mRNA_F-serratus_M_contig1404.2924.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 255 bits (651), Expect = 1.950e-82 Identity = 138/225 (61.33%), Postives = 163/225 (72.44%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLDAPGGGGAEGD 675
LRPNNGSII+ R IL LDDFKCH+ + FIA L++ ANTIVI IPGG T LLQPLDRMLNKQMKRL+R KYTA +A+A AD +GKLKPP RGVVST CK++WE+ITP+ VKTC KI GLTLALDGS+ HAWC HNF E YR+LL++Q A HP+V PPL LP VP G S + A ++V+ KLLP A ES +VE+SE GGG AEG+
Sbjct: 26 LRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVSEXXXXXXXXXXQGGGDAEGE 249
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 255 bits (651), Expect = 5.160e-82 Identity = 134/224 (59.82%), Postives = 166/224 (74.11%), Query Frame = 1
Query: 4 RPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLDAPGGGGAEGD 675
RPNNGSI++ RP IL LDDFKC +D+ FIA L++ ANTI I IPGGLT LLQPLDR+LNKQMKR++R KYTA +A+A AD +GKLKPP RGVVST C E+WE+I P+ VKTC KI GLTLALDG + HAW HNF E YR+LL++Q A HP+ PPL LP VP G + A ++V+ KL+P A ESA +VE+ E DS+VE+++ GGGGAEG+
Sbjct: 27 RPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGFDFNPITGAQKEVEEKLMPYVAD-ESASEVEVLEGDSDVEVVEGQGGGGAEGE 249
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 261 bits (666), Expect = 1.050e-80 Identity = 133/215 (61.86%), Postives = 159/215 (73.95%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLD 645
LRPNNGS+++ R IL LDDFKCH+D FIA L++ ANTIVI IPGGLT LLQPLDRMLNKQMKRL+R YTA TA A DP TGKL PPGRG V+T CK +W +ITP+ VKTC KI GLTLALDGS+ HAWC+HNF +GYRELL+QQRVE A HPNV PPL LP VP + + ++ AA++++A LLP G DDS++E+ D
Sbjct: 355 LRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRG-------------DDSDIEIED 556
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 256 bits (655), Expect = 3.150e-80 Identity = 138/225 (61.33%), Postives = 163/225 (72.44%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLDAPGGGGAEGD 675
LRPNNGSI++ RP IL LDDFKCH+D+ FIA L++ ANTIVI IPG LT LLQPLDRMLNKQMKRL+R KYTA +A+A AD +GKLKPP RGVVST CKE+WE+ TP+ VKTC I GLTLALDGS+ HAWC HNF E YR+LL++QR A H +V PPL LP VP G S + A ++V+ KLLP A ES +VE+ E GGGGAEG+
Sbjct: 242 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 259 bits (663), Expect = 3.460e-80 Identity = 133/215 (61.86%), Postives = 158/215 (73.49%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLD 645
LRPNNGSI++ R IL LDDFKCH+D FIA L++ ANTIVI IPGGLT LLQPLDRMLNKQMKRL+R YTA TA A DP TGKL PPGRG V+T CK +W +ITP+ KTC KI GLTLALDGS+ HAWC+HNF +GYRELL+QQRVE A HPNV PPL LP VP + + ++ AA++++A LLP G DDS++E+ D
Sbjct: 362 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRG-------------DDSDIEIED 563
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 249 bits (636), Expect = 5.700e-79 Identity = 127/200 (63.50%), Postives = 152/200 (76.00%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESAR 600
LRPNNGSI++ RP IL LDDFKCH+D+ FIA L++ ANTIVI IPGGLT LLQPLD LNKQMKRL+R K+TA +++A AD +GKLKPP RG+VST CKE WE+ITP+ VKTC KI GLTLALDGS+ HAWC HNF E YR+LL++Q A HPNV PPL LP VP G S + A ++V+ KLLP+ G +AR
Sbjct: 87 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPTSLMGATAR 284
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 257 bits (656), Expect = 7.550e-79 Identity = 133/215 (61.86%), Postives = 156/215 (72.56%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLD 645
