mRNA_F-serratus_M_contig1401.2916.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: D7FX03_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX03_ECTSI) HSP 1 Score: 281 bits (718), Expect = 1.280e-86 Identity = 147/274 (53.65%), Postives = 193/274 (70.44%), Query Frame = 1
Query: 1 DDLGFEA---RTYNGTNNNLDYPLWGSVNISQVRAVAAANYSDGVSAVSGT-DRPSAREVTTEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGF--VDVWCPEGSASEDIEFFRSQA---DESGV-----RNPLNLATSYLDLDFMYGRSVEEAEALRTMENG--YMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
DDL E R+++G NN +P WG+V +Q+R+VA A Y+D G RP+AREV T+VFL + S SALF+ W L+++DL L +DN + DI C+DG G VDVWCP G+ S+ I F+RS A D+ G R+P+N AT+++DLDF+YGRS +EA ALR+ +G +M LTE+ +P NDDGTWLI DQR+A FPVTFALH++LL EHN CC IAPS G+EGDEDIYQACRGWTIAVF+H+T+NDF++RL G +I+D
Sbjct: 105 DDLDLEEFTPRSFDGVGNNEAFPSWGAVGATQLRSVAGAYYADADFTPPGDLTRPTAREVMTDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIECNDGTGAGGVDVWCPLGAESDPIPFYRSDAALSDDDGALGEETRSPVNYATAFVDLDFVYGRSEDEAAALRSSADGDGFMALTENGLPYVNDDGTWLIADQRSAQFPVTFALHVMLLLEHNRCCMDIAPSEGFEGDEDIYQACRGWTIAVFQHVTENDFLIRLLGGNIQD 378
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 288 bits (737), Expect = 6.540e-85 Identity = 148/266 (55.64%), Postives = 189/266 (71.05%), Query Frame = 1
Query: 13 FEARTYNGTNNNLDYPLWGSVNISQVRAVAAANYSDGVSAVSGT-DRPSAREVTTEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGF--VDVWCPEGSASEDIEFFRSQA---DESGV-----RNPLNLATSYLDLDFMYGRSVEEAEALRTME-NGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
F R+Y+G NN P WG+V ++R+VA A+Y+D + G RP+AREV T+VFLA+ S SALFVAW L++YDL L DN + FDI C+DGNG +D+WCP G++S+ I FFRS A D+ G R+P+N AT+++DLDF+YGRS E+A LR+ + NG+M +TE +P NDDGTWLI DQRTA FPVTFALH++LLREHN CC IAP G E DEDIYQ CRGWTIAVF+HIT+NDF++RL G S+ D
Sbjct: 36 FTPRSYDGVGNNEANPTWGAVGSIELRSVAQADYADELFTPPGDLTRPTAREVMTDVFLASPPAVSTESALFVAWGQLLTYDLSLTVDNSSEPFDIACNDGNGAEGIDIWCPLGASSDPISFFRSDAGLSDDDGANSVETRSPVNYATAFMDLDFVYGRSEEDAATLRSSDGNGFMAVTEKGLPYLNDDGTWLIADQRTARFPVTFALHVVLLREHNRCCVEIAPGEGAETDEDIYQVCRGWTIAVFQHITENDFLIRLLGGSVSD 301
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: A0A6H5K9L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9L2_9PHAE) HSP 1 Score: 259 bits (662), Expect = 1.420e-78 Identity = 132/247 (53.44%), Postives = 166/247 (67.21%), Query Frame = 1
Query: 43 NNLDYPLWGSVNISQVRAVAAANYSDGVSAVSGTDRPSAREVTTEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGFVDVWCPEGSASEDIEFFRSQADESG----VRNPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIR 771
NNLD P WGSV Q+R++ A+Y+DG S G DRP+AREV +EVFLA S S +ALFV W LLV YDLFL DN + DI C+D DVWCP GS S+ I F RS+A E R+P+N AT+++DLD++YGR + +LRT + GYMN+T+D +P DDGTWL+ DQR A PVTFAL +LLR HN CCD +AP DED +Q CR WTIAVF+HIT+ND+ VR G S++
Sbjct: 22 NNLDQPEWGSVGQRQLRSITEASYADGDSEPPGDDRPTAREVLSEVFLANPSTSSTANALFVGWGLLVGYDLFLTLDNASEPLDIACNDAE-IRDVWCPLGSLSDPIPFSRSEAGEDAGGEEARSPINYATAFVDLDWLYGRDEATSASLRTEDGGYMNMTDDELPHLLDDGTWLVADQRPARLPVTFALMTLLLRGHNRCCDEMAPEWDPANDEDAFQFCRQWTIAVFQHITENDWSVRFVGGSVK 267
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 252 bits (644), Expect = 1.120e-72 Identity = 117/202 (57.92%), Postives = 152/202 (75.25%), Query Frame = 1
