mRNA_F-serratus_M_contig1370.2730.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI) HSP 1 Score: 286 bits (731), Expect = 4.710e-80 Identity = 214/701 (30.53%), Postives = 339/701 (48.36%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLKL--------SIKCIRTDNGGEFEGE-FQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFVGIPRN------FSTGTVSVLLVRSRNVVERQAVQWIDGPRKTGSDGTGSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEGEALH-------------------------CFWPPIKAEEEDGVEDVLACDDGSQMAMQATLDVPEPRNRRQ-------DEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEFQEFP--GAVGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMFDVK--KEAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
DV GPMK GG +Y + F DD +R+ + K KS++ + SIK +R+D GGE+ E F L I + PPGTPQ+NGV+ER R L + +M D +N LW A+ A + NK T + + +PYE+W G P H++ +G Y ++ ++ K+ + +KC F+G P+ + V + R +ER+ + GS G E L E +++T E E E E E+ + + L+ PT+ A P ++ E ++ P ++ D L ++ + + +P+N + ++W++A E+E+ M N V+ V KD IG K +YK+ +G DGKVE YK RLVA+G+ Q +G+ Y E SP SIR+LLA AA D E+ D + AFL ++ E++Y+ PE + V +L ++IYG QA R WN +F + F + + CV+ + G + +V++VDDIL D M G L ++F +KD+G+A Y +G I R+ R L Q +Y+++++K ++++ K +P +GV TLS+ D P+ PEE+E M + PY AVGA+M+T T TRPD+A A+ R+
Sbjct: 359 DVCGPMKIQAKGGYSYFITFTDDMSRYGFLYLMKHKSESFEMFKRFRSEVEKQTGNSIKVLRSDRGGEYLSENFIDYLRENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPVN-----LWGYALEAAAYLLNKIPTKTVST--TPYEIWKGRKPNLKHIKVWGCPAYVKK-LQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLA-------EGSHGKEIE--------LDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQSPTIVA---PEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSNRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQILDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEDVYMTQPEGYTSMSDHNKVCKLRRSIYGLKQASRSWNIHFNKTIEKFDFVKCEEEPCVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRY 1031
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1) HSP 1 Score: 282 bits (721), Expect = 1.150e-79 Identity = 208/671 (31.00%), Postives = 323/671 (48.14%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLK--------LSIKCIRTDNGGEF-EGEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFVGIPRN------FSTGTVSVLLVRSRNVVERQAVQWIDGPRKTGSDGTG--SEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEGEALHCFWPPIKAEEEDGVEDVLACDDGSQMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEFQEFPGA--VGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMF--DVKKEAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
DV GPM GG YV+ DD +R+ V K KS+T + IK +R+D GGE+ EF L +C I + PPGTPQ NGV+ER R L + +M D ++ W A+ A N++ + S +PYELWFG P + L+ +G Y ++ ++ K+ PK EKCVF+G P+ + + + ++ + +E++ + RK D + G TQ + E T+E +D+ E + LRR ++ A + P+ +++ D+G + + P+ D+W +A ++E+ M EN V+ P D+ I K ++K+ DG V YK RLVA+G+ QV+GV Y E SP S+R++LA AA D E+ D + AFL + EE+Y+ PE F + A V +L ++IYG VQA R WN F + + A GF Q +CV+ KV G + ++++VDDIL D ++ A L + F +KD+G+A Y +G I R+ R + Q Y++ ++K F D K+ +P GV LS A P E++E+M PY A+G++M+ TRPD+ AV V R+
