mRNA_F-serratus_M_contig1387.2789.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: D7FYN9_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYN9_ECTSI) HSP 1 Score: 332 bits (851), Expect = 3.630e-109 Identity = 167/209 (79.90%), Postives = 189/209 (90.43%), Query Frame = 3
Query: 396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSRRNVS 1022
MTSIVELFPK RRL+FDL+TL+QYVE+GHASPDDAGM LEE GRQLD+L+S VGQERP+QREDWRRKLRELR+E FLRDQLGR +QGRRK QEA+EREELLARRHA LP+SVMD+YAEEG SLLRSRRMVG+Y+Q GQ SL SLV QRSRLKNAHR+VLDM N++GLSNSILRV++RR+AVD+LLVLGG+IVTS FLWWMW RR S
Sbjct: 1 MTSIVELFPKARRLSFDLRTLLQYVERGHASPDDAGMNLEEFGRQLDVLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSDRRQAVDRLLVLGGIIVTSVFLWWMWGRRVAS 209
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A835ZDP4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP4_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.750e-80 Identity = 131/208 (62.98%), Postives = 169/208 (81.25%), Query Frame = 3
Query: 396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSRRNV 1019
MTSIVELFPK RRL +DLQT +Q++EKGHAS DD G+ L+EL +QL +LDS QERP+QRE+WRRKL+EL ++DFLR+QL R N R++ +EARERE LLARR+A LP+ V+D+YAEEG SLLRS+RM+G+Y+Q GQ +LASLV QR RLK RRVLD+ NV+G+S SILR++ RREAVD+LLVLGGM+ + L++ W+R+ V
Sbjct: 1 MTSIVELFPKARRLAYDLQTQIQFLEKGHASADDVGVSLDELEQQLKILDSLASQERPAQRENWRRKLKELVGDKDFLREQLDRYNNSRQRQGREAREREALLARRNAALPSGVVDAYAEEGSSLLRSQRMMGDYLQSGQAALASLVDQRHRLKGVQRRVLDIANVMGVSGSILRMSERREAVDRLLVLGGMVFITGLLYYAWARKGV 208
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S2XZE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE9_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.270e-50 Identity = 100/212 (47.17%), Postives = 143/212 (67.45%), Query Frame = 3
Query: 399 TSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLW--WMWSRRNVSEV 1028
TS+VEL PK R+L F+LQT VE G A+ +D L EL +QL++L+S V ERP+QRE WR+KL EL+ + DFLR L R +E +ER+ELL RR +P+SV+++Y EEG +L RS+ MV + GQ +A+L+ QRS LK+A R++LD+ N++GLS ++R ANRR+A DK +V GGMI+T FL+ + +S R+ + V
Sbjct: 4 TSVVELVPKARKLLFELQTQQTLVETGKANAEDVYFGLSELSQQLNILESLVNNERPAQRESWRKKLTELQRDVDFLRASLDRHVAKSSSGLREQQERQELLLRRTQAMPSSVVENYMEEGAALTRSQAMVEDLTYTGQAIMANLLDQRSTLKSAQRKILDLANLLGLSGVLMRSANRRDATDKWIVFGGMIITLGFLYFCYWYSTRSTTSV 215
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: W7U6N0_9STRA (Golgi snap receptor complex member 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6N0_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.660e-48 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 3
Query: 396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHAT-----LPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
MTS+ EL PK ++L F+LQ ++ VE G+ SPD+ M L EL RQ+ +L + V QERP RE W+R++ EL SE FLR L R Q R K +QEA+EREELLARR+ P ++ EEG S RS M+ + + GQ +L++L+ QRS LK+A ++VLD+ N++G+S+ I +A RR+ VDKL+V GGM VT LW W
Sbjct: 1 MTSVAELLPKTKKLAFELQGQVRQVEIGYVSPDNVFMGLGELERQISILHTLVAQERPGAREQWQRRIGELHSEAVFLRTVLNRFLQSRGKVAQEAKEREELLARRYGKGGDLEAPARAVEELLEEGASYQRSSAMMNDILMSGQATLSNLLDQRSSLKSARKKVLDVLNLLGVSHRITGMAERRDTVDKLIVAGGMAVTLLVLWLCW 208
