mRNA_F-serratus_M_contig14.2886.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig14.2886.1
Unique NamemRNA_F-serratus_M_contig14.2886.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: A0A6H5JDW8_9PHAE (FH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW8_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 1.020e-75
Identity = 165/317 (52.05%), Postives = 212/317 (66.88%), Query Frame = 3 
Query:  216 PAPGARRRVFWTAITSGIDKTVFKDIKDEE-VDVPKELLLEGFTERPKQPKKA--VGHDREGEE-IKEGEREEKKPKRESLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTLQPDPGELKTLQGYKGD-VSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKR-IASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLEEAKES 1148
            PA  ARR + W  + + I  T+F++I+ E  VD+PKE +LEGF E+PK PKK   VG D +G               RE LL  KA + YGIVF  V VS +T+R AVMSMDLSFLD + L  L+ L P P E K L  +KGD VSEL EVEQF++L + IP Y++R+R A  +Q+F P+      ++ IV +AI +VT S KLKRLLAVVLAVGNFLNEG+    A AITL+S+L +  V+RTTKR  +GGG++NL H+++EWA+ SEPSLL LGEDLP AA AS+L LD+L+  VL   K   VL   LEEAK++
Sbjct:  720 PAGPARRGLHWNKMRTAITGTIFEEIESEAAVDIPKEFILEGFQEKPKGPKKVGNVGGDAQGTAPAGXXXXXXXXXXREPLLDAKAALQYGIVFSTVSVSPETVRNAVMSMDLSFLDPDTLEKLEKLLPSPAEQKILTSFKGDIVSELAEVEQFLVLATGIPDYEIRLRCAGYIQAFEPERASALEKITIVSDAISQVTNSAKLKRLLAVVLAVGNFLNEGSSNGDAKAITLESLLKITTVRRTTKRPFAGGGDDNLAHSIMEWAAKSEPSLLSLGEDLPLAAKASRLSLDDLKTNVLAVAKKLGVLEATLEEAKKN 1036
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: D8LCH4_ECTSI (FH2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH4_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.580e-55
Identity = 138/293 (47.10%), Postives = 178/293 (60.75%), Query Frame = 3 
Query:  216 PAPGARRRVFWTAITSGIDKTVFKDIKDEEVDVPKELLLEGFTERPKQPKKAVGHDRE-GEEIKEGEREEKKPKRESLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTLQPDPGELKTLQGYKGD-VSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGT-KRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKE 1085
            PA  ARR V W  I + I  T+F++I+ EE                K   + V H  + G  +              L  G +Q           VS +T+R AVMSMDLSFLD + L  L+ L P P EL  L+ ++ D VSEL EVEQF++L S IP Y +R+R A  MQ+F PD     +++ IV +AI +VT S KLKRLLAVVLAVGNFLNEGT    A AITL+S+L +  V+RTTKR  +GGG++NL H+++EWA+ SEPSLL LGEDLP AA AS+L LD+L+KE
Sbjct:  735 PAGPARRGVHWNKIRTAITGTIFEEIESEEA-------------VGKAGGRRVSHVYDHGTHV--------------LYPGWSQRRNRSARSFNSVSPETVRNAVMSMDLSFLDPDTLEKLEKLLPPPAELSILKSFESDDVSELAEVEQFLVLASRIPNYQIRLRCAGDMQAFEPDTASALAKITIVSDAISQVTDSAKLKRLLAVVLAVGNFLNEGTGSGDAKAITLESLLKITTVRRTTKRPFAGGGDDNLAHSIMEWAAKSEPSLLSLGEDLPLAAKASRLALDDLKKE 1000
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 4.490e-49
Identity = 123/310 (39.68%), Postives = 181/310 (58.39%), Query Frame = 3 
Query:  231 RRRVFWTAIT-SGIDKTVFKDIKDEEVDVPKELLLEGFTERPKQPKKAVGHDREGEE----IKEGEREEKKPKRESLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTLQPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKR-IASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLEEAK 1142
            RR V W  I  + +++TVF +I    V++P ELL E F E+PK+ K A   D++ +E            KK +R  LL GK   N GI FK+ R+    LR ++++MDL   D +K   L+ + P P +L TL+GY+GD+ +L EV  FM+LT+ IPRY  R+  A  M+ F  D +F + +L +V  A++EV  S +LKRL+ VVLA+GN+LNEGT+   A AI L S+L L  VK   K++        L+H ++ WA   EP LLL+ +DL  A+ AS   L +L+++V    K F ++   L+ AK
Sbjct:  713 RRPVHWDKIAPANLEQTVFSEIDPSWVNLPTELLAESFAEKPKEKKPA---DKDAKEKXXXXXXXXXXXKKAERVELLDGKTLRNTGIAFKRFRMKPHDLRDSLVAMDLDKFDTDKFIALRNISPSPDDLPTLKGYEGDLDKLDEVTLFMVLTAKIPRYTARLDCALFMKGFSSDADFLSEKLGLVSIAVLEVVDSPRLKRLIEVVLAMGNYLNEGTRNGEAKAIKLASLLKLDTVKTMDKKKT-------LLHVLMSWAKDKEPDLLLMDQDLEHASEASHWSLTDLKQQVTQLTKGFTLMQAQLKMAK 1012
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: A0A835Z2Y1_9STRA (FH2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.460e-31