Sbjct: 173 DVCGPMSVEARGGYRYVLTLTDDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMMSLTDLPLS-----FWGYALETATFTLNRAPSKSVET--TPYELWFGKKPKLSFLKVWGCDAYVKK-LQPEKLEPKSEKCVFIGYPKETIGYTFYLRSEGKIFVAKNGSFLEKEFLSKEVSGRKVELDEVLPLEPENGATQENVPEVPAPTREEVNDDDHE----------------TSDQVATELRR--STRTRSAPEWYGNPVL--------EIMLLDNGEPSNYEEAMAGPDS-----DKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMDQSKKGFLPVLQGV-QLSTAQCPTTAEDREKMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRY 802
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 275 bits (704), Expect = 3.730e-76 Identity = 201/673 (29.87%), Postives = 323/673 (47.99%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLKLS--------IKCIRTDNGGEF-EGEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFVGIPRN------FSTGTVSVLLVRSRNVVERQAVQWIDGPRKTGSDGTGS----EDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEGEALHCFWPPIKAEEEDGVEDVLACDDGSQMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEFQEFPGA--VGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMFDVKKEAK--IPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
DV GPM GG YV+ DD +R+ + K KS+T + IKC+R+D GGE+ EF L + I + PPGTPQ NGV+ER R L + +M D ++ W A+ N++ + S +PYELWF P + L+ +G Y ++ ++ K+ PK EKCVF+G P+ + + ++ + +E++ + RK D + ++ TQ + T+E +D+ E AS + E + +R A + P+ +++ D+G + + P+ ++W +A ++E+ M EN V+ V P ++ I K ++K+ +G V YK RLVA+GF Q++GV Y E SP S+R++LA AA D E+ D + AFL ++ EE+Y+ PE F + GA V +L ++IYG VQA R WN F + + A GF Q +C++ KV G + +V++VDDIL D ++ A L + F +KD+G+A Y +G I R+ R + Q Y++ ++K F+++ K +P G+ LSK P ++E+M PY AVG+LM+ TRPDI + V R+
Sbjct: 501 DVCGPMNVEARGGYRYVLTLTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENQRDRKIKCLRSDRGGEYLSHEFGTHLRKYGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMMSLTDLPLS-----FWGYALETTAFTLNRAPSKSVET--TPYELWFSKKPKLSFLKVWGCDAYVKK-LQPEKLEPKAEKCVFIGYPKETIGYTFYLRSEGKTFVAKNGSFLEKEFLSKEVSGRKVELDEVITPPLEQESSATQEVVPVVPTPTEEEVNDDDHE----------ASDQVTTEPRRSTRVRS--------APEWYGNPVM--------EIMLLDNGEPSNYEEAMAGPDS-----NKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKKV-SGSSVAFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGFLPVLQGM-RLSKTQSPTTAADREKMSSVPYASAVGSLMYAMLCTRPDINLVISLVGRY 1132
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: UPI001EFFA561 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001EFFA561) HSP 1 Score: 272 bits (696), Expect = 9.940e-76 Identity = 214/687 (31.15%), Postives = 321/687 (46.72%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLKLSI--------KCIRTDNGGEFEGEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREH-KMAPKGEKCVFVGIPRN-FST---GTVSVLLVRSRNVV--ERQAVQWIDGPRK---TGSDGT---------------GSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEGEALHCFWPPIKAEEEDGVEDVLACDDGSQMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEFQEF--PGAVGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMFDVK--KEAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
