mRNA_F-serratus_M_contig1366.2677.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: D7FKB7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB7_ECTSI) HSP 1 Score: 152 bits (383), Expect = 1.910e-38 Identity = 85/231 (36.80%), Postives = 126/231 (54.55%), Query Frame = 1
Query: 28 HSIVLPSSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYD--------RNDQGHVENYFKHKAEPTEDGKPRISMFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFA-DRSVLVHFNFGGTELSV 693
+ ++LP++LVTSFF+ ++D I CL +K A+RNL V +VGGFS PL++ +VR + C V+ PD+AI+RGAV + + +AVFN+R+ARLTYG +D R D G Y + E DG F H+ +G+++P ++Y P + + AS RD F +ED F LG++ PLDM+ +R+ V F FGG EL+V
Sbjct: 448 YMVILPTTLVTSFFTPTLDSIARCLRGIKGGSALRNLHRVFVVGGFSRCPLLMQVVRAELQNASCRVVEVSEPDIAIVRGAVKYFDESAVFNSRRARLTYGASVLHAFDEKNAEHRRRRDAGETLKY-DDRDEVMVDG-----CFFPHIRIGENVPTNGVTSRENYTPVSLENETNCIQVYASSARDPAFVDEDSCFMLGKISFPLDMTKKTRQERAYRVEFTFGGPELTV 672
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: A0A6H5KHR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHR9_9PHAE) HSP 1 Score: 143 bits (360), Expect = 8.300e-38 Identity = 79/227 (34.80%), Postives = 130/227 (57.27%), Query Frame = 1
Query: 25 RHSIVLPSSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAE---PTEDGKPRI-SMFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSV 693
+ ++ LP++LVTSFF+ ++ +I CL+ +K ++ +L V +VGGFS P++ +VR V+ PD+AI++GAV++ N + +FN+RKAR TYG C + ND + + + +A T +GK + + FS ++ GDDIP G + +SYIP + Q +++F + S R+ F +E F++G V LDM+ F R ++ FGG EL V
Sbjct: 58 KFNVTLPTTLVTSFFTPTLQKIAECLQRIKRESSLHDLYRVFVVGGFSRCPMLREVVRTGLDLPAGRVVLVHEPDLAIVKGAVMYFNRSTIFNSRKARYTYGTNCVVPF--NDS--IAEHRRRRAAGMCSTHNGKTCLPNAFSVYIRKGDDIPVGGILKRRSYIPLKNSQQAMSFPVYGSSERNPSFADEKGCFEVGRVSFALDMTKEFEKRGIIGEVTFGGPELIV 280
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE) HSP 1 Score: 147 bits (371), Expect = 3.930e-37 Identity = 83/244 (34.02%), Postives = 135/244 (55.33%), Query Frame = 1
Query: 25 RHSIVLPSSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAE---PTEDGKPRI-SMFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSVTAEDENSGEKRQVVLSL 744
+ ++ LP++LVTSFF ++D+I CL +K ++ +L V +VGGFS P++ +VR V+ PD+AI++GAV++ N + +FN+RKAR TYG C + ND + + + +A T +GK + + FS ++ GDDIP G + +SYIP + Q +++F + S R+ F +E F++G V LDM+ F R ++ FGG EL V D E V+++
Sbjct: 347 KFNVTLPTTLVTSFFEPTLDKIAECLRRIKRESSLHDLYRVFVVGGFSRCPMLREVVRTGLDLPAGRVVLVHEPDLAIVKGAVMYFNRSTIFNSRKARYTYGTNCVVPF--NDS--IAEHRRRRAAGMCATHNGKTCLPNAFSVYIRKGDDIPVGGILKRRSYIPLKNSQQAMSFPVYGSSERNPSFADEKGCFEVGRVSFALDMTKQFEKRGIIGEVTFGGPELIVKILDSEEREMTDGVMTM 586
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI) HSP 1 Score: 143 bits (360), Expect = 1.320e-35 Identity = 80/245 (32.65%), Postives = 130/245 (53.06%), Query Frame = 1
Query: 25 RHSIVLPSSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGH----VENYFKHKAEPTEDGKPRISM-FSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSVTAEDENSGEKRQVVLSL 744
+ ++ LP++LVTSFF+ ++ +I CL +K + +L V +VGGFS P++ ++R V+ PD+AI++GAV++ + + FN+RKAR TYG +D ++ H H DGK +S FS ++ GDDIPEG + + Y P Q+S++F + + R+ F +E+ F++G V PLDM+ F R ++ FGG EL+V D E V+ +
Sbjct: 343 KFNVTLPTTLVTSFFTPTLQKIAECLRRIKRESQLHDLHRVFVVGGFSRCPMLREVIRNGLDLPAGRVVDVHEPDLAIVKGAVMYFDRSTSFNSRKARYTYGTGFAVPFDDSNAEHRRRRAAGLVSHH-----DGKVHVSNGFSIYIRKGDDIPEGGILKRRRYGPLKKSQTSMSFAVYCTSERNPSFADENGCFEVGRVSFPLDMTKEFQKRGIVGEMTFGGPELTVKIVDHEEREITDAVMIM 582
