mRNA_F-serratus_M_contig137.2715.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: D8LH69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH69_ECTSI) HSP 1 Score: 291 bits (746), Expect = 4.100e-93 Identity = 181/237 (76.37%), Postives = 190/237 (80.17%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGASRGRDRLQLLLKEQDEVNLEGVKKYDDADDADSGDDLDSSDSXXXXXXXX-ALEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQG-SSSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTAHRPTW AQAAASDVGNWSTGGQASQAVS+ DLPSQT LKFR+TGQNSEAELRKRDVRAEVE+SERRALD+KP TI RR+DEGGA RGRDRLQLLLKEQ +VNL+ VKKYDD D XXXXXXXX ALEKELEKIR X RKQEAAMTGN+LLTQ SSSQ+KRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK
Sbjct: 1 MTTAHRPTWAPAQAAASDVGNWSTGGQASQAVSAHDLPSQTTLKFRKTGQNSEAELRKRDVRAEVEDSERRALDEKPATIARRYDEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXX--RKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 235
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: A0A7S2FJV3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJV3_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.840e-38 Identity = 116/240 (48.33%), Postives = 147/240 (61.25%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRR-FDEGGASRGRDRLQLLLKEQDEVNLEGV-KKYDDADDADSGDDLDSSDSXXXXXXXXA--LEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQGS-SSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTAHRPTWVA + ASD GNWS GG+ S S D+P TKLK R+ Q + R E+E +E +ALD+K R ++ +S + L+ + +EV+ E + +KYDD D XXXXXXXX L++ELEKI+ R +K E EEA + EK +AA+ GN L+ + SSQ+KR+WNDDVVFK QARTEPE KKRFVNDTIRNDFHRRFL K+ K
Sbjct: 1 MTTAHRPTWVAGKGEASDYGNWSLGGKVSGQFSVKDMPGHTKLKMRQGEQIPDFV-----TRDELESAEDKALDEKLKAKKRSALEDSSSSTVLGGAKPLMLKAEEVDTERINRKYDDGDXXXXXXXXXXXXXXXXXXXXXXELLQRELEKIKAEREKVRLEK--EAEEAAIAEKTASDAALLGNPLMLGATKSSQVKRKWNDDVVFKNQARTEPEAKKRFVNDTIRNDFHRRFLAKFAK 233
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: K3WMS3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMS3_GLOUD) HSP 1 Score: 139 bits (349), Expect = 2.230e-34 Identity = 113/242 (46.69%), Postives = 145/242 (59.92%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGASRGRDRLQLLLKEQDEVNLEGVK----KYDDADD-ADSGDDLDSSDSXXXXXXXXALEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQ--GSSSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTAHRPTW AA A++ G W GG S+ S+ DLP+ KLK+R+ GQ + E+ D+RAE+E E + ++K D+ +L LL + + +K KYDDAD+ DS D XXXXXXXX L +ELEKI+ XXXX A +E R + + GN LL Q G S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL+KYI+
Sbjct: 1 MTTAHRPTWHAAVGQANE-GGWQAGGALSEQFSARDLPAHKKLKYRQVGQGTANEVELLDLRAELEGKEEKYEEEKGKKKDTALDKLRRLEENKKLLLLGDSEADARESQLKSIASKYDDADEIGDSDDSSXXXXXXXXXXXXXXLMRELEKIKRXXXXXXXXXXXXXXXASEQESRVE--ILQGNPLLQQSSGGSAKMKRRWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLSKYIQ 239
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: A0A8K1CHA0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHA0_PYTOL) HSP 1 Score: 138 bits (347), Expect = 4.420e-34 Identity = 113/243 (46.50%), Postives = 143/243 (58.85%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGASRGRDRLQLLLKEQDEVNLEGVK----KYDDADDADSGDDLDSSDSXXXXXXXXA-LEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQGSSS---QLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTAHRPTW AA ++ G W +GGQ SQ S+ DLP TKLK R+ GQ + E+ RD+RAE+E E++ ++K + D+ +L LL + + +K KYDDADD XXXXXXXXA L +ELEKI+ XXX EA EK +E + GN L S+S ++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KY++
