACGGGTGCTTCGAGGGGACTGAGGATGATGCGATCGACTATCGTGACGTC
CTATGCTGCATGATGCTCCTGCGGCAGTACAAGAAAATTAGAGAAGCGCC
ACGCATGCTTTTTCAAAACCTTATACTTGTGTTTTCCAACGAAGCGGGTA
CAAAAGTTCTCAGGCAGAATGCCTTACGAGTGGCAAGGATGGGCGCTGTG
CATGGAGACGACATTTTGGAGACCAGCTCCCGCTTGGACAGATACCTGGC
GGAGGAGGCAGGATCGCGGGGCCTGAAACCAAATTTTCGTGTCTTGGATG
TAATTTTCCTTATGGAGGTGATCGAGAGTCACCCATCGATCTTAGCCGCA
TTCGGGACGCAGGTGTGGCAGCATGTGCCGAAATCATGGAGAATGGGGGA
TATTTTTGCGATGCAGGCGACGGAAGCTCTTACGACGATGAAACTTGAAC
GCGCGTGGCGCTGGTACGCCACAAAACTCTCACGCCGCGTAATCGTGGGT
TGGAAGACCTTCAAGAACCGATCAAAGCTGACCAAAGCCCACCGAGCAGC
GGTCGCAAGAGTGACGCGGCGACACGCTGTTCGTGCTTGGCACTCGAGGG
CCTCACGAGAAGCTAGAAGGCATCGCGTGGTTACGCGGAAGCGCCTACGC
ATTGTATTCCTCCGTCGATACTTTAAGCGACTGGTTCATTTCACAAAGGC
GCGAAAAAAACTCTCGGCGATAACTTTCGCGTTCAGCAAACGGGGGAAGA
TTGTGGTTTATGGGATGGGACTACTTTGCCGCGTGCTGAAGAAGCGCCTG
GTGCGATTGTCTCTGCGCGCGTGGTGCCAAACGGCTTGTCTAATGACTGC
CTGGGAGTTCGCAGTTAAGTTGTCGCAAACACGGCTACGCCGCAGGACAT
TTTTTTCCCTGAGGGATACCGTGAGGACGTTGGTGACGGCGAGACGTCTT
GAAGATGAGGCGGAAGCCCGCGCGTCATGGATCGCCGAGACAGTCAAGAT
GGCATACACCGTGGGTCGGAACGCTTTTATACAAAGACTGATGGCGGAGT
ACAAGTTCGACCGCTCGCTGCGAATGAACACCAAGCTTTGTGCGCTCTAC
GGGTGCTTCGAGGGGACTGAGGATGATGCGATCGACTATCGTGACGTCCT
ATGCTGCATGATGCTCCTGCGGCAGTACAAGAAAATTAGAGAAGCGCCAC
GCATGCTTTTTCAAAACCTTATACTTGTGTTTTCCAACGAAGCGGGTACA
AAAGTTCTCAGGCAGAATGCCTTACGAGTGGCAAGGATGGGCGCTGTGCA
TGGAGACGACATTTTGGAGACCAGCTCCCGCTTGGACAGATACCTGGCGG
AGGAGGCAGGATCGCGGGGCCTGAAACCAAATTTTCGTGTCTTGGATGTA
ATTTTCCTTATGGAGGTGATCGAGAGTCACCCATCGATCTTAGCCGCATT
CGGGACGCAGGTGTGGCAGCATGTGCCGAAATCATGGAGAATGGGGGATA
TTTTTGCGATGCAGGCGACGGAAGCTCTTACGACGATGAAACTTGAACGC
GCGTGGCGCTGGTACGCCACAAAACTCTCACGCCGCGTAATCGTGGGTTG
GAAGACCTTCAAGAACCGATCAAAGCTGACCAAAGCCCACCGAGCAGCGG
TCGCAAGAGTGACGCGGCGACACGCTGTTCGTGCTTGGCACTCGAGGGCC
TCACGAGAAGCTAGAAGGCATCGCGTGGTTACGCGGAAGCGCCTACGCAT
TGTATTCCTCCGTCGATACTTTAAGCGACTGGTTCATTTCACAAAGGCGC