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: A0A8B6CSW2_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6CSW2_MYTGA) HSP 1 Score: 105 bits (262), Expect = 3.520e-22 Identity = 67/227 (29.52%), Postives = 111/227 (48.90%), Query Frame = 1
Query: 46 SSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAEPTEDGKPRIS-MFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSVTAEDENSGEK 723
++++ F+ D I L+D+ N R + +++VGGFS +I ++ F +I +A+++GAVLF +N A +RKA+ TYGV+ + D + K G+ + S +FS+HV +G + G PQSY P S + + S D + E LG++ VPL S D+ ++V FGGTE++V AE++ S +K
Sbjct: 377 NAMIKELFTKVSDSIVQHLKDILNNPVSRGVDTILMVGGFSECAMIQEAIKTNFSH--MKIIIPEDAGLAVVKGAVLFGHNPATIVSRKAKYTYGVKITRDFKEGDPQDKKYQVK--------GRNKCSDVFSKHVEIGQTVKVGESLNPQSYFPLHSDVEEVVVPLYISTDEDPSYTTEPSCNYLGKIVVPLKGS-SVKDKEIVVQMTFGGTEMTVEAEEKKSSKK 592
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: A0A672FAI6_SALFA (Uncharacterized protein n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FAI6_SALFA) HSP 1 Score: 104 bits (260), Expect = 6.080e-22 Identity = 73/249 (29.32%), Postives = 123/249 (49.40%), Query Frame = 1
Query: 1 GVPGVSCWRHSIVLPSSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAEPTEDGKPRISMFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSVTAEDENSGEKRQVVLSLV 747
GV G S + SI + + SFF S+ I L+++ D ++ Y++LVGG+S S + V + + C V+ LRP AI+ GAVLF N AV +RK+ TYGV+ +D + + + E D +F R V + +D+ S++P S Q++++F+ + ++ ++ +E ++G +KV + + DR V + FG TE+ TA DE+SG V L +
Sbjct: 329 GVRGASWYEGSIQISKERMRSFFDDSLRGITNLLKEILKKDF--HIDYILLVGGYSESETLRQHVINQI-KGQCKVLCPLRPQEAIMMGAVLFGRNPAVVASRKSAFTYGVKTIQTFDPSKHREDKKFIADGIEKCGD------LFYRLVEIDEDVGWAE-TRDFSFVPTASTQTAMSFSFFRTERKNPQYVDEWGVEEIGSMKVSMPDTTRGRDRRVKLQIKFGFTEMKATATDEDSGCTESVELDFM 567
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: UPI001E1DC634 (heat shock 70 kDa protein 12A-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC634) HSP 1 Score: 104 bits (260), Expect = 6.350e-22 Identity = 68/237 (28.69%), Postives = 121/237 (51.05%), Query Frame = 1
Query: 40 LPSSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAEPTEDGKPRIS-MFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSVTAEDENSGEKRQVVLSLV 747
+ + + F + D + L+ L + ++++ +++VGGFS SP++ +++R F +I P +A+++GAV+F ++ V R+ ++TYGV+ T Y + H E+ K + GK + MF +HV +G + G +SY+P Q+ +TF++ AS D + + LG + V L S DRSV V FG TEL VTA +E++ +K + +
Sbjct: 362 MEAGVAKGLFKDACDSVARHLKSLFSEGQVKDVQTILMVGGFSESPMLQAVLRNTFPNK--KIIIPADPGLAVLKGAVIFGHDPTVIRERRCKVTYGVQ--TSYPFKEGVHPES----KKFTNDAGKEFCADMFDKHVEIGQAVVCGESQVTRSYVPTKINQTKVTFSVYASTDADPVYTTDPNCTHLGSLTVDLQGSG--LDRSVKVQMTFGDTELHVTAIEEDTQKKSKAKFDFL 588
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: K1P486_CRAGI (Heat shock 70 kDa protein 12A n=3 Tax=Crassostrea TaxID=6564 RepID=K1P486_CRAGI) HSP 1 Score: 103 bits (256), Expect = 2.150e-21 Identity = 69/219 (31.51%), Postives = 115/219 (52.51%), Query Frame = 1
Query: 67 FSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAEPTEDGKPRIS-MFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSVTAEDENSGE 720
FSA+ D + ++ L +R + +++VGGFS SPL+ +RE+F C VI +A+++GAV+F + A R ++ TYG+ T +DR+ H + K +GK + +F +HV++G + +SY P +S Q+ ++ + S I D F +E E LG K+ +D+ +D+ V F FGGTEL V A +++GE