Identity = 105/309 (33.98%), Postives = 160/309 (51.78%), Query Frame = 3 
Query:  231 RRRVFWTAIT---SGIDKTVFKDIKDEEVDVPKELLLEGFTERPKQPKKAVGHDREGEEI----KEGEREEKKPKRESLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTLQPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGT-KRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLE 1133
            RR V W  +    S  +KTVF +++   V +P E L + F E+P           EGE      K  +   +  K  SLL  K + N GI  K++R+    +   + +M    L  + L  L+ + PDP  L+TLQ YKG+ SEL EV Q +L  S +PRY  R+ S   ++++  D E   +R+++V  A++E  +S  L ++L +VLA+GNFLNEGT K  A  I L S+L L  VK   +++        L+H        S+P +L L EDL     A+ + LDEL++++   R  F V+ + LE
Sbjct:  524 RRLVHWDPLEPTRSSFEKTVFTELQPNSVPLPVEKLRDAFEEKPPA---------EGETAAVPAKISKAAAQAAKARSLLDAKTKQNVGIALKRLRMKPAKVIEEIYTMSDRTLTTDNLLALREMAPDPSLLRTLQNYKGEPSELDEVTQLLLAISKVPRYTARMDSTIFIRAYVEDAERIEARVKMVHMAVMEALESKHLPKVLEIVLALGNFLNEGTSKGDAKGIKLASLLQLETVKTLDRKKT-------LLH--------SQPEVLELEEDLENCKEAATIGLDELQQQINQLRLGFKVVKEQLE 808
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 7.600e-22
Identity = 86/301 (28.57%), Postives = 147/301 (48.84%), Query Frame = 3 
Query:  231 RRRVFWTAITSGIDKTVFKDIKDEEVDVPKELLLEGFTERPKQPKKAVGHDREGEEIKEGEREEKKPKRESLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTLQPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLE 1133
            RR++ W  I     +       + EV    ++ LE F E   +  + V   ++ EE K+ + +++ PK  SLL GK  MN  I   +++++    R AVM+MD + L  N L  L+   P   E KTL  Y GD + L   E+FML    +P+ ++R++     Q      +   S   +++ A ++V  S +LK+LL ++L +GN LNEG     +  TL S+L L   K   K+ +       ++H +V  A  ++P+LL   +DL     AS+L +  +  E+    K +    +++E
Sbjct: 3074 RRKLHWKTIPHARLQKAESIWMETEVATDIQIDLEEFEELWVEKAEKVAAKKKLEEAKKKDVKKEAPKEISLLDGKRAMNTSIAIARIKMTYAETRQAVMNMDETVLSSNVLQSLQEFMPTKEEEKTLLNYNGDPALLGNAEKFMLEMIKVPKREMRLKGMLFKQLLQARQDDMRSMAGLINSACLDVRLSRRLKKLLGIILKLGNQLNEGQ---TTGFTLDSLLKLNTAKAFDKKTS-------ILHYLVMLARRNDPTLLDFKDDLKHVFPASRLLISTVTAELADLNKGYASFKRLVE 3364
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: D8LT97_ECTSI (Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT97_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.180e-21
Identity = 85/301 (28.24%), Postives = 147/301 (48.84%), Query Frame = 3 
Query:  231 RRRVFWTAITSGIDKTVFKDIKDEEVDVPKELLLEGFTERPKQPKKAVGHDREGEEIKEGEREEKKPKRESLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTLQPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLE 1133
            RR++ W  I     +       + EV    ++ LE F E   +  + V   ++ +E K+ + +++ PK  SLL GK  MN  I   +++++    R AVM+MD + L  N L  L+   P   E KTL  Y GD + L   E+FML    +P+ ++R++     Q      +   S   +++ A ++V  S +LK+LL ++L +GN LNEG     +  TL S+L L   K   K+ +       ++H +V  A  ++P+LL   +DL     AS+L +  +  E+    K +    +++E
Sbjct: 2202 RRKLHWKTIPHARLQKTESIWMETEVATDIQIDLEEFEELWVEKAEKVAPKKKLDEAKKKDVKKEAPKEISLLDGKRAMNTSIAIARIKMTYAETRQAVMNMDETVLSSNVLQSLQEFMPTTEEEKTLLNYNGDPALLGNAEKFMLEMIKVPKRELRLKGMLFKQLLQARQDDMRSMAGLINSACLDVRLSRRLKKLLGIILKLGNQLNEGQ---TTGFTLDSLLKLNTAKAFDKKTS-------ILHYLVMLARRNDPTLLDFKDDLKHVFPASRLLISTVTAELSDLNKGYASFKRLVE 2492
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: A0A6L5CVX2_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CVX2_9INSE)

HSP 1 Score: 107 bits (268), Expect = 1.530e-20
Identity = 78/260 (30.00%), Postives = 132/260 (50.77%), Query Frame = 3 
Query:  363 KKAVGHDREGEEIKEGEREEKKPKRESLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTL---QPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLE 1133
            K  V +D   E++++     K+ K  S++ G+   N  I+  K+++S D +  +++SMD    ++  L M++ L    P   E   L+ +  D   L   ++F+   S IP Y+ R+RS    + FGP V   T R+  V EA  EV +S +L++LL +VLA+GN++N G +  AS   L S+  L + + +     +      L+H +VE   V    +L L ED+P    A K+ L EL K++   R     +G+ +E
