mRNA_F-serratus_M_contig1386.2785.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: D7G3E6_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E6_ECTSI) HSP 1 Score: 408 bits (1048), Expect = 9.210e-137 Identity = 197/269 (73.23%), Postives = 230/269 (85.50%), Query Frame = 2
Query: 164 TGVPTKELSQSIAKGMQIISEIEQAREDGMVFKFEMDLMYELAGDKATTRAPPGLCLANCQHANCRNMEDPNGPAFLCCAKCGAKYCCRDCQVRDWKTNHKVMCAQLREMRA-ESGCRRNPIDRQSVMARVLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTEKDALQLNLDDT 967
T V + E+ +SI KGM+IIS+IE+ R DGMVFKFE+DLMY LAG+KAT RAPPGLCLA+CQ A C E+P G F CC+KCGAKYC R+CQV DWK +HK MC QL+EMR ++G R P+DRQSV+ARVL +VRLYLCPFAVCHG+ GRGFVFVQTPNPVLELEYLRPVNSNGRRLDRS+ILHFL +GEFVDAV+QDDFELGVIR PLEA++++YD K E+VVL +ARCGY AVVVVPLVP ++VCR+LG+EY EKDALQLNLDDT
Sbjct: 32 TAVVSGEVCESIKKGMRIISDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTEEPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDT 300
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A835Z3P7_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3P7_9STRA) HSP 1 Score: 310 bits (794), Expect = 7.590e-99 Identity = 149/265 (56.23%), Postives = 192/265 (72.45%), Query Frame = 2
Query: 170 VPTKELSQSIAKGMQIISEIEQAREDGMVFKFEMDLMYELAGDKATTRAPPGLCLANCQHANCRNMEDPNGPAFLCCAKCGAKYCCRDCQVRDWKTNHKVMCAQLREMRAESGCRRNPIDRQSVMARVLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTEKDALQLNLDD 964
+ TKEL + +G+ I+ +IE R DGMVF FE DL++EL+GDKA +APPGL L CQ C N E G F C+ CG++YCCR+CQV DWK+ HK MCAQL+ + A + +D++ ++R L+KVRLYLCPFAVCHG G GFVFVQ+PN +LEL Y+ PV S GR L RSL+LH++ GEFV+AVMQDDFEL +R PLEA++ A D ++EVVVL++ARCGY VV +PLVPE +VCR L +Y +DALQLNLD+
Sbjct: 18 IGTKELEAKVQEGLDIVQQIETGRADGMVFHFEGDLLFELSGDKAVAKAPPGLQLHKCQKPTCENTETMGGKPFNQCSGCGSRYCCRECQVSDWKSLHKPMCAQLKALSAGA-----KVDKRDAVSRTLSKVRLYLCPFAVCHGSAIGPGFVFVQSPNSLLELNYMGPVTSAGRALQRSLVLHYMSPGEFVEAVMQDDFELMTVRTPLEAAIAAADAQREVVVLMRARCGYICVVTMPLVPEIAVCRALAGDYEGRDALQLNLDE 277
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A1E7FEW3_9STRA (MYND-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW3_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.530e-38 Identity = 79/197 (40.10%), Postives = 120/197 (60.91%), Query Frame = 2
Query: 398 CAKCG-AKYCCRDCQVRDWKTN-HKVMCAQLREMRAESGCRRNPID---RQSVMARVLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTEKD---ALQLNLDD 964
C KC A YC RDCQ+ DWKT HK+ C + + PI +Q + + ++R Y+CP+AV GRGF+F+QT + +L P + G + RS++LHFL LGEF V ++DFEL ++R PL+ ++D+Y+ +KEVV+L + RCG ++ LVP++ +C+KLG +Y ++ A+QLNLDD
Sbjct: 36 CGKCQVAAYCSRDCQMSDWKTGRHKMACPSYARVA------QTPISDKTKQEIRNELFQRIRFYVCPYAVLRTSELGRGFLFLQTDKTLQDLSVYIPKDCTGHTVTRSILLHFLTLGEFDSEVCKEDFELAMMRTPLKDAIDSYETEKEVVILCRFRCGNMSLGKAILVPDYGICKKLGQDYYAENPAGAVQLNLDD 226
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A7S0UGY3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGY3_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.930e-38 Identity = 76/194 (39.18%), Postives = 121/194 (62.37%), Query Frame = 2
Query: 398 CAKCG-AKYCCRDCQVRDWKTN-HKVMCAQLREMRAESGCRRNPIDRQSVMARVLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTEKD---ALQLNLDD 964
C+KCG A YC R+CQ++DWK HK+ C + C + ++++ + A++R Y+CP+AV GRGF+F+QT + ++ P + G + RS++LHFL LGEF V + DFEL ++R PL+ +++ YD ++EVV+L + RCG ++ LVP++ +C+KLG +Y ++ ALQLNLDD