Sbjct: 364 FSAACDGMVDHVKKLLKSPKVRGTNNILMVGGFSESPLLQKRIREEF--PSCRVIIPQEAGLAVLKGAVIFGHQPATIAARISKYTYGISTNTKFDRSK--HPMSKLK-----MVEGKEKCKDVFDKHVSIGQLLEIDDVQSEKSYWPLYSNQTQVSLPVYTSTIEDPSFVDEPECSYLG--KLTVDIPKHGSDKEVSSSFIFGGTELKVQAVVKSTGE 571
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: UPI001457E941 (heat shock 70 kDa protein 12B-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457E941) HSP 1 Score: 102 bits (255), Expect = 2.980e-21 Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 1
Query: 46 SSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAEPTEDGKPRISMFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVPLDMSVPFADRSVLVHFNFGGTELSVTA 699
+S F + + I +E + + + S +++VGGFS SP++ V+++F R VI +++++GAVLF + V +TR + TYG++ + + D + ++ + K + FSRHVA G + G E + YIP Q ++ F + S + + + +G+VKV L M VP ++R VLV FGGTELSV A
Sbjct: 368 ASEAKKLFETACEAIVEHVERIFDQEHAAGTSVILMVGGFSESPMLRYAVKQRFGRSKKIVIPQ-DAGLSVLKGAVLFGFDTKVISTRVMKHTYGIQVLHGFRQGDPENTKDIVEGKVYCND-------RFSRHVARGHSVNIGEATEYRDYIPLTDDQRTLAFKVFTSERDEPTYCETENCTYIGKVKVDLPMDVPKSEREVLVRLRFGGTELSVEA 577
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Match: UPI001E1DCFDD (heat shock 70 kDa protein 12B-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCFDD) HSP 1 Score: 99.8 bits (247), Expect = 4.080e-21 Identity = 68/236 (28.81%), Postives = 117/236 (49.58%), Query Frame = 1
Query: 46 SSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVILVGGFSSSPLILSIVREKFHRDGCTVIAALRPDVAIIRGAVLFVNNAAVFNTRKARLTYGVRCRTLYDRNDQGHVENYFKHKAEPTEDGKPRISMFSRHVAVGDDIPEGSGCEPQSYIPGWSGQSSITFNILASHIRDIRFPNEDEHFKLGEVKVP-LDMSVPFADRSVLVHFNFGGTELSVTAEDENSGEKRQVVLSLVQ 750
+ +V S FS + +I ++ + + A++ +S +++VGGFS SP++ V++ F VI +A+++GAV+F +N++V +R A+ TYG++C ++ + K E T G F + V +G I +SY P GQS + AS +D+ F +E + + G+V V LD VH FGGTEL VTA +GE+ + + ++
Sbjct: 79 ADVVKSLFSDTNKKITNHIKSIFDDQAVKGISAILMVGGFSESPMLRDAVQKTF--SSVRVIIPHEAGLAVLKGAVIFEHNSSVTTSRIAKYTYGMKCYKPFNHSIHPRERRVIKKDGEQTGRG-----CFDKLVEIGQAISPEEPTIGKSYSPT-GGQSGFRIKLYASPRKDLLFVDEPDCIRTGDVTVSCLDKEGRIG--CAAVHLIFGGTELEVTAVYNTTGEQTRALFDFLE 304 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1366.2677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1366.2677.1 >prot_F-serratus_M_contig1366.2677.1 ID=prot_F-serratus_M_contig1366.2677.1|Name=mRNA_F-serratus_M_contig1366.2677.1|organism=Fucus serratus male|type=polypeptide|length=256bp GVPGVSCWRHSIVLPSSLVTSFFSASIDRIRGCLEDLKNIDAIRNLSYVIback to top mRNA from alignment at F-serratus_M_contig1366:169157..169924- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1366.2677.1 ID=mRNA_F-serratus_M_contig1366.2677.1|Name=mRNA_F-serratus_M_contig1366.2677.1|organism=Fucus serratus male|type=mRNA|length=768bp|location=Sequence derived from alignment at F-serratus_M_contig1366:169157..169924- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1366:169157..169924- >mRNA_F-serratus_M_contig1366.2677.1 ID=mRNA_F-serratus_M_contig1366.2677.1|Name=mRNA_F-serratus_M_contig1366.2677.1|organism=Fucus serratus male|type=CDS|length=1536bp|location=Sequence derived from alignment at F-serratus_M_contig1366:169157..169924- (Fucus serratus male)back to top |