D+ GPMK LGG Y V F+DDC+R V K K + S+ KCIRTDNGGE+ G F I H+ PP TPQ NG+AER R L E+ L+ E +P W +A+L A V N S T + +G P ++W+G + +HLR FG + E K+ K +C+FVG + F + LVRSR++V E Q ++ I+ K + SDG G +DR E Q + + D + + + P + P+ + + + E +L D G + ++ + + +W +A + EM + EN Y+ V PK + K ++K + + + +YK RLV +GF Q KG+ + E SP +SIR +L AA+ + E+ D + AFL D+ EEIY+E PE F+ V +L K++YG QA R W F M G+++ ++ CVF + ++++++VDD+L KD + +D EL + F +KD+G A+ +G ITR R++ Q Y+E +++ F++K K P AS + LSK P EEKE M K PY VG+LM+ TRPDIA AV V RF
Sbjct: 251 DLCGPMKTKTLGGALYFVTFIDDCSRKLWVYVLKTKDQVLGVFKQFQASVERETGKKLKCIRTDNGGEYCGPFDEYCKHQGIRHQKTPPKTPQLNGLAERMNRTLMERVRCLLSEA----KLPNS-FWGEALLTAAHVINLSPTVAL-QGDVPNKVWYGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFVGYGLDEFGYRLYDPIEKKLVRSRDIVFMENQTIEDIEKAEKLESSSSDGVVHIDEVPHASVHDVGGLDDRDEAQDHVQDQHVDI------------------DNNNDGVINDPPAHEVVDEPNIPLRRSTRQ----RVPSSRYSSNEYMLLTDGGEPECYKEAME-----DEHRGQWIEAMQDEMKSLHENHTYELVKLPKGMKALKNKWVFKVKIEEHTQKPRYKARLVVKGFGQRKGIDFDEIFSPVVKMSSIRTVLGLAASLNLEIEQMDVKTAFLHGDLEEEIYMEQPEGFKVKGKENFVCKLKKSLYGLKQAPRQWYKKFEFVMGEQGYKKTSSDHCVFVQKFSDNDFIILLLYVDDMLIVGKDTSKIDELKNELCKSFSMKDLGHAKQILGMRITRLRDERKIYLSQKKYIERVLERFNMKNAKPVSTPLASHM-KLSKKMCPTTKEEKENMAKIPYSSVVGSLMYAMVCTRPDIAHAVGVVSRF 903
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: A0A8J6D8V3_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8V3_9ROSI) HSP 1 Score: 273 bits (699), Expect = 3.430e-75 Identity = 216/682 (31.67%), Postives = 324/682 (47.51%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLKLSI--------KCIRTDNGGEFEGEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREH-KMAPKGEKCVFVGIPRNFSTG-----TVSVLLVRSRNVV--ERQAVQWIDGPRKTGSDGTGSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRP-HTSVEGEALHCFWPP---IKAEEED--------GVEDVLACDDGSQMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEF--QEFPGAVGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMF--DVKKEAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
DV GP+K GG Y V F+DDC+R V K K+ + S+ KCIRTDNGGE+ G F R I H+ PP TPQ NG+AER R L E+ L+ + +PR WA+A+ V N S + +G P +WFG + +HLR FG + E K+ K +C+F+G + G V LVRSR+VV E Q + ID K S +G D + A + D ++D+ G S + + P + +V + PP ++ D E VL D G + + ++ +D+W +A + E+ + EN ++ V P+ K + + +Y+ + +YK RLV +G+ Q KGV + E SP +SIR +L+ AA D E+ D + AFL D+ EE+Y+E PE F Q V RL K++YG QA R W F M G+++ ++ CVF K G ++++++VDD+L ++ + ++ EL + F +KD+G A+ +G +TR+ KA++L Q Y+E +++ F D K P A LS P +EKEEM+K PY AVG+LM+ TRPD+A AV V RF