Sbjct:  693 KNGVANDGSNEDLRQTGN--KRNKTLSVIDGRRAQNCTILLSKLKMSDDEITKSILSMDRG--EQLPLDMVEQLLKFTPSAEECALLEEHSEDADSLARADRFLYEISRIPHYEQRLRSLHFRKKFGPLVSEVTGRVRAVLEASREVQRSRRLRKLLELVLALGNYMNRGARGNASGFRLGSLNRLADTRASLPARPT----TTLLHYLVEVIEVKFKEILKLEEDIPHVKEACKVNLGELEKDMGQLRMGLRDVGQEIE 944
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: A0A1B0CAZ8_LUTLO (Uncharacterized protein n=2 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A1B0CAZ8_LUTLO)

HSP 1 Score: 107 bits (266), Expect = 3.380e-20
Identity = 73/241 (30.29%), Postives = 122/241 (50.62%), Query Frame = 3 
Query:  441 SLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSF-LDENKLGMLKTLQPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLEEAKESMGPE 1160
            S++ G+   N  I+  K+++S + +  A++SMD S  L  + +  L    P   E   L  +  D+  L   ++F+   S IP Y+ R+RS    + F   V   + RL  V EA  EVT+S +L++LL +VLA+GN++N G +  AS   L S+  L + K ++ +  +      L+H +V+        LL L EDLP    ASK+ L E+ K++   R     + + +E  + S  P+
Sbjct: 1725 SVIDGRRAQNCTILLSKLKMSDEEISKAILSMDSSEQLPIDMVEQLLKFTPSAEERALLDEHTEDIESLARADRFLFEISKIPHYEQRLRSLHYKKRFHVTVNEVSPRLTSVMEASREVTRSRRLRKLLEIVLALGNYMNRGARGNASGFRLASLNRLADTKSSSVKGTT------LLHYLVQIVEKKFKDLLKLDEDLPHIREASKVSLGEMDKDISMLRSGLAEVTREIEFQRSSGSPQ 1959
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: A0A482XFH6_LAOST (Uncharacterized protein n=4 Tax=Delphacidae TaxID=33362 RepID=A0A482XFH6_LAOST)

HSP 1 Score: 103 bits (258), Expect = 2.350e-19
Identity = 71/234 (30.34%), Postives = 121/234 (51.71%), Query Frame = 3 
Query:  441 SLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTL---QPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLE 1133
            S++ G+   N  I+  K+++S + +   ++SMD    DE  L M++ L    P   E   L+ +  ++  +   ++F+   S IP Y+ R+RS    + F   V     R+  V EA  EV++S +L+RLL +VLA+GN++N G +  A+   L S+  LV+ K ++ +  +      L+H +VE        +L + EDLP    ASK+ L EL K++   R N   + + LE
Sbjct:  684 SVIDGRRAQNCTILLSKLKMSDEDISKVILSMDSR--DELPLDMVEQLLKFTPSAEEAALLEEHAEEIDNMARADRFLYEISKIPHYEQRLRSLHYKKRFTVWVAEIEPRVRAVMEASREVSRSRRLRRLLEIVLALGNYMNRGARGNATGFRLASLNRLVDTKSSSAKGTT------LLHYLVEIVDKKFKDILKIEEDLPHVREASKVSLGELEKDMAQLRNNLKEVERELE 909
[Close]
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Match: A0A1B6H9V9_9HEMI (Uncharacterized protein (Fragment) n=3 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6H9V9_9HEMI)

HSP 1 Score: 103 bits (258), Expect = 2.480e-19
Identity = 72/234 (30.77%), Postives = 120/234 (51.28%), Query Frame = 3 
Query:  441 SLLGGKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTL---QPDPGELKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFTTSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKRIASAITLQSVLNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASASKLKLDELRKEVLTCRKNFLVLGKMLE 1133
            S++ G+   N  I+  K+++S + +   +MSMD    D+  L M++ L    P   E   L+ +  ++  L   ++F+   S IP Y+ R+RS    + FG  V     R+  V EA  EV++S +L+RLL +VLA+GN++N G +  A+   L S+  L + K +  +  +      L+H +VE        +L L EDLP    A+K+ L EL K++   R N   + + LE
Sbjct:  688 SVIDGRRAQNCTILLSKLKMSDEDISKVIMSMDSR--DQLPLDMVEQLLKFTPSSEEAALLEEHSEEIDNLARADRFLYEISKIPHYEQRLRSLHYKKRFGVWVNEIEPRVRAVMEASREVSRSRRLRRLLEIVLALGNYMNRGARGNATGFRLGSLNRLADTKSSACKGTT------LLHYLVEILEKKFRDVLRLEEDLPHVKEAAKVSLGELEKDMAQLRNNLKEVERELE 913