Sbjct: 1 MTTAHRPTWHAAVGQKNE-GGWQSGGQVSQQFSARDLPGHTKLKIRQVGQGTANEIELRDLRAELEGREQQYEEEKGKSNNTAQDKLRRLEENKKLLLLGDAEADARESQLKSVASKYDDADDVXXXXXXXXXXXXXXXXXXXAELMRELEKIKKEXXXXXXXXXXXXREAA--EKMAREEILQGNPLTQAASASGTAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYVQ 240
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: A0A067BVG0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BVG0_SAPPC) HSP 1 Score: 137 bits (346), Expect = 5.510e-34 Identity = 112/242 (46.28%), Postives = 147/242 (60.74%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGASRGRDRLQLLLK--EQDEVNLEGVKKYDDADDADSGDDLDSSDSXXXXXXXXALE--KELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVL---LTQGSSSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTA RPT+ AA ++ G W++GGQ S S+ DLP TKLK R+ GQ + EL +RD+ E+ + ER+ +DK + F + R +D LLLK E ++ + KYDDADD D GD XXXXXXXX E +ELEKI+ R +K E+ + EEKR ++ + GN L + S+ +KR+WNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL YI+
Sbjct: 1 MTTAARPTFNAAMGKKNE-GGWNSGGQISMQFSARDLPGHTKLKTRQLGQGTSDELAERDLIGELTDRERKYEEDKLKEVD--FAQQKIMRLKDNKTLLLKGDEWEDRAKDVQTKYDDADD-DVGDXXXXXXXXXXXXXXXEAELMRELEKIKREREEERLRK--EQAXXDEEEKRAKDEVLMGNPLTSAMAPAGSATIKRKWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLKAYIQ 236
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: A0A485KPE0_9STRA (Aste57867_10048 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPE0_9STRA) HSP 1 Score: 137 bits (345), Expect = 8.510e-34 Identity = 116/247 (46.96%), Postives = 149/247 (60.32%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGAS--RGRDRLQLLLK--EQDEVNLEGVKKYDDADDADSGDDLDSSDSXXXXXXXXA--LEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQ------GSSSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTA RPTW AA ++ G W+ GGQ S S+ DLP QTKLK R+ GQ + EL +D++ E+ E ER+ ++K G+ D R ++ LLLK E ++ + V KYDDADD D XXXXXXXX L +ELEKI+ XXX K E + EVEE +++E + GN L + S+ +KR+WNDDVVFK Q+R EPETKKRF+NDTIRNDFHRRFL YI+
Sbjct: 1 MTTAARPTWHAAVGQKNE-GGWNAGGQVSMQFSARDLPGQTKLKTRQIGQGTVDELGMKDLKGELSERERKYEEEK----GKEVDTAQQKMLRLKENKMLLLKGDEWEDRAKDVVAKYDDADDDTRQDSXXXXXXXXXXXXXXXXXLMRELEKIKKEXXXXXLXK--EMVDREVEENQRKEEILLGNPLTSAQARNIPSGSATIKRKWNDDVVFKNQSRNEPETKKRFINDTIRNDFHRRFLKTYIQ 240
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: A0A836C8J3_9STRA (Pre-mRNA-splicing factor Cwf15/Cwc15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J3_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.320e-33 Identity = 114/240 (47.50%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGASRGRD----RLQLLLKEQDEVNLEGVKKYDDADDADSGDDLDSSDSXXXXXXXXALEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQG-SSSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTAHRPTW A ++ GNW+TGG + Q S+ D P KLKFR+ GQNSEAEL++RD++ +E E A ++K GR G ++G D XXXXXXX AL+KELEKIR XXXX QEAAM+GNVLL+ S+SQ+KRRWNDDVVFKGQARTEP+ KKRFVNDTIR+DFHR FL KY+K
Sbjct: 1 MTTAHRPTWTPAVGTSNARGNWATGGLSWQ-FSAKDEPGHKKLKFRQLGQNSEAELKRRDLKTVLEAKEENAKEEKRT--GRPAAVHGDAKGGDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALQKELEKIRRXXXXXXXXXXXXXXXXXXXXX--QEAAMSGNVLLSMAQSTSQVKRRWNDDVVFKGQARTEPQVKKRFVNDTIRSDFHRSFLKKYVK 235
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: D0NV69_PHYIT (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=D0NV69_PHYIT) HSP 1 Score: 133 bits (334), Expect = 3.030e-32 Identity = 111/245 (45.31%), Postives = 141/245 (57.55%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFD--EGGASRGRDRLQLLLKEQDEVNL------EGVKKYDDADD-ADSGDDLDSSDSXXXXXXXXALEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQ--GSSSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYI 804
