mRNA_F-serratus_M_contig1383.2773.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1383.2773.1
Unique NamemRNA_F-serratus_M_contig1383.2773.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 4.500e-38
Identity = 89/209 (42.58%), Postives = 119/209 (56.94%), Query Frame = 2 
Query:  107 QMCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIGEPSTCSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGPA 733
             +CSNG+ G++  + CC+A CGTCGG GC   G   GL  D+CC   I D    C  +  APC++  D +C SNG+ GI+    CC+AEC  CGG+GC       GL + +CC   I   G  C V+  APC + +   CSNG+ G++ G ACC+ +CG CGG GC       GL AD+CC+  I +    C  + TAPCI+D   GPA
Sbjct: 2754 DVCSNGIPGIQTGNACCLAECGTCGGRGCAEYGG--GLGEDNCCQSEIEDFGELCSVTMEAPCVV--DDVC-SNGIPGIQTGNACCLAECGGCGGTGCAQLGG--GLGADNCCMSEIEDFGELCSVTMEAPCVVDD--VCSNGIPGIQTGNACCLAECGGCGGTGC--AQLGGGLGADNCCMSEIEDFGELCSATMTAPCIVDSVSGPA 2951
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.590e-30
Identity = 85/241 (35.27%), Postives = 119/241 (49.38%), Query Frame = 2 
Query:  113 CSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIG---------------------------------------EPSTCSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDG 718
            CSNG+ G+++ + CC+A CG CGGS C + G   GL AD+CC   I +    C  +  APC +  D +C S+G+ GI +   CC+AEC  CGGSGC  +    GL + +CC G I   G  C ++  APC +                                         P  CSNG+ G+++G ACC+ +CG CGG+ C       GL AD+CC+  I+     C ++  APC IDG
Sbjct:  747 CSNGMPGIQSGNACCLAECGACGGSDCDAFGG--GLGADNCCESDIVEHGELCSIALEAPCYL--DDVC-SDGIPGIRSGNACCLAECGACGGSGC--DEFGGGLGADNCCEGNIEEHGELCSITLEAPCVVDGRLVADTVPCPSCLMVCLSEHGLTLPPSLFRISSRYSSLPPDMCSNGIPGIQSGSACCLAECGACGGLDC--DEFGGGLGADNCCVSDIVEHGELCSIALEAPCYIDG 978
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.400e-29
Identity = 80/220 (36.36%), Postives = 107/220 (48.64%), Query Frame = 2 
Query:  101 TAQMCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIGEPST-----------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCI 709
            T  MC  G+ G++ SDVCC A CG+CGG+GC  R    G     CC G +R +  YC  +G APC+  +  +C   G+ GI+   VCC A C  C G+GC       G     CC G + +SG  C V+G APC  G   T                 C  G+ G++    CC   CG+CGG GC +R   +G     CC G +  S  +C V+  APC+
Sbjct:   42 TVSMCDGGIVGIQTSDVCCSASCGSCGGTGCSGRDGGSGA----CCGGGVRASGRYCSVTGEAPCM--TVPMC-DGGIVGIQASDVCCSASCGSCAGTGCSGRDGGSGA----CCGGGVQASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQTSDVCCSASCGSCGGTGCSSRDGGSGA----CCGGGVRASGRYCSVTGEAPCM 246
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 6.690e-28
Identity = 83/246 (33.74%), Postives = 113/246 (45.93%), Query Frame = 2 
