|
|
Homology
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE) HSP 1 Score: 528 bits (1360), Expect = 1.080e-179 Identity = 348/565 (61.59%), Postives = 396/565 (70.09%), Query Frame = 3
Query: 66 MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQV---YVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSDPTVPRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFEDDFHYRGRAVEKAVAER--SGGKXXXXXXXXXXXXSNKAVQLLYTKNWRGEEVVVEIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAK--------------RIKKALPTFLSGSNISGEPGXXXXXXXXXXXXXXXXXXXXXXXSDETATNGKSGDDTAAAHVRRLGVANVTSLEERDEIKKKLLPWTEHMKQVWRRQQTELEDASGSGEDGGSDPWWKHEDGD-----------------AXXXXXXXXXXSLGGGLRPGVMFRVGGRYVTMDAVTNEDAAKMSPDEYTRFYNLAVSQRG 1652
M DM+AI+ALQKAERLVAT+ARAFYTD TVLVVDTL+REKYIKD DE+LGSRLNL+P+QVR+A+AELL+EG AAKE MSD++YSGR+S YW+IDLRHAVNVILLRV MKE+LSQRQEAKAA Q YVCPRCHEKFEVMDI KLSNGD SFCCSHCCPNDDHSGC +GSGYTL +F+DK+GLD+VT LI LNEQLG+S+DP VPRESI+EL+H+LRDTVVP+NLPSQLR+RGMGGQQRGD SSAHARF+DDFH+RGRA +KA AER +GG+ S++ VQ+LYTKNWRGEEVVVEIE XXXXXXXXXXX XXXXXXXXXXXXX + R KKALPTFL GS ISG XXXXXXXXXXXXXXXXXXX RRLGVA VTS+ ERDE+KK+L PWTE MKQVWRRQQ A L G+ G FRVG R+V ++A+T ED AKMS ++YTRFYN+ V + G
Sbjct: 1 MADMNAIVALQKAERLVATIARAFYTDITVLVVDTLIREKYIKDKDEDLGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQALPTYVCPRCHEKFEVMDIYKLSNGDRSFCCSHCCPNDDHSGCKKGSGYTLEDFNDKKGLDSVTALIGQLNEQLGESTDPAVPRESIFELVHSLRDTVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGRA-----------SSRPVQVLYTKNWRGEEVVVEIEQSXXXXXXXXXXXAEGXXXXXXXXXXXXXGLLLPSRAALKRKAADAXXXXXXXXXRAKKALPTFLKGSAISGNYNNTADXXXXXXXXXXXXXXXXXXXX-------------XXXXARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGAPQARTSARLLGLSAGVGAGQRFRVGVRFVPIEALTEEDIAKMSAEDYTRFYNVVVGEGG 541
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: A0A836CC40_9STRA (TFIIE alpha subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC40_9STRA) HSP 1 Score: 234 bits (596), Expect = 3.710e-65 Identity = 147/372 (39.52%), Postives = 192/372 (51.61%), Query Frame = 3
Query: 60 STMTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSDPTVPRESIYELIHA----------------------------------------------------------------LRDTVVPTNLPSQLRERGMGGQQRGDTSSAH-ARFEDDFHYRGRAVEKAVAERSGGKXXXXXXXXXXXXSNKAVQLLYTKNWRGEEVVVEIE 980
ST D+ I LQ+AE+LV+TV RAF+ D VLV+DTL+REKY+KD D++LG+RL L+P+QVRA +A L EGLA +E+M D+ GR + YW++D RHAVNVI LR M+ L + + A+ ARQ Y CP+C F V++I KL NG FCCSHCC D H C RG ++L +F +++ L TVT + L EQL S+ P R +Y+L+ L D VP+NLPS+LR RG+GG RG ++ ARF DD R A GG SN+AV LLY +N G EVVVEIE
Sbjct: 2 STQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGP-HSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDD---RFSLHAGYAAGTKGGDGAHG--------SNRAVDLLYARNAAGYEVVVEIE 361
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: D8LCF1_ECTSI (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF1_ECTSI) HSP 1 Score: 197 bits (500), Expect = 1.670e-56 Identity = 100/124 (80.65%), Postives = 115/124 (92.74%), Query Frame = 3
Query: 66 MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQ 437
M DM+AI+ALQKAERLV+T+ARAFYTD TVLVVDTL+REKYIKD DEELGSRLNL+P+QVR+A+AELL+EG AAKE MSD++YSGR+S YW+IDLRHAVNVILLRV MKE+LSQRQEAKAA Q
Sbjct: 1 MADMNAIVALQKAERLVSTIARAFYTDITVLVVDTLIREKYIKDKDEELGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQ 124
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: D8LCF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF2_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.450e-48 Identity = 178/349 (51.00%), Postives = 203/349 (58.17%), Query Frame = 3
Query: 672 VPRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFEDDFHYRGRAVEKAVAER--SGGKXXXXXXXXXXXXSNKAVQLLYTKNWRGEEVVVEIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRIKKALPTFLSGSNISGEPGXXXXXXXXXXXXXXXXXXXXXXXSDETATNGKSGDDTAAA---HVRRLGVANVTSLEERDEIKKKLLPWTEHMKQVWRRQQTELEDASGSGEDGGSDPWWKHEDGD-----------------AXXXXXXXXXXSLGGGLRPGVMFRVGGRYVTMDAVTNEDAAKMSPDEYTRFYNLAVSQRG 1652