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig14.2886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDW8_9PHAE1.020e-7552.05FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LCH4_ECTSI1.580e-5547.10FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FPH1_ECTSI4.490e-4939.68Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A835Z2Y1_9STRA3.460e-3133.98FH2 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JR06_9PHAE7.600e-2228.57FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LT97_ECTSI2.180e-2128.24Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6L5CVX2_9INSE1.530e-2030.00Uncharacterized protein n=1 Tax=Ephemera danica Ta... [more]
A0A1B0CAZ8_LUTLO3.380e-2030.29Uncharacterized protein n=2 Tax=Lutzomyia longipal... [more]
A0A482XFH6_LAOST2.350e-1930.34Uncharacterized protein n=4 Tax=Delphacidae TaxID=... [more]
A0A1B6H9V9_9HEMI2.480e-1930.77Uncharacterized protein (Fragment) n=3 Tax=Homalod... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig14contigF-serratus_M_contig14:531247..540734 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score212.2
Seed ortholog evalue4.8e-52
Seed eggNOG ortholog2880.D8LCH4
KEGG koko:K11238
KEGG Pathwayko04011,map04011
Hectar predicted targeting categoryother localisation
EggNOG free text desc.actin binding
EggNOG OGsKOG1922@1,KOG1922@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Exons7
Model size1843
Cds size1317
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929382.3674438-UTR-F-serratus_M_contig14:531246..5312481622929382.3674438-UTR-F-serratus_M_contig14:531246..531248Fucus serratus maleUTRF-serratus_M_contig14 531247..531248 +
1690962826.1992378-UTR-F-serratus_M_contig14:531246..5312481690962826.1992378-UTR-F-serratus_M_contig14:531246..531248Fucus serratus maleUTRF-serratus_M_contig14 531247..531248 +
1622929382.5007858-UTR-F-serratus_M_contig14:540210..5407341622929382.5007858-UTR-F-serratus_M_contig14:540210..540734Fucus serratus maleUTRF-serratus_M_contig14 540211..540734 +
1690962826.2782667-UTR-F-serratus_M_contig14:540210..5407341690962826.2782667-UTR-F-serratus_M_contig14:540210..540734Fucus serratus maleUTRF-serratus_M_contig14 540211..540734 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929382.3856153-CDS-F-serratus_M_contig14:531248..5315541622929382.3856153-CDS-F-serratus_M_contig14:531248..531554Fucus serratus maleCDSF-serratus_M_contig14 531249..531554 +
1690962826.2095435-CDS-F-serratus_M_contig14:531248..5315541690962826.2095435-CDS-F-serratus_M_contig14:531248..531554Fucus serratus maleCDSF-serratus_M_contig14 531249..531554 +
1622929382.4065673-CDS-F-serratus_M_contig14:533126..5333141622929382.4065673-CDS-F-serratus_M_contig14:533126..533314Fucus serratus maleCDSF-serratus_M_contig14 533127..533314 +
1690962826.217483-CDS-F-serratus_M_contig14:533126..5333141690962826.217483-CDS-F-serratus_M_contig14:533126..533314Fucus serratus maleCDSF-serratus_M_contig14 533127..533314 +
1622929382.420839-CDS-F-serratus_M_contig14:533797..5339511622929382.420839-CDS-F-serratus_M_contig14:533797..533951Fucus serratus maleCDSF-serratus_M_contig14 533798..533951 +
1690962826.2253509-CDS-F-serratus_M_contig14:533797..5339511690962826.2253509-CDS-F-serratus_M_contig14:533797..533951Fucus serratus maleCDSF-serratus_M_contig14 533798..533951 +
1622929382.433702-CDS-F-serratus_M_contig14:537334..5374751622929382.433702-CDS-F-serratus_M_contig14:537334..537475Fucus serratus maleCDSF-serratus_M_contig14 537335..537475 +
1690962826.233117-CDS-F-serratus_M_contig14:537334..5374751690962826.233117-CDS-F-serratus_M_contig14:537334..537475Fucus serratus maleCDSF-serratus_M_contig14 537335..537475 +
1622929382.447607-CDS-F-serratus_M_contig14:537996..5381271622929382.447607-CDS-F-serratus_M_contig14:537996..538127Fucus serratus maleCDSF-serratus_M_contig14 537997..538127 +
1690962826.2452374-CDS-F-serratus_M_contig14:537996..5381271690962826.2452374-CDS-F-serratus_M_contig14:537996..538127Fucus serratus maleCDSF-serratus_M_contig14 537997..538127 +