Query:  110 MCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGS----------------DSICISNGLSGIENDGVCCVAECPQCGGSGC-----GSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIGEPST-----------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGPA 733
            MC  G+ G++ SDVCC A CG+CGGSGC  R       ++ CC G +R +  YC  +G APC+ G                 +      G+ GI++  VCC A C  CGGSGC     GSE+         CC G + +SG  C ++G APC  G   T                 C  G+ G+++   CC   CG+CGG GC  R   +    + CC G +  S  +C V+  APC+      PA
Sbjct:  157 MCDGGIVGIQTSDVCCSASCGSCGGSGCTGRDGG----SESCCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCTGRDGGSES---------CCGGGVRASGRYCSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCSGRDGGS----ESCCGGGVRGSGRYCSVTGEAPCMTGAAPTPA 385
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 1.520e-27
Identity = 95/238 (39.92%), Postives = 114/238 (47.90%), Query Frame = 2 
Query:   95 SNTAQMCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICI----------SNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNI-GEPSTCS------------NGVF---GVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGP 730
            S+     S G DG+   DVCC A CGTCGGSGCGSR    GLTA++CC   I  ANV C   G+APC++  D+             S    G+     CC A C +CGGSGC       GL+ +DCC   I +    C V+G APC + G+ S               +G F   GV  G  CC   C  CGG GC  R    GLT  DCC   I N    C V+  APCI+DG   P
Sbjct:   78 SSPTPASSGGCDGILQGDVCCSAECGTCGGSGCGSR---AGLTANECCTSTIAAANVPC---GSAPCVVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGG--GLTGADCCTSDISNL---CSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRG--GGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSP 299
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.590e-26
Identity = 81/227 (35.68%), Postives = 115/227 (50.66%), Query Frame = 2 
Query:  110 MCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIGEPST-----------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIIDGPCGPALT 739
            MC   + G+++SDVCC A CG+CGGSGC  R       ++ CC G +R +  YC  +G APC+  +  +C  + + GI++  VCC A C  CGGSGC    +  G S S CC G + +SG  C ++G APC  G   T                 C   + G+++   CC   CG+CGG GC  R   +    + CC G +  S  +C ++  APC+     GPA T
Sbjct:    1 MCDGDIVGIQSSDVCCSASCGSCGGSGCTGRDGG----SESCCGGGVRASGRYCSITGEAPCM--TVPMCDGD-IVGIQSSDVCCSASCGSCGGSGC---TERDGGSES-CCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSSDVCCSASCGSCGGSGCTERDGGS----ESCCGGGVRASGRYCSITGEAPCMT----GPAPT 208
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.100e-23
Identity = 80/229 (34.93%), Postives = 100/229 (43.67%), Query Frame = 2 
Query:  113 CSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIGEPST----------------------------CSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADDCCIGRILNSNVFCDVSDTAPCIID 715