VPRESI+EL+H+LRD VVP+NLPSQLR+RGMGGQQRGD SSAHARF+DDFH+RGRA +KA AER +GG+ S++ VQ+LYTKNWRGEEVVVEIE XXXXX XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX H RRLGVA VTS+ ERDE+KK+L PWTE MKQVWRRQQ+ A L G+ G FRVG R+V ++A+T ED AKMS ++YTRFYN V +RG
Sbjct: 4 VPRESIFELVHSLRDIVVPSNLPSQLRQRGMGGQQRGDVSSAHARFQDDFHHRGRAADKAAAERGAAGGRA-----------SSRPVQVLYTKNWRGEEVVVEIEQSEDXXXXXEDWDAEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQHARRLGVAAVTSVAERDEMKKRLRPWTERMKQVWRRQQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGAPQARSSARLLGLSAGVGAGQRFRVGVRFVPIEALTEEDIAKMSAEDYTRFYNAVVGERG 341
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: A0A4D9CU86_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU86_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.240e-30 Identity = 84/242 (34.71%), Postives = 130/242 (53.72%), Query Frame = 3
Query: 93 LQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQL-GKSSDPTV-PRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFE 812
L+ A+RLV VARAFY D TV+V+D L+R +++KD+D + +RL + +Q R + ELL E L E + D+L +G+ +++ID H NV+ R+ M L + + Q Y CP C ++++ L N FCC CC ++ H+ C GS + L G + V L + + Q+ G +S+ + P + IY L+ AL +P+NLPS+L G+GG G T R E
Sbjct: 33 LELAKRLVRAVARAFYADDTVVVLDALVRGRHVKDTD--IDTRLGVGAKQARRLLTELLEERLIKTEDVVDEL-TGKRELFYYIDFSHFTNVVRYRIHLMHRELERMEREANDNQTYECPVCGRALPLLEVQPLRNKRYGFCCPTCCLSELHATC-EGSQWQLRPKSGVTGFEEVQALKEKMRAQMYGAASETSAAPHDGIYNLLSALEHKPLPSNLPSELIAVGVGGLPAGGTELQRRRRE 270
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: A0A482S8Q7_9ARCH (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8Q7_9ARCH) HSP 1 Score: 132 bits (331), Expect = 7.360e-30 Identity = 77/230 (33.48%), Postives = 129/230 (56.09%), Query Frame = 3
Query: 66 MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYW---FIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSDPTVPRESIYELIHALRDTVVPTNLPSQ 746
MT +A AL AE+L+AT+ARAFY D V+V+D L+REKY+ D E+G RL + + VR + +L +E L E + G + +W ++D + VN++ RV M++ L++++ ++ + Y CP C F +D KL + D F CSHCCP+++ +TL+E +++ + ++ ++EQ K D + I+EL+ L+D +P NLPS+
Sbjct: 1 MTTTAARQALDLAEQLIATIARAFYPDDVVVVLDALVREKYL--IDREIGPRLKMSEKDVRKVINQLETEMLIKAEDVP----LGDGASFWHCYYVDYQVFVNIVRYRVFLMQQRLNKQESSELSEVQYKCPTCKNVFSSLDALKLLSSDHKFICSHCCPHENCRTLPAEPYFTLIEIDNRRKISSLQTQQKKMSEQFCKDKDLHL---GIFELLSKLKDVQLPHNLPSE 221
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: A0A8K1C2Y0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2Y0_PYTOL) HSP 1 Score: 117 bits (292), Expect = 2.830e-24 Identity = 74/232 (31.90%), Postives = 125/232 (53.88%), Query Frame = 3
Query: 105 ERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTS-EYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPR--CHEKFEVMDICKL-SNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSDPTVPRESIYELIHALRD-----TVVPTNLPSQLRERGMGGQ 773
E+LV + RAFY D V+V+ L+REK++KD +E+G+ +NL+ +QVR M EL + L +E ++D+ G +S YW+ID ++ V V+ R+ M+E L + ++ + RQ Y C C ++ +++ +L G F C HC L+E + L+ + L L +Q+ + + RE I+E++ + D V+PTNLPS+ R G+GG+
Sbjct: 18 EKLVNLIGRAFYADEHVVVLQALIREKFLKD--DEMGNAVNLQTRQVRKIMNELHQDMLVCEEVLNDKRLGGSSSTSYWYIDYKYFVEVVQYRLYVMQEHLKENEKLEIERQTYQCKNSDCGREYTALEVQRLLMPGQFQFRCGHC-------------NEVLLECDNNDRLEKIQALDRKLKDQMNRQAGM---REGIFEVLKRINDYVKEGNVLPTNLPSENRAAGIGGK 231
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: A0A6G0X257_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X257_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.100e-22 Identity = 76/234 (32.48%), Postives = 122/234 (52.14%), Query Frame = 3
Query: 96 QKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRT-SEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCPR--CHEKFEVMDICKLSNGD-SSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSDPTVPRESIYELIHALRD-----TVVPTNLPSQLRERGMGG 770
Q E L VARAFYTD ++V++ LLREKY+KD +E+G+ +NL+ +QVR EL + L +E+++D+ G + + YW+ID ++ V+V+ R+ M+ L + + + RQ Y C C ++ ++ KL D F C HC L+E + + L +V L+ Q+ K+ D ESI E + ++D +P+NLPS+ R G GG