Sbjct: 56 CSKCGVAAYCSRECQIQDWKAGRHKMACPSYARVAKAPLCDKT---KETIRNELFARIRFYVCPYAVFRTAELGRGFLFLQTDRTLEDMSLYIPKDCTGHTITRSVLLHFLTLGEFDSEVCRTDFELALMRTPLKEAVETYDTEQEVVLLCRYRCGNMSLGRAALVPDYRICKKLGQDYYSENSAGALQLNLDD 246
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A448ZP53_9STRA (MYND-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP53_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.330e-37 Identity = 79/197 (40.10%), Postives = 121/197 (61.42%), Query Frame = 2
Query: 398 CAKCG-AKYCCRDCQVRDWKTN-HKVMCAQLREMRAESGCRRNPID---RQSVMARVLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEY---TEKDALQLNLDD 964
CA+CG A YC R+CQ DWK HK+ C + + P+D ++++ + A++R Y+CP+AV G GF+F+Q+ + +L P + GR + RS++LHFL LGEF V +DDFEL ++R PL+ ++++YDP+KEVV+L + RCG A+ LVP++ +C++L +Y ALQLNLDD
Sbjct: 66 CARCGVAAYCSRECQAGDWKAGRHKMACPSYARVA------KTPLDGDTKKAIRNELFARIRFYVCPYAVHRTAELGSGFLFLQSDRTLRDLSPYIPKDCTGRAIVRSVLLHFLTLGEFDSEVCKDDFELAMMRTPLKEAVESYDPEKEVVLLCRFRCGNMALGRAVLVPDYPICKQLAKDYYTGNTAGALQLNLDD 256
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A7S2A9V4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9V4_TRICV) HSP 1 Score: 146 bits (369), Expect = 1.730e-36 Identity = 83/195 (42.56%), Postives = 117/195 (60.00%), Query Frame = 2
Query: 413 AKYCCRDCQVRDWKTN----HKVMCAQLREMRAESGCRRNPIDRQSVMARVLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRL--DRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTE-----KDALQLNLDD 964
A YC RDCQV DWK+ HK CA R + E R + D+ + VL +VR Y P+AV T GRGF+FVQ+ + EL P +GR L +RS+++HFL +GE+ V +DDFE+ +R L+ ++ AYD +KE VL++ RCG+ AV + LVPE+ VC+ LG EY + + ++QLNLDD
Sbjct: 75 APYCSRDCQVSDWKSGTGGGHKHHCASYRRVGTEFALRTDD-DKAAARDEVLRRVRFYAFPYAVHRSSTLGRGFLFVQSGCTLAELSLPNPKRPDGRPLGRERSVLMHFLTMGEYDLEVCRDDFEMASVRGELKDAVKAYDERKEAAVLVRFRCGHVAVGLATLVPEYGVCKALGREYYQGTVGAEGSVQLNLDD 268
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A7S2R2L0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2L0_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.220e-35 Identity = 82/211 (38.86%), Postives = 123/211 (58.29%), Query Frame = 2
Query: 398 CAKCG-AKYCCRDCQVRDWK------TNHKVMCAQLREMRAESGCRRNPIDRQSVMARVLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEY---LRPVNSNGRRL------DRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEY------TEKDALQLNLDD 964
C+KC A+YC RDCQV DWK T HK CA L+ + +P D+ S ++ ++R Y CP+AV T GRGF+F+Q + + E+ L P+++ RS++LH+L LGEF V +DDFEL +R L+ ++D++D +K++VVL++ RCG+ AV PLVP++ +C+ LG +Y A+QLNLDD
Sbjct: 72 CSKCHVARYCSRDCQVADWKKSPNGGTAHKFTCAALKRVGIHMQIT-SPDDQASARQDIVFRIRFYACPYAVNKSITLGRGFLFLQGTSTLAEMSLPTTLNPLHNXXXXXXXXXVKQRSVLLHYLTLGEFDSEVCRDDFELATVRDRLKQAVDSHDIEKDMVVLMRFRCGHVAVGTAPLVPDYGLCKSLGQQYYGTGEGASSGAIQLNLDD 281
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A7S0F684_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F684_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.660e-34 Identity = 89/236 (37.71%), Postives = 134/236 (56.78%), Query Frame = 2
Query: 281 YELAGDKATTRAPPGLCLANCQHANCRNMEDPNGPAFLCCAKCG-AKYCCRDCQVRDWKTN-HKVMCAQLREMRAESGCRRNPIDRQSVMARVLAKVRLYLCPFAVCHGQTQ-GRGFVFVQTPNPVLELEYLRPVNSNGRRLDR-SLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTEKD----ALQLNLDD 964