Query: 172 TEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGFVDVWCPEGSASEDIEFFRSQADES-GVRNPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
T+VFL++ S + +F+AW L+ DL DN + FDI CDDG G VDVWCP G AS+ I FFRS+A + VRNP+N A+S++DLDF+YGRS + A+ALRT E G +++ +D+MP++N+DGTWLI DQRTA FP+TFALHI+LL EHN CC +AP L Y GDEDIYQACRGWTIA F+HIT+++F++ L G SI D
Sbjct: 3 TDVFLSSPPKVSEMNTVFIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPISFFRSEATVTDSVRNPINYASSFIDLDFLYGRSEDAADALRTFEGGMLSMADDNMPIKNNDGTWLIADQRTARFPLTFALHIVLLLEHNRCCVDVAPGLNYTGDEDIYQACRGWTIATFQHITEDEFLILLMGRSIGD 204
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 250 bits (639), Expect = 9.100e-72 Identity = 117/206 (56.80%), Postives = 154/206 (74.76%), Query Frame = 1
Query: 160 REVTTEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGFVDVWCPEGSASEDIEFFRSQADES-GVRNPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
RE+ T+VFL++ S +A+ +AW L+ DL DN + FDI CDDG G VDVWCP G AS+ I FFRS+A + VRNP+N A+S++DLDF+YGRS + A+ALRT E+G +++ +D+MP++NDDGTWLI DQRTA FP+TFALH++LL EHN CC +AP Y GDEDIYQACRGWTIA F+HIT+++ ++ L G SI D
Sbjct: 14 RELMTDVFLSSPPSVSDMNAVAIAWGQLLLLDLSYTVDNSSEPFDIACDDGGGSVDVWCPLGEASDPIPFFRSEATVTDSVRNPINYASSFIDLDFVYGRSEDAADALRTFEDGMLSMADDNMPIKNDDGTWLIADQRTARFPLTFALHVVLLLEHNRCCVDVAPGENYTGDEDIYQACRGWTIATFQHITEDELMILLMGRSIGD 219
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 249 bits (635), Expect = 3.130e-71 Identity = 117/213 (54.93%), Postives = 156/213 (73.24%), Query Frame = 1
Query: 139 GTDRPSAREVTTEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGFVDVWCPEGSASEDIEFFRSQADES-GVRNPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
G R RE+ T+VFL++ S +A+ +AW L+ DL DN + F+I CDDG G VDVWCP G AS+ I FFRSQA + VRNP+N A+S++DLDF+YGRS + A+ALRT + G +++ +D+MP++N DGTWLI DQRTA FP+TFALH++LL EHN CC +AP+L Y DED+YQACRGWTIA F+HIT+++F++ L G SI D
Sbjct: 7 GALRGQPRELMTDVFLSSPPSVSDMNAVSIAWGQLLLLDLSYTVDNSSEPFEIACDDGGGSVDVWCPLGEASDPIPFFRSQATVTDSVRNPINYASSFIDLDFVYGRSKDAADALRTFDGGMLSMADDNMPIKNSDGTWLIADQRTARFPLTFALHVVLLLEHNRCCVDVAPALNYTSDEDMYQACRGWTIATFQHITEDEFLILLMGRSIGD 219
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 236 bits (601), Expect = 2.080e-68 Identity = 123/224 (54.91%), Postives = 148/224 (66.07%), Query Frame = 1
Query: 16 EARTYNGTNNNLDYPLWGSVNISQVRAVAAANYSDGVSAVSGTDRPSAREVTTEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGFVDVWCPEGSASEDIEFFRSQADESG----VRNPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDE 675
E RTYNGT NNLD P WGSV Q+R++ A+Y DGVS G DRP+AREV +EVFLA S S +ALFV W LLV YDLFL DN + DI C+D DVWCP GS S+ I F RS+A E R+P+N AT+++DLD+MYGR + +LRT + GYMN+T D +P DDGTWL+ DQR A PVTFAL +LLREHN CCD +AP DE
Sbjct: 43 ERRTYNGTGNNLDQPEWGSVGQRQLRSMTEASYGDGVSEPPGDDRPTAREVLSEVFLANPSTTSTANALFVGWGLLVGYDLFLTQDNASEPLDIACNDAE-IRDVWCPLGSLSDPIPFSRSEAGEDAGGEEARSPINYATAFVDLDWMYGRDEATSASLRTEDGGYMNMTNDELPHLLDDGTWLVADQRPARLPVTFALMTLLLREHNRCCDEMAPEWDPANDE 265
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.930e-68 Identity = 120/213 (56.34%), Postives = 155/213 (72.77%), Query Frame = 1
Query: 172 TEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGF--VDVWCPEGSASEDIEFFRSQA---DESGV-----RNPLNLATSYLDLDFMYGRSVEEAEALRTMENG--YMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