            CSNGL G+E   VCC   CGTCGG+GCGSR    GLT  DCC   I++ N  C  +  APC+I  ++       +G+    +CC A C  CGG+GC       GLS  +CC   I ++   CD    APC +   S                                   GV  G  CC   CGTCGG GCG R        D CC      S   C V+  +PC++D
Sbjct:   24 CSNGLSGLEKGGVCCPVECGTCGGTGCGSR---PGLTKYDCCTSTIKEDNHLCSVTKEAPCVIDEETEADPTCSNGVAKGDICCSAGCGYCGGTGCAGRG---GLSGDECCTSKIAAANKSCDDQ-SAPCVMSGNSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSCGGVAKGAYCCNAGCGTCGGTGCGMR-------GDGCCTSDAALS--LCSVTGMSPCLMD 236
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 7.490e-18
Identity = 56/159 (35.22%), Postives = 78/159 (49.06%), Query Frame = 2 
Query:   92 ISNTAQMCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDS------------------ICISNGLSGIENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIGE 514
            ++    +CSNG+ GV++   CC+A CG CGGSGC   G   GL   +CC G I +    C     APC++ + +                  +C SNG  GI++   CC+AEC +CGG GCG      GL +  CC   I   G  C ++  APC I +
Sbjct:   28 VTEPTDVCSNGIPGVQSGVSCCLAECGGCGGSGCAELGG--GLGEHNCCEGEIEEFGELCSIKLEAPCVVDASAPAPSPVAEPVAPVTEPTDVC-SNGFPGIQSGVSCCLAECGECGGRGCGEFGG--GLGADKCCESDIEEYGELCSIALAAPCYIDD 181
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.400e-15
Identity = 60/160 (37.50%), Postives = 75/160 (46.88%), Query Frame = 2 
Query:  104 AQMCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSI-----------------CISNGLSGIENDGVCCVAECPQCGGSGC-----GSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPCNIGEP 517
            A MC  G+ G++ SDVCC A CG+C GSGC  R        D CC G +R +  +C  +G APCI G                     C   G+ GI+   VCC   C  CGGSGC     GS+A         CC G + +SG  C V+G APC +  P
Sbjct:  394 APMCDGGIIGIQTSDVCCSASCGSCXGSGCSGRDGG----PDACCGGGVRASGRFCSVTGEAPCITGPAPTPXXXXXXXXXXTIEVPEC-DGGIVGIQASDVCCSLSCGSCGGSGCSGRDGGSDA---------CCGGGVRASGRFCSVTGEAPCLVTVP 539
[Close]
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Match: A0A6H5K3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y1_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.370e-11
Identity = 52/152 (34.21%), Postives = 70/152 (46.05%), Query Frame = 2 
Query:  110 MCSNGLDGVENSDVCCVAGCGTCGGSGCGSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGS----------------DSICISNGLSGIENDGVCCVAECPQ-----CGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGMAPC 502
            MC   + G++ SDVCC A CG+CGGSGC  R       +D CC G +R +  +C  +G APC+ G                 +      G+ GI+   VCC A C       C G   G +A         CC G + +SG+ C V+G APC
