mRNA_F-serratus_M_contig1407.2928.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: D8LDP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP0_ECTSI) HSP 1 Score: 190 bits (482), Expect = 5.390e-56 Identity = 105/203 (51.72%), Postives = 117/203 (57.64%), Query Frame = 1
Query: 28 EIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFRKEPKVDPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPRIPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFNPNFM 636
+IRDSSNPFFTTTNS IG S + +DAP VFRK PKVD VAA IDW+FMY++ R+PEDKD RD LL F H K+ENPLY+TTNNDIGIK PT TFTFERRARQQGFSNSFNGLKF+DMGLNT+VTRS+IHD NP FM
Sbjct: 4 QIRDSSNPFFTTTNSRIGNSACQKHEYDAPPVFRKVPKVDRVAAGIDWSFMYTRN-------------------------------------------------------------RVPEDKDARDELLKNFKHTSKKENPLYSTTNNDIGIKRPTGATFTFERRARQQGFSNSFNGLKFRDMGLNTNVTRSNIHDDLNPQFM 145
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A6V2SUD9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2SUD9_HETAK) HSP 1 Score: 147 bits (371), Expect = 1.300e-38 Identity = 89/219 (40.64%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFRKEPK----VDPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKH---PIMYEREEDTGIPLRDATCYELQPRIPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFNPNFM 636
MA RGRG LE+R+++NPFF T N+ G + K F+AP V+R + K D D++FMY KES+ IG V S+SKL+ +Q+ GE AR + G + P + E E I D+T + + + L F H PK +NPLYTT+NN G K PT TFT +R +R Q FSNSFNG+ +D GLNT++ +S +H +P F+
Sbjct: 1 MANRGRGTLEVRETNNPFFQTNNNNYGMADFNSKDFEAPPVYRPQQKNQLDEDDDGYNPDFSFMYKKESDNIGGEVQSSESKLSAALKMKQTLGETARMRAAGLNQADPTISE--EHKAIVEADSTLARAGRKTRAEVEEH---LGRFEHAPKAQNPLYTTSNNMYGNKVPTPATFTADRASRIQKFSNSFNGMVHRDQGLNTAIIKSRVHSKLDPQFL 214
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A7S1UKY3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKY3_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.370e-38 Identity = 85/204 (41.67%), Postives = 125/204 (61.27%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERL-KAFDAPTVFRKEPKVDPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPRIPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSI 609
MA RGRG LEIRDS NPFF TT S IG+S + + DAP V R K D++F+Y S +IGKG+ SDSKL++ + + G+ A ++G G +PI ++ + D ++ +++ ++LL+++ H PK E+ LY TT+NDIG+K P+ T+ ER +RQQ FSNSFNG+ ++D GLNTS+ +S I
Sbjct: 1 MAYRGRGTLEIRDSRNPFFHTTTSDIGSSIVKAGREVDAPAVPRPAMKQTLREQGYDFSFLYKPASAEIGKGIGMSDSKLSESMRREEPKGDIAFQRGRGLNPISPG--DEMTLATVDPDGLASMKQVGKEEVNVNSLLNSYRHAPKPEHALYPTTSNDIGLKKPSKATYVLERHSRQQRFSNSFNGILYRDQGLNTSMHKSKI 202
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A8J2SKS3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS3_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.030e-32 Identity = 80/208 (38.46%), Postives = 109/208 (52.40%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFRKEPKVDPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPRIPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFN 624
M+ RGRG L +R S NPFF TT IG + + APTV R P+ + D+ F+Y K S+ IG G Q +P +R G P R + G P AT + R P D + +L + H PK+E+ +Y TT+N IG P TFT ERRAR QGFSNSF G+K+++ GL T+VT+S++HD +
