mRNA_F-serratus_M_contig1393.2841.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: D7FJR7_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR7_ECTSI) HSP 1 Score: 306 bits (785), Expect = 4.520e-95 Identity = 164/286 (57.34%), Postives = 195/286 (68.18%), Query Frame = 1
Query: 61 EGKVTRVECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVVGETNQPEINNAIVNTEIGQVGESEWAYLDGRQAPPHKLPS--MSEQSSEYRPALAEPEGVKRSGG-------------FYGACFFVAMVLA--LWIWKK 867
EGK TRV+CTTTASPE FT+EV+HSWSPNGAERF+DLVKD YF DVA FRCV++FL QFGISP S KK +WR+KGPIKDD L I FKRG LSFAGSGPNSR TQ+FITF +I HLG PWETPLG+VT GM+TV+D YTGYGDQ PFN++GINQGTLQ RGNAYLREEFP ISY +EC VVGET E +A V + + G Y D + PP + + Q++E +A P+ K G + A F+A+ L + +WKK
Sbjct: 16 EGKTTRVQCTTTASPEAFTLEVYHSWSPNGAERFVDLVKDDYFTDVALFRCVKNFLVQFGISPYVSSPKKKFWREKGPIKDDPNLQISFKRGMLSFAGSGPNSRGTQVFITFADIPHLG--KTPWETPLGIVTQGMDTVVDKFYTGYGDQQPFNQDGINQGTLQSRGNAYLREEFPEISYLKECRVVGETVPEEHASARVEKQQEKPG---GEYGDVLRPPPVMMKDEFIVPQAAE----MAVPQTPKELAGGRDGDGTSPNQSVSFSAIVFLALALGAVVLVWKK 292
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A7S3MFS0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFS0_9STRA) HSP 1 Score: 183 bits (465), Expect = 8.840e-50 Identity = 97/182 (53.30%), Postives = 122/182 (67.03%), Query Frame = 1
Query: 76 RVECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVV 621
RV C+TT P IE++ WSP GAERFLDLVKD +F D+AFFRCVR FL QFGIS P SKKH+ R++ I DD L + K+ LSFAG GPN+R+TQLFI F ++ LG PWETP G V G +T +D+LY YGD PF K G +Q + RGNAY+RE+FP + + + C +V
Sbjct: 22 RVACSTTKGP--LLIEIYKEWSPLGAERFLDLVKDDFFTDIAFFRCVRRFLTQFGISDVP--SKKHWHREE--IPDDPNLNLGIKKNYLSFAGGGPNTRSTQLFIAFEDLDFLG--KEPWETPFGQVIEGQQT-LDSLYKDYGDIPPFGK-GPDQQKIHNRGNAYVREKFPKVDFIKSCHMV 193
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A7S1T0Y9_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0Y9_9CHLO) HSP 1 Score: 183 bits (465), Expect = 1.110e-48 Identity = 118/294 (40.14%), Postives = 161/294 (54.76%), Query Frame = 1
Query: 58 AEGKVTR-VECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVVGETNQPEINNAIVNTEIGQVGESEWAYLDG-------RQAPPHKLPSMSEQSSEYRPALAEP--EGVKRSGGFYGACFFVAMVLALWIWKKYEGFGGRNVWGKRR 909
A G+ T+ V C TTA TIEV W+P GA RFL+LV+ G+F DVA FR V +FL QFGI+ DP+ +KK W+ KG I DD +G P KRGT++FAGSG NSRTTQ++I F + +HLG A WETP VT GM+ V+D Y+GYGD F + + G + GN+Y+++EFP + Y C V+G+ E + G V ++E A D R P + E + + P EG+ G AC F+A A +I + G + GK+R
Sbjct: 23 ARGEETKQVACETTAGK--LTIEVHPEWAPLGAARFLELVESGFFVDVALFRVVPNFLVQFGIAADPEVTKK--WQSKGNIMDDPSIGTPVKRGTIAFAGSGQNSRTTQMWIAFQDSAHLGKAF--WETPFAQVTEGMD-VVDRFYSGYGDMEAFGGHCPDSGKMSTLGNSYVKKEFPQMDYITSCRVLGQ----EAMVVAAADQAGTVQQAELALADAVVEPDAVRVEPNTDSEDLGLDGHEVQHKVVGPYMEGMGPIG--MSACLFIA--AAAFIKIAFMMLDGGSQRGKQR 301
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A7S1R7D7_ALECA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7D7_ALECA) HSP 1 Score: 178 bits (451), Expect = 4.310e-48 Identity = 90/181 (49.72%), Postives = 118/181 (65.19%), Query Frame = 1
Query: 79 VECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVV 621
V C TT +EV+ WSPNGAE FLDLVK G++ D+A FR V +FL QFGIS D ++K+ I+DD LG+PF+RGTLS+AG GPNSRT Q+FI+FG+ LG +PWETP G V+ ++ +YTGYGD P+ K G + +QQ GN Y+R+EFP I + + C VV