+EL ++A P +C H C E N C +KC AKYC RDCQV DWK HK++C + + + N + +V A + A++R Y CP+AV H TQ G+GF+FVQ+ + +L P + G + R S+++HFL LGE+ V +DDFE+ R L ++ YD +KEVV+L + RCG+ AV LVP++ +C++LG +Y + + A+QLNLD+
Sbjct: 45 FELGYNEAPKTVEP-----SCFH--CGKHESENAKLSKC-SKCQTAKYCSRDCQVNDWKDGRHKLVCKSYQRLNDDFD--NNADAKAAVRAELYARIRFYACPYAV-HKTTQLGKGFLFVQSNMSLRDLSIPIPKDVTGVAMPRRSILMHFLTLGEYDSEVCRDDFEMAEARTKLSQIVEEYDEEKEVVLLYRMRCGHVAVGRAVLVPDYGICKQLGRDYYDSNNSAGAVQLNLDE 269
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A1Z5JUW9_FISSO (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUW9_FISSO) HSP 1 Score: 138 bits (348), Expect = 6.030e-34 Identity = 81/195 (41.54%), Postives = 122/195 (62.56%), Query Frame = 2
Query: 398 CAKCG-AKYCCRDCQVRDWKTNHKVMCAQLREMRAESGCRRNPIDRQSVMAR--VLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTEK---DALQLNLDD 964
C++C A YC ++CQ++DWK HK CA + + A+ R N D S AR VL ++RLY P+AV Q GRGF+F+Q+ + L + GR +RS++LH+L LGE+ V +DDFEL +R L+ +++ YD ++++VVL++ RCG+ AV ++PL EF+VC +LG EY + AL+L LDD
Sbjct: 48 CSQCHVATYCSKECQIQDWKQRHKKYCAAYQRIDAQG--RWNTPDDDSAHARHHVLHQIRLYAMPYAVYQMQALGRGFLFIQST------QTLAALTLPGR--NRSVLLHYLTLGEYDAEVCRDDFELTAVRTCLQKAVNDYDAQQQMVVLMRFRCGHVAVGIIPLSLEFAVCLQLGKEYYQNVTAGALELQLDD 232
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Match: A0A1Z5K1R0_FISSO (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1R0_FISSO) HSP 1 Score: 130 bits (327), Expect = 9.380e-31 Identity = 78/214 (36.45%), Postives = 122/214 (57.01%), Query Frame = 2
Query: 356 CRNMEDPNGPAFLCCAKCGAKYCCRDCQVRDWKTNHKVMCAQLREMRAESGCRR------NPIDRQSVMAR--VLAKVRLYLCPFAVCHGQTQGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSLILHFLKLGEFVDAVMQDDFELGVIRRPLEASLDAYDPKKEVVVLLKARCGYTAVVVVPLVPEFSVCRKLGVEYTEK---DALQLNLDD 964
C + P C A YC ++CQ++DW+ HK CA + + + + +D SV+AR V ++RLY P+A QT GRGF+F+Q+ ++ L GR +RS++LH+L LGE+ V +DDFEL +R L+ +++ YD ++++VVL++ RCG+ AV V+PL E++VC +LG EY + AL+L LDD
Sbjct: 50 CFHCHTPLTTPKQCSQXXXAIYCSKECQIQDWRKKHKKYCAAYQRIDTHGHWKTPDNDVDDDVDDYSVLARHHVWHQIRLYAMPYAAHQMQTLGRGFLFLQSTQTLVAL------TLPGR--NRSVLLHYLTLGEYDAEVCRDDFELTAVRTCLQKAVNDYDAQQQMVVLMRFRCGHVAVGVIPLSLEYAVCLQLGKEYYQNVTAGALELQLDD 255 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1386.2785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1386.2785.1 >prot_F-serratus_M_contig1386.2785.1 ID=prot_F-serratus_M_contig1386.2785.1|Name=mRNA_F-serratus_M_contig1386.2785.1|organism=Fucus serratus male|type=polypeptide|length=299bp MPTTPVPPVAENISSERKTSECSGSTLATTTGVPTKELSQSIAKGMQIISback to top mRNA from alignment at F-serratus_M_contig1386:182067..193318- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1386.2785.1 ID=mRNA_F-serratus_M_contig1386.2785.1|Name=mRNA_F-serratus_M_contig1386.2785.1|organism=Fucus serratus male|type=mRNA|length=11252bp|location=Sequence derived from alignment at F-serratus_M_contig1386:182067..193318- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1386:182067..193318- >mRNA_F-serratus_M_contig1386.2785.1 ID=mRNA_F-serratus_M_contig1386.2785.1|Name=mRNA_F-serratus_M_contig1386.2785.1|organism=Fucus serratus male|type=CDS|length=1794bp|location=Sequence derived from alignment at F-serratus_M_contig1386:182067..193318- (Fucus serratus male)back to top |