GAAAAAAACTCTCGGCGATAACTTTCGCGTTCAGCAAACGGGGGAAGATT
GTGGTTTATGGGATGGGACTACTTTGCCGCGTGCTGAAGAAGCGCCTGGT
GCGATTGTCTCTGCGCGCGTGGTGCCAAACGGCTTGTCTAATGACTGCCT
GGGAGTTCGCAGTTAAGTTGTCGCAAACACGGCTACGCCGCAGGACATTT
TTTTCCCTGAGGGATACCGTGAGGACGTTGGTGACGGCGAGACGTCTTGA
AGATGAGGCGGAAGCCCGCGCGTCATGGATCGCCGAGACAGTCAAGGAAG
CAGAGAGAGACAAGAAGCTGCTCGCCGCCGCTGCGGTGTCCGAAGCCAAG
GCGACCCTGATGAGGGCGCGTACGGCGGAACATCGAGCACGCATTGAGGG
AGAGCGGGCCAGGTCTGCAGCGCGAGACGCGAGCAAATTGGCGCGGCAGA
GGGAAGTGAGGCGACGGAGGGTGTACGAGGATTGCGCACGGGCCACGAGG
AACTTTGAAGCCGAGTGGGTTACTAAGGTCAACGACATTGCCGAGAAAGA
GATGGAGATGACGAGAAGTCGTCTCCGAATAAACACAGTGGCCCGTTTCC
GCATCCAAAAGGAGCTGAAGATCCTCAAGGGAAAGTTTTTTGCCGGACCT
ACCCCGGGAACCGCGAACCTCGAGCGTCACCTAAGTGATCCGGCCAACGC
CATCTTCGCCAAAGTGGCGAACCTACTCTTCAACGAAAACAAGTCGTTCC
ACACATTTTTCGACCGTTTCGATCAAGAGGAAGCAGAGAGAGACAAGAAG
CTGCTCGCCGCCGCTGCGGTGTCCGAAGCCAAGGCGACCCTGATGAGGGC
GCGTACGGCGGAACATCGAGCACGCATTGAGGGAGAGCGGGCCAGGTCTG
CAGCGCGAGACGCGAGCAAATTGGCGCGGCAGAGGGAAGTGAGGCGACGG
AGGGTGTACGAGGATTGCGCACGGGCCACGAGGAACTTTGAAGCCGAGTG
GGTTACTAAGGTCAACGACATTGCCGAGAAAGAGATGGAGATGACGAGAA
GTCGTCTCCGAATAAACACAGTGGCCCGTTTCCGCATCCAAAAGGAGCTG
AAGATCCTCAAGGGAAAGTTTTTTGCCGGACCTACCCCGGGAACCGCGAA
CCTCGAGCGTCACCTAAGTGATCCGGCCAACGCCATCTTCGCCAAAGTGG
CGAACCTACTCTTCAACGAAAACAAGTCGTTCCACACATTTTTCGACCGT
TTCGATCAAGAGGGCGACGGTTATCTTTCTCACGAAGAGTTCGAGGCAAT
GGTGTCCAGCCTCGATATCAATCTGTCCGGGGAACAAGTCCGAGCGGTGA
TCCGAGCGATCGATGTCGACGGTAGCGGGTACATCGATTTCTCAGAGTTC
GAGGCGGCGGTGCAGCGACACGAGGAAGGCGACGGTTATCTTTCTCACGA
AGAGTTCGAGGCAATGGTGTCCAGCCTCGATATCAATCTGTCCGGGGAAC
AAGTCCGAGCGGTGATCCGAGCGATCGATGTCGACGGTAGCGGGTACATC
GATTTCTCAGAGTTCGAGGCGGCGGTGCAGCGACACGAGGAAGTGTGCGG
AGTGGCTGGATCACCTTGGAAGATGTACGTCTCGCCCGTGCACGCGATCA
TGATACTTCACAACATCGAGACTAACGAGGAGATATGGGACTACAAGGCC
ACCGATAACGACCTGGAACGAGTGGTCGTAGATAACATGATAGCGATCGA