Sbjct: 3 QLVENLAKIVARAFYTDEHIVVIEALLREKYLKD--DEMGNAVNLQTKQVRKICHELEIDHLVLREEVNDKNVGGASKATYWYIDYKYFVDVVRYRLFLMRTRLMENESLEIERQTYRCENDDCGREYTALEAQKLLTPDIHEFFCGHC-------------NSRLLECDNNERLRSVQGLLKKYTAQVNKAEDL---HESINECLKKIQDFFNSGQALPSNLPSENRAAGQGG 218
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: K3WPK9_GLOUD (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPK9_GLOUD) HSP 1 Score: 111 bits (277), Expect = 1.980e-22 Identity = 75/231 (32.47%), Postives = 121/231 (52.38%), Query Frame = 3
Query: 105 ERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTS-EYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVC--PRCHEKFEVMDI-CKLSNGDSSFCCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSDPTVPRESIYELIHALRDTV-----VPTNLPSQLRERGMGG 770
E+LV V +AFY+D V+V+ L+REK++KD +E+GS +NL+ +QVR M EL + L +E ++D+ G +S YW+ID ++ V+V+ R+ M E L ++ + RQ + C P C ++ ++ L G F C HC L+E + L+ + L +Q+ K + E IYE++ + D V +PTNLPS+ R G+GG
Sbjct: 6 EKLVHLVGQAFYSDEHVVVLRALIREKFLKD--DEMGSAVNLQTRQVRKIMNELHQDHLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYVMHEHLKDSEQLEIERQTFQCKDPDCGREYTALEAQLLLMPGQFQFRCGHC-------------NEPLLECDNNDRLEKIQSLQRKFKDQMNKQAGM---HEGIYEVLRRIGDFVKEGHILPTNLPSENRAAGLGG 218
BLAST of mRNA_F-serratus_M_contig14.2894.1 vs. uniprot
Match: A0A7S1FY03_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY03_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.170e-22 Identity = 91/304 (29.93%), Postives = 143/304 (47.04%), Query Frame = 3
Query: 102 AERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELGSRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSG-RTSEYWFIDLRHAVNVILLRVCYMKEMLSQRQEAKAARQVYVCP-----RCHEKFEVMDICKLSNGD-SSFCCSHCCPND-DHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSDPTVP-RESIYELIHALRDTVVP--TNLPSQLRERGMGGQQRGDTSSAHARFEDDFHYRGRAVEKAVAERSGGKXXXXXXXXXXXXSNKAVQLLYTKNWRGEEVVVEIE 980
AE LV+ VARAFY D TV ++D LLR+KY+++ D + RL+L + +R M L EGL E++ D G + +++W+ID HAV VI LRV M L + + +Y+CP C+ ++ + ++++ F C C N ++ S YTL + + L I + EQL + R I++L+ LR T P +NLPS+ R+ G+G ++ T R ++K + GG S+ L + KN RGEE+ E+E
Sbjct: 21 AEHLVSLVARAFYQDETVAIIDVLLRDKYLREDD--MSKRLSLPGKMLRKFMEYLRDEGLVKVEEVDDLDTGGSQRTKFWYIDYNHAVKVIRLRVHLMMSKLEKAERMARGSSMYLCPGYATRACNGRYTEEEAQRVTDHQFGMFLCIECYNNHVNNPDPPPISQYTLKLVDNSKELKAAVANIKKVKEQLSSKTIGNFQLRYGIFDLLQLLRKTREPLSSNLPSENRDNGIGSKRIEGTG------------RTAFIKKKKQLKQGGHSMSDFGR-----SDDRADLTFLKNARGEEIAFEVE 305
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 111.7 |
| Seed ortholog evalue | 1.1e-21 |
| Seed eggNOG ortholog | 65071.PYU1_T006901 |
| Preferred name | GTF2E1 |
| KEGG ko | ko:K03136,ko:K06636,ko:K20607 |
| KEGG Pathway | ko03022,ko04016,ko04110,ko04111,ko04113,ko04114,ko05169,ko05203,ko05418,map03022,map04016,map04110,map04111,map04113,map04114,map05169,map05203,map05418 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000428,GO:0000988,GO:0000989,GO:0000990,GO:0000991,GO:0000993,GO:0001076,GO:0001098,GO:0001099,GO:0001112,GO:0001113,GO:0001120,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005673,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009301,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016073,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0034367,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042795,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097550,GO:0097659,GO:0098781,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990234,GO:2000112,GO:2001141 |
| EggNOG free text desc. | Transcription initiation factor TFIIE alpha subunit. Source PGD |
| EggNOG OGs | 1MF2I@121069,COG1675@1,KOG2593@2759 |
| EC | 2.7.12.2 |
| COG Functional cat. | K |
| Best tax level | Pythiales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko03021,ko03036 |
| Exons | 5 |
| Model size | 1818 |
| Cds size | 1590 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929382.8006704-UTR-F-serratus_M_contig14:656092..656157 | 1622929382.8006704-UTR-F-serratus_M_contig14:656092..656157 | Fucus serratus male | UTR | F-serratus_M_contig14 656093..656157 + |
