mRNA_F-serratus_M_contig1386.2783.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1386.2783.1 vs. uniprot
Match: D8LL32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL32_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.300e-86 Identity = 439/1396 (31.45%), Postives = 571/1396 (40.90%), Query Frame = 3
Query: 366 GGGGSVV-------DIRVLQPPFHGPLNSKEACPLKRPRCAMDSGSKKQRHSSMNGDACVGAPKDSAIGGGGQAMEEESHGHAKMHEDVQHDMDVEKSESIGSQSGRGDSGADGVGADMPFQALDDQHLGVDTRSEPASLGDSWQCGTTEIFAGDLQRRPR--GRLDSVDTGNETTFEEYLSDRGHDEGGCERDYPNKLPDDDVESKRRHDAEAVVDPTTKDNDSDRGSTKGIDFGRESTEESGGGSQADRGEDRASTE------WHPRKGDLVEVERRMTPGVNKPGGTARVVKVDSSTCAVDVRYVVEGGWERGIDPVYVRPAVLDMSHRRPTLGRCPHCGSLRVDCGQRCEFYLESSSRRLLPPTNSSRVGRNSVLGKGSVDGAGTDQDGRRGEGRRHVRRRRREDYQSRVSDDGEIDLVTRDKGRLQ---RRRHLPEHWDGEGDPASRSDVRGKGEGGSESDLSS---------------------IGRRFWLMEDDSD-GTLG-RKVRSDLRSGNPTDGLATKSQRQRRSGDARDNTESSTEDDIEAFAVVRDRWNIHSGRRRVFSKSSSGSSGDSDSSRSGGHRNNRHSGASDA---TGISDTEECSGGEDLSSSSERGVGRQGWRGDTVDTTSGKAARFLMPEGEEAARMLPSDIADPTRGVKDPVQLRRELKIMLHEMEDCAANELEQAVPAACRCVSAASDSSXXXXXXXXXXXSGSWRANVRRKMATPGEDGASARDRKRSGGDXXXXXXSKDASSSVRSERRLRGSGLYARCSRVRDHGWGGRGTGRDGETEEREAPYLLGLDYGMAADGGRGSTLRSVSAPVNERDRRARSRVQSV--------AARRTRPRTEINGRALMEQQYIYRLAQQRARGAPHPLEEDAPGTVAAI------ESVPPLYKQDKAPVRPIAELQGRPGKRGAAAGG-----------VPQTPPRLPSLVEDLVSLPPKARRLLRFKTLYSQNLGVNSATV-----DGLTLQFDGVDSCLVIHR---GLGQGSRSAPDTIGELVRAINKLPQRMADLEELATVEGLED-GEVLSVARECCGFMAVIGAKLR----------ALCSPP--------------------LDHTNGPKARREPSRESLRA--VRVVLERLVEACAPGRDTRG----DGGRT-PGLSLTRVTEIGESLADS----AGSAVLVETCAAFHIHLLEWLALSHESVDGDGVLASSAEPERNDPDMRRTLG----------------GPVMNFARRLLLDLLLLFEKRLSARPDASSTLPRRDDGTRGPSLFPTPTLLHVSKDPLAELLSALMETLDGT---------AEAFSAPGMVARALLERVLVLARFCAPEAGPRGVVETLWGGVERISRAIC 4121
GGGGS +I V F + A PLKRPR A S K+R +A P+ A GGG + G E + +D ++S S+ QSG G G D +P + + + + P G+S E GD Q P+ R D G + E ++ H +G +R+ P+ PD + R VVD + +D G G+ G + G++ D GE+ S W PRK +LVEV RRM PG+NK GGTARVVKVD +T VDVR+VVEGGWER IDPVYVRPA LDM+ +R T GRC HCGSLRVDC Q CE++ +SR + S D +SR S + D+ R++G RRRHLP+ WD EG+P S IGRR + SD GT +V + R G+ +DG +G D+ + DI+ V+ H G + S S G R++ GASD +G+ EE GE +S SSE G G G G FL EG+E LP DI DPTRGVKDP L+ L+ +L +ME +LE+ V AACRCV +A+ + + R+ GE G XXXXXX GR G R AP L L T R + +AL Q Y LAQQ ARG P + A G VAAI + + +++ VR E G+R A G P L++ +V+ R L F TL+++ +A V G L+ GVD C V G G S+ D GE+ RA+ LPQRMAD+EELA GL+D E ++A ECC MAV+GAKLR A SP L ++ P +EPS R+ V + RL EACAPG+ DG R PGLSLT A++ G + L CAA H+HLL+WL+L +V+ D G +++FARR+LLDLL LFEKR P S + RR+ R LL SKDP AELL A+M+TLDG+ AE +APGMVAR LLERVLV+AR PE P+GVVE LW GV+RIS +C