T+VFL + S SALF+ W L+++DL L +DN + DI C+DG G VDVWCP G+ S+ I F+RS A D+ G R+P+N AT+++DLDF+YGRS ++A ALR+ +G +M LTE +P NDDGTWLI DQR+A FPVTFALH++LL EHN CC IAP G+EGDEDIYQACRGWTIAVF+HIT+NDF++RL G +I+D
Sbjct: 2 TDVFLESPPALSTMSALFIGWGQLLAFDLSLTSDNSSEPLDIDCNDGTGAGGVDVWCPLGAESDPIPFYRSDAALSDDDGALSEETRSPVNYATAFVDLDFVYGRSEDDAAALRSSADGDGFMALTESGLPYVNDDGTWLIADQRSAQFPVTFALHVMLLLEHNRCCIDIAPGEGFEGDEDIYQACRGWTIAVFQHITENDFLIRLLGGNIQD 214
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 216 bits (549), Expect = 9.710e-60 Identity = 105/205 (51.22%), Postives = 141/205 (68.78%), Query Frame = 1
Query: 172 TEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDG--NGFVDVWCPEGSASEDIEFFRSQADES--GVRNPLNLATSYLDLDFMYGRSVEEAEALRTMENGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
T+VFL +++ S +S+LF+AW L++YDL L N T S D+PC+D NG +DVWCP G+ASEDI F RS A E GVR+P+N A+SY+DLDF+YGRS EEAE LRTME+G+MN+T+ +P QN+DGTWL+ AP +G+EGDEDI+QACRGWTIA+F+H+T NDF++RL G+++ D
Sbjct: 2 TDVFLTSTAGLSAKSSLFIAWGQLLTYDLALTVANGTESLDVPCNDADQNGGIDVWCPLGAASEDIPFSRSDAAEGTDGVRSPINYASSYIDLDFVYGRSAEEAELLRTMEDGFMNVTDSGVPFQNEDGTWLV-----------------------------APDMGFEGDEDIFQACRGWTIAIFQHVTQNDFLIRLLGITLTD 177
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Match: A0A6H5K036_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K036_9PHAE) HSP 1 Score: 201 bits (511), Expect = 5.770e-57 Identity = 113/226 (50.00%), Postives = 142/226 (62.83%), Query Frame = 1
Query: 148 RPSAREVTTEVFLAASSVRSPRSALFVAWSLLVSYDLFLNADNETLSFDIPCDDGNGF--------VDVWCPEGSASEDIEFFRSQA---DESGV-----RNPLNLATSYLDLDFMYGRSVEEAEALRTME-NGYMNLTEDSMPVQNDDGTWLIGDQRTAVFPVTFALHIILLREHNICCDTIAPSLGYEGDEDIYQACRGWTIAVFEHITDNDFIVRLTGLSIRD 774
RP+AREV T+VFLA+ S SALFVAW+ L++YDL L D + FDI CDDG D+WCP G +++ I FFRS A D+ G R+P+N AT+++ LDF+YGRS E+A LR+ + NG++ I DQRTA F VTFALH++LLREHN CC I P G + DEDIYQACRGWTIAVF HIT NDF++RL S+ D
Sbjct: 132 RPTAREVMTDVFLASPPAVSTESALFVAWAQLLTYDLSLAVDISSEPFDIACDDGERVEGATGRRETDIWCPLGGSTDPISFFRSDAGLSDDDGTNSAETRSPVNYATAFIGLDFVYGRSEEDAATLRSSDGNGFIT----------------IPDQRTARFLVTFALHVVLLREHNRCCVEIEPGEGAKTDEDIYQACRGWTIAVFLHITKNDFLIRLLRGSVSD 341 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1401.2916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1401.2916.1 >prot_F-serratus_M_contig1401.2916.1 ID=prot_F-serratus_M_contig1401.2916.1|Name=mRNA_F-serratus_M_contig1401.2916.1|organism=Fucus serratus male|type=polypeptide|length=301bp DDLGFEARTYNGTNNNLDYPLWGSVNISQVRAVAAANYSDGVSAVSGTDRback to top mRNA from alignment at F-serratus_M_contig1401:55487..58753+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1401.2916.1 ID=mRNA_F-serratus_M_contig1401.2916.1|Name=mRNA_F-serratus_M_contig1401.2916.1|organism=Fucus serratus male|type=mRNA|length=3267bp|location=Sequence derived from alignment at F-serratus_M_contig1401:55487..58753+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1401:55487..58753+ >mRNA_F-serratus_M_contig1401.2916.1 ID=mRNA_F-serratus_M_contig1401.2916.1|Name=mRNA_F-serratus_M_contig1401.2916.1|organism=Fucus serratus male|type=CDS|length=1806bp|location=Sequence derived from alignment at F-serratus_M_contig1401:55487..58753+ (Fucus serratus male)back to top |