Sbjct: 1236 DVCGPIKVRSHGGALYFVTFIDDCSRKLWVYTLKSKNQVFEVFKQFQASVERETRKKLKCIRTDNGGEYTGLFHEYCLRQGIRHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDA----KLPRS-FWAEALNTVAHVINLSPSVPL-QGDVPDRVWFGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFIGYGLDGEFGYRLYDPVQKKLVRSRDVVFIEDQTIDDIDKTEKVDSQDSG--DLIDVNPAPLDSSPDP----IQDD------------VHGDVSDDHQDIGDFDTPMNDAVNDQQQEPIAPPAVPLRRSSRDRRSSVRYSSDEYVLLTDGGEPECYEEAM-----KSECKDQWVEAMKDELQSLHENHTFELVKLPEGKRALKNRWVYRLKQEEKSSSLRYKARLVVKGYAQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKTAFLHGDLEEELYMEQPEGFVLQGKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSDHCVFVKRFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQRFSMDKAKAVNTPFAMHF-RLSVKHSPSTEKEKEEMQKIPYSSAVGSLMYAMVCTRPDLAYAVGTVSRF 1887
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: A0A446P200_TRITD (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A446P200_TRITD) HSP 1 Score: 265 bits (677), Expect = 1.530e-72 Identity = 206/683 (30.16%), Postives = 312/683 (45.68%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLKLS--------IKCIRTDNGGEFEG-EFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFVGIPRN------FSTGTVSVLLVRSRNVVERQAVQWIDGPRKTGSDGTGSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEGEALHCFWPPIKAEEEDGVED-----VLACDD--GSQMAMQATLDVPEPRNRRQD-------EWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEFQEFPGA--VGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMF--DVKKEAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
DV GPM G Y + F DD +R+ + K KS+T + IK +R D GGE+ EF L C I + PPGTPQ NGV+ER R L + ++ + + N+P W A+ A N++ + S +PYELWFG P + L+ +G Y ++ ++ K+ PK EKCVF+G P+ + + + N +E++ + RK D E L+ +S + TVS P + H + ++D E V + + G+ + LD EP N + +W +A ++EM M EN V+ V P D+ I K ++K+ DG V YK RLVA+GF QV+GV Y E P S+R++LA AA D E+ D + AFL + EE+Y+ E F + GA V +L ++IYG VQA R WN F + A GF Q +C++ KV G + ++++VDDIL D +D L + F +KD+G+A Y +G I R+ R + Q YV+ ++K F D K+ + GV LS+ P E++E+MK PY A+G++M+ TRPD+ A+ R+
Sbjct: 502 DVCGPMNVEARAGYRYFLTFTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENHRNKKIKFLRPDRGGEYLSYEFGVHLKNCGIVSQLTPPGTPQRNGVSERRNRTLLD----MVRSMISLTNLPLS-FWGYALETAAFTLNRAPSKSVE--MTPYELWFGKKPKLSFLKVWGCDAYVKK-LQPDKLEPKSEKCVFIGYPKETIGYTFYHKSEGKTFVAKFGNFLEKEFLSKEVSGRKVELD-----------------EVTVPSPLLK------------------SSTSQKTVSVTPTPVNEEANDNDH------ETSDQDTTEPRRSTRVRSAPEWYGNPVLEVMLLDHDEPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGVDYDETFLPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQLEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAFGFIQTFGEACIYKKV-SGSSVAFLILYVDDILLIGNDIKFLDSIKGYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYVDKILKKFKMDQAKKGFLHVLQGV-KLSQTQCPTTAEDREKMKDVPYASAIGSIMYAMLCTRPDVCLAISLAGRY 1133
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: A0A151UC72_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UC72_CAJCA) HSP 1 Score: 264 bits (674), Expect = 3.560e-72 Identity = 203/666 (30.48%), Postives = 318/666 (47.75%), Query Frame = 1