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S2CFP0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFP0_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.500e-38 Identity = 85/208 (40.87%), Postives = 125/208 (60.10%), Query Frame = 3
Query: 393 TMTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGM--IVTSAFLWWMWSR 1010
TMTS+VELFP+ R+L++DLQ ++ VE +P D + LEEL RQ L+ V QE +++++W+ K+R++ RD+L QL + + E ER+ELL R ++LPTSV+ +Y EEG SL RS +V + E++A L+ QR LK R+VLDM +G+S S +R+ RR VD +V GGM + +L W W R
Sbjct: 5 TMTSVVELFPRTRKLSYDLQQQLREVEAKRMAPSDMELGLEELKRQTQTLEMLVEQE-VNRKDEWKAKIRDVCMTRDWLDSQLRHWRTQHDRAAVEEAERQELLGRVRSSLPTSVIGAYDEEGRSLSRSNNVVANLLDGAGEAMAELMDQREMLKGTQRKVLDMLTTLGVSKSTIRIIERRNVVDNAIVWGGMGFVTLCLYLLWRWVR 211
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: B8BUE6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUE6_THAPS) HSP 1 Score: 147 bits (372), Expect = 5.740e-38 Identity = 85/207 (41.06%), Postives = 129/207 (62.32%), Query Frame = 3
Query: 396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATL----PTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
MTSIVELFPK R+L +D + + V+ G P + + L+EL RQLDL+++ +E P+QRE W+RK+ ELR + +R+Q ++ ++ +ER+ELLARR M +EE SL S M+ + + GQ SL++LVGQR R++ +R++LD+ N IGLSNS +R+ RR+A D LV GGMIVT +++++
Sbjct: 1 MTSIVELFPKSRKLAYDSRQQLSQVQNGLICPSELFLSLDELSRQLDLMENLTNKETPAQREIWKRKILELREDAQSIRNQGNHYDRMVSAGIRQRKERDELLARRRRNRGNGGDADEMQQLSEEADSLATSHGMMNDLLSSGQASLSNLVGQRQRMRWVNRKMLDIGNKIGLSNSTMRMIERRDATDAWLVFGGMIVTLLVIYFLY 207
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: K0RHB4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHB4_THAOC) HSP 1 Score: 141 bits (356), Expect = 2.190e-34 Identity = 89/229 (38.86%), Postives = 133/229 (58.08%), Query Frame = 3
Query: 336 RERQEASAP*LLLPL-LRASTMTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTS-----VMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
R ++S +L P + ASTMTSIVELFPK R++ +D + V+ G P + + L+EL RQLD++ S +E P+QR+ W RK+ ELR + D LR Q ++ ++ REREEL+ RR T M AEE SL S M+ + + GQ SL+SLV QR +++ +R+VL++ N +GLS S +R+ RR+ D LV GGMI+T ++ ++
Sbjct: 95 RNSAQSSNAGVLQPCSISASTMTSIVELFPKCRKICYDARQTAAQVQNGLIDPSNLFLSLDELSRQLDIMSSLAQKETPAQRQMWERKILELREDSDGLRRQGEHYDRMVGAGMRQRREREELMMRRRKNRTTGDGVADEMAQLAEEADSLASSHGMMNDLLASGQSSLSSLVNQRQKMRWINRQVLNIGNKLGLSQSTIRMIERRDTTDAYLVFGGMIITLLVIYCLY 323
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S3PUS9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUS9_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.250e-33 Identity = 85/211 (40.28%), Postives = 122/211 (57.82%), Query Frame = 3
Query: 396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRHATLPTSVMDS------YAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSR 1010
MTSIVELFPK R+L +D + + V+ S + + L+EL RQL +++ + +E P+QRE WRRK+ EL+ + +R Q ++ + REREELL R DS AEE SL S+ MVGE + GQ L SL+ QR R++ A R VL++ N IGLSNS +R+ RR+ D LVL GM++T ++++W R