| 1690962826.3808496-UTR-F-serratus_M_contig14:656092..656157 | 1690962826.3808496-UTR-F-serratus_M_contig14:656092..656157 | Fucus serratus male | UTR | F-serratus_M_contig14 656093..656157 + |
| 1622929382.8934553-UTR-F-serratus_M_contig14:667745..667908 | 1622929382.8934553-UTR-F-serratus_M_contig14:667745..667908 | Fucus serratus male | UTR | F-serratus_M_contig14 667746..667908 + |
| 1690962826.4477117-UTR-F-serratus_M_contig14:667745..667908 | 1690962826.4477117-UTR-F-serratus_M_contig14:667745..667908 | Fucus serratus male | UTR | F-serratus_M_contig14 667746..667908 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929382.8163936-CDS-F-serratus_M_contig14:656157..656276 | 1622929382.8163936-CDS-F-serratus_M_contig14:656157..656276 | Fucus serratus male | CDS | F-serratus_M_contig14 656158..656276 + |
| 1690962826.3946078-CDS-F-serratus_M_contig14:656157..656276 | 1690962826.3946078-CDS-F-serratus_M_contig14:656157..656276 | Fucus serratus male | CDS | F-serratus_M_contig14 656158..656276 + |
| 1622929382.8348365-CDS-F-serratus_M_contig14:664578..664831 | 1622929382.8348365-CDS-F-serratus_M_contig14:664578..664831 | Fucus serratus male | CDS | F-serratus_M_contig14 664579..664831 + |
| 1690962826.4024556-CDS-F-serratus_M_contig14:664578..664831 | 1690962826.4024556-CDS-F-serratus_M_contig14:664578..664831 | Fucus serratus male | CDS | F-serratus_M_contig14 664579..664831 + |
| 1622929382.8535347-CDS-F-serratus_M_contig14:665408..665638 | 1622929382.8535347-CDS-F-serratus_M_contig14:665408..665638 | Fucus serratus male | CDS | F-serratus_M_contig14 665409..665638 + |
| 1690962826.415762-CDS-F-serratus_M_contig14:665408..665638 | 1690962826.415762-CDS-F-serratus_M_contig14:665408..665638 | Fucus serratus male | CDS | F-serratus_M_contig14 665409..665638 + |
| 1622929382.865913-CDS-F-serratus_M_contig14:666109..666358 | 1622929382.865913-CDS-F-serratus_M_contig14:666109..666358 | Fucus serratus male | CDS | F-serratus_M_contig14 666110..666358 + |
| 1690962826.4259136-CDS-F-serratus_M_contig14:666109..666358 | 1690962826.4259136-CDS-F-serratus_M_contig14:666109..666358 | Fucus serratus male | CDS | F-serratus_M_contig14 666110..666358 + |
| 1622929382.8799567-CDS-F-serratus_M_contig14:667006..667745 | 1622929382.8799567-CDS-F-serratus_M_contig14:667006..667745 | Fucus serratus male | CDS | F-serratus_M_contig14 667007..667745 + |
| 1690962826.4356418-CDS-F-serratus_M_contig14:667006..667745 | 1690962826.4356418-CDS-F-serratus_M_contig14:667006..667745 | Fucus serratus male | CDS | F-serratus_M_contig14 667007..667745 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig14.2894.1 >prot_F-serratus_M_contig14.2894.1 ID=prot_F-serratus_M_contig14.2894.1|Name=mRNA_F-serratus_M_contig14.2894.1|organism=Fucus serratus male|type=polypeptide|length=530bp
MTDMSAIMALQKAERLVATVARAFYTDTTVLVVDTLLREKYIKDSDEELG
SRLNLKPQQVRAAMAELLSEGLAAKEKMSDQLYSGRTSEYWFIDLRHAVN
VILLRVCYMKEMLSQRQEAKAARQVYVCPRCHEKFEVMDICKLSNGDSSF
CCSHCCPNDDHSGCTRGSGYTLVEFHDKQGLDTVTVLIDLLNEQLGKSSD
PTVPRESIYELIHALRDTVVPTNLPSQLRERGMGGQQRGDTSSAHARFED
DFHYRGRAVEKAVAERSGGKGGGGGSGGRSTSSNKAVQLLYTKNWRGEEV
VVEIEQSDDEDDDEDWDEEAAVLFPSRAAIKRKAAEQAAKEERAAKRIKK
ALPTFLSGSNISGEPGGGSGGGGSVVGAGGEWDEDDGDSSDETATNGKSG
DDTAAAHVRRLGVANVTSLEERDEIKKKLLPWTEHMKQVWRRQQTELEDA
SGSGEDGGSDPWWKHEDGDAAPNGGGGRRRSLGGGLRPGVMFRVGGRYVT
MDAVTNEDAAKMSPDEYTRFYNLAVSQRG* back to topmRNA from alignment at F-serratus_M_contig14:656093..667908+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig14.2894.1 ID=mRNA_F-serratus_M_contig14.2894.1|Name=mRNA_F-serratus_M_contig14.2894.1|organism=Fucus serratus male|type=mRNA|length=11816bp|location=Sequence derived from alignment at F-serratus_M_contig14:656093..667908+ (Fucus serratus male)
GTTCGTGGAAGGTGGAGGCAAAAGCGGCACAGTAGACAAGCTGGGCGTGA
GTACGAGGAAGCACCATGACGGATATGAGCGCCATCATGGCGCTTCAAAA
GGCTGAGAGGCTGGTGGCCACGGTGGCGAGGGCATTCTATACCGATACCA