Sbjct: 17 VSCDTTKGQ--LDLEVYREWSPNGAEHFLDLVKAGWYTDIALFRAVPNFLVQFGISTDSAMTQKY---GSQTIEDDPSLGLPFERGTLSYAGGGPNSRTNQVFISFGQNRGLG--KSPWETPFGHVSKHSMDILSQIYTGYGDMPPWGK-GPSPSLIQQHGNKYVRDEFPKIDFIRSCKVV 189
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A6B2LG42_9EUKA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG42_9EUKA) HSP 1 Score: 164 bits (416), Expect = 1.140e-42 Identity = 88/193 (45.60%), Postives = 114/193 (59.07%), Query Frame = 1
Query: 85 CTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVVGETNQPEINNAIVN 663
C TTASP+ IEV+ W+P G++RFL+LV+D YF FFR V+ FL QFGI DP K+ W KGPI DD G+ FKRG LSFAG G +SRTT+LF+ + + + G + WE P GVV V D + YGD P+ + G +Q L RGNAYL E FP + Y C++ E N +I+N
Sbjct: 2 CKTTASPKEIRIEVYPDWAPIGSDRFLELVRDNYFTKSPFFRVVKGFLVQFGIPADPSKWKE--WHDKGPINDDPPKGVSFKRGYLSFAGYGEDSRTTELFVAYSDENGFG--NTRWEVPFGVVQD--MDVFDQINDEYGDVPPYGQ-GPDQQQLYLRGNAYLTENFPKMDYISYCSIESEQNSFNTEISILN 187
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: I2CPH7_NANGC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CPH7_NANGC) HSP 1 Score: 165 bits (418), Expect = 3.290e-42 Identity = 99/238 (41.60%), Postives = 136/238 (57.14%), Query Frame = 1
Query: 73 TRVEC-TTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVVGETNQPEINNAIVNTEIGQVGESEWAYLDGRQAPPHKLPSMSEQSSEYRPALAE 783
T V+C TT A+ F E+ W+P GAERFL LV GYF DV FFR V FL QFGI P P + +K WR++G I DD RG LSFAG+GPN+R TQLFI + S LG +PWE P+G V GM+ VID LY GYG+ PFNK G+ Q + + YLR +FP + Y ++C ++ + + A + + G+ E++ + + P L ++S + + PA E
Sbjct: 36 TLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPP-PSAVRKR-WREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLG--KSPWEVPVGRVIEGMD-VIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAIIPASAK----KASIQEDRGRREETKRVVVGEERVPEETLNALS-NARDKEPAWTE 262
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A7S0CX23_9EUKA (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CX23_9EUKA) HSP 1 Score: 162 bits (410), Expect = 5.120e-42 Identity = 87/182 (47.80%), Postives = 112/182 (61.54%), Query Frame = 1
Query: 79 VECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFAD-VAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTT-GMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTV 618
+ C +T P F I + +WSP GA+RF DLV++GYF D V FR V+ FL QFGIS + S+ W K PI DD R+ FKRG +SFAGSGPNSRTTQ FI + + +HLG +APWETP G ++ ME V+DN Y+ YGD F +QG G Y+++EFP + Y C V
Sbjct: 35 IRCQSTKGP--FVINMVRAWSPRGADRFKDLVEEGYFDDGVGMFRVVKGFLVQFGISNNV--SRNAAWEVKSPIPDDTRVLSTFKRGYVSFAGSGPNSRTTQTFICYQDNNHLG--NAPWETPFGWISGYDMEKVVDNFYSEYGDIPHFGGKCPDQGRYSHEGGEYVKKEFPNLDYITSCRV 210
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A7S0XSB7_9STRA (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0XSB7_9STRA) HSP 1 Score: 153 bits (387), Expect = 5.270e-38 Identity = 86/217 (39.63%), Postives = 119/217 (54.84%), Query Frame = 1
Query: 28 GVSNVMSDASAEGKVTRVECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLG--IPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVVGETNQPEINNAIVNTEI 672
G N ++ + V+C T+A P T+ + SWSP+G +R L + GYF FFR V FL QFGI D K + + I DD + +PFK G +SFAGSGPNSR++Q+FI + LG +PWETP G VT+G+E V N Y GYGD P+ K G QG + RG +Y+ +FPL+ F+ C+V NN ++ + I
Sbjct: 63 GSGNAPKSVGSDQEEAIVQCDTSAGP--ITMHFYRSWSPHGYDRATTLFEKGYFDHSHFFRVVEHFLVQFGIGYTTDKELKAF--SQSTIPDDPKRPELLPFKEGMMSFAGSGPNSRSSQMFIAYDRAGGLG--QSPWETPFGKVTSGLENV-KNFYKGYGDMPPWGK-GPQQGPIHSRGASYIESDFPLLDKFETCSVQRMNQSTGSNNLVILSSI 271
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A8J2SSR7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSR7_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.040e-37 Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 28 GVSNVMSDASAEGKVTRVECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFAD-VAFFRCVRDFLCQFGISPDPDSSKKHYWRKKGPIKDDIR-LGIP-----FKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLG-VVTTGMETVIDNLYTGYGDQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTVV 621
G N + A G TR+ C TTA P TI++ +W+P G++RFLD+V G+F+ V FR V++FLCQ G+ DP ++ WR+KG IKDD + L + KRG L+FAGSGP+SRTT+ F F ++ LG PWE P G +V +D Y GYGD F QG + +RG AYL EEFPL+ + C V
Sbjct: 94 GPENPSTFVKARGATTRLHCETTAGP--LTIDIHENWAPLGSQRFLDMVNTGFFSSRVGLFRAVKNFLCQTGVPGDPAVHQQ--WRQKGRIKDDPQWLDLTGQKQALKRGYLAFAGSGPDSRTTEFFFAFRDLK-LGFQ--PWEVPFGELVGEASYAALDRFYAGYGDMRAFGGRAPAQGQIYRRGAAYLDEEFPLLDFMTSCEEV 292
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Match: A0A7S4JKR9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JKR9_9EUKA) HSP 1 Score: 152 bits (384), Expect = 1.740e-37 Identity = 85/190 (44.74%), Postives = 114/190 (60.00%), Query Frame = 1
Query: 79 VECTTTASP-EVFTIEVFHSWSPNGAERFLDLVKDGYFADVAFFRCVR-----DFLCQFGISPDPDSSKKHYWRKKGPIKDDIRLGIPFKRGTLSFAGSGPNSRTTQLFITFGEISHLGAASAPWETPLGVVTTGMETVIDNLYTGYG----DQLPFNKNGINQGTLQQRGNAYLREEFPLISYFQECTV 618
VEC+TT P + IEV+ +WSP GA+RF++LVKDGY+ FR + +L QFGIS + D +K W I DD LG F RG +SFAG+GPNSRTTQ+FI +G+ + G +APWETP G V GM + D Y G G D PF + G + ++ +G YLR+ FP ++Y +EC V
Sbjct: 59 VECSTTVDPSQKIVIEVYSNWSPLGAKRFVELVKDGYYDQSPIFRVAKRGRNWGYLTQFGISLNKDLEEK--WGSS-TIPDDPSLGFSFDRGDISFAGNGPNSRTTQVFIPYGDTTSRGLGNAPWETPFGKVVVGMN-IADEFYDGDGKISLDIPPFGQ-GPDPHKIKTQGRPYLRKNFPELTYIEECVV 243 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1393.2841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1393.2841.1 >prot_F-serratus_M_contig1393.2841.1 ID=prot_F-serratus_M_contig1393.2841.1|Name=mRNA_F-serratus_M_contig1393.2841.1|organism=Fucus serratus male|type=polypeptide|length=291bp MSDASAEGKVTRVECTTTASPEVFTIEVFHSWSPNGAERFLDLVKDGYFAback to top mRNA from alignment at F-serratus_M_contig1393:218162..226862+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1393.2841.1 ID=mRNA_F-serratus_M_contig1393.2841.1|Name=mRNA_F-serratus_M_contig1393.2841.1|organism=Fucus serratus male|type=mRNA|length=8701bp|location=Sequence derived from alignment at F-serratus_M_contig1393:218162..226862+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1393:218162..226862+ >mRNA_F-serratus_M_contig1393.2841.1 ID=mRNA_F-serratus_M_contig1393.2841.1|Name=mRNA_F-serratus_M_contig1393.2841.1|organism=Fucus serratus male|type=CDS|length=1746bp|location=Sequence derived from alignment at F-serratus_M_contig1393:218162..226862+ (Fucus serratus male)back to top |