Query: 16 MKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLKL--------SIKCIRTDNGGEFEGEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREH-KMAPKGEKCVFVGIPRN-FST---GTVSVLLVRSRNVV--ERQAVQWIDGPRKTGSDGTGSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEG-EALHCFWPPIKAEEEDGVEDVLACDDGSQMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEFQEFPGA---VGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMFDVKK--EAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
M +GG Y V F+DD +R + K K A IKC+R+DNGGE+ G F+ + I E PP TPQ NG+AER R + E+ ++ +P+ W +A++ D+ N + + G P E+W G + NHL+ FG + E K+ K ++C+++ P++ F ++ +VRSR+VV E Q ++ I K R T+ +HE + + E ++ + ++ + E P S+L P E W + E V+ D+G + + + ++ ++EWRKA + EM + EN Y+ V PK + + K +Y+ + +YK RLV +GF Q KG+ + E SP +SIR++L AA +D E+ D + AFL D+ EEIY+E PE F+ PG V RL K++YG QA R W F M F++ +++ CVF K ++++++VDD+L +D+ + +L + F +KD+G A+ +G ITR+ R L Q Y+E +++ F++ K P A G LS P + E EEMKK PY VG+LM+ TRPDIA AV V RF
Sbjct: 476 MSEKSIGGALYFVTFIDDHSRKVWLHLLKSKDQVLDAFKEFHALVERETGRKIKCVRSDNGGEYRGPFETYCKKHGIRLEKTPPKTPQLNGLAERMNRTIEERVRCVLSHA----KLPK-LFWGEAIMAVVDIVNLTPSVPLG-GAIPDEVWTGKRASYNHLKVFGCRAFVHIPKDERAKLDAKTKECIYLRSPKDEFGYRLWDPINKKVVRSRDVVFFEDQTIEDIKNSEKPRL-------RKSTELTPVQHENNETHQDNDPEEDEPVLEQSNQETHDEPAQEDPQSSSLPAPEPRRSSRERRPSTWYNTE-------EYVMLTDEGEPQSYKEAI-----KDIHKEEWRKAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFK-VPGKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDFLILLLYVDDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKVLEQFNMDKCKPVNTPLA-GHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIAYAVGVVSRF 1114
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: UPI001F373689 (DDE-type integrase/transposase/recombinase n=4 Tax=Terrabacteria group TaxID=1783272 RepID=UPI001F373689) HSP 1 Score: 263 bits (672), Expect = 4.860e-72 Identity = 211/671 (31.45%), Postives = 311/671 (46.35%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDT--------TAAVLSLKLSIKCIRTDNGGEFE-GEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFVGIPRNFSTGTV------SVLLVRSRNVVERQAVQWIDGPRKTGSDGTGSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEGEALHCFWPPIKAEEEDGVEDVLACDDGSQMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEF----QEFPGAVGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMFDV--KKEAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
DV GPM GG Y + F DD +R+ V ++KS+ A L L IK +R+D GGE+ GEF+ L + I + PGTPQ NGVAER R L + +M I+ W A+ A + N + S + ++P E+W G P+ H+ +G Y + K+ P+ E C F+G P+ G VL+ +E + ++ G T E ET + + + + R G + RP G + + ED VED + D+ A D+ D W++A ++E+ + N V++ V P+ IG K +YKR G DGKVE +K RLVA+G+ Q +G+ Y E SP SIR+LLA A D E+ D + AFL ++E IY+ PE F QE V +L K+IYG QA R WN F + + GF+Q CV+ K G A +V++VDDIL D M L +F++KD+G+A Y +G + R+ K + L Q Y+E ++ +++ K+ +P+ GVP LS+ P+ PEE E M++ PY AVG+LM+ TRPDI AV V R+