CCGTGCTCGTTGTCGATACGCTCCTGCGCGAAAAGTGAGGCAACTTGTCT
TGAAGTACGTTACCAGGCCTCTTTTACGTATTAGATGTCCCGTACTACCT
GTGCAAGTACAGGTCCATGTGCCAGGTATCTAACAACCTGCGCTTGTAAA
GTTTGAGAGGGTTCAGTCTTTCGATGAGGGGTGAACCTGTATCGCAGGAC
AAGTCTTGTATAGTTGTAGGTGTAGTTTTGATCCTTCCACGTTGTGCCGG
GGACTGGAAAATCGAGCACTTTGCTAAAAACATACTGAACCAGGTACCGC
AGTATTGTACTACTGTTAATACACATCCCGGAGTAGTATTTACCTTATTA
TAGGACACCAACGTACGGCTTGCCTAATAATAGTACGTGCTCGTATCATA
GCTGATACTGTCGTACAAGTAGGTGGACCTTCCCCCTCCTTCCATGACGT
GACAGCATGCAATGAACTTTTTTCTACTACCTTGGTACGAGCCAAGATAT
CGACATGGACAAGCAGTAGTACTCATTCTCGAACCTTTGTGTTCCCTGTT
CCCTGTTGTACCTGTAACTTCTAAACCACAGAATGTAGAACCTGGAAACG
TCTTCGTACCGCAATAAATAATTTCACCGTGCTCTCTTGTTTGAACTCGT
TGTTACAACATGACCTGGTAAGGTTTTTTTATGATCGTAGCTCTGTGTGG
TCAGAGTACTTTCAGCAGAGTATGGATAAACTCTCGTAGTCAGCTGAACA
GCAAGAAAAATGGTTTGCCCCCCCCTTGTTCCTGTTCGCACGTGCGAATT
TGGTCTCGCTAGACGGGTTCGACCGTCCCATCCCGCGTCGGTCTCTCATC
CTCCATACTCAGACTGAATATGGTGCTGTCTCGCGAGATTGTTCCCGCTT
TCCGCGACAGCGTCCGTTTATGTATTTATACCCTCAACCGCCATCGGGGT
ACTCCCGAGTTCATGGAGGGCACGCAATTGCGTACCGATGGCGTTCACTA
CGCCGATACTTTCAACATGCCCACTTCATACCATAAGTAGGTTTGGCAAA
GAGAGGCGTATACATATCAATTGGTCCATGGTAATGCAAAGGCAGCACCC
GTTACTGGAACTGCGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACG
CAATTGCGTGACCCGATAAACACGGGACTGACCCGATGACGAATGGCGGT
TTAAATAAATAAATGGACGCCCCTGCGGAAATCGAGAGTAATTTTCGTAA
GTAAGCACCAGATTCAGCCTGAGTATGGAGATGGGCAGGCTGACGCGGGA
CGGGACTGCCGAAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGT
GGACAGGAAAATATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTG
GCAACCTTACCCGGTTGATCCTCACTCTTGCTAGATGTGATGCTCAAACA
TACATACTGCCGAGAGTCTGCCGGCACAGAGCCAGTAGTCGTCAAGGTTA
TGTGAGAATCAAATCAATCATCAATCAAGGGAACAGTAGTTCCAgtactG
TAATGGGTGCTGCCTTTTTCAGGTATCACATCATGAGCCCAATTTTTATG
CGCCTCTCTTTTCCATAAAGTACAGTAGATTATCGGAGGCGTGCTCTATC
CGTAATTTATTACTTAGCGCTCGACCTAGGCGATGAGAAGAAACCATGGA
TCAGAAGGTAAGGTACCAAGACAACTACGGTGGGTACACTAGAACATGAT
TGGTTTGATTGAGACAGCTGGTGGGAGAAAATCCAGATGAATAAATAGTC
TTCATTTTTTCTCCTCGAATGAGTTTTTTGTTCGTACCTGTATTAAATTT
CGTAATCACAGACGGGATAGTAGGTACAGCAGTACAGTACAGAACCACAT
GTAAGTGCAGTCAGCACTATCAGCGGAGTATGGATCAGATCAACCGGGTA
TGGTTCCCAGTCCTGCTCTTGGTCAGCTAGCTGGACAGGAAAAGCGAACT
TTTCCCTGTCCCCGTTCGCCGCTGAAAAAAATCGTCTCGCGAGAGGGGTT
CGGCAGTCCCGTACCGCGTTCGCCCGCTTATTCTCCACACTCAGGCTGGA
TCTGGTGCTTCCTCACGGGATTCCTCCCGCGTTCCACGACGGCGTCCACT
TACTTCTACTATTTATACTGTTTGTAGCTCGTCGTCGGAGTGGGGTAGTG
GTAATGCCGGTACTTCCAACATGCCCACTTCATACTAATAGTGGGTATGG
GAAAGAGAGGCGTATATTAATTGGTCCATGGTGACCTGCCAAGGCAGCAC
TCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGGCGGACTCTCG
GCAGTGAACGCCATCGGTACGCAAGTGCGTGGCCCGATAAACTCGGGACT
GACCAGATGGCGTATGGCGGTTTAGAATAAATAAATGGTCGCTGCCGCGG
AACTCGGGAGGAATCCCGTAAGTAATCATCAGATTCAGCCTGAGTATGGA
GATGAGCAGGCTGACGCGGGACGGGACTGCCGAACCCGTCTCGCGAGACC
AAATTCCCAGGCGCGAACGGGGACAGGGAAACGTTCATTTTCCCTGTTCA
GCTGACCACGAGCAGGATTGGCAACCTTGCCCGGTTGATCCTTACCCTTG
CTATATGTGATAATGACCATACATCTTTAAGAAAACCATCTCCTGTGTTG
TACTGTAGTACCTGTAGTATCAGTACCTGGTACTTTTAAGGGGGATTTTC
TTGGAGAGTTGCGTTGCCGACCATGACGACCGGAAGCCACCCCATGATCG
GCTCTGACGGTTATATAGAAATAACAGCCAACATAAACTGGCTCATGTGA
CTGACAGGTCCTCGTCGCTTGTTGAGAACCGTTGTCTTACCAGCTTCACC
ACCTGAGCTGCTCGAGCAATCCCGGGTAGGTCAGCAAGCAAAGGCGTGTC
CATAAAATGTCGGTCCATCCAGGACCTAGGAATCTTACCCAGGCTTACGT
CGGCGCGCATTACTTCCCAGGCACACTTGCCGCGGTCCGGACAAGCGCTT
CGCGCGCTGGTCCCAATCACTTACTACCTCGCCGTCCATCATGTGCAGGA
GGAGAGCCAACTGTTATGCCATGGTCCTCGCGACAGCTGCGCTGTCTGAG
CATTACAATAACAAAAAGGGCGGCTCCAATATACCATAACCGATATAACC
AATATGTAACCGATATGTAACCGTGATGCTACTGTTACGAGCGATCCCAT
CGTGACTCGATCGAGGTTATATAACCGTTTTACCGCGGAAGAGGGCAGGG
AAGAGAAAAAAACTGTTTTCTCCTCCCCACCAAAGGCGCTAGGTCTCGCG
TCCGTCTTTGAGGCGCAGATTTGGTGTTTGCATGTATACACTATATTATC
GTATCGTATCGTTTTTTACGTCCTCGTACCTTCCAAGCCTTCTTGTACTC
TCTCCTCTTACCCTAACGCGCCAGACCTCGCGCCTCCGTCTGTGAGGGGC
AGCTGTGGTCCTTCTCGTCTCGTGTTCCTGTTCTCGCATCCCCATCCCCC
ATTAAATAATAGCTGAACCTCGCAACGCCTTCCGTGTCACTACAAGTACG
GTATATCACCCTTTTTTGCGCGGATCTCTTGCTGAACCGAAAATCCACAG
AAGCTGGCCGCATTTGTGTTTGTTCTCTAAAAAAAAAAACTGGCGGCATT
GAAGTCGCGGTTTTCGTTTCATTTGTGCTTGCTTGTCTCTGTTTCCCACA