LRPNNGSI++ R IL LDDFKCH+D FIA L K ANTIVI IPGGLT LLQPLDRMLNKQMKRL+R YTA TA A DP TG L PPGRG V+T CK +W +ITP+ VKTC KI GLTLALDGS+ HAWC+HNF +GYRELL+QQRVE A HPNV P L LP VP + + ++ AA++++A LLP G DDS++E+ D
Sbjct: 392 LRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAESTANHIEAAAKELEAGLLPCG-------------DDSDIEIED 593
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 256 bits (655), Expect = 2.090e-78 Identity = 136/224 (60.71%), Postives = 161/224 (71.88%), Query Frame = 1
Query: 4 RPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLDAPGGGGAEGD 675
RPNNGSI++ RP IL LDDF+CH+D+ FIA L + NTIVI IPGGLT L PLDRMLNKQMKRL+R KYTA +A+A AD +GKLKPP RGVVST CKE+WE+ITP+ VKTC KI GLTLALDGS+ HAWC HNF E YR+LL++Q A HP+V PPL LP VP G S + A ++V+ KLLP A ES +VE+ E GGGGAEG+
Sbjct: 417 RPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 639
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 246 bits (629), Expect = 8.780e-78 Identity = 133/224 (59.38%), Postives = 160/224 (71.43%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEKVDAKLLPSGAGGESARDVELSEDDSNVELLDAPGGGGAEG 672
LRPNNGSI++ RP IL LDD KCH+ + FIA L++ ANT+VI IPGGLT LLQPLDRMLNKQMKRL+R KYTA + +A AD +GKLKPP RGVVST CKE+WE+ITP+ VK+C KI GLTLALDGS+ HAWC H+F E +LL++Q A HP+V PPL LP VP G S + A ++V+ KLLP A ES +VE+ E GGGGAEG
Sbjct: 123 LRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEG 345
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 241 bits (614), Expect = 2.210e-76 Identity = 122/184 (66.30%), Postives = 143/184 (77.72%), Query Frame = 1
Query: 1 LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSLLQPLDRMLNKQMKRLMRTKYTALTATATADPTTGKLKPPGRGVVSTCCKESWETITPDVVKTCLKIWGLTLALDGSDGHAWCVHNFCEGYRELLQQQRVEREAAHPNVAHPPLYLPAVPEGAISTNLIRAAEK 552
LRPNNGSI++ RP IL LDDFKCH+D+ FIA L++ ANTI+I IPGG+T LLQPLDR+LNKQMKRL+R KYTA +A+A AD +GKLKPP RGVVST CKE+WE+ITP+ VKTC I LTLALDGS+ HAWC HNF E YR+LL +Q R A HP+V PPL LP VP G N I AA+K
Sbjct: 103 LRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFMICRLTLALDGSEDHAWCEHNFGEDYRDLLGEQHAVRLAEHPDVTLPPLKLPKVP-GRFDPNPITAAQK 285 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1404.2924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1404.2924.1 >prot_F-serratus_M_contig1404.2924.1 ID=prot_F-serratus_M_contig1404.2924.1|Name=mRNA_F-serratus_M_contig1404.2924.1|organism=Fucus serratus male|type=polypeptide|length=228bp LRPNNGSIIKHRPSILALDDFKCHRDKAFIADLQKRANTIVILIPGGLTSback to top mRNA from alignment at F-serratus_M_contig1404:45998..46681+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1404.2924.1 ID=mRNA_F-serratus_M_contig1404.2924.1|Name=mRNA_F-serratus_M_contig1404.2924.1|organism=Fucus serratus male|type=mRNA|length=684bp|location=Sequence derived from alignment at F-serratus_M_contig1404:45998..46681+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1404:45998..46681+ >mRNA_F-serratus_M_contig1404.2924.1 ID=mRNA_F-serratus_M_contig1404.2924.1|Name=mRNA_F-serratus_M_contig1404.2924.1|organism=Fucus serratus male|type=CDS|length=1368bp|location=Sequence derived from alignment at F-serratus_M_contig1404:45998..46681+ (Fucus serratus male)back to top |