mRNA_F-serratus_M_contig138.2753.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.180e-21 Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 1
Query: 4 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKC----VRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
K TD + + K R F+++GG M S+GGN Y +I DDCTR+ V F+K KS+ AA +ADY + ++ C R D GGE +G F R I E TPP+TP+YNGV ERA
Sbjct: 184 KSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADY---RAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERA 301
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5JM30_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM30_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 2.410e-18 Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 4 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQ-KLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
K T + K R ++D+GG M S+GGN Y +I DD +R+ V F+K KS+ L +ADY T + R D GGE +G F R I E TPP TP+YNGV ERA
Sbjct: 635 KSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGLEKFLADYRTKGVPCEVYIARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERA 752
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KAM7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM7_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 4.280e-18 Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 4 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKCV-RADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
K T + K R ++D+GG M S+GGN Y +I DD +R+ V F+K KS+ +ADY T C+ R D GGE +G F R I E TPP TP+YNGV ERA
Sbjct: 11 KSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTKGVPCEVCIARTDGGGEFQGQFAELCRRHGIKEEFTPPHTPKYNGVAERA 128
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KKB4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB4_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 8.120e-17 Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 67 MNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKC----VRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
M S+GGN Y +I DDCTR+ V F+K KS+ AA +ADY + ++ C R D GGE +G F R I E TPP+TP+YNGV ERA
Sbjct: 1 MQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEPYLADY---RAETVPCEVFVARTDGGGEFQGQFAEVCRRYGIKQEFTPPNTPKYNGVAERA 97
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5JIN8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN8_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 2.400e-16 Identity = 50/120 (41.67%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 4 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYIT---PQKLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
K T + K R ++D+GG M S+GGN Y +I DDC+R+ V F S+ +ADY T P K+ I R D GGE +G F R I E TPP TP+YNGV ERA
Sbjct: 389 KSTSTRAVKKLFRVYLDLGGKMKTRSIGGNWYTLIIRDDCSRWTCVFFFNH-SDAAVGFEKSLADYRTKGVPCKVYI--ARTDGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERA 505
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5JAQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ2_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 2.550e-16 Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 40 RFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKC----VRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
R ++D+ G M S+GGN Y +I DD +R+ V F+K KS+ +ADY T + C RAD GGE +G F R I E TPP TP+YNGV ERA
Sbjct: 702 RVYLDLEGTMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTN---GVPCEDFIARADGGGEFQGQFAEVCRRHGIKQEFTPPHTPKYNGVAERA 807
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A8J6DA37_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6DA37_9ROSI) HSP 1 Score: 83.2 bits (204), Expect = 3.370e-16 Identity = 48/118 (40.68%), Postives = 60/118 (50.85%), Query Frame = 1
Query: 1 PKKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKCVRADNGGELEGA-FQRELDRRSITHEHTPPDTPQYNGVTER 351
P T + S K + DV GPM SL GN Y ++F+DDCTR+ V F+K KS + A T IK +R+DNG E A FQ I H+ T TPQ NGV+ER
Sbjct: 37 PTNTSWRASTKLELVHTDVCGPMRTESLSGNRYFILFIDDCTRYCWVYFLKHKSEVVQVFMKFKAAVETETGCKIKTIRSDNGTEYTSAQFQALCKDAGIKHQLTNVYTPQQNGVSER 154
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KPZ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPZ8_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 6.200e-16 Identity = 49/120 (40.83%), Postives = 62/120 (51.67%), Query Frame = 1
Query: 4 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYIT---PQKLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
K T + K R ++D+GG M S+GGN Y +I DD +R+ V F+K KS+ +ADY T P K+ I R D GGE +G F R I E TPP TP Y V ERA
Sbjct: 471 KSTSSRAVTKIFRVYLDLGGKMKTRSIGGNWYTLIIRDDFSRWTRVFFLKHKSDAAVGFEKFLADYRTEGVPCKVYI--ARTDGGGEFQGQFAEVCRRHGIKQELTPPHTPIYKDVAERA 588
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A8J5YZW8_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YZW8_9ROSI) HSP 1 Score: 81.6 bits (200), Expect = 1.180e-15 Identity = 47/118 (39.83%), Postives = 60/118 (50.85%), Query Frame = 1
Query: 1 PKKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQKLSIKCVRADNGGELEGA-FQRELDRRSITHEHTPPDTPQYNGVTER 351
P T + S K + DV GPM SL GN Y ++F+DDCTR+ + F+K KS + A T IK +R+DNG E A FQ I H+ T TPQ NGV+ER
Sbjct: 169 PTNTTWRASSKLELVHTDVCGPMRTESLSGNRYFILFIDDCTRYCWIYFLKHKSEVAQVFIKFKAAVETETGCKIKTIRSDNGTEYTSAQFQSLCKDAGIKHQLTNVYTPQQNGVSER 286
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Match: A0A6H5KGJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ8_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.350e-15 Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 4 KKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSNTTAALLSLIADYITPQ-KLSIKCVRADNGGELEGAFQRELDRRSITHEHTPPDTPQYNGVTERA 354
K T + K R ++D+GG M S+G + Y ++ DD +R+ V F+K KS+ + DY T + + R D+GGE +G F R I E TPP TP+YN V ERA
Sbjct: 205 KSTSTRADKKLFRVYLDLGGKMKTRSIGDHWYTLMIRDDFSRWTRVFFLKHKSDAAVGFEKFLVDYRTKEVPCEVYITRTDDGGEFQGQFAEVFRRHGIKQEFTPPHTPKYNDVAERA 322 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig138.2753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig138.2753.1 >prot_F-serratus_M_contig138.2753.1 ID=prot_F-serratus_M_contig138.2753.1|Name=mRNA_F-serratus_M_contig138.2753.1|organism=Fucus serratus male|type=polypeptide|length=118bp PKKTDEQLSVKGQRFFVDVGGPMNHSSLGGNSYVVIFVDDCTRFKVVKFVback to top mRNA from alignment at F-serratus_M_contig138:343917..344270+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig138.2753.1 ID=mRNA_F-serratus_M_contig138.2753.1|Name=mRNA_F-serratus_M_contig138.2753.1|organism=Fucus serratus male|type=mRNA|length=354bp|location=Sequence derived from alignment at F-serratus_M_contig138:343917..344270+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig138:343917..344270+ >mRNA_F-serratus_M_contig138.2753.1 ID=mRNA_F-serratus_M_contig138.2753.1|Name=mRNA_F-serratus_M_contig138.2753.1|organism=Fucus serratus male|type=CDS|length=708bp|location=Sequence derived from alignment at F-serratus_M_contig138:343917..344270+ (Fucus serratus male)back to top |