Sbjct: 149 GGGGSPSVSPQSPKEIAVPGGAFR--RGRERAHPLKRPRPAGSSQEAKERE-----EARPDPPRKQA-GGGVPGVPPRVWGXXXGVELKKAAVD-DRSSSL--QSGEGGQGMDVEDDGLPRRKVSHGDT-FGSGAVPGGAGESATAAAAEGTEGD-QTPPQLSKRYDKDSGGGDDDAEAIWTE--HAQGSHDREIPSHGPDAPAKGTLRRGG--VVDSSN--HDPVEGGVGGVGXGSD-------GNRRDPGEEEESQPSSSRDVWRPRKKELVEVARRMAPGMNKLGGTARVVKVDPATGLVDVRFVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCQQECEYF---TSRPRATQQGLYLIEERSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRSRASQEEGGDIDDRERGHADSQTRRRHLPQDWDEEGEPVPGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGRRLAVSSSGSDEGTADDAEVPNRRRLGDRSDGSY--------AGSQYDDHGHDHDSDIDLL-YVQPGVRGHGGTLHPRDRRSQRSRG----------RDSSGGGASDTEQDSGLEQGEEEGEGE-MSVSSESGRSGGGDEG-------GVGGAFLQAEGDEDE--LPPDIRDPTRGVKDPGVLQARLEELLKQMEAGDVTKLEEDVAAACRCVESATAPGATSTAALVSSLRADLQDLLDRRDQFGGEGGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGAAALRPAPRLNALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDVEMETGERAAADDKAL-RQLYDRTLAQQLARGGPPVI--GAGGGVAAITGGRSGSAAAGQAEGERSGVREREE-----GRRDFAGRGGXXXXXXXXXXXXXXXXXXPVLMDGVVAAANPRRAALSFDTLFAKTCSATTAAVGMNGSSGRMLEASGVDPCFVAQDTTCGSDGGGGSSGDG-GEIARALGMLPQRMADVEELARSHGLQDEAEAEALAEECCETMAVVGAKLRRTLLRAHSPEAAASPSSLGXXXXXXXXXXXGGQPQHLRPSSSPH-HQEPSSCYSRSGPVATAVRRLAEACAPGQGXXXXXXXDGERDFPGLSLTAAAAAAVRPAENPGLGGGRSALFGACAALHVHLLDWLSLM-TAVEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGFLVDFARRVLLDLLFLFEKRRRLGPARSGS--RRNQAERQQE---QEALL--SKDPSAELLCAVMDTLDGSGASPVTAAAAECAAAPGMVARVLLERVLVVARVHPPEVDPQGVVERLWVGVQRISGTLC 1468
BLAST of mRNA_F-serratus_M_contig1386.2783.1 vs. uniprot
Match: A0A6H5K8X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X1_9PHAE) HSP 1 Score: 163 bits (413), Expect = 1.370e-36 Identity = 157/445 (35.28%), Postives = 193/445 (43.37%), Query Frame = 3
Query: 1116 WHPRKGDLVEVERRMTPGVNKPGGTARVVKVDSSTCAVDVRYVVEGGWERGIDPVYVRPAVLDMSHRRPTLGRCPHCGSLRVDCGQRCEFYLE---SSSRRLLPPTNSSRVGR--NSVLGKGSVDGAGTDQDGRRGEGRRHVRRRRREDYQSRVSDDGEIDLVTRDKGRLQ---RRRHLPEHWDGEGDPASRSDVRGKGE-------------------GG--SESDLSSIGRRFWLMEDDSD-GTLGRK-VRSDLRSGNPTDGLATKSQRQRRSGDARDNTESSTEDDIEAFAVVRDRWNIHSGRRRVFSKSSSGSSGDSDSSRSGGHRNNRHSGASDATGISDTEECSGGEDLSSSSERGVGRQGWRGDTVDTTSGKAARFLMPEGEEAARMLPSDIADPTRGVKDPVQLRRELKIMLHEMEDCAANELEQAVPAACRCVSAA 2357
W P+K +LVEV RR PG+NK GGTARVVKVD +T VDVRYVVEGGWER IDPVYVRPA LDM+ +R T GRC HCGSLRVDC Q CE++ ++ + L S G S LGK +S+ S + D+ R++G RRRHLP+ WD EG+P GG + IG R L DSD GT V + R G+ +DG +G D DI+ VR H G R + S S G DSS GG ++ SG FL EG+E LP DI DPTRGVKDP L+ L+ +L +ME +LE+ V AACRCV +A
Sbjct: 391 WRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCQQECEYFTSRPRATQQGLYLMERSEEDGGPGGSSLGKXXXXXXXXXX---------XXXXXXXXXXRSQASQEEGGDVDDRERGHADSQTRRRHLPQDWDEEGEPVPGXXXXXXXXXXXXXXXXXXXXXXXXXXVGGITAPQQRRRIGLRLALSSSDSDEGTADDAGVPNRRRLGDGSDGSD--------AGSQYDXXXXXXXSDIDLL-YVRPGVRGHGGTLRPRDRRSQRSRG-RDSSVGGGSVTDQESGLEQXXXXXXX--------------XXXXXXXXXXXXXXXXXXVGGAFLQAEGDEDE--LPPDIRDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESA 800