MTTAHRPTW AA S+ G W GG+ S VS+ DLP+ +LK R+ GQ + E+ D+R E+E E + V GR+ D + R + ++LL E + E KY+DADD A S XXXXXXXX L +ELEKI+ R +K E E + E + +E + GN L Q S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KYI
Sbjct: 1 MTTAHRPTWHAA-VGQSNEGGWHAGGKLSDQVSARDLPAHKRLKMRQVGQGTANEVELLDLREELERKEEKY----EVEKGRKKDTAQDKLRRLEENKKILLLGDAEADAKESQLKEVASKYNDADDGAGSEAXXXXXXXXXXXXXXXELMRELEKIKQEREEERLRK--EEEARKTVELQSREEILQGNPLTQQQAAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYI 238
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: A0A7S4AM55_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AM55_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.050e-32 Identity = 110/259 (42.47%), Postives = 149/259 (57.53%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGASRGRDRLQLLLKEQDEVNLEGVKKYDDADDADSGDDLDSSDSXXXXXXXX---------------------ALEKELEKIRXXXXXARKKKACEREEAEVEEKRKQEAAMTGNVLLTQGS---SSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTAHRPTW AA AS+ G WS GG S +S D+P+ TKLKFR+ Q + + ++ ++E++E+ A +K + DE GR +L E DE ++ KYDDAD +D XXXXXXXX AL++EL KIR ++K+ E EEA E++ +EAA+ GN LL GS + +LKRRWN+DVVF+ QA+ EPE KKRF+NDT+RNDFH+RFL K+I+
Sbjct: 1 MTTAHRPTWKAAVGKASE-GGWSAGGAGSGGLSVLDMPAHTKLKFRKGNQVVDRQEALKESLRKLEKAEKEA--NKKLLQRPAVDESVEEEGRLKLLKQTAEVDETAIQS--KYDDADASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALQEELAKIRAEREAEKQKQ--EGEEAARNEEKLEEAALLGNPLLAGGSDDTTGRLKRRWNEDVVFRNQAKDEPEIKKRFINDTVRNDFHKRFLNKFIR 252
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Match: A0A024U4X4_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4X4_9STRA) HSP 1 Score: 132 bits (332), Expect = 6.450e-32 Identity = 108/247 (43.72%), Postives = 140/247 (56.68%), Query Frame = 1
Query: 103 MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQNSEAELRKRDVRAEVEESERRALDDKPVTIGRRFDEGGASRGRDRLQLLLKEQDEVNLEGVKKYDDADDADSGDD------LDSSDSXXXXXXXXALEKELEKIRXXXXXAR-KKKACEREEAEVEEKRKQEAAMTGNVLLTQGS-----SSQLKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 807
MTTA RPTW AA ++ G W++GGQ S S+ DLP+ KLK R+ GQ + EL RD+++E+ E ER+ +K + L E ++ E +YDDADD DD XXXXXXX L +ELEKI+ R KK+A +R+ EE ++E + GN L +Q S S+ +KR+WNDDVVFK Q R EPETKKRF+NDTIRNDFHRRFL YI+
Sbjct: 1 MTTAARPTWNAAVGQKNE-GGWNSGGQVSMQFSARDLPAHKKLKTRQMGQGTVEELEGRDLKSELAERERQYQAEKDKVVDVAXXXXXXXXXXXXXLLKGDEWEDRAKEIQSQYDDADDDTRKDDSGXXXXXXXXXXXXXXXXXAELMRELEKIKKEREEERLKKEAADRD---AEESLRKEEILLGNPLTSQQSKNPTGSATIKRKWNDDVVFKNQTRHEPETKKRFINDTIRNDFHRRFLKTYIQ 243 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig137.2715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig137.2715.1 >prot_F-serratus_M_contig137.2715.1 ID=prot_F-serratus_M_contig137.2715.1|Name=mRNA_F-serratus_M_contig137.2715.1|organism=Fucus serratus male|type=polypeptide|length=236bp MTTAHRPTWVAAQAAASDVGNWSTGGQASQAVSSWDLPSQTKLKFRRTGQback to top mRNA from alignment at F-serratus_M_contig137:311833..320551- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig137.2715.1 ID=mRNA_F-serratus_M_contig137.2715.1|Name=mRNA_F-serratus_M_contig137.2715.1|organism=Fucus serratus male|type=mRNA|length=8719bp|location=Sequence derived from alignment at F-serratus_M_contig137:311833..320551- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig137:311833..320551- >mRNA_F-serratus_M_contig137.2715.1 ID=mRNA_F-serratus_M_contig137.2715.1|Name=mRNA_F-serratus_M_contig137.2715.1|organism=Fucus serratus male|type=CDS|length=1416bp|location=Sequence derived from alignment at F-serratus_M_contig137:311833..320551- (Fucus serratus male)back to top |