1622929382.468833-CDS-F-serratus_M_contig14:538689..5388521622929382.468833-CDS-F-serratus_M_contig14:538689..538852Fucus serratus maleCDSF-serratus_M_contig14 538690..538852 +
1690962826.2566974-CDS-F-serratus_M_contig14:538689..5388521690962826.2566974-CDS-F-serratus_M_contig14:538689..538852Fucus serratus maleCDSF-serratus_M_contig14 538690..538852 +
1622929382.482517-CDS-F-serratus_M_contig14:539976..5402101622929382.482517-CDS-F-serratus_M_contig14:539976..540210Fucus serratus maleCDSF-serratus_M_contig14 539977..540210 +
1690962826.2707767-CDS-F-serratus_M_contig14:539976..5402101690962826.2707767-CDS-F-serratus_M_contig14:539976..540210Fucus serratus maleCDSF-serratus_M_contig14 539977..540210 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig14.2886.1prot_F-serratus_M_contig14.2886.1Fucus serratus malepolypeptideF-serratus_M_contig14 531249..540210 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig14.2886.1

>prot_F-serratus_M_contig14.2886.1 ID=prot_F-serratus_M_contig14.2886.1|Name=mRNA_F-serratus_M_contig14.2886.1|organism=Fucus serratus male|type=polypeptide|length=439bp
MPPPLPGSSIPLPPPLPRSLIPPPPPLPGTSIPMPPPLPPKGTAAVGDQG
PAALAPPLRMPPLVNVASRFVPAPGARRRVFWTAITSGIDKTVFKDIKDE
EVDVPKELLLEGFTERPKQPKKAVGHDREGEEIKEGEREEKKPKRESLLG
GKAQMNYGIVFKKVRVSLDTLRTAVMSMDLSFLDENKLGMLKTLQPDPGE
LKTLQGYKGDVSELLEVEQFMLLTSLIPRYDVRIRSADIMQSFGPDVEFT
TSRLEIVDEAIIEVTKSHKLKRLLAVVLAVGNFLNEGTKRIASAITLQSV
LNLVNVKRTTKRENSGGGEENLVHAMVEWASVSEPSLLLLGEDLPRAASA
SKLKLDELRKEVLTCRKNFLVLGKMLEEAKESMGPEELKKREERKRLKER
KERRAKERKAKERKRLKECQEKLEELLASQRYHRAEGI*
back to top

mRNA from alignment at F-serratus_M_contig14:531247..540734+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig14.2886.1 ID=mRNA_F-serratus_M_contig14.2886.1|Name=mRNA_F-serratus_M_contig14.2886.1|organism=Fucus serratus male|type=mRNA|length=9488bp|location=Sequence derived from alignment at F-serratus_M_contig14:531247..540734+ (Fucus serratus male)
CGATGCCTCCCCCGTTACCCGGGTCTTCAATTCCGTTGCCTCCTCCTTTG
CCTAGATCGTTGATACCGCCACCGCCACCATTACCAGGGACATCGATCCC
GATGCCACCCCCTCTTCCGCCGAAGGGGACAGCTGCGGTGGGTGATCAGG
GGCCCGCGGCCCTCGCCCCCCCTTTGAGAATGCCTCCTCTAGTAAACGTT
GCAAGTAGGTTTGTGCCCGCGCCAGGCGCGAGGCGACGCGTGTTTTGGAC
GGCGATCACCAGCGGGATAGATAAGACGGTGTTCAAGGACATCAAGGACG
AAGAAGTGGTGAGCGAAAAATTTCAGAGAGTTGGTTGGTTGACCACGCAC
GTCTTGATGCCGTGACAATTTTGGTGTGCGCCTTGCTTGCTGTTTCTAGA
TGCCTTTGATGCCTTGATACCTTGCTTGCTCTACGCGCCAGTATTCTATA
ATAATAGCATATAATTTCCCGTGTAATGTCCTTGTTCGGTACTGTAACAT
TTCAAGAAGCGTGTGAGGCCGTGTGTCTGGTGATAGAGGGAAGCAGGACG
TGATGGTTCTTCAACAAACTGGTCATCGCCTGTTATACTGTCTATTTTTT
CGACTTGAAAATATTTTGACTTTTTTTTATCTCGATTATTTTTTGTCCTG
TTATTGATATATTCAATCTCAAGTCAATAGTCAATATCTCTAGGCTCTAA
TTTACACAACCTTTGACAGCCAGAAATAACTTGACACAGACGGCGAATCG
GCGTTGTTGAACATGTATTTACCATTTATATATAAACAAAGTAAGGCGAG
TGCTGTCGGGACGTACGGTTGTTAGAAGCGTTAGAAGAGCTCCGGTGGCC
ACAGGATTCGAAGAAATGCGGTGTTGCGACCTGTCACCCTGTCGTATCCA
TGGGCCGCCGTCGAAGCAGAGTGACATCACGCGTGGCGTCACTCTGACGC
ACGCATCTCTTGGTGACGTCACCTATGCTGTGATTTGATATTCAGCTGTT
CTGAAAATATATTTTCACTTTCTCCCCCTCGATTGGAAGAATTTTTTTAT
TGATTGCTTGATTGGCCCTGCTGATTAGTTCTATGATTGCATTCGGTGCA
TGGACGAATCGTTGGCTGATTTTTGGATGGGTTGATGAATGGATATTAGA
CATATGACGAATCGTTCGAATTATTGAAGATGTAGGTCGATTGTTCATTT
GTATGAGATCCGATGGTTGGATGTTTGAGTGTTTGGGTGTTTGGATGTGG
GCTGTTTGGGTGTTTGGATGTCACGGATGATGAAAATGTGTTGTACGCTG
AAAAGTGCCAAGATTTATTAGATTTTGGTTTTTGTTTGTTTTGTAAGTGC
GTTGGAAAGGCCCGTTTGGTTGCCCGATGACCAATGACCCCACTTTTCGA
GTGATTTATTAGACGAAGGACTCGCACGTGCAATATATAAAAAATATATG
TGTGTGTATGTATGTATGTACTTGTTTTATCTATTTATTTAATTGCACAG
TATCGCGCAATCCGGCCCTGTCATCCTATTAATATTAGTAGTCATAATAT
TAATACTATAAATATACCAAAGGGTGTTATTATTAAGGGATCGATGGCGC
GTGTTACGAAAACCTCTGGTCAGACGCGACAAATGGAACATGTTTCCTCT