Sbjct: 418 DVCGPMNKLARGGYEYFITFTDDYSRYGYVYLMRRKSEAFDKFKQFKAEAELQLGKHIKALRSDRGGEYLLGEFKEYLTQHGIVSQLSAPGTPQQNGVAERRNRTLLDMVRSMMSHATLPIS-----FWGYALEAAAYILN--LVPSKSVPRTPQEMWTGRKPSLRHIHIWGCPAYVLND-KATKLEPRSEMCYFIGYPKGTRGGIFYHPKEQKVLISTHARYLEDDCMMH----QELGCKETLEEILSETPATSVPDPEAVENQDIPFNTPEPRRSG-----------------RISRPPDRYLGVS-------FMTDSEDLVEDPTSYDE-------AVTDIDA------DMWQQAMKSELDSLYSNQVWELVDAPEGIKPIGCKWIYKRKRGVDGKVETFKARLVAKGYTQKEGIDYEETFSPVAMLKSIRILLAIACHYDYEIWQMDVKTAFLNGSLDECIYMMQPEGFIAGGQE--NMVCKLKKSIYGLKQASRAWNIKFNQAVKSFGFDQNIDEPCVYKKG-SGNAVAFLVLYVDDILLIGNDVGMMSSTKVWLSSQFQMKDLGEASYVLGIKLLRDRKNKMLALSQSSYIEKILVKYNMHDSKKGLLPSRHGVP-LSRNQCPKTPEEIESMRRVPYASAVGSLMYAMLCTRPDICFAVGMVSRY 1035
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: A0A2N9EZ52_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EZ52_FAGSY) HSP 1 Score: 264 bits (675), Expect = 5.060e-72 Identity = 220/674 (32.64%), Postives = 327/674 (48.52%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTT--------AAVLSLK-LSIKCIRTDNGGEF-EGEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREH-KMAPKGEKCVFVGI-PRNFST---GTVSVLLVRSRNVV--ERQAVQWIDGPRKTGSDGTGSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEA--ASGSASLERPTVSALRRPHTSVEGEALHCFWPPIKAEEEDGVEDVLACDDGSQMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDG-KVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEFQEFPGA---VGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMFDVKKEAKIPAASGVP-TLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
DV GP++ LGGN Y V F+DD +R KV + K D A V K S+KC+RTDNGGE+ EF+ I HE PGTPQ+NGVAER R + EK ++ + +P+ WA+A+ AC + N+S + + P +W G + HL+ FG +A + K+ K C+FVG F ++RSR+VV E + ++ + K+ S G D T + S+ D +E ++E+ ++ E G +A G E+P + P H P + E VL D+G + Q ++ + W KA EM + +N Y+ V PK K + K ++K + +DG K+ KYK RLV +GF Q +G+ + E SP +SIR++L A+ D EL D + AFL D+ EEIY+ PE F E G V RL K++YG QA R W F M G+ + + CV+ + ++++++VDD+L +D + EL + F +KD+G A +G I R+ KA++L Q YVE +++ F++K + G LSK P + +EKE M PY AVG+LM+ TRPDIA AV V RF
Sbjct: 840 DVCGPIEVKSLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVEREKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPGTPQHNGVAERINRTIVEKVRCMLR----MAKLPKS-FWAEAVQTACYLINRSPSVPL-DFDIPERVWTGEDASYAHLKVFGCKTFAHVPKEQRLKLDDKATPCIFVGYGDAEFGYKLWDPKKKKMIRSRDVVFHENENIKDFEKSEKSKSTVEGVSDLTPTSSS-SDIATDIEEVQVENYGDEPAEVDGDDAIDTEGVEQGEQPIPPEMEEPQVRRSTRERH---PSTRYSTS---EYVLITDEGEPESFQEVQS-----HKDKQSWMKAMHEEMDSLHKNNTYELVELPKGKKALRNKWVFK--LKKDGEKLVKYKARLVVKGFNQKQGIDFDEIFSPVVKMSSIRVILGLTASLDLELEQMDVKTAFLHGDLEEEIYMVQPEGF-EAKGKEHKVCRLKKSLYGLKQAPRQWYKKFDSFMVGQGYTRTDVDHCVYVRQFPNGKFIILLLYVDDMLIVGQDANMVGSLKKELFKSFDMKDLGPARQILGMQILRDRKAKKLWLSQEKYVERVLERFNMKHAKPVSTPLGGHFKLSKKSCPSSNKEKENMASIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRF 1491
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF) HSP 1 Score: 262 bits (669), Expect = 1.550e-71 Identity = 216/672 (32.14%), Postives = 321/672 (47.77%), Query Frame = 1