Sbjct: 2 MTSIVELFPKSRKLAYDARQQLSQVQNNLLSATELYISLDELQRQLSIIEQLLSRETPAQREIWRRKILELQEDASSIRRQGEYYHRMVNSNLRVQREREELLTRXXXXKKDGFGDSELGIQDLAEESTSLASSQNMVGELLMSGQAQLNSLIDQRRRMRGAKRMVLNIGNTIGLSNSTMRMIERRDENDVKLVLAGMVLTLLVIYFVWIR 212
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A6U0P085_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0P085_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.640e-33 Identity = 78/212 (36.79%), Postives = 123/212 (58.02%), Query Frame = 3
Query: 396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRH-------ATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMWSR 1010
MTS+ ELFPK R+L +D + + V+ + L+EL RQL+++DS V Q+ P+QR+ W+RK+ ELR + + +R Q ++ +E +EREEL+ RH + M+ + EE SL S+ MVG+ + GQ L SL+ QR+R++ R VLDM + +GLSN+ +R+ RR+ D V GGM +T ++++W R
Sbjct: 1 MTSVNELFPKSRKLAYDARQQLCQVQNKSLHASELFFSLDELSRQLNIMDSLVSQQTPAQRQVWKRKILELREDANSIRRQGQYYDRMVSANVREQKEREELMTLRHRRGGRGRGDDAENAMNDFTEESESLAMSQNMVGDLLVSGQSQLNSLMDQRNRMRGVKRLVLDMGSKVGLSNATMRMIERRDTTDAYFVFGGMFLTILIIYFVWFR 212
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Match: A0A7S2XN21_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN21_9STRA) HSP 1 Score: 134 bits (336), Expect = 7.990e-33 Identity = 79/207 (38.16%), Postives = 124/207 (59.90%), Query Frame = 3
Query: 396 MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDSFVGQERPSQREDWRRKLRELRSERDFLRDQLGRINQGRRKTSQEAREREELLARRH----ATLPTSVMDSYAEEGGSLLRSRRMVGEYMQVGQESLASLVGQRSRLKNAHRRVLDMTNVIGLSNSILRVANRREAVDKLLVLGGMIVTSAFLWWMW 1004
M SIVELFPK R+L +D + + V+ G P + M LEE+ R LD++++ + +E PSQRE WRRK+ ELR + + +R Q ++ ++ RER+ LL+RR AT ++ A+E S+ S+ M+G+ + GQ SL L+ QR R+K R +LD+ + IGLSNS +R+ RR+ D V GGM+V +++++
Sbjct: 1 MASIVELFPKNRKLAYDARQQLAQVQNGLLPPSELFMLLEEISRSLDIMENLLSRETPSQREVWRRKILELRDDANSVRRQAEHYDRMVGANVRQQRERDALLSRRRRTRRATGEEGEINDLADEYQSMESSQIMMGDLLASGQASLTGLIEQRQRMKGVKRVMLDIGSKIGLSNSTMRIIERRDVTDAYFVFGGMVVCLLLMYFLY 207 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1387.2789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1387.2789.1 >prot_F-serratus_M_contig1387.2789.1 ID=prot_F-serratus_M_contig1387.2789.1|Name=mRNA_F-serratus_M_contig1387.2789.1|organism=Fucus serratus male|type=polypeptide|length=212bp MTSIVELFPKVRRLTFDLQTLMQYVEKGHASPDDAGMRLEELGRQLDLLDback to top mRNA from alignment at F-serratus_M_contig1387:145658..149938- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1387.2789.1 ID=mRNA_F-serratus_M_contig1387.2789.1|Name=mRNA_F-serratus_M_contig1387.2789.1|organism=Fucus serratus male|type=mRNA|length=4281bp|location=Sequence derived from alignment at F-serratus_M_contig1387:145658..149938- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1387:145658..149938- >mRNA_F-serratus_M_contig1387.2789.1 ID=mRNA_F-serratus_M_contig1387.2789.1|Name=mRNA_F-serratus_M_contig1387.2789.1|organism=Fucus serratus male|type=CDS|length=1272bp|location=Sequence derived from alignment at F-serratus_M_contig1387:145658..149938- (Fucus serratus male)back to top |