Sbjct: 1 MSCRGRGTLTVRRSDNPFFQTTTGDIGQDFTKEVEYAAPTVERAPPR-RTLVDNYDFGFLYEKMSDDIGAG-------------QHHAPSNLSRAMGAQDTPAQLTRLKTMGAPASAATIAAAESR-PSAADRVERILEIYKHAPKKEHEMYMTTSNVIGALKPNVATFTAERRARNQGFSNSFQGVKYRNQGLTTAVTKSNVHDMID 193
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A7S3M5B3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5B3_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.290e-23 Identity = 70/216 (32.41%), Postives = 111/216 (51.39%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFRKEPKVDPVAAA---ID--WAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPRIPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFNPNF 633
M+ RGRG LE++ S+NPFF TT S IG+ DA ++ + KV P +D +AF+YS+ES++IG V K + ++ + + +REE + + + + K + +L+ + H PK E+P YTT+ +D G K P+ T +R AR Q FS SFN +K ++ L TS+TRS++H + +P F
Sbjct: 29 MSLRGRGLLEVKPSANPFFQTTTSEIGSK------HDASEQWKVDGKVPPFQHGKHNVDGNFAFLYSRESDRIGAKVAKPVMKETKLLTKTEF--------------LKKKREEFAASSAQYEEQFNREESLSPGKRTAENVLAVYKHEPKYEDPRYTTSTSDYGKKPPSVATLVVDRAARPQAFSRSFNNVKPQNTSLTTSITRSNVHSSLDPQF 224
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A482T2A8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2A8_9ARCH) HSP 1 Score: 94.0 bits (232), Expect = 1.330e-18 Identity = 73/238 (30.67%), Postives = 117/238 (49.16%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDA----PTVFRKEPKVDPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPRI-PEDKDFRDALLSTFNHNPKRENPLYTTTN----------------------NDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFNPNF 633
M+ RGRGCLE+R S NPFF + +G ++E + P + KV+ +++F+YS+ES++IG VP + A + S+ + +R REK L + EREE++ + + +P++ PED L + H K E+P Y T+ ++ G KAP+ T +R R QGFS SFN +K K+ L T++T+S++H +P F
Sbjct: 1 MSLRGRGCLEVRPSDNPFFQPVSHDLGRTSEHCPDWKVNGRLPVFNSSQHKVEG-----NFSFLYSRESDKIGGRVPKPEINEAKMLSRTEFLKQR-REKMLSEM-TQEEREENSEMFAHSSA----KPKVNPED------FLKIYKHEAKYEDPRYLTSGVSHTIFEHLFCYFLTLCTFPFQSEYGKKAPSVATIVVDRAVRPQGFSKSFNNVKPKNTSLTTALTKSNVHRTLDPQF 221
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A8K1CW28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW28_PYTOL) HSP 1 Score: 84.7 bits (208), Expect = 1.540e-15 Identity = 65/212 (30.66%), Postives = 99/212 (46.70%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFR--KEPKVDPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPR--IPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFN 624
M RG +R SSNPF TT++ +G + + AF AP + ++ V V++ D FMY S+ +G G D + + + EKG K + D P Y L P +P D R + H P+Y T+N DIG++ + V +RR+R F+NSFNG +++D GLNT++T+S I D +
Sbjct: 1 MVSRGSSVHHMRRSSNPFMTTSSGVVGINLQEPVAFSAPRLSNDNQQQSVQSVSSIKD--FMYQTTSQGLGDGFRAQDRSKLSQCMDKLTLRKDVTEKGQVKINAI-----DVVSPYE----YALSPGDVLPPPIDTRSISDARIEH------PMYATSNRDIGVEK-SQVKVELDRRSRPNTFTNSFNGFRYRDFGLNTAITKSRISDQLD 194
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A2D4CFK2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFK2_PYTIN) HSP 1 Score: 83.2 bits (204), Expect = 5.800e-15 Identity = 64/211 (30.33%), Postives = 104/211 (49.29%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFRKEPKVDPVAA---AIDWAFMYSKESEQIGKGVPPSD-SKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPR--IPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHD 615