Sbjct:  260 MCDGEIVGIQASDVCCSASCGSCGGSGCSGRDGG----SDACCGGGVRASGRFCSVTGEAPCMTGPAPTTEPTXXXXXXXTVEVPMCDGGIVGIQASDVCCSASCGSXXXXXCTGRDGGPDA---------CCGGGVRASGLLCSVTGEAPC 398
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1383.2773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ68_ECTSI4.500e-3842.58WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JG29_9PHAE2.590e-3035.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U7_ECTSI1.400e-2936.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4E0_ECTSI6.690e-2833.74N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7FWE8_ECTSI1.520e-2739.92Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JTV1_9PHAE1.590e-2635.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JNF5_9PHAE1.100e-2334.93MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FJ69_ECTSI7.490e-1835.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWJ0_9PHAE1.400e-1537.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Y1_9PHAE2.370e-1134.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1383contigF-serratus_M_contig1383:77617..82291 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score170.2
Seed ortholog evalue1.9e-39
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
EC2.7.7.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Exons6
Model size2685
Cds size1227
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1383.2773.1prot_F-serratus_M_contig1383.2773.1Fucus serratus malepolypeptideF-serratus_M_contig1383 79032..82248 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929361.74678-UTR-F-serratus_M_contig1383:77616..790311622929361.74678-UTR-F-serratus_M_contig1383:77616..79031Fucus serratus maleUTRF-serratus_M_contig1383 77617..79031 -
1690962816.323866-UTR-F-serratus_M_contig1383:77616..790311690962816.323866-UTR-F-serratus_M_contig1383:77616..79031Fucus serratus maleUTRF-serratus_M_contig1383 77617..79031 -
1622929361.8645923-UTR-F-serratus_M_contig1383:82248..822911622929361.8645923-UTR-F-serratus_M_contig1383:82248..82291Fucus serratus maleUTRF-serratus_M_contig1383 82249..82291 -
1690962816.4066455-UTR-F-serratus_M_contig1383:82248..822911690962816.4066455-UTR-F-serratus_M_contig1383:82248..82291Fucus serratus maleUTRF-serratus_M_contig1383 82249..82291 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929361.762677-CDS-F-serratus_M_contig1383:79031..794691622929361.762677-CDS-F-serratus_M_contig1383:79031..79469Fucus serratus maleCDSF-serratus_M_contig1383 79032..79469 -
1690962816.3341553-CDS-F-serratus_M_contig1383:79031..794691690962816.3341553-CDS-F-serratus_M_contig1383:79031..79469Fucus serratus maleCDSF-serratus_M_contig1383 79032..79469 -