Query: 1 DVGGPMKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTA------AVLSLKLSIKCI---RTDNGGEFE-GEFQRELDRCSITHEHIPPGTPQNNGVAERAFRLLREKTIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGNSPTANHLRPFGAVGYARQSVREH-KMAPKGEKCVFVGIPRN------FSTGTVSVLLVRSRNVVERQAVQWIDGPRKTGSDGTGSEDRGETQGALSEHEKDTQEARLEDEREQEREKGGSEAASGSASLERPTVSALRRPHTSVEGEALHCFWPPIKAEEEDGVEDVLACDDGS-QMAMQATLDVPEPRNRRQDEWRKAEETEMLGMVENCVYKQVARPKDKLVIGTKMLYKRNVGQDGKVEKYKCRLVAQGFWQVKGVHYTEKSSPTPSTASIRMLLATAAAKDGELRHFDAEQAFLKADINEEIYIEIPEEF--QEFPGAVGRLNKAIYGFVQAGRCWNNNFCDDMTAIGFEQAKANSCVFPKVVDGVAEMVVVIHVDDILAHAKDQATMDGFVAELGQKFRLKDMGDAEYYMGCHITRNHKARELKFGQHLYVESLVKMFDVK--KEAKIPAASGVPTLSKADEPRNPEEKEEMKKFPYREAVGALMWTATVTRPDIACAVRAVDRF 1950
D+ GPM GG Y V F+DD +RF V +KS+ AV+ KL KCI R+D GGE+ GEF+ L I + PGTPQ NGVAER R L E ++ + +P + W A+ A + N + S + +PYE+W G P+ + R +G+ + V+E K+ + E VFVG P+ +S V++ + +E + K S E RGE G+ + DT + +A+ +V P S L W + E D V L D + A+Q ++ D W A + EM M N V+ V P IG K +YKR G DGKV+ +K RLVA+G+ Q++G+ Y E SP SIR+LLA AA D E+ D + AFL ++ E+IY++ PE F + V +LN++IYG QA R WN F + + + GF Q CV+ K+ G + +V++VDDIL + + L ++F +KD+G+A + +G + R+ K R L Q Y+++++ F ++ K+ +P G+P LSK P+ +E EEMK PY AVG+LM+ TRPDI+ AV V R+
Sbjct: 494 DLCGPMSIQARGGFEYYVSFIDDYSRFGYVYLLHRKSECFEKFKEYRAVVE-KLHGKCIKSLRSDRGGEYLFGEFRTYLSEAGIESQLTAPGTPQQNGVAERRNRTLME----MVRSMMSYSRLP-DSFWGLALETASYILN--MVPSKSVDTTPYEMWKGRKPSFSQFRVWGSPAHVL--VQEPGKLEKRSEARVFVGYPKGTKGGLFYSPEDQKVIVSTNARFLEEDYIM----NHKPASRLVLEELRGEIDGSPPSAQVDT--------------------SHNTATRHTESVPVQTVPRRSGRVSHLPDRWIGL-GESSDSVPGGLESDPRTYDEALQ---------DKDADSWNVAMKAEMGSMDSNQVWDLVELPDGVRPIGCKWIYKRKRGLDGKVQTFKARLVAKGYTQIEGIDYDETFSPVAMLKSIRILLAVAAHMDYEVWQMDVKTAFLNGNLQEDIYMQQPEGFIAEGREHLVCKLNRSIYGLKQASRSWNIRFDEVIQSYGFTQCPDEHCVYKKI-SGSVVVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHGIP-LSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARY 1119 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1370.2730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1370.2730.1 >prot_F-serratus_M_contig1370.2730.1 ID=prot_F-serratus_M_contig1370.2730.1|Name=mRNA_F-serratus_M_contig1370.2730.1|organism=Fucus serratus male|type=polypeptide|length=645bp MKHSGLGGNNYVVFFVDDCTRFKVVKFAKKKSDTTAAVLSLKLSIKCIRTback to top mRNA from alignment at F-serratus_M_contig1370:234924..237074- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1370.2730.1 ID=mRNA_F-serratus_M_contig1370.2730.1|Name=mRNA_F-serratus_M_contig1370.2730.1|organism=Fucus serratus male|type=mRNA|length=2151bp|location=Sequence derived from alignment at F-serratus_M_contig1370:234924..237074- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1370:234924..237074- >mRNA_F-serratus_M_contig1370.2730.1 ID=mRNA_F-serratus_M_contig1370.2730.1|Name=mRNA_F-serratus_M_contig1370.2730.1|organism=Fucus serratus male|type=CDS|length=3870bp|location=Sequence derived from alignment at F-serratus_M_contig1370:234924..237074- (Fucus serratus male)back to top |