BLAST of mRNA_F-serratus_M_contig1386.2783.1 vs. uniprot
Match: A0A067C220_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C220_SAPPC) HSP 1 Score: 63.5 bits (153), Expect = 3.770e-6 Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 3
Query: 1095 EDRASTEWHPRKGDLVEVERRMTPGVNKPGGTARVVKV--DSSTCAVDVRYVVEGGWERGIDPVYVRPAVLDMSHRRPTLGRCPHCGSLRVDCGQRCEFYLESSSRRLLPPTNSSRVG 1442
ED E + GDLVEVE R PG+NK GG ARV+ V D VDVRY + GG E+ +D YV+P+ + R R + G++ L++++ L P S + G
Sbjct: 63 EDEVGDEDGFKVGDLVEVETRTWPGINKIGGAARVISVYSDGGDTFVDVRYFL-GGSEKRVDVAYVQPSDIHQKRARQRYSRVFFHDEFADEYGRKRRADLDATAELLPKPKRSRKDG 179
BLAST of mRNA_F-serratus_M_contig1386.2783.1 vs. uniprot
Match: T0RV44_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RV44_SAPDV) HSP 1 Score: 60.8 bits (146), Expect = 2.490e-5 Identity = 37/99 (37.37%), Postives = 51/99 (51.52%), Query Frame = 3
Query: 1131 GDLVEVERRMTPGVNKPGGTARVVKV--DSSTCAVDVRYVVEGGWERGIDPVYVRPAVLDMSHRRPTLGRCPHCGSLRVDCGQRCEFYLESSSRRLLPP 1421
GDLVEVE R PG+NK GG ARV+ V D VDVRY + GG E+ +D YV+P+ + R R + G++ L++ +L P
Sbjct: 72 GDLVEVETRTWPGINKIGGAARVISVYSDGGDTFVDVRYFL-GGSEKRVDVAYVQPSDMHQKRARQRYSRVFFHDEFADEYGRKRRADLDAPVEHVLHP 169
BLAST of mRNA_F-serratus_M_contig1386.2783.1 vs. uniprot
Match: K3W7C4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7C4_GLOUD) HSP 1 Score: 54.7 bits (130), Expect = 5.040e-5 Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 3
Query: 1131 GDLVEVERRMTPGVNKPGGTARVVKVDSSTCA-------VDVRYVVEGGWERGIDPVYV 1286
GDLVEVE R PG+NKPGG+ R+V V A DVRYV+ GG+ER I+ YV
Sbjct: 57 GDLVEVESRTWPGINKPGGSGRIVNVHREANANGEEKIFYDVRYVL-GGFERRIESEYV 114 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1386.2783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1386.2783.1 >prot_F-serratus_M_contig1386.2783.1 ID=prot_F-serratus_M_contig1386.2783.1|Name=mRNA_F-serratus_M_contig1386.2783.1|organism=Fucus serratus male|type=polypeptide|length=1241bp MDSGSKKQRHSSMNGDACVGAPKDSAIGGGGQAMEEESHGHAKMHEDVQHback to top mRNA from alignment at F-serratus_M_contig1386:149932..159102- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1386.2783.1 ID=mRNA_F-serratus_M_contig1386.2783.1|Name=mRNA_F-serratus_M_contig1386.2783.1|organism=Fucus serratus male|type=mRNA|length=9171bp|location=Sequence derived from alignment at F-serratus_M_contig1386:149932..159102- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1386:149932..159102- >mRNA_F-serratus_M_contig1386.2783.1 ID=mRNA_F-serratus_M_contig1386.2783.1|Name=mRNA_F-serratus_M_contig1386.2783.1|organism=Fucus serratus male|type=CDS|length=7446bp|location=Sequence derived from alignment at F-serratus_M_contig1386:149932..159102- (Fucus serratus male)back to top |