1622929361.7762148-CDS-F-serratus_M_contig1383:79699..798151622929361.7762148-CDS-F-serratus_M_contig1383:79699..79815Fucus serratus maleCDSF-serratus_M_contig1383 79700..79815 -
1690962816.3485465-CDS-F-serratus_M_contig1383:79699..798151690962816.3485465-CDS-F-serratus_M_contig1383:79699..79815Fucus serratus maleCDSF-serratus_M_contig1383 79700..79815 -
1622929361.788999-CDS-F-serratus_M_contig1383:80208..804091622929361.788999-CDS-F-serratus_M_contig1383:80208..80409Fucus serratus maleCDSF-serratus_M_contig1383 80209..80409 -
1690962816.3640423-CDS-F-serratus_M_contig1383:80208..804091690962816.3640423-CDS-F-serratus_M_contig1383:80208..80409Fucus serratus maleCDSF-serratus_M_contig1383 80209..80409 -
1622929361.8079655-CDS-F-serratus_M_contig1383:81006..812131622929361.8079655-CDS-F-serratus_M_contig1383:81006..81213Fucus serratus maleCDSF-serratus_M_contig1383 81007..81213 -
1690962816.373356-CDS-F-serratus_M_contig1383:81006..812131690962816.373356-CDS-F-serratus_M_contig1383:81006..81213Fucus serratus maleCDSF-serratus_M_contig1383 81007..81213 -
1622929361.8292863-CDS-F-serratus_M_contig1383:81831..820351622929361.8292863-CDS-F-serratus_M_contig1383:81831..82035Fucus serratus maleCDSF-serratus_M_contig1383 81832..82035 -
1690962816.3859205-CDS-F-serratus_M_contig1383:81831..820351690962816.3859205-CDS-F-serratus_M_contig1383:81831..82035Fucus serratus maleCDSF-serratus_M_contig1383 81832..82035 -
1622929361.8492153-CDS-F-serratus_M_contig1383:82187..822481622929361.8492153-CDS-F-serratus_M_contig1383:82187..82248Fucus serratus maleCDSF-serratus_M_contig1383 82188..82248 -
1690962816.3974583-CDS-F-serratus_M_contig1383:82187..822481690962816.3974583-CDS-F-serratus_M_contig1383:82187..82248Fucus serratus maleCDSF-serratus_M_contig1383 82188..82248 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1383.2773.1

>prot_F-serratus_M_contig1383.2773.1 ID=prot_F-serratus_M_contig1383.2773.1|Name=mRNA_F-serratus_M_contig1383.2773.1|organism=Fucus serratus male|type=polypeptide|length=409bp
MWSTRWLFVLLGLLMVISNTAQMCSNGLDGVENSDVCCVAGCGTCGGSGC
GSRGQAVGLTADDCCVGRIRDANVYCDDSGAAPCIIGSDSICISNGLSGI
ENDGVCCVAECPQCGGSGCGSEAQSVGLSSSDCCRGPIISSGVDCDVSGM
APCNIGEPSTCSNGVFGVEAGGACCVTQCGTCGGVGCGARATAAGLTADD
CCIGRILNSNVFCDVSDTAPCIIDGPCGPALTITLEWSETDSDLDLYVTE
PGGSVVSFRSMVGDVGFLDMDVRMGPGIETYSIFRFLPTDLTINGAYQFQ
ARRFAGPIDTMWTLTASFIDQVDFSTTGDFQTSASTDIFTVSVTDYDPSC
EDGEDVFAINTRTSTSSPEDKLPNTIPQVPDFPRVGGVIESFDPNLFYPS
RNRMMTSA*
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mRNA from alignment at F-serratus_M_contig1383:77617..82291-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1383.2773.1 ID=mRNA_F-serratus_M_contig1383.2773.1|Name=mRNA_F-serratus_M_contig1383.2773.1|organism=Fucus serratus male|type=mRNA|length=4675bp|location=Sequence derived from alignment at F-serratus_M_contig1383:77617..82291- (Fucus serratus male)