TGGCATTGCCGCTAAGAAAAAGGCTCTCCAGAAGCGACAAGAAGCTTGGT
CAAGGCTTCTCAGGGACAGGTGTGCGGAGTGGCTGGATCACCTTGGAAGA
TGTACGTCTCGCCCGTGCACGCGATCATGATACTTCACAACATCGAGACT
AACGAGGAGATATGGGACTACAAGGCCACCGATAACGACCTGGAACGAGT
GGTCGTAGATAACATGATAGCGATCGATGGCATTGCCGCTAAGAAAAAGG
CTCTCCAGAAGCGACAAGAAGCTTGGTCAAGGCTTCTCAGGGACAGAGCA
GCCATGATGCTACAACGGCGTTACCACGTCTGGACGGCGCGAAAGAAGCG
AGCTCGTCTGTCTTGGAAGCGAGATCTTGAAAACGTCAAGGAGAGAGCCA
TCTCAGAATCCAAAGCCTGCACGCAAATCCAGTGCTGGTGGAGAAAGTTG
CGAGCCAAGTGGCTTGCCCTGCGCCTCTTGCAGATAACGGTCGAGGTGCT
GTTCGACCCGGGCTATAACGATCAATATTACTTTAACCACGGGTCAGGGT
GTTCGTCTTGGGAGGTGCCGAAAATGCTGACGCGCTGGCACGGCCACGAC
GCACGGATGCCGGAAATAGCGGAATGGGTACTCATATCAAGGACATTCGG
TCAGAGCAGCCATGATGCTACAACGGCGTTACCACGTCTGGACGGCGCGA
AAGAAGCGAGCTCGTCTGTCTTGGAAGCGAGATCTTGAAAACGTCAAGGA
GAGAGCCATCTCAGAATCCAAAGCCTGCACGCAAATCCAGTGCTGGTGGA
GAAAGTTGCGAGCCAAGTGGCTTGCCCTGCGCCTCTTGCAGATAACGGTC
GAGGTGCTGTTCGACCCGGGCTATAACGATCAATATTACTTTAACCACGG
GTCAGGGTGTTCGTCTTGGGAGGTGCCGAAAATGCTGACGCGCTGGCACG
GCCACGACGCACGGATGCCGGAAATAGCGGAATGGGTACTCATATCAAGG
ACATTCGGTCAGTCCTACTACTACAATACCCGCAGCCGTCTGCAGCAAGA
TGACAAGCCTCCCGGTTATATGAGATGCTTTACCTGTGTCACACAGCTGG
CCACACGCCGTTGCAAAATAGAACGGCGCGATCTGTGTTTTTTATGCTAT
CGTCAAGAGCACTTGAAGGGAGATAATTGCTGGCATGACTGGGAGATGTC
CAAGCCTCATACCTGTGGCGTATGCAGACGACGACCCGCAACATTGTTCT
GTTCTGCCTGCAGCGGCAGCCGTAACAAACTGGGTGAGATTGAACATACT
AATACGGCTGTAGGATGGCACCCTCTATGCGATAAGTGTTGGAATAGGAT
CCATGCGCATCCGGAATTTAGACATCATCAACGCATTGCCTTCTGATCCT
ACTACTACAATACCCGCAGCCGTCTGCAGCAAGATGACAAGCCTCCCGGT
TATATGAGATGCTTTACCTGTGTCACACAGCTGGCCACACGCCGTTGCAA
AATAGAACGGCGCGATCTGTGTTTTTTATGCTATCGTCAAGAGCACTTGA
AGGGAGATAATTGCTGGCATGACTGGGAGATGTCCAAGCCTCATACCTGT
GGCGTATGCAGACGACGACCCGCAACATTGTTCTGTTCTGCCTGCAGCGG
CAGCCGTAACAAACTGGGTGAGATTGAACATACTAATACGGCTGTAGGAT
GGCACCCTCTATGCGATAAGTGTTGGAATAGGATCCATGCGCATCCGGAA
TTTAGACATCATCAACGCATTGCCTTCTGA
back to top