GCAGCCGCTCGATACATAAAAAAAAAAAAGCAAGAGCATGTTTTGGAAGG
CTTTTCCTAGAAAAAAGACGGGGTTGTCGGTTTCCCAGTTATGACCGTTC
TCCTGAGAACGTAGGTAAAATTTTGCCAACTTTGCAGATCCCTACAAACT
CTTGTATAAGTTTGTACGGAGGCGTGTGATTAAAATTTCCGCAAAGTTTG
TAAATGACGCTTCTTCTTTTTTTCTTTTTTTCAATCTCACTTATACCCGC
TGGACTTCATAATTACCATCTTGCCTGTGGTCACGAAGGATTTTCCCATC
TCTCCCCGGTTCACGCCTTACATTTTTTTTATCCGATGCAAGTTCGGCAA
TCTTACAACTGGTCAACCAATGGTTGAATTTTACTTACTCACGTTCCCGC
GCTTTCCGTTACGGGGAAAAAAAACACAAATCCTACTTTGGTAAGGATCG
AACTCACGACTTCCGCACTAGCAGGTGTGCAGGTTACCTACTAGACCATT
CGGGCGGCGAAGCAAGAGCATGTTTTAGAAGGTTTTTCCGAGAAAAAATA
CGGAGTTGTCGGTTTCCCAGTTATAACCGTTCTCCTTAGAACGTAGGTAA
AATTTTGCCAACTTTGCAGATCCCCACAAACTCTTGTGAAAGTTTGTACG
GAGGCACGTGATTGAATTTTCCGCAAAGTTTGTAAATGACGCTTCTTCTT
TTTTTTTTTTTTTTTTTTAATCACACTTATAGCCGATGGACCTCTAATTA
CCATCCTGCCTGTGgtcactacggatGTCACTAAGGATCTTCCCATCTCT
CCCCGGTTCACGCCTTACATTTTTTTTATCGCGATGCAAGTTCAGCAATC
TTACAACTGGTCAACCAATGGTTGAATTTTACTTACTCGCGTTCCCATGC
TTTCCGTTACGGAAGAAAAAACACAAATCCTACTTTGGTAGGATTGAACT
CACGACTTCCGCACTAGCAGGTGTACAGTTACCTATAATACTATTATAGA
CCACTCGGGCGTCGAAGCAAGAGCATGTCTTGGAAGGTTTTTCCCAGTTA
TGACCGTTCTCCTTAGAACGTGGGTAAtTTTTTGCCAACTTTGCACATCC
CTATAAACTCTTGTGTAAGTTTGTACGGAGGCGTGTGATTGAAAATTTCC
GCAAAGTTTGTAAATGACGCTTCTGCAGACTTTAATCGGTGAACGTTCAT
TTTTCATATTATTTGTGATACCACTCTAAGTTACTTGTACTATTTATAGC
AAGTTACTTTCTACCCAGCGACGAAGTCGTTCTCCTTAGGTTGCCAACGT
TACGGCGCGCCAAGAAGCTTCTCAGGCACGAAGCGCGGCATCAATGCGAT
GACCGCTGCTGGAAGTTATGACGATATCCACTACCAGGGACATGGGTTGT
ACTCGTATCTTGGAAAGCGCGCGCCCTTCTTTCGCTACCTCGATGTCCCC
CCATGAACTACGACGACAGCTGTCTTGCGCTTTGCGAAGTGCATCACTGG
GGGCAAGTTTGCGTTAGCTGGGTCCGCGTACAAATGCAGGTTGCCGCCAC
GACGGTAGCGTGCAACCCAACAGTGGAACACACCTGTTTGTACTATACCT
ACACTGGAGTTGTTGCGCGTCGGCAGAGAAGGACCGTCTCACTTCCGTTG
TAGTGTTGCAAGAACCCTCTCCCAACACGACAATATTTTTTTATATCGCG
AAATGAGTTTATTTTTTATATTTTCCCAAAACATGCCGTAAACTTTGCAA
CATCCGTTTTTTCGTATACACGAAAGAGCGGTAATCCTGAACGATGGGTC
GGTTTTAAACTAAAATCGAAGCCAAAAAAGTGTAGAAAGAAAAAACGGAA
AACATTCTAAGCTTTGGGTGTGGAAGATATCGATACGCTCTCTTCATCGG
GGGCGTTGTTTCCAAAAACCGGAAACGAACGGAGGTGCCGGTTATTTTCA
ACAAGGGGATCGCTCCAAATTTTTGGAGCTTCCAAATTTTGGAAATAACG
CTCTTGTGGAAGGAGGCGTTTTTTTGTATGATTACGACCAACCTCTAGAT
GGGGGGGCGGGTTCTTCGAGGCCTTCATGGAAAGATGCATTGTAGAACTA
TCAATATCATGACGGCTGCAAGCCACCCACCCCATGACCTGAAAGTCGAC
ATCGTCTCTGATGAACACCTATTACGAAGAGGTTCGAAGCGCGCATATCT
TTGAGTGGCCTTTTCTTGTAGAGCTATGGAGAGAGAGGAGAGAGCAGAAA
GTGGCGATTTACCTTTCTTATTAATAGTTGTACGCCCCTTTCTTTCGTGG
CGAGCGTGGGTCGCTTCAAACAGCCCCCCAGTTTTTCGTTGGTCATCAAT
CAACCTTGTCTGAAACTTGTCACTTAGGTGGTACACTTTAGGTTTGTTGC
GCTGCTCAGTCTGTCGGTCCTCGCATTGTGCGCTATTCATACAGTACAAC
AGTACAGCCGAGAAGTCGTCCATCATCTGTGGTTGCGTTGATTTGACCCA
TCTGGGACAAGGAGCTTTGTTTCTACTGTTGTAAATATTTTCGCGCATCG
ACCTTTTTAATATTATTAGGGTACTCTTTCGAGCATTCCCAAACCACTGA
AACACCGCCCGTAAACTCAAAAGGTCAAATTTTTCCAAACGAAACTCTTG
AAAGCGTTCGTTCCCAAATTTTGGAAAAGCAATCTTTCGCGGTTTTTTCG
TTGTTGTTGCTTCATTGCGCAGGAAAAAAGGAACCTCAATCAAAACGCCG
CGCAAGGTGTATAACCCCACAAAGGTTCAGATGCGTTCAGGTTTTTATTT
CAGCCTTGTTTTCTATGACTTCGAGGATAGACTCTGTTCTCTGAACTATT
TTTTGTACCAGTGTTTCTATTGTATGATGAGTGTGTTGTAGCTTTTACGT
GTTCTGTGTAAAGTGTAAGAAACAACGCATGGATTTTGGCAACCGAGAAG
CCAGAATCGTACCAGTACAAGAATTGTACCGTTACAGCACATCCCCAGCA
TCACGTAGCTGCGGTGAAGCCGAAAGAGTTTAATTCACCTACCGGCCGTA
GCACCAAACCGTGTCGAGAAAGAGAGAGAGCCCCATGGTCTTTAAAGAAA
AACCTGAACGCATCTAGACTATACTGTTAATAGCATACTGTACTGTACTG
TACCCCGGTCAGGAGGAAAAAATGTCAAAACGTTTAGGTGGGATCATAGG
CTGCAAATACAAAACCCCTTCATGGCATGTAGACGGGTTCCCCGATGGTA
GTAAcATTGGATCAACAGTATGATGCCGGGGAGAAGCCCACCGTTATGCT
GTACACTTATATTAATCGCCATGCAGGGACACCAGACAAACACAAAACAA
AAACATTTTTAGTACATATAATAAAATAGGTTTATAATTATATACAGTAT
ATAGTAGTGCCATCGACCCTTATGATGTATGGTCACACATATAGCAAGAG
TTTGGATCAACCTGGTAAGGTTGCCAATCCTGCTTGTGGTCAGCTGAACA
GGGAAAAAGAATATTCCCCTGTCCGCGTTCGTGCCTGAGAATTTGGTCTC
GCGAGACGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATA
CTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGG
CGGCGTCCATATATTTATATTAAACCGCCATACGCCATCGGGTAAGTCCC
AAGTTTATCGGGTCACGCAATATTGCGTACCGATGGCGTTTACTGCCGAG
AGTCCGTCGGCACAGGGCCAGTAAATCTCAAGGTAGTTCCGAACGAGTGC