M RG R SSNPF TT++ +G + + AF+AP + + + + A+ FMY S+ +G+GV S+ SKL+ +R + L K + R + + + + L P +P +D R P+ E+PLY T+ +IG++ V ER++R F+NSFNG +++D GLNT++T+S I D
Sbjct: 1 MVSRGSTVHHTRRSSNPFMTTSSRIVGINLQEPVAFEAPRLLSSDNQQHQGSGSSNALLKDFMYQTTSQALGEGVRASERSKLS----------QRMDKLTLQKKVLEGGRVKIKPVDVAQPHEFALSPEDVVPPAQDTRSIS------EPRNEHPLYATSTREIGVEKA-QVKVEIERKSRPNTFTNSFNGFRYRDFGLNTAITKSRICD 194
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A3F2RIF8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIF8_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.540e-11 Identity = 62/212 (29.25%), Postives = 98/212 (46.23%), Query Frame = 1
Query: 1 MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFRKEPKV--DPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCYELQPR--IPEDKDFRDALLSTFNHNPKRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFN 624
M RG R ++NPF TT++ +G + FDAP + R +V P +A FMY S +G+GV + + + + GL + R D P Y L+P +P+ D + A+ + E+P+Y T+N +IG + + ER+ R F+NSFNG +++D GLNT+VT+S I D +
Sbjct: 1 MVSRGSSIHHTRRTNNPFMTTSSGIMGIDLQEKVTFDAPQL-RNNNQVGNQPRSANALTEFMYQTTSGGLGEGVRAHERLRLSQRMDKLNLHKEIEASGL-----ITIRSVDVAAP----EDYSLRPEEILPKSIDIK-AITEA-----RGEHPMYATSNRNIGAEKA-QLKVEVERQGRPNTFTNSFNGFRYRDFGLNTAVTKSRICDQLD 195
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Match: A0A024TZ32_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ32_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 3.590e-10 Identity = 61/219 (27.85%), Postives = 100/219 (45.66%), Query Frame = 1
Query: 4 AQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAP-----TVFRKEPKVDPVAAAIDWAFMYSKESEQIGKGVPPSDSKLADVTSQRQSPGERAREKGLGKHPIMYEREEDTGIPLRDATCY---ELQPRIPEDKDFRDALLSTFNHNP----KRENPLYTTTNNDIGIKAPTSVTFTFERRARQQGFSNSFNGLKFKDMGLNTSVTRSSIHDAFN 624
A RG +R + NPFFTT++ +G + F AP T+ R A + FMY + IG+G+ +S + +QR + K + E E+ + +R E+ R D +D + + P + E+P+YTT+ +G + ++ T ER + F+NSFNG +++D GLNT+VT+S I DA +
Sbjct: 4 ASRGSRVHHVRKTPNPFFTTSSGIVGINLHEPTEFLAPKLDDHTLARPTDNNQSEEAKL-VKFMYQTTTSSIGEGIERRESPM----TQR-----------MDKFAVKREIEQSGLVKVRSVNVISPEEVLARAKADLLSQDTTKNAVDIKPIAAPRGEHPMYTTSTRVVGEEKG-AIQVTTERIVKPGTFTNSFNGFRYRDYGLNTAVTKSKICDALD 205 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1407.2928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1407.2928.1 >prot_F-serratus_M_contig1407.2928.1 ID=prot_F-serratus_M_contig1407.2928.1|Name=mRNA_F-serratus_M_contig1407.2928.1|organism=Fucus serratus male|type=polypeptide|length=213bp MAQRGRGCLEIRDSSNPFFTTTNSAIGTSTERLKAFDAPTVFRKEPKVDPback to top mRNA from alignment at F-serratus_M_contig1407:15044..18433+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1407.2928.1 ID=mRNA_F-serratus_M_contig1407.2928.1|Name=mRNA_F-serratus_M_contig1407.2928.1|organism=Fucus serratus male|type=mRNA|length=3390bp|location=Sequence derived from alignment at F-serratus_M_contig1407:15044..18433+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1407:15044..18433+ >mRNA_F-serratus_M_contig1407.2928.1 ID=mRNA_F-serratus_M_contig1407.2928.1|Name=mRNA_F-serratus_M_contig1407.2928.1|organism=Fucus serratus male|type=CDS|length=1278bp|location=Sequence derived from alignment at F-serratus_M_contig1407:15044..18433+ (Fucus serratus male)back to top |