AGCGCAAACCATCCGACAAGCAGAAGAGGGCTTCAATATTACCATGTGGT
CTACGCGATGGCTGTTTGTCCTTTTAGGGCTTCTGATGGTTATCTCTAAC
ACCGGTGAGTCTGCACCAAGAATCTAAGACAGTTTTATCTACTGTAGAAC
TTACGTTGATTTGTTGTGCGCCTGAAGTCACCGCATTCCACAAGCACCGT
CGTTGATTTTTCTCCCGGATTCCCTAACGTTTATCACGGTGGTATCGGAC
AAGCAGCTCAGATGTGCAGCAATGGACTCGACGGCGTCGAGAATTCCGAC
GTGTGCTGCGTGGCTGGGTGCGGCACGTGTGGTGGCTCGGGCTGCGGAAG
CCGGGGCCAGGCTGTCGGCCTAACTGCGGATGACTGTTGTGTTGGACGCA
TCAGGGATGCAAACGTGTATTGCGACGACTCCGGGGCCGCGCCTTGCATC
ATCGGCAGTGGTGAGGGGTTTGGACAGAGTTGGTTGACAGCGACATCCTT
CATCACAAGAGACGCATTTTACATATTCCATGACCATCATAATAGATAAC
GTGCTGCGATCTATCATACCGATCCAGGCACCGTGTGGTCAATGGTCGAC
GCTCAGTGGGGTAGTTAAAGCTCTGTTAAAACAAGGCCATTGAATGTGCG
CCACCACTAGAAAATCCCACTTGCTCGTCCTTACTGTCTATCGCATGGGA
ACCCTCTCTCAAAAACGTAGTGCGAGATAACTTGTTGGCCTGCTTGGTAA
TAGAGCTACTGCCCTAGCCACATAAGTTGGCTTGCTTCAGGCCTAGCATA
AAAGGTCTCACCCGAACATTTCCCGTTTAGCGTTTTTGTACAAGGCATCC
TCAATCCGACTAATAATGAAGACGGGACGAACTATAGCCAGTCTACTACT
AAGTACTGCACCTTGAACGTTGTGAAGCTACATATTAATCGATCGAAAAC
TTGGAACGGGAGCGATTTTGCGCAATTACACCATCATCGTGCTTTTGGTG
CTGCCAATTCAAGTGTTACGTGTATTTGGTAACTTATTTCCCTTTGCTGG
TCTGCTTCTTTGCTCCCCGATCCATCAGATTCGATATGCATTAGTAACGG
CCTCTCCGGCATCGAGAATGACGGAGTATGTTGTGTGGCTGAGTGCCCAC
AATGCGGCGGCTCGGGCTGCGGATCTGAGGCCCAAAGCGTCGGCCTTTCA
TCCAGTGACTGCTGTAGGGGACCCATCATATCCTCTGGCGTGGACTGTGA
TGTATCCGGGATGGCCCCCTGCAACATTGGTGAACGTGTGTGCTTTGCTC
ATAGCTCGACATGCTTTATCGCGCGACAGACAATTTTCAAGTCTTGCCCC
GATGTGTAATGGAGCATGGCGATAGGCATTGCGGGTCCAGGCACCGTGTG
GGTCGGTGTTTACCTCCCGGGTGGAGCGCTAATTTTGTATCGAAAGGGAA
ATAGACGTGACTCGAGAATACGATGTGCTTTTATTTTTATTCTCTCGCAT
GCCCCCCCTCCCCAACCCTTAATCCAGCGCAGTGTCAGGCATGTCATAGA
CCGGCTGAGGGTAAAGTACTCCATTGACACGAAGTTGGTGTTTTTGTCGG
AAAGTGCCCCGAAATGCGTTTCTGCGTTCCTTCGGAGTGGAAAGTCTGGT
TGACGGTTAGGATAGACCCACTGCTCAACCTGCAGGGTACTTTTTTCAGC
TAAGGTCTGCTACTGAAATATCTAAATGGACGTGGGTATTCACGTTTTTT
TCATCAGAGGGCGAACTCTTTTGGCATTCCCTCGGCAAGGGCTGAGTATG
GCTCCTTGGCCCCGCAGCCCGCGCATTCTGCAGAGAGATAGACACCCATC
GTGTTTGCTCCACCTCTGTTGCTCATCACCAGCTTCAACTTGCAGCAACG
GTGTCTTTGGCGTCGAGGCTGGTGGCGCCTGCTGCGTGACTCAGTGCGGG
ACGTGTGGTGGTGTGGGCTGCGGCGCTAGGGCCACGGCTGCCGGGCTTAC
GGCGGACGACTGCTGTATTGGACGCATCCTGAATTCGAATGTGTTCTGCG
ACGTTTCAGACACAGCACCGTGCATCATCGATGGTGAGCGTTTTGGGCTC
GTTCTTCTTATATCAACGGGTTGGAACATCGCAAGAGGCACTCTTTACTT
CATAGCCCTGCTGTTGACGACGCGTTTCGATCGACCATACCGATCTGGGC
GCTGGGCTGCTATTGAATTTACGTGTAGCACAAAGCAGTGTCGCTACCGA
CAAGTGTTTCGTTGACGTCGTCGCTGAAAACACATCTCTTCTTTACATCT
GAATATACTCTTTGGCCAACAGTTTGACAAACGGACCAGGCGACCCTTGC