TGCCTTAGCAAGTCACTATGGACCAATTAATATACGCCTCTCTTTCCCAC
ACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTAACGGCGACTATATA
CGATAAGGGCTTGTATGGTCACACATATAGCAAGAGTATGGATCAACCTG
TTAAGGTTGCCAATCCTGCTCGTGGTCAGCTAAACAGAGAAAATAATATT
CCCCTGTCCGCGTTCGCGCCTGGGAATTTGGTCTCGCGAGACGGTTTCGG
CAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCTG
GTGCTTTATAGTCTATTGATAGAACACAAGCAGTGTATTACAATAATATT
GTAATTGTCAAAGGGGGAGAATGGAGTGATCAAGGCTGATCTATGGTTGG
GTTTCGCAAGCTGGCTTTCTAGAGAGAAAGAGAAAGTTGGCATGCACCGG
GGGGGGGGGGAGAGTAAGTGCTTGCTTGCATTCATTTCTTCGTTCGCCTA
TCAGCAATACATCGAGTGTGGGCACCCAAATTGCTTGATAACTGATACCA
CTACTGTTTCGTTTTGTCTTTACAATGCTGCACACGCGAGACGTCATCGA
GATGAGCCTTTCTGCTCCCTTGACTCGACGGCCTGATGCTTGCTGTTTCG
GTTGTTTCAGCTGTGGCACCAGGAAGTGCGCTCCCGGGGTCTCTTACCAG
TTCGTAGCCTATATACATACTATCGTGACCTACTCGAATGTGCTGCTGCT
GCTGCTGCTGCTGCTGCGGACGAAAAACTGGCAAAGGTATATCAAGGACA
GCGACGAGGAGCTGGGGAGCCGGCTCAACCTCAAGCCCCAGCAAGTCCGC
GCCGCAATGGCCGAGCTGCTATCGGAGGGCTTGGCCGCCAAGGAGAAAAT
GTCGGACCAGCTCTACTCTGGCCGGACCAGCGAGTACTGGTTCATCGACC
TCAGGCACGCCGTAAACGTGATCCTTCTCCGAGTGTGCTACATGAAAGAG
ATGCTCTCCCAGAGGCAAGAGGCTAAGGCCGCTCGTCAGGCGAGTGCCAA
GAAGGCGTGGCGGGAGGAGGAGGGGGGGGAGGGGAGGGAAGTGGCGTCTA
GCCACGTGATAGACCATGCGCTCTCCTCGGATCGTTGTGGTGTTGGGTGG
GGTGGCCTTGTGTCGTTTTTAGTCCCTCGAAGGGGATGGATGGTGATGGC
GGAACGTCGCAATAGCCTCGCCCGGTAAGGGCTCTGCGTTCGAAACGGGC
AGACGCGCTAACCTTACGGGAATATTCTGAATAGTCTCGCTTGTTTAACA
CGCCTTTATTTTTTGCTCCCTCTGATGCTGCAATTAATTAAGTTATGTTC
ATGTTGCCGGGTGGAAGCACAAGGGATCGATCGATCAGATCGATAAGACA
GCGCGCTTATTGCGACTGCCGGAAGCATTCTGAATTATCCGTACTTTATA
GTATTATAATAATTTTACAACGAGTTGATTTTCAACGACGATAGCCCTGC
TCTGCGGTTGGTTTCGATCTCTCTCCTCCGTCTCTCGAAGTGCTTTTGAT
GGAAAAAGCGCGCTTCTCGCTAACTGCCCTCGTTTCGTCTCGCCCCCACG
GCGCGGCAACCACCAGGTCTACGTTTGCCCGAGGTGCCACGAGAAGTTCG
AGGTGATGGACATCTGCAAGCTCTCGAACGGGGACAGCTCCTTCTGCTGC
AGCCACTGCTGCCCGAATGACGACCATTCCGGCTGCACCAGGGGAAGCGG
TTACACCCTCGTAGAGTTCCACGATAAGCAGGGGCTTGATACCGTGACAG
TTCTGATCGATCTCCTCAACGAGCAGCTGGGGAAATCGTCGGACCCGTGA
GCCCTTTTTTTTTTAATTCCCTCGCGTATTTCCTCTCTTCTATTCTAGAG
GCAATGGCCTTGTACGCCCCTGCCGAACGGCGCATGTCGGGAAAAGTGTA
ACTCCACATGCTCCATGCTTCACGCTCCAAAGCTTTGGAAGGTCAATAGG
GCTCGACTGGTGGTGGTACTCAATCCTACAATCCCCTCGTAGCAGTCGTG
TATTAATATTAATACATATAAAATAATATATATATATTTGGTCGTGTTTA
GTGATGAGTCGTTTAAGTTGACGTGAGCCGTGTCCGATTCCGTCATTCCG
CCAACCTCACGAGAGGAAGGGGCCCGTCCTCGCCTCGGCTCTCTGGATTG
CATCATCCGATTCCGCGCTTTTCATGCGACCGACGGCATCGATTCCGATG
TCGCTGTCGCTACCGATGCCGATCCCGCGATTGCTCTTGGACCCTCCCCC
CACCTCACCCCACCCAGAACCGTACCACGAGAAAGCATCTACGAGCTGAT
ACACGCGCTCCGAGATACGGTGGTACCGACGAATCTCCCGAGCCAGCTTC
GAGAGAGAGGCATGGGCGGGCAGCAGCGTGGTGACACCTCCAGCGCGCAC
GCGCGGTTCGAGGACGACTTCCACTATCGCGGCCGCGCGGTAGAGAAGGC
GGTGGCGGAACGGAGCGGTGGAAAAGGAGGTGGTGGCGGCAGTGGTGGAA
GGAGCACTTCTTCCAAGTGAGTTAGCGAATGCTGCGTTTTTGTAGCCGTG
TGTTTTGTGTGTGCGTGTGCATTTTTGTCTGTTTGAACACAATCGCGTAA
TCCAGCCCTGCCATCCTCTTAAACGTTTTATGCTACTCGCATCGGCCCTC
CCAGGGGAGGACTAATAATGGGGGGGTGTGGGTGTGGGTCGCGGTAATGT
GGGCCAGGCAAACGCCAATGTTTTTCGATGTCGTGGGTGTGAATGGTGGC
GTTCCTGAAAGCGCGATGCAGTTTGAACGTCGAAAACGCGATTGACGCTG
CGCCTGTCTTGCCTTGTCCAGTGTGTCCCGCGTACCTTCGCGCCTGAAAA
TAGTGTCACTTGCGAGAGTGTCATCCCACCTGCTAGTGAGACCCTGTCGA
ATCATAGCAACGCACCTGTCCACGGACACGACATTTTTTACGCTCATCCG
TAGCTTCTCTTAACATCATCCAATACACACACACATATCATATATATATA
ATATATATGTACCTGTATATTATATATTATGTATAGTCTCTTCGAGCCGT
CCCGCGGCAGCCGCGACGTCGTGGCAACCACCGTCCCCTGTGATGCCGCC
CCACGTCTCGGAACCCCCCCACACACACACCGGAACCCCCCTGTGCCCTC
GGGAACTCCGCCAGCAAGGCCGTGCAGCTGCTGTACACCAAGAACTGGCG
AGGCGAGGAAGTGGTGGTGGAAATCGAACAGAGCGATGACGAGGACGACG
ACGAAGACTGGGACGAAGAGGCAGCCGTCCTTTTCCCGTCTCGAGCGGCG
ATCAAGCGGAAGGCTGCGGAGCAGGCTGCGAAGGAGGAGCGCGCCGCCAA
GCGCATCAAGAAGGCTCTGCCGACTTTCTTGAGCGGGAGCAACATATCCG
GCGAGCCCGGAGGGGGAAGCGGCGGCGGCGGGAGTGTCGTCGGCGCGGGA
GGCGAGTGGGACGAAGACGACGGCGATTCGTCCGACGAAACCGCCACGAA
CGGTAAGAGTGGCGACGATACGGCGGCGGCGCACGTGCGGAGGCTGGGGG
TGGCGAATGTCACAAGCTTAGAAGAGCGGGACGAGATAAAGAAGAAGCTT
CTACCGTGGACGGAGCACATGAAGCAGGTCTGGAGGCGGCAGCAAACGGA
GCTCGAGGATGCTTCTGGAAGCGGCGAAGATGGCGGCAGTGACCCGTGGT
GGAAGCACGAAGACGGGGATGCTGCCCCAAATGGCGGCGGCGGGAGGCGA