AGAGTTATTCTAGAGTTATTATTCAAGCCCTCAGCGCCTTGCGTTTCCCT
CTTTATGCCCCCTTGCCATTTATTCTCTAGATAGCCTCGGCCGGCACCTG
CTGAAGAACTAACGTATTTTTTTTTACTCCTTCCAATACCCAATTTCCTC
CCCCCACGTTTATCCACATCGCCTCTAAAACTCTTTTTCGTATGATGTAT
ACATATATATATATATAATATATATTACAGGATGTGCCAAAAGAGCTACT
GCTGGAAGGGTTCACGGAGCGACCGAAACAGCCGAAGAAAGCCGTCGGTC
ACGACAGAGAAGGCGAGGAGATCAAGGAAGGAGAGAGAGAGGAAAAAAAG
CCCAAGCGCGAGTCGCTCCTCGGGGGAAAGGCGCAAATGAACTACGGTAT
CGTCTTCAAGAAAGTCAGGTAGGTACTGTACGGTACTGTACTGTACTGTA
CTGTACACGGACGAGATACCAGCTGACTCTTTTACCATATAAAGACAAAG
GCAGGCACATGGGGTAGGGGGGGGGGGGCGTCAGAAATTGTATACATGGG
GTGTATGGGGAGGGAGGGCGTGTAACGTTTTGTGGTCCGGTATGTCACGT
GTCAGCATCGCGGTGAGGCGcGGGGAGCtCTTTTTCTTGGGTATGGACAA
TGGCAACAGTATTTCACTCAAACGCAATAAGTGTATGACACAGTACAGTA
GTAATGACAACCAGCACCAAAAACAACGGAAGATAAAAAAGCTTACAAAG
TGTGAAGAAAATCCCCCAAAACGCATGAAAAAAACAATCACAAAAGCACT
AAAAAAAGCACAAAATAAAGCACAAAATAAAGCACAAAATAAAACAAAAC
CACGGCGCCGTCCTCGCTCGCCGTCGACGAACGTCAAACCACGTCCAACA
GGGTTTCCCTGGATACGCTGCGCACGGCGGTGATGTCGATGGACTTGTCC
TTTCTGGACGAGAACAAGTTGGGAATGCTCAAGACGCTTCAGCCGGACCC
GGGCGAGCTCAAGACGTTGCAGGGGTACAAGGGCGACGTCTCCGAGCTCT
TGGAGGTATGATATAGCGGTTCGGTGGTGTCCCTCACCCCCCACCTCCCT
CCGTCACGCATGATATACACCCTTGATAACATTAAACAATACTCAAAAGG
AGATGCATACTTTAAAATACTATTAATACCAATACTTGCGTTCTGTGCTG
TGAATACTAATAATAGGCTAAAAAGAGAAGCGTATCACCCCGGGGGTGCT
ACCCTTTTATCACCCCGGGGTGATCGATACTTTTCATTACCCCGGGGTGA
TCGATACTTTTTATTACCCCGGGGTGATCGATATTTGTTATTACCCCGGG
GTGATCGATACTTCCATCCCCCCGGGTGATCGGTACTTTCATCCCCTCTA
GGGATGTGAAAGATTTTCATCACCCTTGATCATCAAAATTATATACTACC
TGGTATTAATGTATTAATAGCTACCAGGTATAGATGTGTATGTTGTTGTT
GATTCACTCATTCAGCGTATTGTCCTTGCAATTGAAGAAACTACGGTGAC
ACAACGAGTCAGCCATAGACCTATCAAATGCCAATCCCGCTTGTGGTCAC
TAAAGAGGTACAGAGGTCAACGGGTCAACCGGTCACCGGTACTTTGAACA
TGTCCTTCGTACTAATAGTGGGTGTGGGAAAGAGAGGCGTAATTAATTGG
TCCATGGTGACCTGCTAAGGCAGCACCCGTTCGGAACTACCTTGAGGTTT
ACTGGCCCTGTGCCGGTAGACTCTCGGCAGTGAACGCCACCGGTACGCAA
TTGCGTGACCCGATAAACTCGGGACTGACCCGATGGCGAGTGGCGGTTCA
AATAAATAAATGGACGCCGCCGCGGAACTCGGGAGGAAGCCCGTAAGTAA
GCACCAGATTCAGCCTGAGTATGCTGACCCGGGACGAGACTGCCGAACCT
GTCTCGCGAGACCAAATTCTGAGGTGCGAACGCAAACAGGTATAAGTTCA
TTCCCCTGTTCAGCTGACCGTGAGCAGGATTGGCAACCTTACAGGGTTGA
TCATTACCCTTGCTATATGTGTCACCATTTATATAGATGTGCGACCATCA
TGGTGACAACCCGTTACTCCGATCAACGGGGATCCAAATCGCGACAAAAT
TCTTGCCAGGTCCAACCGACCGAGAACATTGGAAACTTGTCGGCGTCAAG
ACGATGTCTTTGGGTACAGACTACAGTTTCTGCTGTCTGGAGTGCTGCTA
CAGTTTCTACTGTCTGGAGTGCTGCTACAGTTTCTACTGTCTGGAGTGCT
GTTAATACTATGCTATAACAGTAACAGTTTTTCAGAATCTGGATTTCAAC
TCTGTCTGATGTGCTGCCCATCCTCCGAACAAAGTACATCGAAAGGGATA
CAAGAAGTTTTCCAGCTCTTACTATTGGAGGGTTGCATGGGGGCAAGTCA
TGCGACACTTTACAAGCAATGGCGCACCGACCAATGTCAAAACGGCCCAT
CAAATCTCCTTACTCCATGTCGAGAGCAACCTCGGTCGACTCGATTTTTC
TGTCGCCTACCCACGGCCAGCGTTCTTAGCTACAAAGCGGACAAATCACG
CTCCGATCAGTTTTGATCGACAGACCCTAGCTTCTCAAGGCCACACATTA
ATATATATAAATATATATTATAAGGAAAAATGAAATACTTGAGCTAGTGA
AGCCGGCGCGCGAGCCAGCATCCAGCCGTCGAAAGCCCCGTGCATCCCTG
AAAAACTCTCCATGAGTATTGCCCGTTCGTGGCCCCTTCTTGGCCCTCGT
AGAACGAAAACAGACTGTGGATCCGGGCCTTGTAGTTTGGTCGCGCGGCG
TGGGCTCAGTCGTCCCACCCCGCGTCGCCCCTCCCATCTTCCGTTCCCGG
AGCGAATCTGGTGCTTACTCACAGGCTCCTCTCCTCCCTCCTGCCTTCTG
TAGCGGTACGCCAGTTTTGGTCCCATGACCGTTAGTACGAACGGTCTGGC
TTGCGGATTCGACCGGCAGTGCACCGCCTACGAACATCGGATATGCCGTT
GGCTGGTCATAGCACGCCTGGCCTCCTTACCATCTCCTCACTTCCACGGT
TTGGGTCCACCCCGGCCGCGAGGCACAGCCAGGACAGGGCGTGCATGGTG
ACTTGGGACTGACCCAAAGTTGCTTGACGGTTTAAATAAATAAATGGACG
TTGTCGTGGAAAGCGGGAGGAAGGAGAGGAGCCCGGTAGCAAGCACTATG
TTCAGCCTGGGTGTGGAGAATGAACGGGCTGGCGCGAGCGAGACCAAATT
CTCAGGCGCGAACGGGGACACAGGGAGACATTGCTTTCTCCGTATTCTGC
TGAATATCATGACCATGATTTGATTGGTTGACTGAATTCTCACGTAAGCT
GATGTAAAAAATCCAGCCCGTGGTCACAAGGTGGAAAAACACCAGCATTC
GGAAGGAAAGAACGTATGACGTTCTCTCTCCATACAAATATAAAGCGGAA
ATGGTTACAAAAATACTCGGAAAAAGCGACATCTCCAAAATAAACAAAAA
GCAAAATTTAAAAAGAAACACGTGTGGCTATCGGGGCGCCTGCATATCGA