TCACCCCCAAGGTTATCTTGACCAAATTATCAGAGGCAAGTTGCATAGTG
CGTGCAACATATAGAGTACAATATGCAAGGTATCTCACTTTTACCACCCT
GATGTCATTTGTGTGCGGCTTCGCAGGACCGTGCGGGCCTGCGCTCACCA
TCACCTTGGAATGGTCAGAGACCGACAGCGATCTCGATCTCTACGTGACG
GAGCCCGGTGGCTCGGTTGTCAGTTTTAGGAGCATGGTGGGGGTAAGTGC
ACAATTCAATAGCGCCTGTCTGAGGCGTGTTCGGCTTTATTAGGGGTAGC
CGCCGCTATCTCGACTCTCTCGGAGCAGAAGTATTTAAGGAGTGGAGTCC
TCAGGCTGTGACTGAAAAAAATAAGTCAATAACCTTGAATGGCCTCCATA
GTCGACGCTGACCCCTCATCTTCGCCTCGTGTTGTTATATAACGCTCCAT
CCTGATCGCCCTCTGCTTCAAGGACGTTGGATTCCTCGACATGGACGTCA
GAATGGGTCCCGGCATAGAAACCTACTCCATCTTTCGCTTCCTTCCTACC
GACCTCACTATAAACGGGGCATACCAGTTCCAGGCAAGGCGCTTTGCCGG
TCCCATCGATACGATGTGGACTCTTACCGCTAGCTTTATCGATCAAGTTG
ACTTTTCCACTACTGGTGACTTCCAGACGTCCGCTTCTACCGACATCTTC
ACCGTTTCTGTCACCGACTATGATCCCTCCTGCGAAGATGGCGAGGACGT
CTTTGCCATTAATACTAGGACCTCAACGTCATCTCCCGAAGATAAACTCC
CTAATACTATACCCCAAGTCCCAGACTTCCCGCGGGTGGGGGGCGTTATT
GAAAGCTTTGACCCCAATTTGTTTTACCCATCAAGAAATAGGATGATGAC
TAGCGCATAAGGCTGGGGATGGAGATACTTAAGCTAAGAAGGGGGGATAA
GGCGGGGGGGGGTAATATGTGCATCTTTTTGGCATAATCATTTAGTTTAG
AGCGTGTGGTACAGTGTACCCAGGCATATACGATGAAGATTATAGCCGAA
GGATATCGCTCACGCATGATGTCTGGTTCTTAGGACACATCTGAACTTTT
AGACATTTGGGTTGCAATCTTCATGGAACGTACAGAAGAGTGGGACTTGA
ATAGTATCCGGACCATCATCGCCTGGTCCGACTAGGTTAAGTGTTTGCTT
GATTTCAAGATTCGTCATAGAATGGAACGCGGCAGAAAACTTGAGAGCGC
ACGAGTAACCATTTGAACGCTGGCAAGCATAGAGTGACGTCAAAATAAAT
TTCAATTGGTATCCACCAGTGGTAAACTTACCGTATACCGGCGGCACAGG
TCATCGCCGCGAAGTAAATACTTGCCCACCCCGTGTGCCCTCAGGGACTG
CTAAGCTTGGTTGGGGTACTGAGACTCACGTCGAGTACCAATAAGCGAAT
ACATTTTCATTTTCTAAGTAATCACGGGAGTAGGTACAGTGCTGTTTCGA
CGCTGTAAGAGTATGGTAAAACGCTTACACGGCAAGCCGCAAAACTCGTT
TTCGGGAGATATCAATGCTCAGAGTCGATTTTCATGGTCATGAAAGCATT
ACACGCTCATGCAAGGTTCTTTGTCGGGTGTTATCGACGCCTTAGGTACT
CAAGTTAGACGCTTCCAAAGTCGAACTTTAGCTTTGAGCGGCAAAAGTAC
ATTCTCCAGCATCTCGCCACAGAGTTAGCGCAGGTTCAAAGGTAGAAGAT
CAAACTCGAACTTCCAGGGTACAAACAGGTCGCTTTTGTTCGTATCGCTA
CTCTGGCTGACGCTTTGCCCCTTCAGCCAAGATAGTGACGACTATTTCGG
GTGACGGCAACGGATAATTGTATACGAATGGTAGCCAGGGCTGCAGCTGC
GTAATATACCTCCTTGCGGTGCAAAATGCTAGGGCTCCACGGAAAGTGGC
ACAATGGAAGCACAGAAAACACGCACGAGACAAATCTAACAGCTGGGTTT
GGTTGTTGAGAATCACTCACGGGTTTCAATGGCCAGGTATCGGGAAATTA
GATGCCTCGCCCAGCAATAAATTACCGATAACGAGGGGCAGACGACGTAA
AATCTTGCGTTTCAGGATGGGCCACCAGGACCACAGTCGGACACATCTTA
CCGGCGTGACTCAAAGACGCCGCATCATGCCCGACGTACCCCTTTGTTCA
ATTCCTAGACCCACACGCTGAACGAAGAGTTTTGAAGAGAGCCCTGCAGG
CGCGAATGAAGAACTTTATCGCATCGGATATATTGCATAGAAGCGGGGAT
TGGGGGGTAAGGAGGGTAGAGAGGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1383:77617..82291-

>mRNA_F-serratus_M_contig1383.2773.1 ID=mRNA_F-serratus_M_contig1383.2773.1|Name=mRNA_F-serratus_M_contig1383.2773.1|organism=Fucus serratus male|type=CDS|length=2454bp|location=Sequence derived from alignment at F-serratus_M_contig1383:77617..82291- (Fucus serratus male)