CGAAGCCTGGGCGGCGGACTGAGGCCCGGAGTGATGTTCAGGGTAGGTGG
GCGCTACGTGACGATGGATGCGGTTACGAACGAAGACGCCGCCAAGATGT
CGCCGGACGAGTACACGAGGTTTTACAATCTGGCCGTGAGTCAGCGGGGT
TGAGAACAACATTTTTTTAATTTTTGGGTTGGGTTTCGTTTTTGAGGGAG
GCGAGAGGGTGTTGTGGTCGTTGTGTTGGGACCCGCATCGCTCTTTCACG
TGCGCACTCTTGCGTTCTCGTTTGTATGTTGTTGGATCCCACGAGTTCGC
ATCGGGCGGGGCGTGG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig14:656093..667908+ >mRNA_F-serratus_M_contig14.2894.1 ID=mRNA_F-serratus_M_contig14.2894.1|Name=mRNA_F-serratus_M_contig14.2894.1|organism=Fucus serratus male|type=CDS|length=3180bp|location=Sequence derived from alignment at F-serratus_M_contig14:656093..667908+ (Fucus serratus male)
ATGACGGATATGAGCGCCATCATGGCGCTTCAAAAGGCTGAGAGGCTGGT
GGCCACGGTGGCGAGGGCATTCTATACCGATACCACCGTGCTCGTTGTCG
ATACGCTCCTGCGCGAAAAATGACGGATATGAGCGCCATCATGGCGCTTC
AAAAGGCTGAGAGGCTGGTGGCCACGGTGGCGAGGGCATTCTATACCGAT
ACCACCGTGCTCGTTGTCGATACGCTCCTGCGCGAAAAGTATATCAAGGA
CAGCGACGAGGAGCTGGGGAGCCGGCTCAACCTCAAGCCCCAGCAAGTCC
GCGCCGCAATGGCCGAGCTGCTATCGGAGGGCTTGGCCGCCAAGGAGAAA
ATGTCGGACCAGCTCTACTCTGGCCGGACCAGCGAGTACTGGTTCATCGA
CCTCAGGCACGCCGTAAACGTGATCCTTCTCCGAGTGTGCTACATGAAAG
AGATGCTCTCCCAGAGGCAAGAGGCTAAGGCCGCTCGTCAGGTATATCAA
GGACAGCGACGAGGAGCTGGGGAGCCGGCTCAACCTCAAGCCCCAGCAAG
TCCGCGCCGCAATGGCCGAGCTGCTATCGGAGGGCTTGGCCGCCAAGGAG
AAAATGTCGGACCAGCTCTACTCTGGCCGGACCAGCGAGTACTGGTTCAT
CGACCTCAGGCACGCCGTAAACGTGATCCTTCTCCGAGTGTGCTACATGA
AAGAGATGCTCTCCCAGAGGCAAGAGGCTAAGGCCGCTCGTCAGGTCTAC
GTTTGCCCGAGGTGCCACGAGAAGTTCGAGGTGATGGACATCTGCAAGCT
CTCGAACGGGGACAGCTCCTTCTGCTGCAGCCACTGCTGCCCGAATGACG
ACCATTCCGGCTGCACCAGGGGAAGCGGTTACACCCTCGTAGAGTTCCAC
GATAAGCAGGGGCTTGATACCGTGACAGTTCTGATCGATCTCCTCAACGA
GCAGCTGGGGAAATCGTCGGACCCGTCTACGTTTGCCCGAGGTGCCACGA
GAAGTTCGAGGTGATGGACATCTGCAAGCTCTCGAACGGGGACAGCTCCT
TCTGCTGCAGCCACTGCTGCCCGAATGACGACCATTCCGGCTGCACCAGG
GGAAGCGGTTACACCCTCGTAGAGTTCCACGATAAGCAGGGGCTTGATAC
CGTGACAGTTCTGATCGATCTCCTCAACGAGCAGCTGGGGAAATCGTCGG
ACCCAACCGTACCACGAGAAAGCATCTACGAGCTGATACACGCGCTCCGA
GATACGGTGGTACCGACGAATCTCCCGAGCCAGCTTCGAGAGAGAGGCAT
GGGCGGGCAGCAGCGTGGTGACACCTCCAGCGCGCACGCGCGGTTCGAGG
ACGACTTCCACTATCGCGGCCGCGCGGTAGAGAAGGCGGTGGCGGAACGG
AGCGGTGGAAAAGGAGGTGGTGGCGGCAGTGGTGGAAGGAGCACTTCTTC
CAAAACCGTACCACGAGAAAGCATCTACGAGCTGATACACGCGCTCCGAG
ATACGGTGGTACCGACGAATCTCCCGAGCCAGCTTCGAGAGAGAGGCATG
GGCGGGCAGCAGCGTGGTGACACCTCCAGCGCGCACGCGCGGTTCGAGGA
CGACTTCCACTATCGCGGCCGCGCGGTAGAGAAGGCGGTGGCGGAACGGA
GCGGTGGAAAAGGAGGTGGTGGCGGCAGTGGTGGAAGGAGCACTTCTTCC
AACAAGGCCGTGCAGCTGCTGTACACCAAGAACTGGCGAGGCGAGGAAGT
GGTGGTGGAAATCGAACAGAGCGATGACGAGGACGACGACGAAGACTGGG
ACGAAGAGGCAGCCGTCCTTTTCCCGTCTCGAGCGGCGATCAAGCGGAAG
GCTGCGGAGCAGGCTGCGAAGGAGGAGCGCGCCGCCAAGCGCATCAAGAA
GGCTCTGCCGACTTTCTTGAGCGGGAGCAACATATCCGGCGAGCCCGGAG
GGGGAAGCGGCGGCGGCGGGAGTGTCGTCGGCGCGGGAGGCGAGTGGGAC
GAAGACGACGGCGATTCGTCCGACGAAACCGCCACGAACGGTAAGAGTGG
CGACGATACGGCGGCGGCGCACGTGCGGAGGCTGGGGGTGGCGAATGTCA
CAAGCTTAGAAGAGCGGGACGAGATAAAGAAGAAGCTTCTACCGTGGACG
GAGCACATGAAGCAGGTCTGGAGGCGGCAGCAAACGGAGCTCGAGGATGC
TTCTGGAAGCGGCGAAGATGGCGGCAGTGACCCGTGGTGGAAGCACGAAG
ACGGGGATGCTGCCCCAAATGGCGGCGGCGGGAGGCGACGAAGCCTGGGC
GGCGGACTGAGGCCCGGAGTGATGTTCAGGGTAGGTGGGCGCTACGTGAC
GATGGATGCGGTTACGAACGAAGACGCCGCCAAGATGTCGCCGGACGAGT
ACACGAGGTTTTACAATCTGGCCGTGAGTCAGCGGGGTTGACAAGGCCGT
GCAGCTGCTGTACACCAAGAACTGGCGAGGCGAGGAAGTGGTGGTGGAAA
TCGAACAGAGCGATGACGAGGACGACGACGAAGACTGGGACGAAGAGGCA
GCCGTCCTTTTCCCGTCTCGAGCGGCGATCAAGCGGAAGGCTGCGGAGCA
GGCTGCGAAGGAGGAGCGCGCCGCCAAGCGCATCAAGAAGGCTCTGCCGA
CTTTCTTGAGCGGGAGCAACATATCCGGCGAGCCCGGAGGGGGAAGCGGC
GGCGGCGGGAGTGTCGTCGGCGCGGGAGGCGAGTGGGACGAAGACGACGG
CGATTCGTCCGACGAAACCGCCACGAACGGTAAGAGTGGCGACGATACGG
CGGCGGCGCACGTGCGGAGGCTGGGGGTGGCGAATGTCACAAGCTTAGAA
GAGCGGGACGAGATAAAGAAGAAGCTTCTACCGTGGACGGAGCACATGAA
GCAGGTCTGGAGGCGGCAGCAAACGGAGCTCGAGGATGCTTCTGGAAGCG
GCGAAGATGGCGGCAGTGACCCGTGGTGGAAGCACGAAGACGGGGATGCT
GCCCCAAATGGCGGCGGCGGGAGGCGACGAAGCCTGGGCGGCGGACTGAG
GCCCGGAGTGATGTTCAGGGTAGGTGGGCGCTACGTGACGATGGATGCGG
TTACGAACGAAGACGCCGCCAAGATGTCGCCGGACGAGTACACGAGGTTT
TACAATCTGGCCGTGAGTCAGCGGGGTTGA back to top
|