AGGACGATTGAACAAAGGGCCGCGGCTTCAACGAACGTATGACGTACTCT
CCATACAAATATAAAGCGGAAATGGTACAAAAATACTCGGAAAAAGCGAC
ATCTCCAAAATAAACAAAAAGCAAAATTTAAAAAGAAACACATGTGGCTA
TCGGGGCGCCTGCATATCGAAGAACGATTGAACAAAGGGCCGCGGCTTCA
ACGAAAGCGTAGAGACGAAAACGAAGCAAAACAAAACAAACGTAACACCA
GAGAAAAACGTCATGGTATCTGCAAATCAAACGCCCGGAGGATACAAGTT
CGCGCCACTTGTGGCTAGTCAACAAGGGCGAGCGACGAACCAGCACGAGC
CCGCTTGCTTTGGGCTATCCTCTTCTTGGTCCTTCCCGTCACGTTCGGGT
ATACCACTGCATACCGTAGTCCAGCTTTGGTTTTCCCTTGTTCTGCCGTT
CTGCGCCATTTCCCCTCGTCCTGGGCTGCAGTCGTCCACTGGTCGGCGTT
GATGCCGAACGCTCTGATATGGTCCAGGAAAATACATACGTATGTAGTCG
AATTCCGGTTCCCCTTTGGTCTTTTTTGTTTTGTTTTTGTTTTCTTGAGG
CGCTATTAATAGGGGACAGATAGGTGGGGATTGGTCCATGGTGCAGGGAC
ATCAAAGGTCTAACCTTCGTCCCCCCTTGCAAGACTCGCAACCCCGCTCC
CAACACGCCTCGACGATCCGGGTATTGAACTCCCCCCCCCCCCATCCTTC
CCCTAAAATTGCATATTAGCGTTGTTGTGACCCGACCGATGCATACCCCT
TGGGGACTGGTTGGTGGGTTGGTGTTGGATCGAGACAGGTCGAGCAGTTC
ATGCTGCTTACGTCTCTGATACCACGTTACGACGTTCGAATACGGAGCGC
GGACATCATGCAGTCCTTCGGTCCAGACGTGGAGTTCACCACCAGCAGGC
TGGAGATAGTCGACGAGGCTATCATAGAGGCAAGAGGAGATAACTAACTA
TATGGGAAGTGACATGCTTTCTGTGAGATGCAGGCCGTAGAAAGATCAAT
GCACTGCGGCTGTTGTAGGGAGGGCAAGGGGGGGGGAAAGTATTTTGTTG
GAAGGGGGATTTGCCGTACGGGGGCTTGCCAGCACCACATAATCGTGAGT
TCTCACCCCAATGTGTGTACCAAGATCCTCGAGTTTTTTTTCTTTCTGAG
CAGTAACGTTTACGGTTGGTCCAGTATTCCGGTGCTCTGCCGATAATTGC
ATGCCCAACAGCGTTACTGATTACGATTCGACGTCGACCGTGCTGTGTGA
TGGTTGGTATTTGTGTATTTTGAACCTCTCGACTCGACTCGAAAGAACGC
TTCTGAAATTGATGGGACTGTTTTTGTCAGAGGAGGGGATATATCTTCCC
CCCCCCCCCCCACCTGTTCTTCTTAACAGTCATGAGTGAAAACATATGGT
GACATTTTTTTTAGTAGTGCCTTTGTGCGTTGCAAATGTGCTCTCCGCAG
GTGACCAAGTCGCACAAGCTGAAGCGGCTCCTGGCGGTGGTACTGGCTGT
GGGAAACTTTCTGAACGAAGGGACGAAACGAATCGCGTCTGCGATCACCC
TCCAGTCCGTCCTGAACCTCGTCAACGTCAAGTTAGTCGCCACACACTGT
ACATAACCGGGAAAAAAAATCTTGGGAGGCGTTCGAATTACTCGACTTGA
CTTCATTCATAATTTATATATATATAATTTTATATATATATAATGAATTA
CTATTATAAAGATTACTTAGATTACAAGGGCAAAAAAGCAGTACCAACAG
TTTCAACCCGATGGGTCATTTTTTTCTTCTAAAAAGTGTGTATGCTGGAC
CGAAAACGCCGCGACTATTACGAAGCGAGAGATGTACTTGAAAATATTCA
CTGTACGAATAACGCCTCATTTCTCCGCTGAATACATTGATAAGTTTACT
ATATATATAGACTAGCCCTTTCCATGCTGTACCCTGCTTAGACTCGGAAA
TATATAACTCGAAAAAAACCGTCGCTTATTTTCAAAAGACTGTGTTAGAT
CTTTCTGAGTTGTCGCTGTTGATGTTGTCTTCTTTCCCGCGGAGGATGAC
AACACACTTGCTAATTAAAAGGCGTTTTTTTCTTTTGGGGTGGGGGGGAT
CGGGGTTATGGGGGACGTGGGGGTGGGGGGGGGGGGTGAACAGGCGTACA
ACGAAGCGGGAGAACTCCGGAGGCGGCGAGGAGAATCTGGTCCACGCCAT
GGTGGAGTGGGCAAGCGTTTCGGAGCCATCGTTGCTCCTCCTGGGAGAAG
ATCTGCCAAGAGCTGCCAGCGCGTCGAAGCTTAAGCTCGACGAGCTCCGA
AAAGAGGTGCGTTGGAGGTACAGCAGTTGGGTTCGGAGAGGCGGGGGAGG
CACCCCCCCCCCCCCCCCTCCCACCCCACTCACAGTACCTACGTACACGC
AGCTCCATCCCCTCCCCCTGAAGACGCGTTATGCTTGTATACATGTATTT
TTTATTTTCTTCAAGAATGTTTGTGTAGGCAGGTGGATTGTACGGCAACG
TTTGGATATTATACAACAATAAGCGTTTGTATTTGATTTATCCTTGTCAG
AATCTGGTCGTGGGGGAGGGATTTCCTTGTGTATAGAGCGGCGTTACTAC
ATCGACGGGCATCGATTTTTCCTCTGGTACCATACACTCTGCGCTTCTGT
TCATGCTCGAATAATTCCCAGTTGTTTACAGCTTTTTTATATTTTTATCA
AGTGGTTGCATTCTGGTTTTCAGTTTTCATAGCAAAAGAGGAGGCGTTTG
AGGTGTCTCACGAAAAAAGGAAAACGCAAAAGAGGAGGCGTTTGAGATTT
CTCACGATAAAAAGGAAAACGAAGGTGTGTACACGTCGTCGACCGCTTCT
TGTCTCTCTAATGCCTTGCGTCGTTGTGTTCGAGTGTGTTTGTTTTGTGT
TTGTGTCTGTGTTTGTGTGTGTGTGTATATGTTTGTGTGTCTGTGCGTAT
GTCTGTGTGTGTTTATGTGTGTGTATTTATTAAATTGAACATAACCACGC
AATCCGATCCTGTTATCTTAGTGTGTGTGTACACGGTATTGCTCTTGACT
TGAGGTTACACCTGAGGTTACTTCTATCTGTTGGGACGATTGGTTTTTGA
AGAAAATGCAGAACGCACCTAGACCTTCTGAGCGATTGGTGTTTTACTTG
AGGTTATAATGTTATAAAATTAATTGTACGCTTGAAAAATAAAACACAAA
AAACGAAGCCAAAGATGAAATGTTCGTGTAGCCAAAACTGAGAGTGTTAC
AAGATTCTTGTGGCTCTGCGTAGGGAAGCGAAGGAGGATTTGCTACACTG
ATGCAATGTCGATCTCGATCTATCGATCAGTGTTAGCTCGTTATCATCCC
CTGTCCCTCTGTCCTCTCTCGACCCCCCCCCCCCCCCCCCCCCCTGCATC
ACCAAATATAAACGCCTCTGGCTGTGAAAGGTGTTGACTTGCAGGAAAAA
CTTCCTAGTGTTGGGTAAAATGCTCGAGGAAGCCAAGGAGTCCATGGGCC
CCGAAGAGCTCAAGAAGCGCGAAGAGCGCAAACGGTTGAAAGAGCGCAAG