ATGTGGTCTACGCGATGGCTGTTTGTCCTTTTAGGGCTTCTGATGGTTAT
CTCTAACACCGATGTGGTCTACGCGATGGCTGTTTGTCCTTTTAGGGCTT
CTGATGGTTATCTCTAACACCGCTCAGATGTGCAGCAATGGACTCGACGG
CGTCGAGAATTCCGACGTGTGCTGCGTGGCTGGGTGCGGCACGTGTGGTG
GCTCGGGCTGCGGAAGCCGGGGCCAGGCTGTCGGCCTAACTGCGGATGAC
TGTTGTGTTGGACGCATCAGGGATGCAAACGTGTATTGCGACGACTCCGG
GGCCGCGCCTTGCATCATCGGCAGTGCTCAGATGTGCAGCAATGGACTCG
ACGGCGTCGAGAATTCCGACGTGTGCTGCGTGGCTGGGTGCGGCACGTGT
GGTGGCTCGGGCTGCGGAAGCCGGGGCCAGGCTGTCGGCCTAACTGCGGA
TGACTGTTGTGTTGGACGCATCAGGGATGCAAACGTGTATTGCGACGACT
CCGGGGCCGCGCCTTGCATCATCGGCAGTGATTCGATATGCATTAGTAAC
GGCCTCTCCGGCATCGAGAATGACGGAGTATGTTGTGTGGCTGAGTGCCC
ACAATGCGGCGGCTCGGGCTGCGGATCTGAGGCCCAAAGCGTCGGCCTTT
CATCCAGTGACTGCTGTAGGGGACCCATCATATCCTCTGGCGTGGACTGT
GATGTATCCGGGATGGCCCCCTGCAACATTGGTGAACATTCGATATGCAT
TAGTAACGGCCTCTCCGGCATCGAGAATGACGGAGTATGTTGTGTGGCTG
AGTGCCCACAATGCGGCGGCTCGGGCTGCGGATCTGAGGCCCAAAGCGTC
GGCCTTTCATCCAGTGACTGCTGTAGGGGACCCATCATATCCTCTGGCGT
GGACTGTGATGTATCCGGGATGGCCCCCTGCAACATTGGTGAACCTTCAA
CTTGCAGCAACGGTGTCTTTGGCGTCGAGGCTGGTGGCGCCTGCTGCGTG
ACTCAGTGCGGGACGTGTGGTGGTGTGGGCTGCGGCGCTAGGGCCACGGC
TGCCGGGCTTACGGCGGACGACTGCTGTATTGGACGCATCCTGAATTCGA
ATGTGTTCTGCGACGTTTCAGACACAGCACCGTGCATCATCGATGCTTCA
ACTTGCAGCAACGGTGTCTTTGGCGTCGAGGCTGGTGGCGCCTGCTGCGT
GACTCAGTGCGGGACGTGTGGTGGTGTGGGCTGCGGCGCTAGGGCCACGG
CTGCCGGGCTTACGGCGGACGACTGCTGTATTGGACGCATCCTGAATTCG
AATGTGTTCTGCGACGTTTCAGACACAGCACCGTGCATCATCGATGGACC
GTGCGGGCCTGCGCTCACCATCACCTTGGAATGGTCAGAGACCGACAGCG
ATCTCGATCTCTACGTGACGGAGCCCGGTGGCTCGGTTGTCAGTTTTAGG
AGCATGGTGGGGGACCGTGCGGGCCTGCGCTCACCATCACCTTGGAATGG
TCAGAGACCGACAGCGATCTCGATCTCTACGTGACGGAGCCCGGTGGCTC
GGTTGTCAGTTTTAGGAGCATGGTGGGGGACGTTGGATTCCTCGACATGG
ACGTCAGAATGGGTCCCGGCATAGAAACCTACTCCATCTTTCGCTTCCTT
CCTACCGACCTCACTATAAACGGGGCATACCAGTTCCAGGCAAGGCGCTT
TGCCGGTCCCATCGATACGATGTGGACTCTTACCGCTAGCTTTATCGATC
AAGTTGACTTTTCCACTACTGGTGACTTCCAGACGTCCGCTTCTACCGAC
ATCTTCACCGTTTCTGTCACCGACTATGATCCCTCCTGCGAAGATGGCGA
GGACGTCTTTGCCATTAATACTAGGACCTCAACGTCATCTCCCGAAGATA
AACTCCCTAATACTATACCCCAAGTCCCAGACTTCCCGCGGGTGGGGGGC
GTTATTGAAAGCTTTGACCCCAATTTGTTTTACCCATCAAGAAATAGGAT
GATGACTAGCGCATAAGACGTTGGATTCCTCGACATGGACGTCAGAATGG
GTCCCGGCATAGAAACCTACTCCATCTTTCGCTTCCTTCCTACCGACCTC
ACTATAAACGGGGCATACCAGTTCCAGGCAAGGCGCTTTGCCGGTCCCAT
CGATACGATGTGGACTCTTACCGCTAGCTTTATCGATCAAGTTGACTTTT
CCACTACTGGTGACTTCCAGACGTCCGCTTCTACCGACATCTTCACCGTT
TCTGTCACCGACTATGATCCCTCCTGCGAAGATGGCGAGGACGTCTTTGC
CATTAATACTAGGACCTCAACGTCATCTCCCGAAGATAAACTCCCTAATA
CTATACCCCAAGTCCCAGACTTCCCGCGGGTGGGGGGCGTTATTGAAAGC
TTTGACCCCAATTTGTTTTACCCATCAAGAAATAGGATGATGACTAGCGC
ATAA
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