GAGCGGAGAGCGAAGGAGCGGAAAGCGAAGGAGCGGAAACGGCTGAAGGA
ATGCCAAGAAAAGCTCGAGGAGCTCCTCGCGTCCCAAAGATATCACAGAG
CCGAAGGAATCTGAAGAACCCGATGAGCTCCAAGACCCCGAAGAATCAAA
GGAGTCCGAAGAGCGTGAGGAATCCGACGATTTCAAAGAGCAGGAGGAGC
CTCAGAAACCTGGCGGGTCGAAAGAGCTCGAAGAGCCTGAAAAAGAGGAG
GGGCTCGAAGAGCCCGAACAGCCCAGGGAAGCTGACGAGCCCGAGGAAGC
CGACGAGCCTGAGGATAGCAAGGAGCACGAACAGTTGGAGCAGCCTGAGA
AACCCGAAGAGGACGAGGATTCCAGAGAGCCCGAACGGCCTAAAGAGAGC
GAGGAGCCCCGACAGCCGGATGAGGGCGAGGAGCGCAAAGAGTCTGACGA
TCCCAAAGAGTCTCATGAGCCGAAAGAGTCTGATAAACCCGAAGAGTCTG
ATGAGCCCAAAGAGTCCGATGAGCCCAAAGAGATCGAAGGGCCCGAGGCG
CCCACGGAGGTCGAGGAAGACACTGACTCTGACTCTGGCTTCTTGTCACC
ACGATCATCCCCACCTTTAGAAGAAGAGGAAGAGGAAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig14:531247..540734+

>mRNA_F-serratus_M_contig14.2886.1 ID=mRNA_F-serratus_M_contig14.2886.1|Name=mRNA_F-serratus_M_contig14.2886.1|organism=Fucus serratus male|type=CDS|length=2634bp|location=Sequence derived from alignment at F-serratus_M_contig14:531247..540734+ (Fucus serratus male)
ATGCCTCCCCCGTTACCCGGGTCTTCAATTCCGTTGCCTCCTCCTTTGCC
TAGATCGTTGATACCGCCACCGCCACCATTACCAGGGACATCGATCCCGA
TGCCACCCCCTCTTCCGCCGAAGGGGACAGCTGCGGTGGGTGATCAGGGG
CCCGCGGCCCTCGCCCCCCCTTTGAGAATGCCTCCTCTAGTAAACGTTGC
AAGTAGGTTTGTGCCCGCGCCAGGCGCGAGGCGACGCGTGTTTTGGACGG
CGATCACCAGCGGGATAGATAAGACGGTGTTCAAGGACATCAAGGACGAA
GAAGTGATGCCTCCCCCGTTACCCGGGTCTTCAATTCCGTTGCCTCCTCC
TTTGCCTAGATCGTTGATACCGCCACCGCCACCATTACCAGGGACATCGA
TCCCGATGCCACCCCCTCTTCCGCCGAAGGGGACAGCTGCGGTGGGTGAT
CAGGGGCCCGCGGCCCTCGCCCCCCCTTTGAGAATGCCTCCTCTAGTAAA
CGTTGCAAGTAGGTTTGTGCCCGCGCCAGGCGCGAGGCGACGCGTGTTTT
GGACGGCGATCACCAGCGGGATAGATAAGACGGTGTTCAAGGACATCAAG
GACGAAGAAGTGGATGTGCCAAAAGAGCTACTGCTGGAAGGGTTCACGGA
GCGACCGAAACAGCCGAAGAAAGCCGTCGGTCACGACAGAGAAGGCGAGG
AGATCAAGGAAGGAGAGAGAGAGGAAAAAAAGCCCAAGCGCGAGTCGCTC
CTCGGGGGAAAGGCGCAAATGAACTACGGTATCGTCTTCAAGAAAGTCAG
GATGTGCCAAAAGAGCTACTGCTGGAAGGGTTCACGGAGCGACCGAAACA
GCCGAAGAAAGCCGTCGGTCACGACAGAGAAGGCGAGGAGATCAAGGAAG
GAGAGAGAGAGGAAAAAAAGCCCAAGCGCGAGTCGCTCCTCGGGGGAAAG
GCGCAAATGAACTACGGTATCGTCTTCAAGAAAGTCAGGGTTTCCCTGGA
TACGCTGCGCACGGCGGTGATGTCGATGGACTTGTCCTTTCTGGACGAGA
ACAAGTTGGGAATGCTCAAGACGCTTCAGCCGGACCCGGGCGAGCTCAAG
ACGTTGCAGGGGTACAAGGGCGACGTCTCCGAGCTCTTGGAGGGTTTCCC
TGGATACGCTGCGCACGGCGGTGATGTCGATGGACTTGTCCTTTCTGGAC
GAGAACAAGTTGGGAATGCTCAAGACGCTTCAGCCGGACCCGGGCGAGCT
CAAGACGTTGCAGGGGTACAAGGGCGACGTCTCCGAGCTCTTGGAGGTCG
AGCAGTTCATGCTGCTTACGTCTCTGATACCACGTTACGACGTTCGAATA
CGGAGCGCGGACATCATGCAGTCCTTCGGTCCAGACGTGGAGTTCACCAC
CAGCAGGCTGGAGATAGTCGACGAGGCTATCATAGAGGTCGAGCAGTTCA
TGCTGCTTACGTCTCTGATACCACGTTACGACGTTCGAATACGGAGCGCG
GACATCATGCAGTCCTTCGGTCCAGACGTGGAGTTCACCACCAGCAGGCT
GGAGATAGTCGACGAGGCTATCATAGAGGTGACCAAGTCGCACAAGCTGA
AGCGGCTCCTGGCGGTGGTACTGGCTGTGGGAAACTTTCTGAACGAAGGG
ACGAAACGAATCGCGTCTGCGATCACCCTCCAGTCCGTCCTGAACCTCGT
CAACGTCAAGTGACCAAGTCGCACAAGCTGAAGCGGCTCCTGGCGGTGGT
ACTGGCTGTGGGAAACTTTCTGAACGAAGGGACGAAACGAATCGCGTCTG
CGATCACCCTCCAGTCCGTCCTGAACCTCGTCAACGTCAAGCGTACAACG
AAGCGGGAGAACTCCGGAGGCGGCGAGGAGAATCTGGTCCACGCCATGGT
GGAGTGGGCAAGCGTTTCGGAGCCATCGTTGCTCCTCCTGGGAGAAGATC
TGCCAAGAGCTGCCAGCGCGTCGAAGCTTAAGCTCGACGAGCTCCGAAAA
GAGGCGTACAACGAAGCGGGAGAACTCCGGAGGCGGCGAGGAGAATCTGG
TCCACGCCATGGTGGAGTGGGCAAGCGTTTCGGAGCCATCGTTGCTCCTC
CTGGGAGAAGATCTGCCAAGAGCTGCCAGCGCGTCGAAGCTTAAGCTCGA
CGAGCTCCGAAAAGAGGTGTTGACTTGCAGGAAAAACTTCCTAGTGTTGG
GTAAAATGCTCGAGGAAGCCAAGGAGTCCATGGGCCCCGAAGAGCTCAAG
AAGCGCGAAGAGCGCAAACGGTTGAAAGAGCGCAAGGAGCGGAGAGCGAA
GGAGCGGAAAGCGAAGGAGCGGAAACGGCTGAAGGAATGCCAAGAAAAGC
TCGAGGAGCTCCTCGCGTCCCAAAGATATCACAGAGCCGAAGGAATCTGA
GTGTTGACTTGCAGGAAAAACTTCCTAGTGTTGGGTAAAATGCTCGAGGA
AGCCAAGGAGTCCATGGGCCCCGAAGAGCTCAAGAAGCGCGAAGAGCGCA
AACGGTTGAAAGAGCGCAAGGAGCGGAGAGCGAAGGAGCGGAAAGCGAAG
GAGCGGAAACGGCTGAAGGAATGCCAAGAAAAGCTCGAGGAGCTCCTCGC
GTCCCAAAGATATCACAGAGCCGAAGGAATCTGA
back to top